Citrus Sinensis ID: 015278

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRNKC
cccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHcccccccccccccEEEEEccccccccccccccccccccccEEEEccccccccEEEEEccccccccEEEEcccccccccEEEEccEEcccccEEcccccccccccccccHHHHHHcccccccccEEcccccEEEEEEcccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEccccccccccc
ccccccccccccccHHHcccHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHccccccccccccccccHHEEEEEEEEHHcccccEEEEEEcccccccccEEEcHHHHcccEEEEEEEcccccEEEEEEEccccccEEEEEEEcccccccEEEEcEEEEcccEEEccccccHHHHHccccHHHHHHHccccccEEEEcccccEEEEEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccc
mpaqrsksertdagkqlrrdpyevlgvsrnctdQEIKSAYRKMALkyhpdknandpvaADIFKEVTfsynilsdpdkrrqydtagfeaVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMvtvrpllldqHITRKVEKQCAHFYSVTITEEEARAGFvcrvqssdkskfkllyfdregtgglsLALQEDctktgkvtsagmyflgfpvyrldqtatsmaaakdpdaaffkkldgfqpceitelkaGTHVFAVYGDNFFKSASYMIEALcaapfteeKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHasyttappmkrstsknrsrgspketkeegqvrdkkptmrdrpkkkkwFNIHLkadkrnkc
mpaqrsksertdagkqlrrdpyevlgvsrnctdqEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFsynilsdpdkrRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFvcrvqssdkskFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAVEAEILSKraelskfesEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHAsyttappmkrstsknrsrgspketkeegqvrdkkptmrdrpkkkkwfnihlkadkrnkc
MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVesesqeleldlsslGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMaaakdpdaaffkkLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRNKC
***********************VLGVSRNCTDQEIKSAYRKMALKYHP***ANDPVAADIFKEVTFSYNILS************************LDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAVEAEILS*******F**EYREVLAQFTEM**********************************************************************************
********************PYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESES*****DLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMV******************CAHFYSVTITEEEARAGFVCRVQSSDKSKF********************************YFLGFPVYRL***********DPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTE************LSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYT********************************************NIHLKA******
***************QLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA**********DLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTA*************************************KKKWFNIHLKADKRNKC
***************QLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESE*QELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTA*************************************KKKWFNIHLKAD*****
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MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENxxxxxxxxxxxxxxxxxxxxxYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRNKC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query410 2.2.26 [Sep-21-2011]
Q8VXV4436 Chaperone protein dnaJ 16 yes no 1.0 0.940 0.727 0.0
Q6XL73414 Chaperone protein dnaJ 39 no no 0.985 0.975 0.631 1e-146
Q9ZSY2410 Chaperone protein dnaJ 15 no no 0.951 0.951 0.611 1e-144
Q3AF07381 Chaperone protein DnaJ OS yes no 0.241 0.259 0.427 1e-18
A5WBF8377 Chaperone protein DnaJ OS yes no 0.246 0.267 0.435 2e-17
Q3SIN3372 Chaperone protein DnaJ OS yes no 0.185 0.204 0.552 2e-17
Q8EUM4388 Chaperone protein DnaJ OS yes no 0.180 0.190 0.56 4e-17
Q9XCA6383 Chaperone protein DnaJ OS yes no 0.158 0.169 0.630 6e-17
Q5FGQ8382 Chaperone protein DnaJ OS yes no 0.239 0.256 0.46 6e-17
Q67S53386 Chaperone protein DnaJ OS yes no 0.173 0.183 0.563 7e-17
>sp|Q8VXV4|DNJ16_ARATH Chaperone protein dnaJ 16 OS=Arabidopsis thaliana GN=ATJ16 PE=2 SV=1 Back     alignment and function desciption
 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/436 (72%), Positives = 363/436 (83%), Gaps = 26/436 (5%)

Query: 1   MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAAD 60
           MP  RSKSE+ DA KQLRRDPYEVLGV RN TDQEIKSAYRK+ALKYHPDK ANDPVAAD
Sbjct: 1   MPGHRSKSEKKDADKQLRRDPYEVLGVLRNSTDQEIKSAYRKLALKYHPDKTANDPVAAD 60

Query: 61  IFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVP 120
           +FKEVTFSYNILSDP+KRRQ+D+AGFEAVE+ESQELELDLSSLGAVNT+FAALFSKLGVP
Sbjct: 61  MFKEVTFSYNILSDPEKRRQFDSAGFEAVEAESQELELDLSSLGAVNTVFAALFSKLGVP 120

Query: 121 IKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQS 180
           IKT+VSAT+LEEALNG V+V PL+L Q +++KVEKQCAHFY+VTI+EEE  AG VCRV+S
Sbjct: 121 IKTSVSATILEEALNGRVSVDPLVLGQAVSKKVEKQCAHFYAVTISEEEVSAGLVCRVES 180

Query: 181 SDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKD 240
           S KSKFKLLYFD+E   GLSLALQED  +TGK+TSAGMYFLGFPVYRLD T  SMA AKD
Sbjct: 181 SSKSKFKLLYFDQEANSGLSLALQEDSKRTGKITSAGMYFLGFPVYRLDHTINSMAQAKD 240

Query: 241 PDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAV 300
           P+ AFFKKLDGFQ CE+TELKAGTHVFAVYGDNFFK+ SY I+ LCAA FT+EKE+LR+V
Sbjct: 241 PETAFFKKLDGFQQCEVTELKAGTHVFAVYGDNFFKNVSYTIQVLCAAAFTQEKEDLRSV 300

Query: 301 EAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMK 360
           EA+IL+KRAEL+KFE+EYREVL QFT+MTSRYAQEMQ+IDELLKQRNEIH++YTT P MK
Sbjct: 301 EAQILTKRAELAKFETEYREVLVQFTDMTSRYAQEMQSIDELLKQRNEIHSAYTTIPLMK 360

Query: 361 RSTSKNRSRGSP----------------------KETKEEGQVRDKKPTMRDRP----KK 394
           RS+SKNR R S                       +E +E  + ++KKP+  D+     KK
Sbjct: 361 RSSSKNRMRKSSFKKAAAKAPAPTEQEEEEEEEEEEEEESSRQKNKKPSTCDKSETLKKK 420

Query: 395 KKWFNIHLKADKRNKC 410
            KWFN+HLK DK+  C
Sbjct: 421 SKWFNLHLKLDKKKPC 436
Have a continuous role in plant development probably in the structural organization of compartments (By similarity). Seems to not be involved in gravitropism signaling pathway.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6XL73|DNJ39_ARATH Chaperone protein dnaJ 39 OS=Arabidopsis thaliana GN=ATJ39 PE=2 SV=2 Back     alignment and function description
>sp|Q9ZSY2|DNJ15_ARATH Chaperone protein dnaJ 15 OS=Arabidopsis thaliana GN=ATJ15 PE=1 SV=1 Back     alignment and function description
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|A5WBF8|DNAJ_PSYWF Chaperone protein DnaJ OS=Psychrobacter sp. (strain PRwf-1) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q3SIN3|DNAJ_THIDA Chaperone protein DnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q8EUM4|DNAJ_MYCPE Chaperone protein DnaJ OS=Mycoplasma penetrans (strain HF-2) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q9XCA6|DNAJ_PORGI Chaperone protein DnaJ OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q5FGQ8|DNAJ_EHRRG Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Gardel) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q67S53|DNAJ_SYMTH Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T / IAM 14863) GN=dnaJ PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query410
296086494408 unnamed protein product [Vitis vinifera] 0.995 1.0 0.841 0.0
147794990408 hypothetical protein VITISV_024054 [Viti 0.995 1.0 0.841 0.0
255558376410 altered response to gravity (arg1), plan 1.0 1.0 0.863 0.0
356498024410 PREDICTED: chaperone protein dnaJ 16-lik 0.995 0.995 0.803 0.0
359473327413 PREDICTED: chaperone protein dnaJ 16 [Vi 0.953 0.946 0.83 0.0
356501218413 PREDICTED: chaperone protein dnaJ 16-lik 0.995 0.987 0.812 0.0
449452046407 PREDICTED: chaperone protein dnaJ 16-lik 0.992 1.0 0.809 0.0
357486161414 Chaperone protein dnaJ [Medicago truncat 0.997 0.987 0.8 0.0
224100225408 predicted protein [Populus trichocarpa] 0.995 1.0 0.843 0.0
297850890436 hypothetical protein ARALYDRAFT_472672 [ 1.0 0.940 0.731 0.0
>gi|296086494|emb|CBI32083.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/410 (84%), Positives = 376/410 (91%), Gaps = 2/410 (0%)

Query: 1   MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAAD 60
           MP  RS+SE+TDAGKQLRRDPYEVLGV RN TDQEIKSAYRKMALKYHPDKNANDP AAD
Sbjct: 1   MPGHRSQSEKTDAGKQLRRDPYEVLGVLRNSTDQEIKSAYRKMALKYHPDKNANDPKAAD 60

Query: 61  IFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVP 120
           +FKEVTFSYNILSDPDKRRQYDTAGFEAVESE QELELDLS+LGAVNTMFAALFSKLGVP
Sbjct: 61  MFKEVTFSYNILSDPDKRRQYDTAGFEAVESEGQELELDLSNLGAVNTMFAALFSKLGVP 120

Query: 121 IKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQS 180
           IKTTVSATVLE+ALNG+VTVRPL L Q + +KVEKQCAHFYSVT+TEEEA+ GFVCRVQS
Sbjct: 121 IKTTVSATVLEDALNGVVTVRPLTLGQPVVKKVEKQCAHFYSVTLTEEEAQTGFVCRVQS 180

Query: 181 SDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKD 240
           SDKSKFKLLYFD+E  GGL+L+LQED  +TGKVTSAGMYFLGFPVYRLDQT  SMAAAKD
Sbjct: 181 SDKSKFKLLYFDQEEGGGLNLSLQEDSARTGKVTSAGMYFLGFPVYRLDQTVNSMAAAKD 240

Query: 241 PDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAV 300
           PD+AFFK+LDGFQPCE+TELKAGTHVFAVYGDNFFKS SY IEALC APF EEKENLRAV
Sbjct: 241 PDSAFFKRLDGFQPCEMTELKAGTHVFAVYGDNFFKSVSYTIEALCTAPFAEEKENLRAV 300

Query: 301 EAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMK 360
           EA+IL+KR ELSKFE+EYREVL QFTEMTSRYAQEMQAID+LLKQRNEIHASY++APP+K
Sbjct: 301 EAQILTKRVELSKFETEYREVLTQFTEMTSRYAQEMQAIDDLLKQRNEIHASYSSAPPIK 360

Query: 361 RSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRNKC 410
           RS SKN  RG  K++K++GQV+DKKP  R+RPKKKKW+NIHLK DK   C
Sbjct: 361 RSRSKN--RGLSKDSKDDGQVKDKKPAFRERPKKKKWYNIHLKVDKSKPC 408

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147794990|emb|CAN74067.1| hypothetical protein VITISV_024054 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255558376|ref|XP_002520215.1| altered response to gravity (arg1), plant, putative [Ricinus communis] gi|223540707|gb|EEF42270.1| altered response to gravity (arg1), plant, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356498024|ref|XP_003517855.1| PREDICTED: chaperone protein dnaJ 16-like [Glycine max] Back     alignment and taxonomy information
>gi|359473327|ref|XP_002269863.2| PREDICTED: chaperone protein dnaJ 16 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356501218|ref|XP_003519423.1| PREDICTED: chaperone protein dnaJ 16-like [Glycine max] Back     alignment and taxonomy information
>gi|449452046|ref|XP_004143771.1| PREDICTED: chaperone protein dnaJ 16-like [Cucumis sativus] gi|449486531|ref|XP_004157324.1| PREDICTED: chaperone protein dnaJ 16-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357486161|ref|XP_003613368.1| Chaperone protein dnaJ [Medicago truncatula] gi|355514703|gb|AES96326.1| Chaperone protein dnaJ [Medicago truncatula] Back     alignment and taxonomy information
>gi|224100225|ref|XP_002311794.1| predicted protein [Populus trichocarpa] gi|222851614|gb|EEE89161.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297850890|ref|XP_002893326.1| hypothetical protein ARALYDRAFT_472672 [Arabidopsis lyrata subsp. lyrata] gi|297339168|gb|EFH69585.1| hypothetical protein ARALYDRAFT_472672 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query410
TAIR|locus:2032437436 ARL1 "ARG1-like 1" [Arabidopsi 0.965 0.908 0.697 4.5e-146
TAIR|locus:2202725414 ARL2 "ARG1-like 2" [Arabidopsi 0.985 0.975 0.595 2.7e-123
TAIR|locus:2202334410 ARG1 "ALTERED RESPONSE TO GRAV 0.951 0.951 0.573 3.8e-117
WB|WBGene00001034395 dnj-16 [Caenorhabditis elegans 0.858 0.891 0.351 1.8e-46
TIGR_CMR|CHY_0416381 CHY_0416 "chaperone protein dn 0.241 0.259 0.470 2.2e-18
TIGR_CMR|DET_1398356 DET_1398 "co-chaperone protein 0.234 0.269 0.422 1.6e-16
TIGR_CMR|GSU_0034373 GSU_0034 "chaperone protein dn 0.175 0.193 0.569 3.9e-16
UNIPROTKB|J9P8A9269 DNAJB11 "DnaJ homolog subfamil 0.204 0.312 0.452 7.3e-16
WB|WBGene00001032217 dnj-14 [Caenorhabditis elegans 0.156 0.294 0.553 9.5e-16
ZFIN|ZDB-GENE-081021-2199 dnajc5ab "DnaJ (Hsp40) homolog 0.187 0.386 0.512 2e-15
TAIR|locus:2032437 ARL1 "ARG1-like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1427 (507.4 bits), Expect = 4.5e-146, P = 4.5e-146
 Identities = 284/407 (69%), Positives = 324/407 (79%)

Query:     1 MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAAD 60
             MP  RSKSE+ DA KQLRRDPYEVLGV RN TDQEIKSAYRK+ALKYHPDK ANDPVAAD
Sbjct:     1 MPGHRSKSEKKDADKQLRRDPYEVLGVLRNSTDQEIKSAYRKLALKYHPDKTANDPVAAD 60

Query:    61 IFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLGVP 120
             +FKEVTFSYNILSDP+KRRQ+D+AGFEAV              GAVNT+FAALFSKLGVP
Sbjct:    61 MFKEVTFSYNILSDPEKRRQFDSAGFEAVEAESQELELDLSSLGAVNTVFAALFSKLGVP 120

Query:   121 IKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQS 180
             IKT+VSAT+LEEALNG V+V PL+L Q +++KVEKQCAHFY+VTI+EEE  AG VCRV+S
Sbjct:   121 IKTSVSATILEEALNGRVSVDPLVLGQAVSKKVEKQCAHFYAVTISEEEVSAGLVCRVES 180

Query:   181 SDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMXXXXX 240
             S KSKFKLLYFD+E   GLSLALQED  +TGK+TSAGMYFLGFPVYRLD T  SM     
Sbjct:   181 SSKSKFKLLYFDQEANSGLSLALQEDSKRTGKITSAGMYFLGFPVYRLDHTINSMAQAKD 240

Query:   241 XXXXXXXXLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAV 300
                     LDGFQ CE+TELKAGTHVFAVYGDNFFK+ SY I+ LCAA FT+EKE+LR+V
Sbjct:   241 PETAFFKKLDGFQQCEVTELKAGTHVFAVYGDNFFKNVSYTIQVLCAAAFTQEKEDLRSV 300

Query:   301 EAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMK 360
             EA+IL+KRAEL+KFE+EYREVL QFT+MTSRYAQEMQ+IDELLKQRNEIH++YTT P MK
Sbjct:   301 EAQILTKRAELAKFETEYREVLVQFTDMTSRYAQEMQSIDELLKQRNEIHSAYTTIPLMK 360

Query:   361 RSTSKNRSRGS-----------PKETKEEGQVRDKKPTMRDRPKKKK 396
             RS+SKNR R S           P E +EE +  +++     R K KK
Sbjct:   361 RSSSKNRMRKSSFKKAAAKAPAPTEQEEEEEEEEEEEEESSRQKNKK 407
GO:0005634 "nucleus" evidence=ISM
GO:0006457 "protein folding" evidence=IEA;ISS
GO:0031072 "heat shock protein binding" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
TAIR|locus:2202725 ARL2 "ARG1-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202334 ARG1 "ALTERED RESPONSE TO GRAVITY 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00001034 dnj-16 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0416 CHY_0416 "chaperone protein dnaJ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1398 DET_1398 "co-chaperone protein DnaJ" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0034 GSU_0034 "chaperone protein dnaJ" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|J9P8A9 DNAJB11 "DnaJ homolog subfamily B member 11" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00001032 dnj-14 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081021-2 dnajc5ab "DnaJ (Hsp40) homolog, subfamily C, member 5ab" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VXV4DNJ16_ARATHNo assigned EC number0.72701.00.9403yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
PRK10767371 PRK10767, PRK10767, chaperone protein DnaJ; Provis 3e-29
pfam0022663 pfam00226, DnaJ, DnaJ domain 5e-29
COG0484371 COG0484, DnaJ, DnaJ-class molecular chaperone with 3e-28
TIGR02349354 TIGR02349, DnaJ_bact, chaperone protein DnaJ 3e-26
PRK14301373 PRK14301, PRK14301, chaperone protein DnaJ; Provis 5e-23
PRK14281397 PRK14281, PRK14281, chaperone protein DnaJ; Provis 7e-23
smart0027160 smart00271, DnaJ, DnaJ molecular chaperone homolog 5e-22
cd0625755 cd06257, DnaJ, DnaJ domain or J-domain 7e-22
PRK14294366 PRK14294, PRK14294, chaperone protein DnaJ; Provis 8e-22
PRK14291382 PRK14291, PRK14291, chaperone protein DnaJ; Provis 8e-22
PRK14278378 PRK14278, PRK14278, chaperone protein DnaJ; Provis 1e-21
PRK14289386 PRK14289, PRK14289, chaperone protein DnaJ; Provis 1e-21
PRK14297380 PRK14297, PRK14297, chaperone protein DnaJ; Provis 2e-21
PRK14277386 PRK14277, PRK14277, chaperone protein DnaJ; Provis 2e-21
PRK14298377 PRK14298, PRK14298, chaperone protein DnaJ; Provis 1e-20
PRK14295389 PRK14295, PRK14295, chaperone protein DnaJ; Provis 5e-20
PRK14285365 PRK14285, PRK14285, chaperone protein DnaJ; Provis 7e-20
PRK14276380 PRK14276, PRK14276, chaperone protein DnaJ; Provis 8e-20
PRK14284391 PRK14284, PRK14284, chaperone protein DnaJ; Provis 9e-20
PRK14293374 PRK14293, PRK14293, chaperone protein DnaJ; Provis 2e-19
PRK14280376 PRK14280, PRK14280, chaperone protein DnaJ; Provis 2e-19
PRK14283378 PRK14283, PRK14283, chaperone protein DnaJ; Provis 4e-19
PTZ00037421 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov 5e-19
PRK14286372 PRK14286, PRK14286, chaperone protein DnaJ; Provis 1e-18
PRK14299291 PRK14299, PRK14299, chaperone protein DnaJ; Provis 1e-18
TIGR03835 871 TIGR03835, termin_org_DnaJ, terminal organelle ass 2e-18
PRK14296372 PRK14296, PRK14296, chaperone protein DnaJ; Provis 4e-18
PRK14279392 PRK14279, PRK14279, chaperone protein DnaJ; Provis 4e-18
PRK14292371 PRK14292, PRK14292, chaperone protein DnaJ; Provis 4e-18
PRK14290365 PRK14290, PRK14290, chaperone protein DnaJ; Provis 6e-17
PRK14282369 PRK14282, PRK14282, chaperone protein DnaJ; Provis 4e-16
PRK14287371 PRK14287, PRK14287, chaperone protein DnaJ; Provis 5e-16
COG2214237 COG2214, CbpA, DnaJ-class molecular chaperone [Pos 1e-14
PRK14288369 PRK14288, PRK14288, chaperone protein DnaJ; Provis 7e-12
PRK14300372 PRK14300, PRK14300, chaperone protein DnaJ; Provis 4e-11
COG5407 610 COG5407, SEC63, Preprotein translocase subunit Sec 5e-10
PRK10266306 PRK10266, PRK10266, curved DNA-binding protein Cbp 6e-10
PRK09430267 PRK09430, djlA, Dna-J like membrane chaperone prot 2e-07
COG5269379 COG5269, ZUO1, Ribosome-associated chaperone zuoti 5e-06
PTZ00341 1136 PTZ00341, PTZ00341, Ring-infected erythrocyte surf 9e-06
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional Back     alignment and domain information 
 Score =  116 bits (293), Expect = 3e-29
 Identities = 42/72 (58%), Positives = 51/72 (70%)

Query: 19 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKR 78
          RD YEVLGVSRN ++ EIK AYRK+A+KYHPD+N  D  A + FKE+  +Y +LSDP KR
Sbjct: 4  RDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKR 63

Query: 79 RQYDTAGFEAVE 90
            YD  G  A E
Sbjct: 64 AAYDQYGHAAFE 75

Length = 371
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain Back     alignment and domain information
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ Back     alignment and domain information
>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain Back     alignment and domain information
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain Back     alignment and domain information
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ Back     alignment and domain information
>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 410
KOG0713336 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 100.0
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
PRK14296372 chaperone protein DnaJ; Provisional 100.0
PRK14288369 chaperone protein DnaJ; Provisional 100.0
PTZ00037421 DnaJ_C chaperone protein; Provisional 100.0
PRK14298377 chaperone protein DnaJ; Provisional 100.0
PRK14276380 chaperone protein DnaJ; Provisional 100.0
PRK14287371 chaperone protein DnaJ; Provisional 100.0
PRK14278378 chaperone protein DnaJ; Provisional 100.0
PRK14285365 chaperone protein DnaJ; Provisional 100.0
PRK14286372 chaperone protein DnaJ; Provisional 100.0
PRK14282369 chaperone protein DnaJ; Provisional 100.0
PRK14280376 chaperone protein DnaJ; Provisional 100.0
PRK14277386 chaperone protein DnaJ; Provisional 100.0
PRK14297380 chaperone protein DnaJ; Provisional 100.0
PRK14294366 chaperone protein DnaJ; Provisional 100.0
PRK14279392 chaperone protein DnaJ; Provisional 100.0
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 100.0
PRK14284391 chaperone protein DnaJ; Provisional 100.0
PRK14281397 chaperone protein DnaJ; Provisional 100.0
PRK10767371 chaperone protein DnaJ; Provisional 100.0
PRK14290365 chaperone protein DnaJ; Provisional 100.0
PRK14301373 chaperone protein DnaJ; Provisional 100.0
PRK14295389 chaperone protein DnaJ; Provisional 100.0
PRK14291382 chaperone protein DnaJ; Provisional 100.0
PRK14283378 chaperone protein DnaJ; Provisional 100.0
PRK14300372 chaperone protein DnaJ; Provisional 100.0
PRK14293374 chaperone protein DnaJ; Provisional 100.0
PRK14289386 chaperone protein DnaJ; Provisional 100.0
PRK14292371 chaperone protein DnaJ; Provisional 100.0
PRK14299291 chaperone protein DnaJ; Provisional 99.96
PRK10266306 curved DNA-binding protein CbpA; Provisional 99.95
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 99.9
KOG0716279 consensus Molecular chaperone (DnaJ superfamily) [ 99.77
KOG0717 508 consensus Molecular chaperone (DnaJ superfamily) [ 99.77
KOG0691296 consensus Molecular chaperone (DnaJ superfamily) [ 99.74
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 99.74
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 99.7
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 99.7
KOG0719264 consensus Molecular chaperone (DnaJ superfamily) [ 99.69
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 99.61
PHA03102153 Small T antigen; Reviewed 99.61
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 99.6
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 99.57
COG2214237 CbpA DnaJ-class molecular chaperone [Posttranslati 99.57
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 99.56
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 99.52
KOG0714306 consensus Molecular chaperone (DnaJ superfamily) [ 99.5
PRK05014171 hscB co-chaperone HscB; Provisional 99.4
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 99.4
PRK01356166 hscB co-chaperone HscB; Provisional 99.37
KOG0722329 consensus Molecular chaperone (DnaJ superfamily) [ 99.35
PRK03578176 hscB co-chaperone HscB; Provisional 99.35
PRK00294173 hscB co-chaperone HscB; Provisional 99.33
KOG0720490 consensus Molecular chaperone (DnaJ superfamily) [ 99.31
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 99.13
PTZ00100116 DnaJ chaperone protein; Provisional 99.12
PHA02624 647 large T antigen; Provisional 99.04
COG5407 610 SEC63 Preprotein translocase subunit Sec63 [Intrac 98.9
PRK01773173 hscB co-chaperone HscB; Provisional 98.86
KOG1150250 consensus Predicted molecular chaperone (DnaJ supe 98.85
COG5269379 ZUO1 Ribosome-associated chaperone zuotin [Transla 98.84
TIGR00714157 hscB Fe-S protein assembly co-chaperone HscB. This 98.79
KOG1789 2235 consensus Endocytosis protein RME-8, contains DnaJ 98.03
TIGR03835871 termin_org_DnaJ terminal organelle assembly protei 98.01
KOG0568342 consensus Molecular chaperone (DnaJ superfamily) [ 97.78
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 97.22
KOG3192168 consensus Mitochondrial J-type chaperone [Posttran 95.92
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 95.59
KOG0431453 consensus Auxilin-like protein and related protein 94.77
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 93.4
PF0068466 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0 91.16
PF03656127 Pam16: Pam16; InterPro: IPR005341 The Pam16 protei 84.11
KOG0713336 consensus Molecular chaperone (DnaJ superfamily) [ 83.73
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=5.8e-53  Score=412.47  Aligned_cols=315  Identities=35%  Similarity=0.447  Sum_probs=275.7

Q ss_pred             CCCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccccccccch
Q 015278           15 KQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQ   94 (410)
Q Consensus        15 ~~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~~~~   94 (410)
                      ....+|||+||||+++||+.|||+|||||||+|||||||+||.|.+.|++|+.||+|||||++|+.||.+|++++...+.
T Consensus        12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~   91 (336)
T KOG0713|consen   12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENK   91 (336)
T ss_pred             hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccc
Confidence            34579999999999999999999999999999999999999999999999999999999999999999999999876542


Q ss_pred             hhhhccccchhHHHHHHHHhccCCcceeeeechhHHHHHhCCceeeeecccccccccccccccccccceeEeeeeccCCc
Q 015278           95 ELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGF  174 (410)
Q Consensus        95 ~~~~d~s~~g~~~~iF~~fFg~~G~~i~ttVs~t~LEea~nG~~~~~~L~~g~~vC~kcegq~a~~ygv~i~~eqi~~G~  174 (410)
                      ....+.++    +++|..||+.+|+    ++....++++         ++.|..+...++++|+|+|.+.++.+....|+
T Consensus        92 ~~~~g~~~----~~~f~~~f~dfg~----~~~g~~~~e~---------~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v  154 (336)
T KOG0713|consen   92 DGEGGGGG----NDIFSAFFGDFGV----TVGGNPLEEA---------LPKGSDVSSDLEKQLEHFYMGNFVEEVREKGV  154 (336)
T ss_pred             ccccCCcc----cchHHHhhccccc----ccCCCcccCC---------CCCCceEEeehhhchhhhhcccHHHHHhccCc
Confidence            22222111    6899999999987    3333333333         55667777788899999999999999999999


Q ss_pred             EEEEeccCCCcceeeeeeccCCCcceeeeccccccCCceeeeceEEEeeeeeecCcccccccccCCCCccccCCCCCCCc
Q 015278          175 VCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQP  254 (410)
Q Consensus       175 v~qvqS~c~sKck~~~f~~~g~Gg~~~~~~eD~~k~gkvt~~~~~~L~~pv~~~~~g~~~~~~~kd~~~~~F~~l~g~~~  254 (410)
                      +.++..+...+|++++|++.+.+|.....|+..|.+++..            +++-       ..+..+.+|+++.++++
T Consensus       155 ~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~~------------k~~~-------e~~~~~~~~~~~~~~~~  215 (336)
T KOG0713|consen  155 YKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPNV------------KLVL-------EEDPLEVEFERGDADGP  215 (336)
T ss_pred             eeecCcccccCChhhheeeccCCChhhhhhhhhhccCCcc------------ceee-------cCCceeeeeeecccCCc
Confidence            9999999999999999999988888888888888766551            1121       45667889999999999


Q ss_pred             cceEEEeccceeEEEeCCceeEeeeeeEEEeecCCchhhhhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 015278          255 CEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQ  334 (410)
Q Consensus       255 ~d~~~l~~~~H~F~r~Gdnl~~~~~is~eaL~g~~~~~~~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~  334 (410)
                      ..+.+++.++|+||+||||||..+.|+.+.++..+.....+.++++|++|+.++.||..|+.||++|++++.++..++..
T Consensus       216 ~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~  295 (336)
T KOG0713|consen  216 EEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTR  295 (336)
T ss_pred             eeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 015278          335 EMQAIDELLKQRNEIHASYTTAPPMKRSTSK  365 (410)
Q Consensus       335 ~~~~~~~ll~~r~~~~~~~~~~~~~~~~~~~  365 (410)
                      +.+++.++|+.|+.++..|++.++..-.++.
T Consensus       296 ~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~  326 (336)
T KOG0713|consen  296 KKGEGMPLLKNRNEKGNLYVTFDVEFPKSSL  326 (336)
T ss_pred             hhhccchhhhccchhcceeEEecccCccccc
Confidence            9999999999999999999999887754333

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation Back     alignment and domain information
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) [] Back     alignment and domain information
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
2ctp_A78 Solution Structure Of J-Domain From Human Dnaj Subf 1e-15
2ctw_A109 Solution Structure Of J-Domain From Mouse Dnaj Subf 1e-14
1hdj_A77 Human Hsp40 (Hdj-1), Nmr Length = 77 2e-14
1bqz_A77 J-Domain (Residues 1-77) Of The Escherichia Coli N- 1e-13
2lo1_A71 Nmr Structure Of The Protein Bc008182, A Dnaj-Like 2e-13
2och_A73 J-domain Of Dnj-12 From Caenorhabditis Elegans Leng 2e-13
2dn9_A79 Solution Structure Of J-Domain From The Dnaj Homolo 2e-13
1xbl_A107 Nmr Structure Of The J-Domain (Residues 2-76) In Th 3e-13
1bq0_A103 J-Domain (Residues 1-77) Of The Escherichia Coli N- 4e-13
2o37_A92 J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S 1e-12
2ctr_A88 Solution Structure Of J-Domain From Human Dnaj Subf 5e-12
2cug_A88 Solution Structure Of The J Domain Of The Pseudo Dn 6e-12
3apo_A 780 Crystal Structure Of Full-Length Erdj5 Length = 780 2e-11
3apq_A210 Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt 3e-11
2dmx_A92 Solution Structure Of The J Domain Of Dnaj Homolog 4e-11
2ej7_A82 Solution Structure Of The Dnaj Domain Of The Human 1e-10
2lgw_A99 Solution Structure Of The J Domain Of Hsj1a Length 3e-10
2y4u_A450 Crystal Structure Of Human P58(Ipk) In Space Group 3e-09
2y4t_A450 Crystal Structure Of The Human Co-Chaperone P58(Ipk 4e-09
2kqx_A73 Nmr Structure Of The J-Domain (Residues 2-72) In Th 4e-07
2yua_A99 Solution Structure Of The Dnaj Domain From Human Wi 9e-07
3lz8_A329 Structure Of A Putative Chaperone Dnaj From Klebsie 7e-06
2l6l_A155 Solution Structure Of Human J-Protein Co-Chaperone, 2e-05
1wjz_A94 Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P 1e-04
2ys8_A90 Solution Structure Of The Dnaj-Like Domain From Hum 4e-04
>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78 Back     alignment and structure 
Iteration: 1

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 20 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRR 79
          D YE+LGVSR  +D+++K AYR++ALK+HPDKN + P A + FK +  +Y +LS+P+KR+
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPEKRK 66
Query: 80 QYDTAG 85
          QYD  G
Sbjct: 67 QYDQFG 72
>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109 Back     alignment and structure
>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77 Back     alignment and structure
>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77 Back     alignment and structure
>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71 Back     alignment and structure
>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73 Back     alignment and structure
>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79 Back     alignment and structure
>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107 Back     alignment and structure
>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103 Back     alignment and structure
>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92 Back     alignment and structure
>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88 Back     alignment and structure
>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88 Back     alignment and structure
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780 Back     alignment and structure
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210 Back     alignment and structure
>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92 Back     alignment and structure
>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82 Back     alignment and structure
>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99 Back     alignment and structure
>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450 Back     alignment and structure
>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450 Back     alignment and structure
>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73 Back     alignment and structure
>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99 Back     alignment and structure
>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329 Back     alignment and structure
>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155 Back     alignment and structure
>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94 Back     alignment and structure
>pdb|2YS8|A Chain A, Solution Structure Of The Dnaj-Like Domain From Human Ras- Associated Protein Rap1 Length = 90 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 6e-32
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 7e-32
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 1e-31
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 1e-31
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 5e-31
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 3e-30
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 4e-30
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 6e-30
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 7e-30
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 2e-29
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 3e-29
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 4e-29
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 7e-29
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 9e-29
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 2e-28
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 5e-28
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 7e-28
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 2e-27
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 9e-25
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 7e-24
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 8e-24
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 6e-23
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 2e-22
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 2e-21
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 2e-16
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 2e-13
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 2e-12
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 2e-12
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 4e-12
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 3e-11
2guz_A71 Mitochondrial import inner membrane translocase su 5e-10
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 3e-09
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 5e-09
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 1e-07
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103 Back     alignment and structure
 Score =  115 bits (291), Expect = 6e-32
 Identities = 33/72 (45%), Positives = 48/72 (66%)

Query: 19 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKR 78
          +D YE+LGVS+   ++EI+ AY+++A+KYHPD+N  D  A   FKE+  +Y +L+D  KR
Sbjct: 3  QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR 62

Query: 79 RQYDTAGFEAVE 90
            YD  G  A E
Sbjct: 63 AAYDQYGHAAFE 74
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79 Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92 Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77 Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112 Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82 Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92 Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88 Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78 Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94 Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73 Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109 Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174 Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88 Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79 Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71 Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92 Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query410
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 99.96
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 99.86
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 99.83
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 99.83
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 99.82
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 99.82
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 99.81
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 99.81
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 99.8
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 99.8
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 99.8
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 99.79
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 99.79
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 99.78
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 99.77
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 99.77
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 99.76
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 99.73
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 99.7
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 99.69
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 99.68
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 99.67
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 99.64
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 99.64
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 99.64
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 99.64
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 99.62
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 99.62
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 99.61
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 99.61
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 99.61
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 99.57
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 99.57
2guz_A71 Mitochondrial import inner membrane translocase su 99.51
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 99.0
3agx_A181 DNAJ homolog subfamily B member 1; chaperone; 1.85 98.89
2q2g_A180 HSP40 protein, heat shock 40 kDa protein, putative 98.86
1c3g_A170 Heat shock protein 40; beta sheets, short helices, 98.6
2guz_B65 Mitochondrial import inner membrane translocase su 98.43
2ctt_A104 DNAJ homolog subfamily A member 3; ZING finger, be 97.25
3i38_A109 Putative chaperone DNAJ; structural genomics, prot 94.7
1xao_A121 YDJ1, mitochondrial protein import protein MAS5; b 92.3
2pzi_A681 Probable serine/threonine-protein kinase PKNG; ATP 87.19
1exk_A79 DNAJ protein; extended beta-hairpin, CXXCXGXG, zin 81.97
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
Probab=99.96  E-value=3.4e-31  Score=263.82  Aligned_cols=205  Identities=23%  Similarity=0.318  Sum_probs=64.7

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccccccccc-hh
Q 015278           17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESES-QE   95 (410)
Q Consensus        17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~~~-~~   95 (410)
                      ..+|||+||||+++||.+|||+|||+||++||||+|+ ++.|.++|++|++||+||+||.+|+.||.++......+. ..
T Consensus        26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~  104 (329)
T 3lz8_A           26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQ  104 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccc
Confidence            4579999999999999999999999999999999998 458899999999999999999999999998543211110 00


Q ss_pred             hh---hccccchhHHHHHHHHhccC-----------CcceeeeechhHHHHHhCCceeeeeccccccccccccccccccc
Q 015278           96 LE---LDLSSLGAVNTMFAALFSKL-----------GVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFY  161 (410)
Q Consensus        96 ~~---~d~s~~g~~~~iF~~fFg~~-----------G~~i~ttVs~t~LEea~nG~~~~~~L~~g~~vC~kcegq~a~~y  161 (410)
                      +.   ..+ +.+++.++|+.|||+.           |.++...+.++ |+++++|+.+...+..  .+            
T Consensus       105 ~~~~~~~f-~~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vs-leea~~G~~k~i~i~~--~v------------  168 (329)
T 3lz8_A          105 RQTHEQSY-SQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVF-LEETLAEQTRTISYNL--PV------------  168 (329)
T ss_dssp             ---------------------------------CCCCCCEEEEECCC-TTGGGSCEEEEEEEEE--EE------------
T ss_pred             cccccCCc-CCCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecc-hhhhhhccceEEEEEE--Ee------------
Confidence            00   001 1124678899999742           34555566665 6777776654333211  00            


Q ss_pred             ceeEeeeeccCCcEEEEeccCCCcceeeeeeccCCCcceeeeccccccCCceeeeceEEEeeeeeecCcccccccccCCC
Q 015278          162 SVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDP  241 (410)
Q Consensus       162 gv~i~~eqi~~G~v~qvqS~c~sKck~~~f~~~g~Gg~~~~~~eD~~k~gkvt~~~~~~L~~pv~~~~~g~~~~~~~kd~  241 (410)
                                         .|            +.|.              ++......|.|.|   .+|      +.+|
T Consensus       169 -------------------~~------------g~G~--------------v~~~~~~~l~V~I---P~G------v~~G  194 (329)
T 3lz8_A          169 -------------------YN------------VFGM--------------IESETPKTLNVKI---PAG------VVDG  194 (329)
T ss_dssp             -------------------CC------------SCC---------------CCEEEEEEEEEEE---CTT------CCTT
T ss_pred             -------------------ec------------CCeE--------------EEEecceEEEEeC---CCC------CCCC
Confidence                               01            1231              1111112344444   555      5555


Q ss_pred             CccccCC-----CCCCCccce-EEEeccce-eEEEeCCceeEeeeee-EEEeecCCchh
Q 015278          242 DAAFFKK-----LDGFQPCEI-TELKAGTH-VFAVYGDNFFKSASYM-IEALCAAPFTE  292 (410)
Q Consensus       242 ~~~~F~~-----l~g~~~~d~-~~l~~~~H-~F~r~Gdnl~~~~~is-~eaL~g~~~~~  292 (410)
                      +++.|..     .+|..+||+ ++|++..| +|.|.|+||+++++|+ .|||+|+....
T Consensus       195 ~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V  253 (329)
T 3lz8_A          195 QRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTV  253 (329)
T ss_dssp             CEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEE
T ss_pred             CEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEE
Confidence            5554441     356789999 99999999 9999999999999999 99999987654
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Back     alignment and structure
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Back     alignment and structure
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Back     alignment and structure
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 410
d1xbla_75 a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain 4e-19
d1wjza_94 a.2.3.1 (A:) CSL-type zinc finger-containing prote 1e-18
d1hdja_77 a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9 2e-17
d1nz6a_98 a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T 2e-16
d1fpoa176 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma 4e-15
d1fafa_79 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 5e-14
d1iura_88 a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human 4e-12
d1gh6a_114 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 1e-11
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75 Back     information, alignment and structure

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 78.9 bits (194), Expect = 4e-19
 Identities = 33/73 (45%), Positives = 49/73 (67%)

Query: 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDK 77
          ++D YE+LGVS+   ++EI+ AY+++A+KYHPD+N  D  A   FKE+  +Y +L+D  K
Sbjct: 2  KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61

Query: 78 RRQYDTAGFEAVE 90
          R  YD  G  A E
Sbjct: 62 RAAYDQYGHAAFE 74
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94 Back     information, alignment and structure
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77 Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79 Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query410
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 99.88
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 99.84
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 99.79
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 99.77
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 99.64
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 99.64
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 99.61
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 99.59
d1nlta280 Mitochondrial protein import protein mas5 (Hsp40, 94.04
d1c3ga290 Heat shock protein 40 Sis1 {Baker's yeast (Sacchar 92.99
d1c3ga180 Heat shock protein 40 Sis1 {Baker's yeast (Sacchar 91.79
d1nlta374 Mitochondrial protein import protein mas5 (Hsp40, 90.62
d1nlta174 Mitochondrial protein import protein mas5 (Hsp40, 82.93
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=7.4e-24  Score=165.77  Aligned_cols=72  Identities=44%  Similarity=0.835  Sum_probs=68.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccccc
Q 015278           18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV   89 (410)
Q Consensus        18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~   89 (410)
                      .+|||+||||+++||.+|||+|||+|+++||||++++++.+.+.|..|++||+||+||.+|..||.+|..++
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            579999999999999999999999999999999999888899999999999999999999999999997654
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure