Citrus Sinensis ID: 015250

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
ccEEEEEEEcccccccccEEEEEEcccccccccccccccccccEEEEEEEEcccccccccccccccccEEEEEEcccccEEEEEEEccccEEEcccccccccccccccccccccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHccccccccccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccEEEccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEcccccccccccHHHHHHccccccEEEccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccc
ccEEEEEEEcccccccccEEEEEEcccccccEEEcccccccccEEEEEEEEcccccEcccccccccEcEEEEEEcccccEEEEEEEccccEEEcccEEEEEcccccccccccccHHccHHHHHEHHHHHccccccccccccccHccHHHHHHHHHHHccccHHHHEcEEEEEEcccccEEccccccHEccccHHHHHHHHHHHHHHHHHHccccHccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHcEEEEcHHHHccccccHHHcccccccccccccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHcccEEEEcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHccccEEEcc
MSCLVAFAVgqkysvgnGFHIiaahtdspclklkpksassksgYLMVNVQTyggglwhtwfdrdlTVAGRVIvrgsdgsflHKLVkvkrpllrvptlaihldrtvnkdgfkpnletqlipllatkseetsvepkeksstssskvthhpqLMQILSQelgcgtddiASIELnicdtqpsclggannefifsgrldnlassyCGLRALIdscvspsnlsseHAIRMVALFdneevgsdsyqgagapTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVsadmahgvhpnfsekheehhrpemqkgLVIKHNANQRYATSGVTAFLFKEIAklhnlptqefvvrndmgcgstigpilasgvgirtVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRgsdgsflhklvkvkrpllrvptlaihldrtvnkdgfkpnlETQLIPllatkseetsvepkeksstssskvthhPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYesfssidkkLIVDF
MSCLVAFAVGQKYSVGNGFHIIAAHTDspclklkpksassksGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLAtkseetsvepkeksstssskvtHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
*******************************************YLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLL****************************MQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHG********************LVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLI***
MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSE****************VTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATK*********************HPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNF***********MQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETS*************VTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDS*QGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
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MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query410 2.2.26 [Sep-21-2011]
B9RAJ0491 Probable aspartyl aminope N/A no 0.990 0.826 0.579 1e-147
Q54M70484 Aspartyl aminopeptidase O yes no 0.975 0.826 0.505 1e-119
Q9ULA0475 Aspartyl aminopeptidase O yes no 0.982 0.848 0.507 1e-114
Q5RBT2471 Aspartyl aminopeptidase O yes no 0.982 0.855 0.504 1e-114
Q2HJH1471 Aspartyl aminopeptidase O yes no 0.982 0.855 0.502 1e-114
Q9Z2W0473 Aspartyl aminopeptidase O yes no 0.982 0.852 0.504 1e-114
Q2UPZ7498 Aspartyl aminopeptidase O yes no 0.987 0.813 0.476 1e-109
O36014467 Aspartyl aminopeptidase 1 yes no 0.968 0.850 0.461 1e-103
P38821490 Aspartyl aminopeptidase 4 yes no 0.973 0.814 0.437 3e-94
Q19087470 Putative aspartyl aminope yes no 0.956 0.834 0.445 1e-91
>sp|B9RAJ0|DNPEP_RICCO Probable aspartyl aminopeptidase OS=Ricinus communis GN=RCOM_1506700 PE=2 SV=2 Back     alignment and function desciption
 Score =  521 bits (1343), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/428 (57%), Positives = 310/428 (72%), Gaps = 22/428 (5%)

Query: 2   SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWF 61
           S +VAFA+G+KY  GNGF+++ AHTDSPC+KLKP S  +KSGYL V VQ YGGGLWHTWF
Sbjct: 67  STIVAFAIGKKYVAGNGFYVVGAHTDSPCIKLKPVSKVTKSGYLEVGVQPYGGGLWHTWF 126

Query: 62  DRDLTVAGRVIVRGSDG---SFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQL 118
           DRDL VAGRVIVR       S+ H+LV+++ P++RVPTLAIHLDR VN DGFK N ++ L
Sbjct: 127 DRDLAVAGRVIVREEKHGSVSYSHRLVRIEEPIMRVPTLAIHLDRNVNTDGFKVNTQSHL 186

Query: 119 IPLLATK----------------SEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGT 162
           +P+LAT                 ++E +   K    T+++   HH  L+Q+++ ++GC  
Sbjct: 187 LPVLATSVKAELSKVVAENGTVGNDEETDGMKSSKGTTNANSKHHSLLLQMIAGQIGCNG 246

Query: 163 DDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAI 222
            DI   EL  CDTQPS + GA  EFIFSGRLDNL  S+C L+ALID+  S S+L +E  +
Sbjct: 247 SDICDFELQACDTQPSVIAGAAKEFIFSGRLDNLCMSFCSLKALIDATASDSHLENESGV 306

Query: 223 RMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMA 282
           RMVALFD+EEVGSDS QGAG+P MF A+ RI  +   +          I++SFLVSADMA
Sbjct: 307 RMVALFDHEEVGSDSAQGAGSPVMFDALSRITSTFNSD---SKLLRKAIQKSFLVSADMA 363

Query: 283 HGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVR 342
           H +HPN+++KHEE+H+P M  GLVIKHNANQRYAT+ VT+FLFKEIA  HNLP Q+FVVR
Sbjct: 364 HALHPNYADKHEENHQPRMHGGLVIKHNANQRYATNSVTSFLFKEIASKHNLPVQDFVVR 423

Query: 343 NDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSI 402
           NDM CGSTIGPILASGVGIRTVD G  QLSMHS+RE+C  +D+  +Y HFKAF+E FS +
Sbjct: 424 NDMPCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKYSYEHFKAFFEDFSHL 483

Query: 403 DKKLIVDF 410
           D K+ VD 
Sbjct: 484 DSKITVDM 491
Likely to play an important role in intracellular protein and peptide metabolism.
Ricinus communis (taxid: 3988)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 2EC: 1
>sp|Q54M70|DNPEP_DICDI Aspartyl aminopeptidase OS=Dictyostelium discoideum GN=dnpep PE=1 SV=1 Back     alignment and function description
>sp|Q9ULA0|DNPEP_HUMAN Aspartyl aminopeptidase OS=Homo sapiens GN=DNPEP PE=1 SV=1 Back     alignment and function description
>sp|Q5RBT2|DNPEP_PONAB Aspartyl aminopeptidase OS=Pongo abelii GN=DNPEP PE=2 SV=1 Back     alignment and function description
>sp|Q2HJH1|DNPEP_BOVIN Aspartyl aminopeptidase OS=Bos taurus GN=DNPEP PE=1 SV=1 Back     alignment and function description
>sp|Q9Z2W0|DNPEP_MOUSE Aspartyl aminopeptidase OS=Mus musculus GN=Dnpep PE=2 SV=2 Back     alignment and function description
>sp|Q2UPZ7|DNPEP_ASPOR Aspartyl aminopeptidase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=dapA PE=1 SV=1 Back     alignment and function description
>sp|O36014|DNPEP_SCHPO Aspartyl aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aap1 PE=1 SV=1 Back     alignment and function description
>sp|P38821|DNPEP_YEAST Aspartyl aminopeptidase 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE4 PE=1 SV=1 Back     alignment and function description
>sp|Q19087|DNPEP_CAEEL Putative aspartyl aminopeptidase OS=Caenorhabditis elegans GN=F01F1.9 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query410
225464136 535 PREDICTED: aspartyl aminopeptidase [Viti 0.997 0.764 0.853 0.0
224097624462 predicted protein [Populus trichocarpa] 0.995 0.883 0.838 0.0
15238278 526 aspartyl aminopeptidase [Arabidopsis tha 0.992 0.773 0.833 0.0
26452642 526 putative aspartyl aminopeptidase [Arabid 0.992 0.773 0.833 0.0
357442997 550 Aspartyl aminopeptidase [Medicago trunca 0.997 0.743 0.819 0.0
297810563 525 hypothetical protein ARALYDRAFT_487250 [ 0.992 0.775 0.823 0.0
255568036 526 Aspartyl aminopeptidase, putative [Ricin 0.997 0.777 0.816 0.0
449466260 527 PREDICTED: probable aspartyl aminopeptid 0.997 0.776 0.797 0.0
356576295 518 PREDICTED: aspartyl aminopeptidase-like 0.997 0.789 0.798 0.0
357126946 520 PREDICTED: aspartyl aminopeptidase-like 1.0 0.788 0.775 0.0
>gi|225464136|ref|XP_002266672.1| PREDICTED: aspartyl aminopeptidase [Vitis vinifera] gi|296087973|emb|CBI35256.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/409 (85%), Positives = 378/409 (92%)

Query: 1   MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTW 60
           MS LVAFA+G+KYSVGNGFH+IAAHTDSPCLKLKPKSA+SKSGYLMVNVQTYGGGLWHTW
Sbjct: 127 MSSLVAFAIGEKYSVGNGFHVIAAHTDSPCLKLKPKSAASKSGYLMVNVQTYGGGLWHTW 186

Query: 61  FDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIP 120
           FDRDL+VAGRVI++GSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLET LIP
Sbjct: 187 FDRDLSVAGRVILKGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETHLIP 246

Query: 121 LLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCL 180
           LLATK EE S E KEKS++ SSK  HHP LMQ+LS EL CG DDI SIELN+CDTQPSCL
Sbjct: 247 LLATKLEEASSESKEKSTSLSSKTAHHPLLMQVLSDELSCGVDDIMSIELNVCDTQPSCL 306

Query: 181 GGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240
           GG N+EFIFSGRLDNLASSYC LRALIDSC S  +LSSEHAIRMVALFDNEEVGSDS QG
Sbjct: 307 GGGNDEFIFSGRLDNLASSYCALRALIDSCQSTGDLSSEHAIRMVALFDNEEVGSDSVQG 366

Query: 241 AGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPE 300
           AGAPTMFQA+RRI+  L HE+V E +FE  IRQSFLVSADMAHGVHPNF +KHEEHHRPE
Sbjct: 367 AGAPTMFQAMRRIISCLVHEYVGEGAFERAIRQSFLVSADMAHGVHPNFMDKHEEHHRPE 426

Query: 301 MQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVG 360
           +QKGLVIKHNANQRYATSG+TAFLFKE+ ++HNLPTQEFVVRNDMGCGSTIGPILASGVG
Sbjct: 427 LQKGLVIKHNANQRYATSGITAFLFKEVGRIHNLPTQEFVVRNDMGCGSTIGPILASGVG 486

Query: 361 IRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 409
           IRTVDCGIAQLSMHSVRE+CG EDIDIAY+HFKAFY++FSS+D+KL VD
Sbjct: 487 IRTVDCGIAQLSMHSVREVCGKEDIDIAYKHFKAFYQTFSSVDRKLNVD 535

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224097624|ref|XP_002311016.1| predicted protein [Populus trichocarpa] gi|222850836|gb|EEE88383.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15238278|ref|NP_196091.1| aspartyl aminopeptidase [Arabidopsis thaliana] gi|7413533|emb|CAB86013.1| aspartyl aminopeptidase-like protein [Arabidopsis thaliana] gi|9758446|dbj|BAB08975.1| aspartyl aminopeptidase [Arabidopsis thaliana] gi|332003391|gb|AED90774.1| aspartyl aminopeptidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|26452642|dbj|BAC43404.1| putative aspartyl aminopeptidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357442997|ref|XP_003591776.1| Aspartyl aminopeptidase [Medicago truncatula] gi|355480824|gb|AES62027.1| Aspartyl aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297810563|ref|XP_002873165.1| hypothetical protein ARALYDRAFT_487250 [Arabidopsis lyrata subsp. lyrata] gi|297319002|gb|EFH49424.1| hypothetical protein ARALYDRAFT_487250 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255568036|ref|XP_002524995.1| Aspartyl aminopeptidase, putative [Ricinus communis] gi|223535739|gb|EEF37402.1| Aspartyl aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449466260|ref|XP_004150844.1| PREDICTED: probable aspartyl aminopeptidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356576295|ref|XP_003556268.1| PREDICTED: aspartyl aminopeptidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357126946|ref|XP_003565148.1| PREDICTED: aspartyl aminopeptidase-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query410
TAIR|locus:2175423526 AT5G04710 [Arabidopsis thalian 0.992 0.773 0.770 1.5e-170
TAIR|locus:2143990477 AT5G60160 [Arabidopsis thalian 0.985 0.846 0.555 1.7e-121
DICTYBASE|DDB_G0286149484 dnpep "aspartyl aminopeptidase 0.975 0.826 0.482 2e-102
UNIPROTKB|F1PVI2471 DNPEP "Uncharacterized protein 0.982 0.855 0.485 2.5e-97
UNIPROTKB|F1NWA8444 DNPEP "Uncharacterized protein 0.980 0.905 0.476 4.7e-96
UNIPROTKB|Q9ULA0475 DNPEP "Aspartyl aminopeptidase 0.982 0.848 0.480 7.6e-96
RGD|1583848475 Dnpep "aspartyl aminopeptidase 0.982 0.848 0.480 7.6e-96
UNIPROTKB|E7EMB6410 DNPEP "Aspartyl aminopeptidase 0.982 0.982 0.480 1.6e-95
UNIPROTKB|E7ETB3493 DNPEP "Aspartyl aminopeptidase 0.982 0.817 0.480 1.6e-95
UNIPROTKB|Q2HJH1471 DNPEP "Aspartyl aminopeptidase 0.982 0.855 0.475 2e-95
TAIR|locus:2175423 AT5G04710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1658 (588.7 bits), Expect = 1.5e-170, P = 1.5e-170
 Identities = 315/409 (77%), Positives = 345/409 (84%)

Query:     1 MSCLVAFAVGQKYSVGNGFHIIAAHTDXXXXXXXXXXXXXXXGYLMVNVQTYGGGLWHTW 60
             MSCLVAFAVG+KY  GNGFH IAAHTD               GYLMVNVQTYGGGLWHTW
Sbjct:   119 MSCLVAFAVGEKYVPGNGFHAIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTW 178

Query:    61 FDRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIP 120
             FDRDL+VAGR IVR SDGSF+H+LVKVKRPLLRVPTLAIHLDRTVN DGFKPNLETQL+P
Sbjct:   179 FDRDLSVAGRAIVRASDGSFVHRLVKVKRPLLRVPTLAIHLDRTVNSDGFKPNLETQLVP 238

Query:   121 LLAXXXXXXXXXXXXXXXXXXXXXXHHPQLMQILSQELGCGTDDIASIELNICDTQPSCL 180
             LLA                      HHP LMQILS +L C  +DI S+ELNICDTQPSCL
Sbjct:   239 LLATKSDESSAESKDKNVSSKDA--HHPLLMQILSDDLDCKVEDIVSLELNICDTQPSCL 296

Query:   181 GGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240
             GGANNEFIFSGRLDNLASS+C LRALIDSC S  NLS+EH IRM+ALFDNEEVGSDS QG
Sbjct:   297 GGANNEFIFSGRLDNLASSFCALRALIDSCESSENLSTEHDIRMIALFDNEEVGSDSCQG 356

Query:   241 AGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPE 300
             AGAPTMFQA+RRIV SL ++ V+E +F+  IR+SFLVSADMAHGVHPNF++KHEE+HRP+
Sbjct:   357 AGAPTMFQAMRRIVSSLGNKQVTECTFDRAIRKSFLVSADMAHGVHPNFADKHEENHRPQ 416

Query:   301 MQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVG 360
             + KGLVIKHNANQRYATSG+T+FLFKE+AKLH+LP QEFVVRNDMGCGSTIGPILASGVG
Sbjct:   417 LHKGLVIKHNANQRYATSGITSFLFKEVAKLHDLPIQEFVVRNDMGCGSTIGPILASGVG 476

Query:   361 IRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 409
             IRTVDCGIAQLSMHSVREICGT+DIDIAYRHFKAFY SFSS+DKKL+VD
Sbjct:   477 IRTVDCGIAQLSMHSVREICGTDDIDIAYRHFKAFYRSFSSVDKKLVVD 525
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0005773 "vacuole" evidence=ISS
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0009570 "chloroplast stroma" evidence=IDA
TAIR|locus:2143990 AT5G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286149 dnpep "aspartyl aminopeptidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1PVI2 DNPEP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NWA8 DNPEP "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q9ULA0 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1583848 Dnpep "aspartyl aminopeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E7EMB6 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E7ETB3 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q2HJH1 DNPEP "Aspartyl aminopeptidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q88M44APEB_PSEPK3, ., 4, ., 1, 1, ., -0.40040.88290.8438yesno
Q87YC5APEB_PSESM3, ., 4, ., 1, 1, ., -0.39540.89510.8554yesno
P59951APEB_MYCBO3, ., 4, ., 1, 1, ., -0.36110.88780.8406yesno
A5W7K3APEB_PSEP13, ., 4, ., 1, 1, ., -0.40040.88290.8438yesno
Q1IDE6APEB_PSEE43, ., 4, ., 1, 1, ., -0.41050.89510.8554yesno
A4VJG1APEB_PSEU53, ., 4, ., 1, 1, ., -0.40050.89510.8554yesno
Q82F74APEB_STRAW3, ., 4, ., 1, 1, ., -0.36430.89020.8449yesno
C1ALD5APEB_MYCBT3, ., 4, ., 1, 1, ., -0.36110.88780.8406yesno
A1KGT3APEB_MYCBP3, ., 4, ., 1, 1, ., -0.36110.88780.8406yesno
Q3KFM3APEB_PSEPF3, ., 4, ., 1, 1, ., -0.41560.89510.8554yesno
A0PYH7APEB_CLONN3, ., 4, ., 1, 1, ., -0.36520.90.8521yesno
Q50022APEB_MYCLE3, ., 4, ., 1, 1, ., -0.34500.88780.8544yesno
C1DQM8APEB_AZOVD3, ., 4, ., 1, 1, ., -0.39300.88290.8438yesno
Q19087DNPEP_CAEEL3, ., 4, ., 1, 1, ., 2, 10.44580.95600.8340yesno
Q4ZW15APEB_PSEU23, ., 4, ., 1, 1, ., -0.39790.89510.8554yesno
A5U0I9APEB_MYCTA3, ., 4, ., 1, 1, ., -0.35830.89510.8475yesno
O51572APEB_BORBU3, ., 4, ., 1, 1, ., -0.32910.86340.8368yesno
O36014DNPEP_SCHPO3, ., 4, ., 1, 1, ., 2, 10.46130.96820.8501yesno
C3K0D7APEB_PSEFS3, ., 4, ., 1, 1, ., -0.41290.88290.8438yesno
Q02Q78APEB_PSEAB3, ., 4, ., 1, 1, ., -0.40550.89510.8554yesno
B9RAJ0DNPEP_RICCO3, ., 4, ., 1, 1, ., 2, 10.57940.99020.8268N/Ano
Q48L80APEB_PSE143, ., 4, ., 1, 1, ., -0.40300.89510.8554yesno
B0KTU0APEB_PSEPG3, ., 4, ., 1, 1, ., -0.40040.88290.8438yesno
B1J1S3APEB_PSEPW3, ., 4, ., 1, 1, ., -0.40040.88290.8438yesno
Q5RBT2DNPEP_PONAB3, ., 4, ., 1, 1, ., 2, 10.50480.98290.8556yesno
Q9HYZ3APEB_PSEAE3, ., 4, ., 1, 1, ., -0.40300.89510.8554yesno
A4XRN0APEB_PSEMY3, ., 4, ., 1, 1, ., -0.42060.89510.8554yesno
O06634APEB_MYCTU3, ., 4, ., 1, 1, ., -0.35830.89510.8475yesno
B7V7X2APEB_PSEA83, ., 4, ., 1, 1, ., -0.40300.89510.8554yesno
Q9XA76APEB_STRCO3, ., 4, ., 1, 1, ., -0.36360.89510.8495yesno
Q97LF4APEB_CLOAB3, ., 4, ., 1, 1, ., -0.38790.90.8521yesno
Q9ULA0DNPEP_HUMAN3, ., 4, ., 1, 1, ., 2, 10.50730.98290.8484yesno
Q54M70DNPEP_DICDI3, ., 4, ., 1, 1, ., 2, 10.50590.97560.8264yesno
A6V2H4APEB_PSEA73, ., 4, ., 1, 1, ., -0.40300.89510.8554yesno
Q2HJH1DNPEP_BOVIN3, ., 4, ., 1, 1, ., 2, 10.50240.98290.8556yesno
P38821DNPEP_YEAST3, ., 4, ., 1, 1, ., 2, 10.43760.97310.8142yesno
Q9Z2W0DNPEP_MOUSE3, ., 4, ., 1, 1, ., 2, 10.50480.98290.8520yesno
Q2UPZ7DNPEP_ASPOR3, ., 4, ., 1, 1, ., 2, 10.47690.98780.8132yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.210.914
3rd Layer3.4.110.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
cd05658424 cd05658, M18_DAP, M18 Peptidase Aspartyl aminopept 0.0
PTZ00371465 PTZ00371, PTZ00371, aspartyl aminopeptidase; Provi 0.0
PRK02813428 PRK02813, PRK02813, putative aminopeptidase 2; Pro 1e-167
pfam02127425 pfam02127, Peptidase_M18, Aminopeptidase I zinc me 1e-157
COG1362437 COG1362, LAP4, Aspartyl aminopeptidase [Amino acid 1e-152
cd05639427 cd05639, M18, M18 Peptidase aminopeptidase family 1e-132
cd05659443 cd05659, M18_API, M18 Peptidase Aminopeptidase I 9e-41
PRK02256462 PRK02256, PRK02256, putative aminopeptidase 1; Pro 1e-32
cd05656336 cd05656, M42_Frv, M42 Peptidase, Endoglucanases 2e-04
>gnl|CDD|193534 cd05658, M18_DAP, M18 Peptidase Aspartyl aminopeptidase Back     alignment and domain information 
 Score =  613 bits (1583), Expect = 0.0
 Identities = 203/396 (51%), Positives = 260/396 (65%), Gaps = 25/396 (6%)

Query: 2   SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWF 61
           S L+AF VG+KY  GNGF I+ AHTDSPCLKLKP    +  GYL + V+ YGGGL +TWF
Sbjct: 54  SSLIAFTVGEKYKPGNGFRIVGAHTDSPCLKLKPNPEITSEGYLQLGVEVYGGGLLNTWF 113

Query: 62  DRDLTVAGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPL 121
           DRDL++AGRV+V+  DG    KLV + RP+LR+P LAIHL+R VN +GFK N +  L+P+
Sbjct: 114 DRDLSLAGRVVVKDGDGKPESKLVDIDRPILRIPNLAIHLNREVN-EGFKLNKQKHLLPI 172

Query: 122 LATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLG 181
           L    E+                 H   L+ +L++ELG   +DI   +L + DTQP  LG
Sbjct: 173 LGLGEEDEK---------------HEDDLLDLLAEELGVKPEDILDFDLYLYDTQPGALG 217

Query: 182 GANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGA 241
           G N+EFI S RLDNLAS Y  L AL+D+       +    I ++ALFDNEEVGS+S QGA
Sbjct: 218 GLNDEFISSPRLDNLASVYAALEALLDAE------NDNSGINVIALFDNEEVGSESKQGA 271

Query: 242 GAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEM 301
            +P +   + RI  +L     S   +   + +SFL+SADMAH VHPN+ EKH+ +HRP +
Sbjct: 272 DSPFLEDVLERIAAALGG---SREEYYRALARSFLISADMAHAVHPNYPEKHDPNHRPLL 328

Query: 302 QKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGI 361
             G VIK NANQRYAT  V+A +FKE+ +   +P QEFV RNDM CGSTIGPI AS +GI
Sbjct: 329 NGGPVIKINANQRYATDAVSAAVFKELCEKAGVPVQEFVNRNDMPCGSTIGPITASRLGI 388

Query: 362 RTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 397
           RTVD GI QLSMHS+RE  G +D++   R  KAF+E
Sbjct: 389 RTVDIGIPQLSMHSIRETAGVKDVEYLIRLLKAFFE 424

Peptidase M18 family, Aspartyl aminopeptidase (DAP; EC 3.4.11.21) subfamily. DAP is widely distributed in bacteria and eukaryotes, but only the mammalian aspartyl aminopeptidase has been characterized to date. DAP cleaves only unblocked N-terminal acidic amino-acid residues. It is a cytosolic enzyme and is highly conserved; for example, the human enzyme has 51% identity to an aspartyl aminopeptidase-like protein in Arabidopsis thaliana. The mammalian DAP is highly selective for hydrolysis of N-terminal aspartate or glutamate residues from peptides. Unlike glutamyl aminopeptidase (M42), DAP does not cleave simple aminoaryl-arylamide substrates. Although there is lack of understanding of the function of this enzyme, it is thought to act in concert with other aminopeptidases to facilitate protein turnover because of their restricted specificities for the N-terminal aspartic and glutamic acid, which cannot be cleaved by any other aminopeptidases. The mammalian aspartyl aminopeptidase is possibly contributing to the catabolism of peptides, including those produced by the proteasome. It may also trim the N-terminus of peptides that are intended for the MHC class I system. In humans, DAP has been implicated in the the specific function of converting angiotensin II to the vasoactive angiotensin III within the brain. Length = 424
>gnl|CDD|240387 PTZ00371, PTZ00371, aspartyl aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|235073 PRK02813, PRK02813, putative aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|216888 pfam02127, Peptidase_M18, Aminopeptidase I zinc metalloprotease (M18) Back     alignment and domain information
>gnl|CDD|224281 COG1362, LAP4, Aspartyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|193518 cd05639, M18, M18 Peptidase aminopeptidase family Back     alignment and domain information
>gnl|CDD|193535 cd05659, M18_API, M18 Peptidase Aminopeptidase I Back     alignment and domain information
>gnl|CDD|235018 PRK02256, PRK02256, putative aminopeptidase 1; Provisional Back     alignment and domain information
>gnl|CDD|193532 cd05656, M42_Frv, M42 Peptidase, Endoglucanases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 410
KOG2596479 consensus Aminopeptidase I zinc metalloprotease (M 100.0
PTZ00371465 aspartyl aminopeptidase; Provisional 100.0
PRK02813428 putative aminopeptidase 2; Provisional 100.0
PF02127432 Peptidase_M18: Aminopeptidase I zinc metalloprotea 100.0
COG1362437 LAP4 Aspartyl aminopeptidase [Amino acid transport 100.0
PRK02256462 putative aminopeptidase 1; Provisional 100.0
PRK09864356 putative peptidase; Provisional 100.0
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 100.0
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 100.0
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 100.0
PRK09961344 exoaminopeptidase; Provisional 100.0
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 100.0
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 98.63
TIGR01883361 PepT-like peptidase T-like protein. This model rep 98.41
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 97.48
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 97.43
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 97.28
PRK13381404 peptidase T; Provisional 97.01
PRK05469408 peptidase T; Provisional 96.97
PRK12891414 allantoate amidohydrolase; Reviewed 96.66
PRK08554438 peptidase; Reviewed 96.53
PRK07473376 carboxypeptidase; Provisional 96.02
PRK07338402 hypothetical protein; Provisional 95.9
TIGR01882410 peptidase-T peptidase T. This model represents a t 95.87
PRK09290413 allantoate amidohydrolase; Reviewed 95.83
PRK08652347 acetylornithine deacetylase; Provisional 95.82
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 95.72
PRK12890414 allantoate amidohydrolase; Reviewed 95.59
PRK06837427 acetylornithine deacetylase; Provisional 95.53
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 95.39
PRK13983400 diaminopimelate aminotransferase; Provisional 95.35
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 95.32
PRK04443348 acetyl-lysine deacetylase; Provisional 95.07
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 95.07
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 94.82
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 94.49
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 94.35
PRK12893412 allantoate amidohydrolase; Reviewed 94.34
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 94.33
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 94.31
PRK06915422 acetylornithine deacetylase; Validated 94.22
PRK08596421 acetylornithine deacetylase; Validated 93.96
PRK13004399 peptidase; Reviewed 93.84
PRK12892412 allantoate amidohydrolase; Reviewed 93.66
PRK09133472 hypothetical protein; Provisional 93.45
PRK08737364 acetylornithine deacetylase; Provisional 93.15
PRK07318466 dipeptidase PepV; Reviewed 93.13
PRK00466346 acetyl-lysine deacetylase; Validated 92.82
PRK15026 485 aminoacyl-histidine dipeptidase; Provisional 92.71
PRK06446436 hypothetical protein; Provisional 92.38
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 92.01
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 91.82
PRK08596421 acetylornithine deacetylase; Validated 91.43
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 91.29
PRK07906426 hypothetical protein; Provisional 91.09
PRK07079469 hypothetical protein; Provisional 91.04
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 90.92
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 90.8
PRK06133410 glutamate carboxypeptidase; Reviewed 90.73
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 90.6
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 90.6
PRK13381404 peptidase T; Provisional 90.46
PRK08652347 acetylornithine deacetylase; Provisional 90.43
PRK07522385 acetylornithine deacetylase; Provisional 89.65
COG2234435 Iap Predicted aminopeptidases [General function pr 88.72
PRK09104464 hypothetical protein; Validated 88.42
PRK05111383 acetylornithine deacetylase; Provisional 88.22
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 87.77
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 87.25
PRK07205444 hypothetical protein; Provisional 87.17
PRK06915422 acetylornithine deacetylase; Validated 87.08
PRK08201456 hypothetical protein; Provisional 86.95
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 86.81
PRK09104 464 hypothetical protein; Validated 86.42
PRK06133410 glutamate carboxypeptidase; Reviewed 86.35
PRK00466346 acetyl-lysine deacetylase; Validated 85.75
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 85.51
PRK07473376 carboxypeptidase; Provisional 85.39
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 85.33
TIGR01882410 peptidase-T peptidase T. This model represents a t 84.74
PRK07907449 hypothetical protein; Provisional 84.51
PRK08201 456 hypothetical protein; Provisional 84.5
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 84.11
PRK13983400 diaminopimelate aminotransferase; Provisional 83.92
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 83.8
PRK06156520 hypothetical protein; Provisional 83.79
PRK07318 466 dipeptidase PepV; Reviewed 83.25
PRK07205 444 hypothetical protein; Provisional 83.18
PRK07522385 acetylornithine deacetylase; Provisional 82.54
PRK08262486 hypothetical protein; Provisional 82.53
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 81.83
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 81.43
PRK08554 438 peptidase; Reviewed 81.14
PRK05111383 acetylornithine deacetylase; Provisional 80.94
PRK09133 472 hypothetical protein; Provisional 80.45
PRK04443348 acetyl-lysine deacetylase; Provisional 80.27
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 80.23
>KOG2596 consensus Aminopeptidase I zinc metalloprotease (M18) [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3e-101  Score=752.81  Aligned_cols=404  Identities=62%  Similarity=1.006  Sum_probs=378.3

Q ss_pred             CceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEE-CCCCc
Q 015250            1 MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVR-GSDGS   79 (410)
Q Consensus         1 ~gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~-~~~g~   79 (410)
                      +++|+||.+|++|.+++||-+|+||+|+||++|||.|.....||+++.|++|||.+|+|||||+|++||||.|| .++|+
T Consensus        70 ~S~iiAFavG~ky~pgnGf~iigaHtDSpcLrlKP~Sk~s~~gylqVgV~tYGGgiw~tWfDRDLsvaGRvivk~~~~~~  149 (479)
T KOG2596|consen   70 GSSIIAFAVGGKYVPGNGFSIIGAHTDSPCLRLKPVSKRSAEGYLQVGVETYGGGIWHTWFDRDLSVAGRVIVKEAGDGK  149 (479)
T ss_pred             CceEEEEeccCcccCCCceeEEEecCCCcceeecccccccccceEEEEEeecCCccchhhccccccccceEEEEecCCcc
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999 45789


Q ss_pred             eEEEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCcccc---CCccccCCC--CCCccCChhHHHHHH
Q 015250           80 FLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETS---VEPKEKSST--SSSKVTHHPQLMQIL  154 (410)
Q Consensus        80 ~~~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~---~~~~~~~~~--~~~~~~~~~~~~~~~  154 (410)
                      ++++||++++|+..||+|||||+++.| ++|++|.+++|.|++|....+.+   +++++++++  .+++.+|++.|+.++
T Consensus       150 ~~~~LV~v~rPllrIPtLAiHldr~~n-~~f~pn~EtqlvPil~t~~~~~~~~~e~~~~~~~~~~~~~~~~Hhp~Ll~li  228 (479)
T KOG2596|consen  150 LIHRLVDVKRPLLRIPTLAIHLDRDVN-EGFKPNTETQLVPILGTAIPAEEEKTEKPSDDGDKPRNSSKGKHHPVLLGLI  228 (479)
T ss_pred             eeeeeecCCCceeeccceeeecCCccc-ccCCCCccceeeeeecccCchhhhcCCCCCCCCccccccccccccHHHHHHH
Confidence            999999999999999999999999998 67999999999999999875322   233333333  667788999999999


Q ss_pred             HHHcCCCCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC
Q 015250          155 SQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG  234 (410)
Q Consensus       155 a~~~gV~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG  234 (410)
                      |+++|+++.||++|||+++|.||++++|++++||+++|||||.|||++++||..+.+. .++++++.+.++++||+||||
T Consensus       229 ak~lg~~~edIvd~eL~l~Dtq~a~lgG~~~eFiFs~RLDnl~~sF~al~aLi~s~~~-~~l~~e~~ir~valfDnEEvG  307 (479)
T KOG2596|consen  229 AKELGCTPEDIVDFELILYDTQKATLGGANDEFIFSPRLDNLLSSFCALQALIDSAEG-ESLENESGIRMVALFDNEEVG  307 (479)
T ss_pred             HHHhCCCHHHhhheeeeeecCCchhhcCcccceeecccccchhhHHHHHHHHHHHhcC-CCcccCCCeEEEEeccchhhc
Confidence            9999999999999999999999999999999999999999999999999999887543 256667788899999999999


Q ss_pred             cccccccCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCc
Q 015250          235 SDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQR  314 (410)
Q Consensus       235 srga~gA~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~  314 (410)
                      |.+||||.+.|++++|+||..+++.   ....+.+++.+||+||.||+||+||||+++|+++|.|.|++|||||+++|||
T Consensus       308 S~SaQGA~s~~l~~vl~Riss~~~~---~~~~~~~ai~kSflvSADmaHa~hPNy~~kheenH~P~~h~G~vik~naNqr  384 (479)
T KOG2596|consen  308 SDSAQGAGSPFLESVLRRISSLFGS---FPTAFEEAIAKSFLVSADMAHAVHPNYSDKHEENHRPLLHGGPVIKVNANQR  384 (479)
T ss_pred             chhhccCCCccHHHHHHHHHHhcCC---CchHHHHHhhhheeeehhhhhhcCCCchhhhhhccCCccCCCceEEEcCCcc
Confidence            9999999999999999999998874   5678999999999999999999999999999999999999999999999999


Q ss_pred             cccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHH
Q 015250          315 YATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKA  394 (410)
Q Consensus       315 ~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~a  394 (410)
                      |+||....++++++|+++++|+|.++.|||++||+||||+.++++|++|+|+|+|+++|||+||||+.+|++..++|.++
T Consensus       385 yaTn~v~~~l~kevA~~~~vplQ~fvVrNdspcGsTIGPiLAS~~G~RTlDlG~pqLsMHSiRe~~gs~dv~~~~~lFk~  464 (479)
T KOG2596|consen  385 YATNSVGSALVKEVAELAKVPLQDFVVRNDSPCGSTIGPILASKTGIRTLDLGIPQLSMHSIREMCGSKDVEQAVKLFKG  464 (479)
T ss_pred             eeccchhHHHHHHHHHHcCCCceeEEEecCCCCccccchhhhhhcCceeeecCchhhhhHHHHHHhCcccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccccccccccc
Q 015250          395 FYESFSSIDKKLIVD  409 (410)
Q Consensus       395 f~~~~~~~~~~~~~~  409 (410)
                      ||++|..++.++.+|
T Consensus       465 Ff~~f~sv~~~~~vd  479 (479)
T KOG2596|consen  465 FFERFSSVESKLVVD  479 (479)
T ss_pred             HHHHhhHHHHhhccC
Confidence            999999999988775

>PTZ00371 aspartyl aminopeptidase; Provisional Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information
>PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
3var_A496 Crystal Structure Of Dnpep, Znzn Form Length = 496 1e-105
4dyo_A485 Crystal Structure Of Human Aspartyl Aminopeptidase 1e-105
2ijz_A428 Crystal Structure Of Aminopeptidase Length = 428 4e-70
4eme_A571 X-Ray Crystal Structure And Specificity Of The Plas 7e-37
1y7e_A458 The Crystal Structure Of Aminopeptidase I From Borr 5e-18
2glf_A450 Crystal Structure Of Aminipeptidase (m18 Family) Fr 7e-16
2glj_A461 Crystal Structure Of Aminopeptidase I From Clostrid 5e-14
>pdb|3VAR|A Chain A, Crystal Structure Of Dnpep, Znzn Form Length = 496 Back     alignment and structure 
Iteration: 1

 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/410 (47%), Positives = 261/410 (63%), Gaps = 7/410 (1%)
Query: 2   SCLVAFAVGQKYSVGNGFHIIAAHTDXXXXXXXXXXXXXXXGYLMVNVQTYGGGLWHTWF 61
           S ++AFAVG +Y  GNGF +I AHTD               G+  V V+TYGGG+W TWF
Sbjct: 92  STIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQVGFQQVGVETYGGGIWSTWF 151
Query: 62  DRDLTVAGRVIVR-GSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIP 120
           DRDLT+AGRVIV+  + G    +LV V RP+LR+P LAIHL R VN++ F PN+E  L+P
Sbjct: 152 DRDLTLAGRVIVKCPTSGRLEQRLVHVDRPILRIPHLAIHLQRNVNEN-FGPNMEMHLVP 210
Query: 121 LLAXXXXXXXXXXXXXX-XXXXXXXXHHPQLMQILSQELGCGTDDIASIELNICDTQPSC 179
           +LA                       HH  L  +L   LG   +DI  +EL + DTQP+ 
Sbjct: 211 ILATSIQEELEKGTPEPGPLNATDERHHSVLTSLLCAHLGLSPEDILEMELCLADTQPAV 270
Query: 180 LGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239
           LGGA  EFIF+ RLDNL S +C L+ALIDSC +P++L+++  +RM+AL+DNEEVGS+S Q
Sbjct: 271 LGGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQ 330
Query: 240 GAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRP 299
           GA +      +RRI  S  H     T+FE  I +S+++SADMAH VHPN+ +KHEE+HRP
Sbjct: 331 GAQSLLTELVLRRISASPQHL----TAFEEAIPKSYMISADMAHAVHPNYLDKHEENHRP 386
Query: 300 EMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGV 359
              KG VIK N+ QRYA++ V+  L +E+A    +P Q+ +VRND  CG+TIGPILAS +
Sbjct: 387 LFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLMVRNDSPCGTTIGPILASRL 446
Query: 360 GIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 409
           G+R +D G  QL+MHS+RE   T  +      FK F+E F S+ + L+VD
Sbjct: 447 GLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSLSRSLLVD 496
>pdb|4DYO|A Chain A, Crystal Structure Of Human Aspartyl Aminopeptidase (Dnpep) In Complex With Aspartic Acid Hydroxamate Length = 485 Back     alignment and structure
>pdb|2IJZ|A Chain A, Crystal Structure Of Aminopeptidase Length = 428 Back     alignment and structure
>pdb|4EME|A Chain A, X-Ray Crystal Structure And Specificity Of The Plasmodium Falciparum Malaria Aminopeptidase Length = 571 Back     alignment and structure
>pdb|1Y7E|A Chain A, The Crystal Structure Of Aminopeptidase I From Borrelia Burgdorferi B31 Length = 458 Back     alignment and structure
>pdb|2GLF|A Chain A, Crystal Structure Of Aminipeptidase (m18 Family) From Thermotoga Maritima Length = 450 Back     alignment and structure
>pdb|2GLJ|A Chain A, Crystal Structure Of Aminopeptidase I From Clostridium Acetobutylicum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 0.0
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 0.0
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 1e-178
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 1e-176
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 1e-176
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 1e-127
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 2e-41
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1ylo_A348 Hypothetical protein SF2450; structural genomics, 1e-05
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 4e-05
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 5e-05
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 6e-05
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 8e-05
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 9e-05
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 1e-04
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Length = 496 Back     alignment and structure
 Score =  555 bits (1431), Expect = 0.0
 Identities = 205/410 (50%), Positives = 277/410 (67%), Gaps = 7/410 (1%)

Query: 2   SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWF 61
           S ++AFAVG +Y  GNGF +I AHTDSPCL++K +S  S+ G+  V V+TYGGG+W TWF
Sbjct: 92  STIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQVGFQQVGVETYGGGIWSTWF 151

Query: 62  DRDLTVAGRVIVR-GSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIP 120
           DRDLT+AGRVIV+  + G    +LV V RP+LR+P LAIHL R VN+  F PN+E  L+P
Sbjct: 152 DRDLTLAGRVIVKCPTSGRLEQRLVHVDRPILRIPHLAIHLQRNVNE-NFGPNMEMHLVP 210

Query: 121 LLAT-KSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSC 179
           +LAT   EE      E    +++   HH  L  +L   LG   +DI  +EL + DTQP+ 
Sbjct: 211 ILATSIQEELEKGTPEPGPLNATDERHHSVLTSLLCAHLGLSPEDILEMELCLADTQPAV 270

Query: 180 LGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239
           LGGA  EFIF+ RLDNL S +C L+ALIDSC +P++L+++  +RM+AL+DNEEVGS+S Q
Sbjct: 271 LGGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQ 330

Query: 240 GAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRP 299
           GA +      +RRI  S        T+FE  I +S+++SADMAH VHPN+ +KHEE+HRP
Sbjct: 331 GAQSLLTELVLRRISASPQ----HLTAFEEAIPKSYMISADMAHAVHPNYLDKHEENHRP 386

Query: 300 EMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGV 359
              KG VIK N+ QRYA++ V+  L +E+A    +P Q+ +VRND  CG+TIGPILAS +
Sbjct: 387 LFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLMVRNDSPCGTTIGPILASRL 446

Query: 360 GIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 409
           G+R +D G  QL+MHS+RE   T  +      FK F+E F S+ + L+VD
Sbjct: 447 GLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSLSRSLLVD 496
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Length = 428 Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Length = 461 Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Length = 458 Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Length = 450 Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Length = 571 Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Length = 571 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Length = 348 Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Length = 343 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Length = 353 Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Length = 355 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Length = 373 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Length = 340 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query410
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 100.0
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 100.0
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 100.0
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 100.0
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 100.0
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 100.0
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 100.0
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 100.0
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 100.0
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 100.0
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 100.0
2gre_A349 Deblocking aminopeptidase; structural genomi prote 100.0
1ylo_A348 Hypothetical protein SF2450; structural genomics, 100.0
1vho_A346 Endoglucanase; structural genomics, unknown functi 100.0
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 100.0
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 100.0
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 100.0
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.94
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 99.67
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 99.59
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.34
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.3
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 99.02
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.92
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 98.88
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 98.86
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 98.4
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 98.2
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 98.18
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 98.14
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 98.1
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 98.04
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 97.92
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 97.88
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 97.72
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 97.72
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 97.42
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 97.24
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 97.18
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 97.03
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 96.79
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 96.79
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 96.67
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 96.64
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 96.53
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 95.97
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 95.39
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 95.02
3kas_A 640 Transferrin receptor protein 1; transferrin recept 93.9
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 93.81
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 92.96
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 92.54
2pok_A 481 Peptidase, M20/M25/M40 family; M20 family peptidas 92.33
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 91.81
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 91.53
3pfe_A 472 Succinyl-diaminopimelate desuccinylase; metal bind 90.52
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 90.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 89.16
3khx_A 492 Putative dipeptidase sacol1801; DAPE, metallopepti 88.97
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 88.46
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 88.11
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 88.08
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 87.88
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 86.63
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 86.6
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 86.18
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 85.32
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 84.95
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 84.22
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 81.9
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Back     alignment and structure
Probab=100.00  E-value=1.8e-99  Score=783.82  Aligned_cols=402  Identities=51%  Similarity=0.866  Sum_probs=359.3

Q ss_pred             ceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEEC-CCCce
Q 015250            2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRG-SDGSF   80 (410)
Q Consensus         2 gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~-~~g~~   80 (410)
                      ++||||.+|+++.+++|+.|++||+|||||+|||+|.++++||++|+|++|||++|+||+||||+|||||++++ ++|++
T Consensus        92 ssliAf~vg~~~~~~~G~~ivgaHtDSP~lklKp~p~~~~~g~~~l~ve~YGG~l~~tW~DR~L~laGrV~vk~~~~g~~  171 (496)
T 3vat_A           92 STIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRL  171 (496)
T ss_dssp             TEEEEEEECTTCCTTCCEEEEEEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCGGGGTTCCEEEEEEEEEECTTTCCE
T ss_pred             cEEEEEEeCCCCCCCCCeEEEEEeccCCCccccCCccccCCCeeEEccEeCCCchhceecCCchhcceEEEEEecCCCeE
Confidence            47999999988777889999999999999999999999999999999999999999999999999999999995 56789


Q ss_pred             EEEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCcccc--CCccccCCCCCCccCChhHHHHHHHHHc
Q 015250           81 LHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETS--VEPKEKSSTSSSKVTHHPQLMQILSQEL  158 (410)
Q Consensus        81 ~~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~  158 (410)
                      +++||++++|+++||+|||||+++.+ +++++|+++||.|++|....++.  .+.++++ ....+.+|+..|++++++++
T Consensus       172 ~~~Lv~~~~Pi~~IP~LaiHl~r~~n-~~~~~n~q~~l~pi~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~la~~~  249 (496)
T 3vat_A          172 EQRLVHVDRPILRIPHLAIHLQRNVN-ENFGPNMEMHLVPILATSIQEELEKGTPEPGP-LNATDERHHSVLTSLLCAHL  249 (496)
T ss_dssp             EEEEEECCSCCBBCCCCCGGGSTTTT-TCCCCCTTTTTCCEEEEHHHHHHHCC------------CCSCHHHHHHHHHHH
T ss_pred             EEEEEeCCCCeEECCccccccCcchh-cccCcCcccccccEEEeccccccccccccccc-cccccccccHHHHHHHHHHc
Confidence            99999999999999999999999887 57889999999999998522100  0000000 11124578889999999999


Q ss_pred             CCCCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccc
Q 015250          159 GCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY  238 (410)
Q Consensus       159 gV~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga  238 (410)
                      ||++||+++||+++++.||++++|++++||.|+|||||+|||++++||+++++.+..+.+.....++++||||||||||+
T Consensus       250 gv~~~Div~~dl~l~d~~~~~~~Gl~~e~I~s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga  329 (496)
T 3vat_A          250 GLSPEDILEMELCLADTQPAVLGGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESA  329 (496)
T ss_dssp             TCCGGGEEEEEEEEEECSCCEEETTTTCEEEETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSS
T ss_pred             CCCcCceEEEEEEEEecCcceEeccCCceEEeeccccHHHHHHHHHHHHhhhccccccccCCCcEEEEEEccCCcCCCcc
Confidence            99999999999999999999999999999999999999999999999998753100000013356789999999999999


Q ss_pred             cccCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccC
Q 015250          239 QGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATS  318 (410)
Q Consensus       239 ~gA~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~  318 (410)
                      +||++.|+||+|+||..+.    .+++.+++++++|++||+||+||.||||+++++++|.++||+||+||++++++|++|
T Consensus       330 ~gA~s~~~pdvl~ri~~~~----~~~~~~~~~l~~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~  405 (496)
T 3vat_A          330 QGAQSLLTELVLRRISASP----QHLTAFEEAIPKSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASN  405 (496)
T ss_dssp             SSTTSTHHHHHHHHHHCCS----SCTTHHHHHGGGCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCC
T ss_pred             hhccccccHHHHHHHHhcc----CchHHHHHHhhcCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccC
Confidence            9999999999999999763    377899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhh
Q 015250          319 GVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES  398 (410)
Q Consensus       319 ~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~  398 (410)
                      +.+.++++++|+++|||||+++.|+|++||||+|+++.++.||||++||||+|||||++||++++|++++++|+++|+++
T Consensus       406 ~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~ryMHS~~E~~~~~D~~~~v~Ll~af~~~  485 (496)
T 3vat_A          406 AVSEALIREVASSVGVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFEL  485 (496)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEESTTSSSEEEESHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEecCCCCCcchHHHHHhcccCCcEEEecHhhhccccHHHHhhHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccc
Q 015250          399 FSSIDKKLIVD  409 (410)
Q Consensus       399 ~~~~~~~~~~~  409 (410)
                      +.+++.++.+|
T Consensus       486 ~~~~~~~~~~~  496 (496)
T 3vat_A          486 FPSLSRSLLVD  496 (496)
T ss_dssp             HHHHHHTCCCC
T ss_pred             HHHHhhhhcCC
Confidence            99999887765
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 410
d1y7ea2322 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptida 6e-78
d1y7ea2322 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptida 2e-06
d1y7ea1133 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA 3e-39
d1y0ya2255 c.56.5.4 (A:164-351,A:6-72) Frv operon protein Frv 1e-30
d1yloa2264 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {S 7e-15
d2fvga2255 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 { 6e-10
d1vhoa2248 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase 1e-07
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 1e-07
d1vhea2275 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein Y 8e-07
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 322 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Probable aminopeptidase ApeA
species: Borrelia burgdorferi [TaxId: 139]

 Score =  242 bits (618), Expect = 6e-78
 Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 13/230 (5%)

Query: 174 DTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV 233
               +   G +   I +   D+    +  L ++ D   +P+         +  L D EE+
Sbjct: 99  PAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEETPN------KTAICFLVDKEEI 152

Query: 234 GSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKH 293
           GS    G  +  +   +  ++  +     +    +  +  S  +SAD+   ++P FS  H
Sbjct: 153 GSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWNSKSISADVCAAINPLFSSVH 212

Query: 294 EEHHRPEMQKGLVI-KHNANQRYATS----GVTAFLFKEIAKLHNLPTQEFVV-RNDMGC 347
           +E + P++  G+ I K+  +   + +           +++   +N+  Q   + + + G 
Sbjct: 213 DEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATLGKVEEGG 272

Query: 348 GSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 397
           G T+   LA   GIRT+D G A +SMHS  EI    D+  AY  +KAFY 
Sbjct: 273 GGTVAKFLAG-YGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYR 321
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 322 Back     information, alignment and structure
>d1y7ea1 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 133 Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 255 Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Length = 264 Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Length = 255 Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 248 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Length = 275 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query410
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 100.0
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 100.0
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.96
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.96
d1y7ea1133 Probable aminopeptidase ApeA {Borrelia burgdorferi 99.95
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.94
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.93
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.9
d2grea1113 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.8
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.73
d1y0ya191 Frv operon protein FrvX {Pyrococcus horikoshii [Ta 99.66
d1vhea190 Hypothetical protein YsdC {Bacillus subtilis [TaxI 99.65
d1vhoa183 Putative endoglucanase TM1048 {Thermotoga maritima 99.52
d2fvga184 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.51
d1yloa181 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.46
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 97.88
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 97.62
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 97.6
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 97.54
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 97.49
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 96.29
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 96.28
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 95.14
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 95.09
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 93.67
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 91.96
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 89.38
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 86.11
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 82.03
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Probable aminopeptidase ApeA
species: Borrelia burgdorferi [TaxId: 139]

Probab=100.00  E-value=1.4e-59  Score=461.08  Aligned_cols=216  Identities=25%  Similarity=0.346  Sum_probs=172.4

Q ss_pred             CCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccccCCcchHHHHHHHHH
Q 015250          176 QPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVG  255 (410)
Q Consensus       176 ~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA~~~~~p~~l~ri~~  255 (410)
                      ++++++|++++||.|+|||||+|||++++||++..+.      ++.+.++++||||||||+|++||++.|++++|.||..
T Consensus       101 ~~~~~~G~d~efi~s~rlDd~~~~~~~l~Ali~~~~~------~~~~~v~~~~D~EEIGS~s~~GA~s~~l~~~l~ri~~  174 (322)
T d1y7ea2         101 GTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEET------PNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIF  174 (322)
T ss_dssp             SCCEEETTTTCEEEESSHHHHHHHHHHHHHHSSSSCC------CSSCEECCCBCSTTC--------CTTHHHHHHHHHHH
T ss_pred             ccccccccccceeeccCCccHHHHHHHHHHHHhhhcC------CCceEEEEEecccccCCCccccccCccHHHHHHHHHH
Confidence            3455678899999999999999999999999876532      3456788999999999999999999999999999999


Q ss_pred             hcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEE-EEcCCCcc----ccCHHHHHHHHHHHH
Q 015250          256 SLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVI-KHNANQRY----ATSGVTAFLFKEIAK  330 (410)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi-~~~~~~~~----~t~~~~~~~l~~~A~  330 (410)
                      +++.+.++++.+.+++++|++||+||+||.||||+++|+++|.++||+||+| |++.++++    .+++.+.+.++++|+
T Consensus       175 ~l~~~~~~~~~~~~al~~S~~iSaDvahA~hPny~~~~d~~~~~~lg~G~~i~k~~~~~~~~~~~~a~~~~~~~~~~ia~  254 (322)
T d1y7ea2         175 KIKKSEYNNLHVQKALWNSKSISADVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLN  254 (322)
T ss_dssp             HHSSTTCCTHHHHHHHHHCEEEECCCEECCCC-------CTTSCCTTSCEEEEEEC-----------CHHHHHHHHHHHH
T ss_pred             HhcCCCccchhHHHHHhhceeeeccccccccCCCccccccccccccCCCceEEEecCCCccccccccchHHHHHHHHHHH
Confidence            9988778888999999999999999999999999999999999999999988 55555444    348899999999999


Q ss_pred             HCCCCEeEEEe-ecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhh
Q 015250          331 LHNLPTQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES  398 (410)
Q Consensus       331 ~~~Ip~Q~~~~-~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~  398 (410)
                      ++|||||.++. |+|++||||+|++.+ +.||||+|||+|+|||||+||||+++|++++++|+++||+.
T Consensus       255 ~~~Ip~Q~~~v~r~d~~gGsTig~i~a-~~Gi~tvdiGiP~l~MHS~rE~~~~~D~~~~~~l~~aF~ee  322 (322)
T d1y7ea2         255 KNNIAWQVATLGKVEEGGGGTVAKFLA-GYGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYRE  322 (322)
T ss_dssp             HHTCCEEEEEECC-----CHHHHHHHH-HHTCEEEEECCEEBSTTSSSEEEEHHHHHHHHHHHHHTTTC
T ss_pred             hcCCCeeEEEeccCCCCCcchHHHHHh-cCCCCEEEcCHHHhhhhHHHHHhchhhHHHHHHHHHHHhcC
Confidence            99999999864 999999999999864 58999999999999999999999999999999999999873
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1y7ea1 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2grea1 b.49.3.1 (A:74-186) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1y0ya1 b.49.3.1 (A:73-163) Frv operon protein FrvX {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1vhea1 b.49.3.1 (A:73-162) Hypothetical protein YsdC {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vhoa1 b.49.3.1 (A:70-152) Putative endoglucanase TM1048 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fvga1 b.49.3.1 (A:65-148) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yloa1 b.49.3.1 (A:67-147) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure