Citrus Sinensis ID: 015283

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
Protein Sequence
MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHcccccccccccccEEEccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccHHHHcccEEEEEccccHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHHHHcccccEEEcccccccccccHHHHHHHHHHHHccccEEEEEccccccccccccccEEEEEcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHccEEEEcccccEEccccccccHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHcccccccccccccccccccHHHHHHHHcccccEEccccccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccHHHHcccEEEEEEEHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHcccEEEEEEcEEccccEEcHHHHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHHccEEEEEEcccccccccHHHHcHHHHHHHHcccccEEEEEcccccccHHHcEEEEEEEcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccEEEccccHHHHHHHHHHHcEEcccccEEEHHHcccccHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MVAAVNvsrfegvtmappdpilgvseafkadtdekklnlgvgayrteelqPYVLDVVKKAENLMlergenkeylpieGLAAFNKVTAELLfgadnsvlKEQRVATVQGLSGTGSLRLAAALIERYFPgakvlissptwgnhknifndarvpwseyryydpktvgldfEGMIADikaapggsfillhgcahnptgidptpeQWEKIADVIQEknhipffdvayqgfasgsldndassVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLarpmysnppvhgARIVANvvgnpalfDEWKAEMEMMAGRIKNVRQKLFDSlsakdksgkdWSFILRQIGMfsftglnkaqsdnmtnKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Flexible Loop (DISEMBL)
mvaavnvsrfegvtmappdpiLGVSEAFKADTDEKKLnlgvgayrteelqpyvLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATvqglsgtgSLRLAAALIERYFPGAKVLissptwgnhknifndarvpwsEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARpmysnppvhgaRIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSlsakdksgkdWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Low Complexity Region (SEG)
MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Disordered region (IsUnstruct)
********************ILGVSEAFK****EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS****SGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY****
Disordered Region (DISOPRED)
*********FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNV*
Disordered Region (DISEMBL)
MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Disordered Region (DISPRO)
*********F**VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	410	2.2.26 [Sep-21-2011]
P46248	453	Aspartate aminotransferas	yes	no	1.0	0.905	0.892	0.0
P26563	454	Aspartate aminotransferas	N/A	no	1.0	0.903	0.885	0.0
P37833	407	Aspartate aminotransferas	no	no	0.960	0.968	0.560	1e-134
P28734	405	Aspartate aminotransferas	N/A	no	0.960	0.972	0.570	1e-133
P28011	418	Aspartate aminotransferas	N/A	no	0.960	0.942	0.555	1e-131
P46645	405	Aspartate aminotransferas	no	no	0.960	0.972	0.545	1e-130
P46644	449	Aspartate aminotransferas	no	no	0.960	0.877	0.545	1e-129
Q54SF7	438	Aspartate aminotransferas	yes	no	0.956	0.894	0.556	1e-125
Q55F21	426	Aspartate aminotransferas	no	no	0.970	0.934	0.518	1e-123
P12344	430	Aspartate aminotransferas	yes	no	0.948	0.904	0.529	1e-120

>sp|P46248|AAT5_ARATH Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/410 (89%), Positives = 387/410 (94%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  AV  SRFEG+TMAPPDPILGVSEAFKADT+  KLNLGVGAYRTEELQPYVL+VVKKA
Sbjct: 44  MTVAVKPSRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKA 103

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERG+NKEYLPIEGLAAFNK TAELLFGA + V+KEQRVAT+QGLSGTGSLRLAAA
Sbjct: 104 ENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAA 163

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGAKV+ISSPTWGNHKNIFNDA+VPWSEYRYYDPKT+GLDFEGMIADIK AP G
Sbjct: 164 LIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEG 223

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SFILLHGCAHNPTGIDPTPEQW KIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLF
Sbjct: 224 SFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLF 283

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGME  VAQSYSKNLGLYAERIGA+NVVCSS+D A RVKSQLKR+ARPMYSNPPVHGA
Sbjct: 284 AERGMEFFVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGA 343

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVANVVG+  +F EWKAEMEMMAGRIK VRQ+L+DSL +KDKSGKDWSFIL+QIGMFSF
Sbjct: 344 RIVANVVGDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVSKDKSGKDWSFILKQIGMFSF 403

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNKAQSDNMT+KWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct: 404 TGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 453

Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp|P26563|AATM_LUPAN Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/410 (88%), Positives = 388/410 (94%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           MVAAVNVSRFEG+ MAPPDPILGVSEAF+ADT + KLNLGVGAYRTEELQPYVL VV KA
Sbjct: 45  MVAAVNVSRFEGIPMAPPDPILGVSEAFRADTSDAKLNLGVGAYRTEELQPYVLKVVNKA 104

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERG+NKEYL IEGLAAFNK TAELL GADN  +K+QRVATVQGLSGTGSLRL AA
Sbjct: 105 ENLMLERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAA 164

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGAKVLIS+PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI DIKAAP G
Sbjct: 165 LIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEG 224

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           +F+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLF
Sbjct: 225 TFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLF 284

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
             RG+E+LVAQSYSKNLGLYAERIGA+NV+ SS + AARVKSQLKR+ARPMYSNPPVHGA
Sbjct: 285 VARGLEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRIARPMYSNPPVHGA 344

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVA++VGNPALFDEWK EMEMMAGRIKNVRQ+L+DS+S+KDKSGKDWSFIL+QIGMFS+
Sbjct: 345 RIVADIVGNPALFDEWKVEMEMMAGRIKNVRQQLYDSISSKDKSGKDWSFILKQIGMFSY 404

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNK QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS+H VS
Sbjct: 405 TGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHYVS 454

Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.

Lupinus angustifolius (taxid: 3871)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P37833|AATC_ORYSJ Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1

 Score =  477 bits (1228), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 222/396 (56%), Positives = 295/396 (74%), Gaps = 2/396 (0%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S F G+  AP DPILGV+ A+  D    K+NLGVGAYRTEE +P VL+VV++AE +++  
Sbjct: 5   SVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINN 64

Query: 68  GEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++
Sbjct: 65  PSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHY 124

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
               + I  PTWGNH  +F  A +    YRYYDP T GLDF+G++ D+ +AP G+ +LLH
Sbjct: 125 HERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLH 184

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DPT +QWE+I  +++ K  +PFFD AYQGFASGSLD DA SVR+F   G E
Sbjct: 185 ACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGE 244

Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           LL+AQSY+KN+GLY ER+GA+++VC S+D+A RV+SQLK + RPMYSNPP+HGA IVA +
Sbjct: 245 LLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVATI 304

Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + + A+F+EW  E++ MA RI ++RQ+LFD+L  ++  G DWS I++QIGMF+FTGLN  
Sbjct: 305 LKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPG-DWSHIIKQIGMFTFTGLNSD 363

Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           Q   M  ++H+YMT DGRIS+AGLS     +LADAI
Sbjct: 364 QVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAI 399

Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P28734|AATC_DAUCA Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1

 Score =  476 bits (1224), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 226/396 (57%), Positives = 298/396 (75%), Gaps = 2/396 (0%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-E 66
           S F  V  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VL+VVKKAE +++ +
Sbjct: 3   SVFANVVRAPEDPILGVTVAYHKDQSPNKLNLGVGAYRTEEGKPLVLNVVKKAEQMLVND 62

Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
           +   KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++
Sbjct: 63  QSRVKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHY 122

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
               V I  PTWGNH  IF  A +    YRYY+P+T GLDFEGM+ D+ +AP G+ +LLH
Sbjct: 123 HEHTVYIPQPTWGNHPKIFTLAGLSVKTYRYYNPETRGLDFEGMLEDLGSAPLGAIVLLH 182

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DPT EQWE+I  +++ K+ +PFFD AYQGFASGSLD DA SVR+F   G E
Sbjct: 183 ACAHNPTGVDPTIEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDADAQSVRIFVADGGE 242

Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
            L AQSY+KN+GLY ER+GA+++VC ++D+A++V+SQLK + RPMYS+PP+HGA IVA +
Sbjct: 243 CLAAQSYAKNMGLYGERVGALSIVCKTADVASKVESQLKLVIRPMYSSPPLHGASIVAAI 302

Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + +  L++EW  E++ MA RI ++RQ+LF++L AK   G DWS I++QIGMF+FTGLN  
Sbjct: 303 LKDGDLYNEWTLELKAMADRIISMRQELFNALQAKGTPG-DWSHIVKQIGMFTFTGLNSE 361

Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           Q   MTN++H+Y+T DGRIS+AGLS     +LADAI
Sbjct: 362 QVTFMTNEYHIYLTSDGRISMAGLSSRTVPHLADAI 397

Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.

Daucus carota (taxid: 4039)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P28011|AAT1_MEDSA Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2

 Score =  468 bits (1204), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/396 (55%), Positives = 294/396 (74%), Gaps = 2/396 (0%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-E 66
           S F  +  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VLDVV++ E  +L +
Sbjct: 16  SVFAHLVRAPEDPILGVTVAYNKDPSPIKLNLGVGAYRTEEGKPLVLDVVRRVERQLLND 75

Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
              NKEY+PI GLA FNK++A+L+FGAD+  ++E RV TVQGLSGTGSLR+    + +++
Sbjct: 76  MSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHY 135

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
               + + +PTWGNH  +FN A +    YRYY P T GLDF+G++ D+ +AP GS +LLH
Sbjct: 136 HQRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLLH 195

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DPT EQWE+I  +I+ K+ +PFFD AYQGFASGSLD DA  VRLF   G E
Sbjct: 196 ACAHNPTGVDPTLEQWEQIRQLIRSKSLLPFFDSAYQGFASGSLDADAQPVRLFVADGGE 255

Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           LLVAQSY+KN+GLY ER+GA+++V  S+D+++RV+SQLK + RPMYS+PP+HGA IVA +
Sbjct: 256 LLVAQSYAKNMGLYGERVGALSIVSKSADVSSRVESQLKLVIRPMYSSPPIHGASIVAAI 315

Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + +  L+++W  E++ MA RI N+RQ+LFD+L A+   G DWS I++QIGMF+FTGLN  
Sbjct: 316 LKDRDLYNDWTIELKAMADRIINMRQQLFDALRARGTPG-DWSHIIKQIGMFTFTGLNPE 374

Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           Q   +T ++H+Y+T DGRIS+AGLS     +LA AI
Sbjct: 375 QVSILTKEYHIYLTSDGRISMAGLSSKTVPHLAHAI 410

Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P46645|AAT2_ARATH Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2

 Score =  466 bits (1200), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 216/396 (54%), Positives = 296/396 (74%), Gaps = 2/396 (0%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAEN-LMLE 66
           S F  V  AP DPILGV+ A+  D    K+NLGVGAYRTEE +P VLDVV+KAE  L+ +
Sbjct: 3   SVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVND 62

Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               KEY+PI G++ FNK++A+L+ GAD+  + E RV TVQ LSGTGSLR+ A  ++ ++
Sbjct: 63  PSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHY 122

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
             + + I  PTWGNH  +FN A +    +RYYDP T GLDF+G++ D+ AAP G+ +LLH
Sbjct: 123 HQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLH 182

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DPT EQWE+I  +++ K+ +PFFD AYQGFASGSLD DA SVR F   G E
Sbjct: 183 ACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDTDAQSVRTFVADGGE 242

Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
            L+AQSY+KN+GLY ER+GA+++VC S+D+A++V+SQ+K + RPMYS+PP+HGA IVA +
Sbjct: 243 CLIAQSYAKNMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVATI 302

Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + +  +++ W  E++ MA RIK++RQ+LF+++ A+   G DWS I++QIGMF+FTGLNK 
Sbjct: 303 LKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPG-DWSHIIKQIGMFTFTGLNKE 361

Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           Q + MT ++H+YMT DGRIS+AGLS     +LADA+
Sbjct: 362 QVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAM 397

Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P46644|AAT3_ARATH Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1

 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/396 (54%), Positives = 290/396 (73%), Gaps = 2/396 (0%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-E 66
           S F  +  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VL+VV+KAE  ++ +
Sbjct: 47  SVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLIND 106

Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
           R   KEYLPI GL  FNK++A+L+ GAD+  ++E R+ TV+ LSGTGSLR+    + +++
Sbjct: 107 RTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHY 166

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
               + I+ PTWGNH  IF  A +    YRYYDP T GL+F+G++ D+ AA  GS +LLH
Sbjct: 167 HQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLH 226

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DPT +QWE+I  +++ K  +PFFD AYQGFASGSLD DA  +R+F   G E
Sbjct: 227 ACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGGE 286

Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
            LVAQSY+KN+GLY ER+GA+++VC S+D+A RV+SQLK + RPMYS+PP+HGA IVA +
Sbjct: 287 CLVAQSYAKNMGLYGERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAVI 346

Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + +  LF+EW  E++ MA RI ++R++LF++L  +   G DWS I++QIGMF+FTGLN A
Sbjct: 347 LRDKNLFNEWTLELKAMADRIISMRKQLFEALRTRGTPG-DWSHIIKQIGMFTFTGLNPA 405

Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           Q   MT ++H+YMT DGRIS+AGLS     +LADAI
Sbjct: 406 QVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAI 441

Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q54SF7|AATC_DICDI Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum GN=aatB PE=3 SV=1

 Score =  449 bits (1156), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 221/397 (55%), Positives = 280/397 (70%), Gaps = 5/397 (1%)

Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           F  V + P DPILGVS AFKADTD +K++  VGAYR E  +PYVL  V +AE  +L  G 
Sbjct: 41  FANVPLGPVDPILGVSTAFKADTDPRKVDTSVGAYRDENGKPYVLKCVFEAEKRLL--GA 98

Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP-G 128
            KEYLPI+G+  FNK++A+LL+G D  V KE+R+ TVQ LSGTG+LR+    I +Y P G
Sbjct: 99  PKEYLPIDGIPEFNKLSAKLLYG-DAMVGKEKRMVTVQALSGTGALRIGIIFIRKYLPAG 157

Query: 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188
             V IS P+W NH NI  ++ V  +EY YYDPKT GLDF GMI D++AAP GS  +LH C
Sbjct: 158 TVVYISRPSWTNHHNICKESGVQSAEYAYYDPKTKGLDFTGMINDMRAAPNGSVFVLHLC 217

Query: 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248
           AHNPTG+DPT EQW  IADV++EKNHIPF D AYQG+ASG LD DA S RLF  RG E+ 
Sbjct: 218 AHNPTGVDPTHEQWNIIADVMREKNHIPFMDCAYQGYASGDLDYDAYSARLFLNRGFEMF 277

Query: 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308
            AQSYSKN GLY ER GA+ +V    D+  ++ SQLK   R MYS+PP HGAR+V  V+ 
Sbjct: 278 SAQSYSKNFGLYGERTGALTIVSHREDVIPKMLSQLKMDIRAMYSSPPTHGARLVTTVLS 337

Query: 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQS 368
           +P L   W  E++ M+GRIK+VRQK+ D+L A+   G +W  I+ QIGMF++TGL K Q 
Sbjct: 338 DPELTALWVKELKEMSGRIKDVRQKVLDALIARKVPG-NWEHIVNQIGMFTYTGLTKPQV 396

Query: 369 DNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS 405
           D + NK+H+Y+   GR+SLAGL+    +Y ADAI+D+
Sbjct: 397 DILVNKYHIYLLGSGRVSLAGLNNKNIDYFADAILDA 433

Plays a key role in amino acid metabolism.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q55F21|AATM_DICDI Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1

 Score =  440 bits (1132), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/399 (51%), Positives = 278/399 (69%), Gaps = 1/399 (0%)

Query: 4   AVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENL 63
           + N + +  V   P DPILGVS A+  DT   K+NLGVGAYR E  +PYVLD VKKA+  
Sbjct: 22  STNTNWWANVQKGPEDPILGVSIAYNKDTSPSKINLGVGAYRDENGKPYVLDCVKKADKK 81

Query: 64  MLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 123
           + E   + EY PI G+AAFN++ A+L  G +   +KE+R+ATVQ +SGTG+LR+AA    
Sbjct: 82  IYEANVDHEYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFA 141

Query: 124 RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183
           R+  G    + +PTWGNH  IFNDA +P   Y YY+P T GL+FE M  DI AAP GS I
Sbjct: 142 RFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSII 201

Query: 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243
           LLH CAHNPTG+DPT EQW+KI+++ +E+ H   FD AYQGFASGS + DA++VR+F   
Sbjct: 202 LLHACAHNPTGVDPTAEQWKKISEICKERGHFVLFDFAYQGFASGSPEKDAAAVRMFVED 261

Query: 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV 303
           G  + + QS++KN GLY ERIGA +++  +SD A  V+SQLK L RPMYSNPPV+GAR+V
Sbjct: 262 GHNIALCQSFAKNFGLYGERIGAFSILTETSDQALNVESQLKILIRPMYSNPPVYGARLV 321

Query: 304 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL 363
             ++ +  L +EW++E++ MA RI N+R++L   L  K  S +DWS I  QIGMF FTGL
Sbjct: 322 QAILKDKELTNEWRSEVKGMADRIINMREQLVKYLK-KHGSTRDWSHITTQIGMFCFTGL 380

Query: 364 NKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
              Q D + N++H+Y+T++GRIS+AG++    EYLA A+
Sbjct: 381 TPEQVDRLANEYHIYLTRNGRISIAGINSTNVEYLAKAM 419

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P12344|AATM_BOVIN Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2

 Score =  433 bits (1114), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/391 (52%), Positives = 274/391 (70%), Gaps = 2/391 (0%)

Query: 13  VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE 72
           V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KE
Sbjct: 36  VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKE 95

Query: 73  YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-V 131
           YLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V
Sbjct: 96  YLPIAGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGASFLQRFFKFSRDV 155

Query: 132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191
            +  PTWGNH  IF DA +    YRYYDPKT G DF G I DI   P  S ILLH CAHN
Sbjct: 156 FLPKPTWGNHTPIFRDAGMQLQSYRYYDPKTCGFDFTGAIEDISKIPAQSVILLHACAHN 215

Query: 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251
           PTG+DP PEQW+++A V+++ N   FFD+AYQGFASG  + DA +VR F  +G+ + + Q
Sbjct: 216 PTGVDPRPEQWKEMATVVKKNNLFAFFDMAYQGFASGDGNKDAWAVRHFIEQGINVCLCQ 275

Query: 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311
           SY+KN+GLY ER+GA  VVC  ++ A RV+SQLK L RPMYSNPP++GARI + ++ +P 
Sbjct: 276 SYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPMYSNPPINGARIASTILTSPD 335

Query: 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNM 371
           L  +W  E++ MA RI ++R +L  +L  K+ S  +W  I+ QIGMF +TGL   Q + +
Sbjct: 336 LRKQWLHEVKGMADRIISMRTQLVSNLK-KEGSSHNWQHIIDQIGMFCYTGLKPEQVERL 394

Query: 372 TNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           T ++ +YMTKDGRIS+AG++     YLA AI
Sbjct: 395 TKEFSIYMTKDGRISVAGVTSGNVAYLAHAI 425

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
224143258	466	predicted protein [Populus trichocarpa]	1.0	0.879	0.939	0.0
224092554	466	predicted protein [Populus trichocarpa]	1.0	0.879	0.926	0.0
255548798	464	aspartate aminotransferase, putative [Ri	1.0	0.883	0.917	0.0
449441882	464	PREDICTED: aspartate aminotransferase, c	0.997	0.881	0.916	0.0
225430398	462	PREDICTED: aspartate aminotransferase, c	1.0	0.887	0.914	0.0
147766607	462	hypothetical protein VITISV_000267 [Viti	1.0	0.887	0.912	0.0
81074221	462	aspartate aminotransferase-like [Solanum	1.0	0.887	0.895	0.0
297798764	453	hypothetical protein ARALYDRAFT_491537 [	1.0	0.905	0.897	0.0
777387	455	aspartate aminotransferase [Medicago sat	1.0	0.901	0.885	0.0
15236129	453	aspartate aminotransferase [Arabidopsis	1.0	0.905	0.892	0.0

>gi|224143258|ref|XP_002324896.1| predicted protein [Populus trichocarpa] gi|222866330|gb|EEF03461.1| predicted protein [Populus trichocarpa]

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/410 (93%), Positives = 399/410 (97%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  AVNVSRFEG+ MAPPDPILGVSEAF+AD D KKLNLGVGAYRTEELQPYVLDVVKKA
Sbjct: 57  MTVAVNVSRFEGIAMAPPDPILGVSEAFRADIDVKKLNLGVGAYRTEELQPYVLDVVKKA 116

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERGENKEYL IEGLAAFNKVTAELLFGADN V+++QRVATVQGLSGTGSLRLAAA
Sbjct: 117 ENLMLERGENKEYLAIEGLAAFNKVTAELLFGADNQVIEQQRVATVQGLSGTGSLRLAAA 176

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGA+VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI+DIKAAP G
Sbjct: 177 LIERYFPGAQVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMISDIKAAPEG 236

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SF+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DASSVRLF
Sbjct: 237 SFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDADASSVRLF 296

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGMELLVAQSYSKNLGLYAERIGA+NVVCSS+D AARVKSQLKR+ARPMYSNPPVHGA
Sbjct: 297 AARGMELLVAQSYSKNLGLYAERIGAINVVCSSADAAARVKSQLKRIARPMYSNPPVHGA 356

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVANVVG+PALF+EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL+QIGMFSF
Sbjct: 357 RIVANVVGDPALFNEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILKQIGMFSF 416

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct: 417 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 466

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092554|ref|XP_002309659.1| predicted protein [Populus trichocarpa] gi|222855635|gb|EEE93182.1| predicted protein [Populus trichocarpa]

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/410 (92%), Positives = 398/410 (97%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  AVNVSRFEG+ MAPPDPILGVSEAF+ADTD KKLNLGVGAYRTEELQPYVLDVVKKA
Sbjct: 57  MTVAVNVSRFEGIAMAPPDPILGVSEAFRADTDVKKLNLGVGAYRTEELQPYVLDVVKKA 116

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN V+K+QRVATVQGLSGTGSLRLAAA
Sbjct: 117 ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNPVIKQQRVATVQGLSGTGSLRLAAA 176

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGA+VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI+DIKAAP G
Sbjct: 177 LIERYFPGAQVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMISDIKAAPEG 236

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SF+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNH+PFFDVAYQGFASGSLD DASSVRLF
Sbjct: 237 SFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHVPFFDVAYQGFASGSLDADASSVRLF 296

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGMELL+AQSYSKNLGLYAERIGA+NVVCSS+D AARVKSQLKR+ARPMYSNPPVHGA
Sbjct: 297 AARGMELLIAQSYSKNLGLYAERIGAINVVCSSADAAARVKSQLKRIARPMYSNPPVHGA 356

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVANVVG+P LF+EWK EMEM+AGRIKNVRQKLFDSLSAKDKSGKDWSFIL+QIGMFSF
Sbjct: 357 RIVANVVGDPILFNEWKEEMEMLAGRIKNVRQKLFDSLSAKDKSGKDWSFILKQIGMFSF 416

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNK QS+NMTNKWHVYMT+DGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct: 417 TGLNKTQSENMTNKWHVYMTRDGRISLAGLSLAKCEYLADAIIDSYHNVS 466

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548798|ref|XP_002515455.1| aspartate aminotransferase, putative [Ricinus communis] gi|223545399|gb|EEF46904.1| aspartate aminotransferase, putative [Ricinus communis]

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/410 (91%), Positives = 394/410 (96%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M AAVN+SRFEG+TMA PDPILGVSEAF+AD D KKLNLGVGAYRTEEL PYVLDVVKKA
Sbjct: 55  MTAAVNISRFEGITMALPDPILGVSEAFRADNDAKKLNLGVGAYRTEELHPYVLDVVKKA 114

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN V+ +QRVATVQGLSGTGSLRLAAA
Sbjct: 115 ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNPVINQQRVATVQGLSGTGSLRLAAA 174

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYF GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP+TVGLDFEGMI+DIKAAP G
Sbjct: 175 LIERYFLGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPRTVGLDFEGMISDIKAAPEG 234

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SF+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLF
Sbjct: 235 SFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDADAASVRLF 294

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGMELLVAQSYSKNLGLYAERIGA+NVVCSS+D AARVKSQLKR+ARPMYSNPPVHGA
Sbjct: 295 AARGMELLVAQSYSKNLGLYAERIGALNVVCSSADAAARVKSQLKRIARPMYSNPPVHGA 354

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVANVVG+ +LF+EWK EMEMMAGRIK VRQKL+DSLSAKDKSGKDWSFIL+QIGMFS+
Sbjct: 355 RIVANVVGDQSLFNEWKDEMEMMAGRIKGVRQKLYDSLSAKDKSGKDWSFILKQIGMFSY 414

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNK QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct: 415 TGLNKTQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 464

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441882|ref|XP_004138711.1| PREDICTED: aspartate aminotransferase, chloroplastic-like [Cucumis sativus] gi|449499236|ref|XP_004160763.1| PREDICTED: aspartate aminotransferase, chloroplastic-like [Cucumis sativus]

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/409 (91%), Positives = 395/409 (96%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           MVA+VNVSRFEG+TMAPPDPILGVSEAFKADT   KLNLGVGAYRTEELQPYVLDVVKK 
Sbjct: 55  MVASVNVSRFEGITMAPPDPILGVSEAFKADTHGNKLNLGVGAYRTEELQPYVLDVVKKV 114

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           E LMLERG+NKEYLPIEGLAAFNK TAELLFGADN V+K+QRVAT+QGLSGTGSLRLAAA
Sbjct: 115 EALMLERGDNKEYLPIEGLAAFNKATAELLFGADNPVIKQQRVATIQGLSGTGSLRLAAA 174

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI+DIKAAP G
Sbjct: 175 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMISDIKAAPEG 234

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SF+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DASSVRLF
Sbjct: 235 SFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDADASSVRLF 294

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RG+ELLVAQSYSKNLGLYAERIGA+NVVC+S+D A RVKSQLKRLARPMYSNPPVHGA
Sbjct: 295 AARGLELLVAQSYSKNLGLYAERIGAINVVCTSADAAIRVKSQLKRLARPMYSNPPVHGA 354

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVAN+VG+PALF+EWKAEMEMMAGRIKNVRQKL+DSL AKDKSGKDWSFIL+QIGMFSF
Sbjct: 355 RIVANIVGDPALFNEWKAEMEMMAGRIKNVRQKLYDSLCAKDKSGKDWSFILKQIGMFSF 414

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNV 409
           TGL+K QSDNMT+KWHVYMTKDGRISLAGLSLAKCEYLADAIIDS+HNV
Sbjct: 415 TGLSKVQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHNV 463

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430398|ref|XP_002285385.1| PREDICTED: aspartate aminotransferase, chloroplastic [Vitis vinifera] gi|296082090|emb|CBI21095.3| unnamed protein product [Vitis vinifera]

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/410 (91%), Positives = 394/410 (96%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  AVN SRFEGVTMAPPDPILGVSEAF+AD  E KLNLGVGAYRTEELQPYVL+VVKKA
Sbjct: 53  MAIAVNTSRFEGVTMAPPDPILGVSEAFRADNSEMKLNLGVGAYRTEELQPYVLNVVKKA 112

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERGENKEYLPIEGLAAFNKVTAELLFGA N V+++QRVATVQGLSGTGSLRLAAA
Sbjct: 113 ENLMLERGENKEYLPIEGLAAFNKVTAELLFGAGNPVIEQQRVATVQGLSGTGSLRLAAA 172

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF+GMI+DIKAAP G
Sbjct: 173 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFDGMISDIKAAPEG 232

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SF+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DASSVRLF
Sbjct: 233 SFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDADASSVRLF 292

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGMELLVAQSYSKNLGLYAERIGA+NVVCSS+D AARVKSQLKR+ARPMYSNPP+HGA
Sbjct: 293 AARGMELLVAQSYSKNLGLYAERIGAINVVCSSADAAARVKSQLKRIARPMYSNPPIHGA 352

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVANVVG+PALF+EWK EME+MAGRIKNVRQKLFDSLSAKDK GKDWSFIL+QIGMFSF
Sbjct: 353 RIVANVVGDPALFNEWKEEMELMAGRIKNVRQKLFDSLSAKDKCGKDWSFILKQIGMFSF 412

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGL+K QS+NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS+H VS
Sbjct: 413 TGLSKVQSENMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHCVS 462

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147766607|emb|CAN76227.1| hypothetical protein VITISV_000267 [Vitis vinifera]

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/410 (91%), Positives = 394/410 (96%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  AVN SRFEGVTMAPPDPILGVSEAF+AD  E KLNLGVGAYRTEELQPYVL+VVKKA
Sbjct: 53  MAIAVNTSRFEGVTMAPPDPILGVSEAFRADNSEMKLNLGVGAYRTEELQPYVLNVVKKA 112

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLML+RGENKEYLPIEGLAAFNKVTAELLFGA N V+++QRVATVQGLSGTGSLRLAAA
Sbjct: 113 ENLMLKRGENKEYLPIEGLAAFNKVTAELLFGAGNPVIEQQRVATVQGLSGTGSLRLAAA 172

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF+GMI+DIKAAP G
Sbjct: 173 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFDGMISDIKAAPEG 232

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SF+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DASSVRLF
Sbjct: 233 SFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDADASSVRLF 292

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGMELLVAQSYSKNLGLYAERIGA+NVVCSS+D AARVKSQLKR+ARPMYSNPP+HGA
Sbjct: 293 AARGMELLVAQSYSKNLGLYAERIGAINVVCSSADAAARVKSQLKRIARPMYSNPPIHGA 352

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVANVVG+PALF+EWK EME+MAGRIKNVRQKLFDSLSAKDK GKDWSFIL+QIGMFSF
Sbjct: 353 RIVANVVGDPALFNEWKEEMELMAGRIKNVRQKLFDSLSAKDKCGKDWSFILKQIGMFSF 412

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGL+K QS+NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS+H VS
Sbjct: 413 TGLSKVQSENMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHCVS 462

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|81074221|gb|ABB55364.1| aspartate aminotransferase-like [Solanum tuberosum]

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/410 (89%), Positives = 390/410 (95%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  AVNVSRFEG+TMAPPDPILGVSEAFKADT+E KLNLGVGAYRTE+LQPYVL+VVKKA
Sbjct: 53  MAVAVNVSRFEGITMAPPDPILGVSEAFKADTNELKLNLGVGAYRTEDLQPYVLNVVKKA 112

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENL+LERGENKEYLPIEGLAAFNKVTAELLFG DN VL++QRVAT+QGLSGTGSLR+AAA
Sbjct: 113 ENLILERGENKEYLPIEGLAAFNKVTAELLFGKDNPVLQQQRVATIQGLSGTGSLRIAAA 172

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPG+K+LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF GMI DIKAAP G
Sbjct: 173 LIERYFPGSKILISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFAGMIEDIKAAPEG 232

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DASSVR+F
Sbjct: 233 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDASSVRMF 292

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGMELLVAQSYSKNLGLY ERIGA+NV+CSS+  A RVKSQLKRLARPMYSNPP+HGA
Sbjct: 293 AARGMELLVAQSYSKNLGLYGERIGAINVLCSSAYAATRVKSQLKRLARPMYSNPPIHGA 352

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           +IVANVVG P LF EWK EMEMMAGRIK+VRQKL+DSLSAKDKSGKDWSFIL+QIGMFSF
Sbjct: 353 KIVANVVGTPELFSEWKEEMEMMAGRIKSVRQKLYDSLSAKDKSGKDWSFILKQIGMFSF 412

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNKAQS+NM +KWHVYMTKDGRISLAGLS AKCEYLADAIIDSY+NVS
Sbjct: 413 TGLNKAQSENMADKWHVYMTKDGRISLAGLSAAKCEYLADAIIDSYYNVS 462

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798764|ref|XP_002867266.1| hypothetical protein ARALYDRAFT_491537 [Arabidopsis lyrata subsp. lyrata] gi|297313102|gb|EFH43525.1| hypothetical protein ARALYDRAFT_491537 [Arabidopsis lyrata subsp. lyrata]

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/410 (89%), Positives = 388/410 (94%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  AV  SRFEG+TMAPPDPILGVSEAFKADT+E KLNLGVGAYRTEELQPYVL+VVKKA
Sbjct: 44  MTVAVKPSRFEGITMAPPDPILGVSEAFKADTNEMKLNLGVGAYRTEELQPYVLNVVKKA 103

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERG+NKEYLPIEGLAAFNK TAELLFGA + V+KEQRVAT+QGLSGTGSLRLAAA
Sbjct: 104 ENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAA 163

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGAKV+ISSPTWGNHKNIFNDA+VPWSEYRYYDPKT+GLDFEGMIADIK AP G
Sbjct: 164 LIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEG 223

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SFILLHGCAHNPTGIDPTPEQW KIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLF
Sbjct: 224 SFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLF 283

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGME  VAQSYSKNLGLYAERIGA+NVVCSS+D A RVKSQLKR+ARPMYSNPPVHGA
Sbjct: 284 AERGMEFFVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGA 343

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVANVVG+  +F EWKAEMEMMAGRIK VRQKL+DSL +KDKSGKDWSFIL+QIGMFSF
Sbjct: 344 RIVANVVGDATMFSEWKAEMEMMAGRIKTVRQKLYDSLVSKDKSGKDWSFILKQIGMFSF 403

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNKAQSDNMT+KWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct: 404 TGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 453

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|777387|gb|AAB46611.1| aspartate aminotransferase [Medicago sativa]

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/410 (88%), Positives = 388/410 (94%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  A NVSRFEG+ MAPPDPILGVSEAFKADT++ KLNLGVGAYRTEELQPYVL+VVKKA
Sbjct: 46  MAVATNVSRFEGIPMAPPDPILGVSEAFKADTNDVKLNLGVGAYRTEELQPYVLNVVKKA 105

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERGENKEYLPIEGLAAFNK TAELL GADN  +K+QRVATVQGLSGTGSLRL AA
Sbjct: 106 ENLMLERGENKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAA 165

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGAKVLIS+PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI DIK+AP G
Sbjct: 166 LIERYFPGAKVLISNPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEG 225

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           +F+LLHGCAHNPTGIDPTPEQWEKIADVIQ+KNH PFFDVAYQGFASGSLD DA+SVRLF
Sbjct: 226 TFVLLHGCAHNPTGIDPTPEQWEKIADVIQQKNHFPFFDVAYQGFASGSLDEDAASVRLF 285

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
            +RGME+LVAQSYSKNLGLYAER+GA+NV+ SS + A RVKSQLKRLARPMYSNPPVHGA
Sbjct: 286 ESRGMEVLVAQSYSKNLGLYAERVGAINVISSSPESATRVKSQLKRLARPMYSNPPVHGA 345

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVAN+VG PALFDEWKAEMEMMAGRIK VRQ L+DS+S+KDKSGKDWSFIL+QIGMFSF
Sbjct: 346 RIVANIVGTPALFDEWKAEMEMMAGRIKTVRQALYDSISSKDKSGKDWSFILKQIGMFSF 405

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNK+QSDNMTNKWH+YMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct: 406 TGLNKSQSDNMTNKWHIYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 455

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236129|ref|NP_194927.1| aspartate aminotransferase [Arabidopsis thaliana] gi|30689228|ref|NP_849483.1| aspartate aminotransferase [Arabidopsis thaliana] gi|20532373|sp|P46248.2|AAT5_ARATH RecName: Full=Aspartate aminotransferase, chloroplastic; AltName: Full=Transaminase A; Flags: Precursor gi|2827636|emb|CAA16590.1| aspartate aminotransferase [Arabidopsis thaliana] gi|7270103|emb|CAB79917.1| aspartate aminotransferase [Arabidopsis thaliana] gi|15451160|gb|AAK96851.1| aspartate aminotransferase [Arabidopsis thaliana] gi|20148355|gb|AAM10068.1| aspartate aminotransferase [Arabidopsis thaliana] gi|222423613|dbj|BAH19775.1| AT4G31990 [Arabidopsis thaliana] gi|332660587|gb|AEE85987.1| aspartate aminotransferase [Arabidopsis thaliana] gi|332660588|gb|AEE85988.1| aspartate aminotransferase [Arabidopsis thaliana]

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/410 (89%), Positives = 387/410 (94%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M  AV  SRFEG+TMAPPDPILGVSEAFKADT+  KLNLGVGAYRTEELQPYVL+VVKKA
Sbjct: 44  MTVAVKPSRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKA 103

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           ENLMLERG+NKEYLPIEGLAAFNK TAELLFGA + V+KEQRVAT+QGLSGTGSLRLAAA
Sbjct: 104 ENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAA 163

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
           LIERYFPGAKV+ISSPTWGNHKNIFNDA+VPWSEYRYYDPKT+GLDFEGMIADIK AP G
Sbjct: 164 LIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEG 223

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SFILLHGCAHNPTGIDPTPEQW KIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLF
Sbjct: 224 SFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLF 283

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A RGME  VAQSYSKNLGLYAERIGA+NVVCSS+D A RVKSQLKR+ARPMYSNPPVHGA
Sbjct: 284 AERGMEFFVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGA 343

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVANVVG+  +F EWKAEMEMMAGRIK VRQ+L+DSL +KDKSGKDWSFIL+QIGMFSF
Sbjct: 344 RIVANVVGDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVSKDKSGKDWSFILKQIGMFSF 403

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNKAQSDNMT+KWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct: 404 TGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 453

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
UNIPROTKB|P26563	454	P26563 "Aspartate aminotransfe	1.0	0.903	0.885	5.3e-198
TAIR|locus:2116682	462	ASP5 "aspartate aminotransfera	0.995	0.883	0.892	1.8e-197
UNIPROTKB|P37833	407	LOC_Os01g55540 "Aspartate amin	0.960	0.968	0.560	6.7e-120
UNIPROTKB|P28734	405	P28734 "Aspartate aminotransfe	0.960	0.972	0.570	2.9e-119
TAIR|locus:2180826	405	ASP2 "aspartate aminotransfera	0.960	0.972	0.545	8.8e-118
TAIR|locus:2144226	449	ASP3 "aspartate aminotransfera	0.960	0.877	0.545	2.4e-115
DICTYBASE|DDB_G0282493	438	aatB "aspartate transaminase"	0.956	0.894	0.556	1.9e-113
DICTYBASE|DDB_G0268664	426	aatA "aspartate transaminase"	0.970	0.934	0.518	1.4e-110
UNIPROTKB|P12344	430	GOT2 "Aspartate aminotransfera	0.948	0.904	0.529	1.9e-108
MGI|MGI:95792	430	Got2 "glutamate oxaloacetate t	0.948	0.904	0.534	1.9e-108

UNIPROTKB|P26563 P26563 "Aspartate aminotransferase P2, mitochondrial" [Lupinus angustifolius (taxid:3871)]

 Score = 1917 (679.9 bits), Expect = 5.3e-198, P = 5.3e-198
 Identities = 363/410 (88%), Positives = 388/410 (94%)

Query:     1 MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
             MVAAVNVSRFEG+ MAPPDPILGVSEAF+ADT + KLNLGVGAYRTEELQPYVL VV KA
Sbjct:    45 MVAAVNVSRFEGIPMAPPDPILGVSEAFRADTSDAKLNLGVGAYRTEELQPYVLKVVNKA 104

Query:    61 ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
             ENLMLERG+NKEYL IEGLAAFNK TAELL GADN  +K+QRVATVQGLSGTGSLRL AA
Sbjct:   105 ENLMLERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAA 164

Query:   121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
             LIERYFPGAKVLIS+PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI DIKAAP G
Sbjct:   165 LIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEG 224

Query:   181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
             +F+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLF
Sbjct:   225 TFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLF 284

Query:   241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
               RG+E+LVAQSYSKNLGLYAERIGA+NV+ SS + AARVKSQLKR+ARPMYSNPPVHGA
Sbjct:   285 VARGLEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRIARPMYSNPPVHGA 344

Query:   301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
             RIVA++VGNPALFDEWK EMEMMAGRIKNVRQ+L+DS+S+KDKSGKDWSFIL+QIGMFS+
Sbjct:   345 RIVADIVGNPALFDEWKVEMEMMAGRIKNVRQQLYDSISSKDKSGKDWSFILKQIGMFSY 404

Query:   361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
             TGLNK QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS+H VS
Sbjct:   405 TGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHYVS 454

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

TAIR|locus:2116682 ASP5 "aspartate aminotransferase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1912 (678.1 bits), Expect = 1.8e-197, P = 1.8e-197
 Identities = 364/408 (89%), Positives = 385/408 (94%)

Query:     1 MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
             M  AV  SRFEG+TMAPPDPILGVSEAFKADT+  KLNLGVGAYRTEELQPYVL+VVKKA
Sbjct:    44 MTVAVKPSRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKA 103

Query:    61 ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
             ENLMLERG+NKEYLPIEGLAAFNK TAELLFGA + V+KEQRVAT+QGLSGTGSLRLAAA
Sbjct:   104 ENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAA 163

Query:   121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
             LIERYFPGAKV+ISSPTWGNHKNIFNDA+VPWSEYRYYDPKT+GLDFEGMIADIK AP G
Sbjct:   164 LIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEG 223

Query:   181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
             SFILLHGCAHNPTGIDPTPEQW KIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLF
Sbjct:   224 SFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLF 283

Query:   241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
             A RGME  VAQSYSKNLGLYAERIGA+NVVCSS+D A RVKSQLKR+ARPMYSNPPVHGA
Sbjct:   284 AERGMEFFVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGA 343

Query:   301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
             RIVANVVG+  +F EWKAEMEMMAGRIK VRQ+L+DSL +KDKSGKDWSFIL+QIGMFSF
Sbjct:   344 RIVANVVGDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVSKDKSGKDWSFILKQIGMFSF 403

Query:   361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHN 408
             TGLNKAQSDNMT+KWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHN
Sbjct:   404 TGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHN 451

GO:0003824 "catalytic activity" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0033853 "aspartate-prephenate aminotransferase activity" evidence=IDA

GO:0033854 "glutamate-prephenate aminotransferase activity" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|P37833 LOC_Os01g55540 "Aspartate aminotransferase, cytoplasmic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1180 (420.4 bits), Expect = 6.7e-120, P = 6.7e-120
 Identities = 222/396 (56%), Positives = 295/396 (74%)

Query:     8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
             S F G+  AP DPILGV+ A+  D    K+NLGVGAYRTEE +P VL+VV++AE +++  
Sbjct:     5 SVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINN 64

Query:    68 GEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
                 KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++
Sbjct:    65 PSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHY 124

Query:   127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
                 + I  PTWGNH  +F  A +    YRYYDP T GLDF+G++ D+ +AP G+ +LLH
Sbjct:   125 HERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLH 184

Query:   187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
              CAHNPTG+DPT +QWE+I  +++ K  +PFFD AYQGFASGSLD DA SVR+F   G E
Sbjct:   185 ACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGE 244

Query:   247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
             LL+AQSY+KN+GLY ER+GA+++VC S+D+A RV+SQLK + RPMYSNPP+HGA IVA +
Sbjct:   245 LLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVATI 304

Query:   307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
             + + A+F+EW  E++ MA RI ++RQ+LFD+L  ++  G DWS I++QIGMF+FTGLN  
Sbjct:   305 LKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPG-DWSHIIKQIGMFTFTGLNSD 363

Query:   367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
             Q   M  ++H+YMT DGRIS+AGLS     +LADAI
Sbjct:   364 QVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAI 399

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006099 "tricarboxylic acid cycle" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006522 "alanine metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

GO:0006807 "nitrogen compound metabolic process" evidence=ISS

UNIPROTKB|P28734 P28734 "Aspartate aminotransferase, cytoplasmic" [Daucus carota (taxid:4039)]

 Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
 Identities = 226/396 (57%), Positives = 298/396 (75%)

Query:     8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-E 66
             S F  V  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VL+VVKKAE +++ +
Sbjct:     3 SVFANVVRAPEDPILGVTVAYHKDQSPNKLNLGVGAYRTEEGKPLVLNVVKKAEQMLVND 62

Query:    67 RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
             +   KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++
Sbjct:    63 QSRVKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHY 122

Query:   127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
                 V I  PTWGNH  IF  A +    YRYY+P+T GLDFEGM+ D+ +AP G+ +LLH
Sbjct:   123 HEHTVYIPQPTWGNHPKIFTLAGLSVKTYRYYNPETRGLDFEGMLEDLGSAPLGAIVLLH 182

Query:   187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
              CAHNPTG+DPT EQWE+I  +++ K+ +PFFD AYQGFASGSLD DA SVR+F   G E
Sbjct:   183 ACAHNPTGVDPTIEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDADAQSVRIFVADGGE 242

Query:   247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
              L AQSY+KN+GLY ER+GA+++VC ++D+A++V+SQLK + RPMYS+PP+HGA IVA +
Sbjct:   243 CLAAQSYAKNMGLYGERVGALSIVCKTADVASKVESQLKLVIRPMYSSPPLHGASIVAAI 302

Query:   307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
             + +  L++EW  E++ MA RI ++RQ+LF++L AK   G DWS I++QIGMF+FTGLN  
Sbjct:   303 LKDGDLYNEWTLELKAMADRIISMRQELFNALQAKGTPG-DWSHIVKQIGMFTFTGLNSE 361

Query:   367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
             Q   MTN++H+Y+T DGRIS+AGLS     +LADAI
Sbjct:   362 QVTFMTNEYHIYLTSDGRISMAGLSSRTVPHLADAI 397

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

TAIR|locus:2180826 ASP2 "aspartate aminotransferase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 216/396 (54%), Positives = 296/396 (74%)

Query:     8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAEN-LMLE 66
             S F  V  AP DPILGV+ A+  D    K+NLGVGAYRTEE +P VLDVV+KAE  L+ +
Sbjct:     3 SVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVND 62

Query:    67 RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
                 KEY+PI G++ FNK++A+L+ GAD+  + E RV TVQ LSGTGSLR+ A  ++ ++
Sbjct:    63 PSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHY 122

Query:   127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
               + + I  PTWGNH  +FN A +    +RYYDP T GLDF+G++ D+ AAP G+ +LLH
Sbjct:   123 HQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLH 182

Query:   187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
              CAHNPTG+DPT EQWE+I  +++ K+ +PFFD AYQGFASGSLD DA SVR F   G E
Sbjct:   183 ACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDTDAQSVRTFVADGGE 242

Query:   247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
              L+AQSY+KN+GLY ER+GA+++VC S+D+A++V+SQ+K + RPMYS+PP+HGA IVA +
Sbjct:   243 CLIAQSYAKNMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVATI 302

Query:   307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
             + +  +++ W  E++ MA RIK++RQ+LF+++ A+   G DWS I++QIGMF+FTGLNK 
Sbjct:   303 LKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPG-DWSHIIKQIGMFTFTGLNKE 361

Query:   367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
             Q + MT ++H+YMT DGRIS+AGLS     +LADA+
Sbjct:   362 QVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAM 397

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0006807 "nitrogen compound metabolic process" evidence=IMP

TAIR|locus:2144226 ASP3 "aspartate aminotransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1137 (405.3 bits), Expect = 2.4e-115, P = 2.4e-115
 Identities = 216/396 (54%), Positives = 290/396 (73%)

Query:     8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-E 66
             S F  +  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VL+VV+KAE  ++ +
Sbjct:    47 SVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLIND 106

Query:    67 RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
             R   KEYLPI GL  FNK++A+L+ GAD+  ++E R+ TV+ LSGTGSLR+    + +++
Sbjct:   107 RTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHY 166

Query:   127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
                 + I+ PTWGNH  IF  A +    YRYYDP T GL+F+G++ D+ AA  GS +LLH
Sbjct:   167 HQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLH 226

Query:   187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
              CAHNPTG+DPT +QWE+I  +++ K  +PFFD AYQGFASGSLD DA  +R+F   G E
Sbjct:   227 ACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGGE 286

Query:   247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
              LVAQSY+KN+GLY ER+GA+++VC S+D+A RV+SQLK + RPMYS+PP+HGA IVA +
Sbjct:   287 CLVAQSYAKNMGLYGERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAVI 346

Query:   307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
             + +  LF+EW  E++ MA RI ++R++LF++L  +   G DWS I++QIGMF+FTGLN A
Sbjct:   347 LRDKNLFNEWTLELKAMADRIISMRKQLFEALRTRGTPG-DWSHIIKQIGMFTFTGLNPA 405

Query:   367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
             Q   MT ++H+YMT DGRIS+AGLS     +LADAI
Sbjct:   406 QVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAI 441

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0010150 "leaf senescence" evidence=IEP

GO:0005777 "peroxisome" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009735 "response to cytokinin stimulus" evidence=RCA

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0043248 "proteasome assembly" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0009536 "plastid" evidence=IDA

DICTYBASE|DDB_G0282493 aatB "aspartate transaminase" [Dictyostelium discoideum (taxid:44689)]

 Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
 Identities = 221/397 (55%), Positives = 280/397 (70%)

Query:    10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
             F  V + P DPILGVS AFKADTD +K++  VGAYR E  +PYVL  V +AE  +L  G 
Sbjct:    41 FANVPLGPVDPILGVSTAFKADTDPRKVDTSVGAYRDENGKPYVLKCVFEAEKRLL--GA 98

Query:    70 NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP-G 128
              KEYLPI+G+  FNK++A+LL+G D  V KE+R+ TVQ LSGTG+LR+    I +Y P G
Sbjct:    99 PKEYLPIDGIPEFNKLSAKLLYG-DAMVGKEKRMVTVQALSGTGALRIGIIFIRKYLPAG 157

Query:   129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188
               V IS P+W NH NI  ++ V  +EY YYDPKT GLDF GMI D++AAP GS  +LH C
Sbjct:   158 TVVYISRPSWTNHHNICKESGVQSAEYAYYDPKTKGLDFTGMINDMRAAPNGSVFVLHLC 217

Query:   189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248
             AHNPTG+DPT EQW  IADV++EKNHIPF D AYQG+ASG LD DA S RLF  RG E+ 
Sbjct:   218 AHNPTGVDPTHEQWNIIADVMREKNHIPFMDCAYQGYASGDLDYDAYSARLFLNRGFEMF 277

Query:   249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308
              AQSYSKN GLY ER GA+ +V    D+  ++ SQLK   R MYS+PP HGAR+V  V+ 
Sbjct:   278 SAQSYSKNFGLYGERTGALTIVSHREDVIPKMLSQLKMDIRAMYSSPPTHGARLVTTVLS 337

Query:   309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQS 368
             +P L   W  E++ M+GRIK+VRQK+ D+L A+   G +W  I+ QIGMF++TGL K Q 
Sbjct:   338 DPELTALWVKELKEMSGRIKDVRQKVLDALIARKVPG-NWEHIVNQIGMFTYTGLTKPQV 396

Query:   369 DNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS 405
             D + NK+H+Y+   GR+SLAGL+    +Y ADAI+D+
Sbjct:   397 DILVNKYHIYLLGSGRVSLAGLNNKNIDYFADAILDA 433

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0019266 "asparagine biosynthetic process from oxaloacetate" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

GO:0006533 "aspartate catabolic process" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0268664 aatA "aspartate transaminase" [Dictyostelium discoideum (taxid:44689)]

 Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
 Identities = 207/399 (51%), Positives = 278/399 (69%)

Query:     4 AVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENL 63
             + N + +  V   P DPILGVS A+  DT   K+NLGVGAYR E  +PYVLD VKKA+  
Sbjct:    22 STNTNWWANVQKGPEDPILGVSIAYNKDTSPSKINLGVGAYRDENGKPYVLDCVKKADKK 81

Query:    64 MLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 123
             + E   + EY PI G+AAFN++ A+L  G +   +KE+R+ATVQ +SGTG+LR+AA    
Sbjct:    82 IYEANVDHEYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFA 141

Query:   124 RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183
             R+  G    + +PTWGNH  IFNDA +P   Y YY+P T GL+FE M  DI AAP GS I
Sbjct:   142 RFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSII 201

Query:   184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243
             LLH CAHNPTG+DPT EQW+KI+++ +E+ H   FD AYQGFASGS + DA++VR+F   
Sbjct:   202 LLHACAHNPTGVDPTAEQWKKISEICKERGHFVLFDFAYQGFASGSPEKDAAAVRMFVED 261

Query:   244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV 303
             G  + + QS++KN GLY ERIGA +++  +SD A  V+SQLK L RPMYSNPPV+GAR+V
Sbjct:   262 GHNIALCQSFAKNFGLYGERIGAFSILTETSDQALNVESQLKILIRPMYSNPPVYGARLV 321

Query:   304 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL 363
               ++ +  L +EW++E++ MA RI N+R++L   L  K  S +DWS I  QIGMF FTGL
Sbjct:   322 QAILKDKELTNEWRSEVKGMADRIINMREQLVKYLK-KHGSTRDWSHITTQIGMFCFTGL 380

Query:   364 NKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
                Q D + N++H+Y+T++GRIS+AG++    EYLA A+
Sbjct:   381 TPEQVDRLANEYHIYLTRNGRISIAGINSTNVEYLAKAM 419

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IEA;ISS

GO:0019266 "asparagine biosynthetic process from oxaloacetate" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

GO:0006533 "aspartate catabolic process" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0005739 "mitochondrion" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|P12344 GOT2 "Aspartate aminotransferase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 207/391 (52%), Positives = 274/391 (70%)

Query:    13 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE 72
             V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KE
Sbjct:    36 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKE 95

Query:    73 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-V 131
             YLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V
Sbjct:    96 YLPIAGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGASFLQRFFKFSRDV 155

Query:   132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191
              +  PTWGNH  IF DA +    YRYYDPKT G DF G I DI   P  S ILLH CAHN
Sbjct:   156 FLPKPTWGNHTPIFRDAGMQLQSYRYYDPKTCGFDFTGAIEDISKIPAQSVILLHACAHN 215

Query:   192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251
             PTG+DP PEQW+++A V+++ N   FFD+AYQGFASG  + DA +VR F  +G+ + + Q
Sbjct:   216 PTGVDPRPEQWKEMATVVKKNNLFAFFDMAYQGFASGDGNKDAWAVRHFIEQGINVCLCQ 275

Query:   252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311
             SY+KN+GLY ER+GA  VVC  ++ A RV+SQLK L RPMYSNPP++GARI + ++ +P 
Sbjct:   276 SYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPMYSNPPINGARIASTILTSPD 335

Query:   312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNM 371
             L  +W  E++ MA RI ++R +L  +L  K+ S  +W  I+ QIGMF +TGL   Q + +
Sbjct:   336 LRKQWLHEVKGMADRIISMRTQLVSNLK-KEGSSHNWQHIIDQIGMFCYTGLKPEQVERL 394

Query:   372 TNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
             T ++ +YMTKDGRIS+AG++     YLA AI
Sbjct:   395 TKEFSIYMTKDGRISVAGVTSGNVAYLAHAI 425

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0005743 "mitochondrial inner membrane" evidence=ISS

GO:0009986 "cell surface" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0005886 "plasma membrane" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0045471 "response to ethanol" evidence=IEA

GO:0019551 "glutamate catabolic process to 2-oxoglutarate" evidence=IEA

GO:0019550 "glutamate catabolic process to aspartate" evidence=IEA

GO:0015908 "fatty acid transport" evidence=IEA

GO:0006533 "aspartate catabolic process" evidence=IEA

GO:0006532 "aspartate biosynthetic process" evidence=IEA

GO:0006107 "oxaloacetate metabolic process" evidence=IEA

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

MGI|MGI:95792 Got2 "glutamate oxaloacetate transaminase 2, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 209/391 (53%), Positives = 274/391 (70%)

Query:    13 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE 72
             V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KE
Sbjct:    36 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKE 95

Query:    73 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-V 131
             YLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V
Sbjct:    96 YLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDV 155

Query:   132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191
              +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHN
Sbjct:   156 FLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHN 215

Query:   192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251
             PTG+DP PEQW++IA V+++KN   FFD+AYQGFASG  D DA +VR F  +G+ + + Q
Sbjct:   216 PTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQ 275

Query:   252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311
             SY+KN+GLY ER+GA  VVC  ++ A RV+SQLK L RP+YSNPP++GARI A ++ +P 
Sbjct:   276 SYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPD 335

Query:   312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNM 371
             L  +W  E++ MA RI ++R +L  +L  K+ S  +W  I  QIGMF FTGL   Q + +
Sbjct:   336 LRKQWLQEVKGMADRIISMRTQLVSNLK-KEGSSHNWQHITDQIGMFCFTGLKPEQVERL 394

Query:   372 TNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
             T ++ VYMTKDGRIS+AG++     YLA AI
Sbjct:   395 TKEFSVYMTKDGRISVAGVTSGNVGYLAHAI 425

GO:0003824 "catalytic activity" evidence=IEA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISO;IDA

GO:0005543 "phospholipid binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006107 "oxaloacetate metabolic process" evidence=IDA

GO:0006520 "cellular amino acid metabolic process" evidence=ISO

GO:0006531 "aspartate metabolic process" evidence=ISO

GO:0006532 "aspartate biosynthetic process" evidence=IDA

GO:0006533 "aspartate catabolic process" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009986 "cell surface" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0019550 "glutamate catabolic process to aspartate" evidence=IDA

GO:0019551 "glutamate catabolic process to 2-oxoglutarate" evidence=IDA

GO:0019899 "enzyme binding" evidence=ISO

GO:0030170 "pyridoxal phosphate binding" evidence=ISO

GO:0031406 "carboxylic acid binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043204 "perikaryon" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0043648 "dicarboxylic acid metabolic process" evidence=ISO

GO:0045471 "response to ethanol" evidence=ISO

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q02636	ATTY_RHIME	2, ., 6, ., 1, ., 5	0.3589	0.9317	0.9820	yes	no
P12344	AATM_BOVIN	2, ., 6, ., 1, ., 1	0.5294	0.9487	0.9046	yes	no
P05202	AATM_MOUSE	2, ., 6, ., 1, ., 1	0.5345	0.9487	0.9046	yes	no
P95468	TYRB_PARDE	2, ., 6, ., 1, ., 5, 7	0.3943	0.9292	0.9670	yes	no
O94320	AATM_SCHPO	2, ., 6, ., 1, ., 1	0.4641	0.9487	0.8901	yes	no
P46248	AAT5_ARATH	2, ., 6, ., 1, ., 1	0.8926	1.0	0.9050	yes	no
P28011	AAT1_MEDSA	2, ., 6, ., 1, ., 1	0.5555	0.9609	0.9425	N/A	no
Q4R559	AATM_MACFA	2, ., 6, ., 1, ., 1	0.5294	0.9487	0.9046	N/A	no
P44425	AAT_HAEIN	2, ., 6, ., 1, ., 1	0.4492	0.9560	0.9898	yes	no
P72173	AAT_PSEAE	2, ., 6, ., 1, ., 1	0.4307	0.9634	0.9924	yes	no
Q28F67	AATM_XENTR	2, ., 6, ., 1, ., 1	0.5140	0.9487	0.9110	yes	no
Q5REB0	AATM_PONAB	2, ., 6, ., 1, ., 1	0.5268	0.9487	0.9046	yes	no
P28734	AATC_DAUCA	2, ., 6, ., 1, ., 1	0.5707	0.9609	0.9728	N/A	no
P58661	AAT_SALTY	2, ., 6, ., 1, ., 1	0.4492	0.9560	0.9898	yes	no
Q54SF7	AATC_DICDI	2, ., 6, ., 1, ., 1	0.5566	0.9560	0.8949	yes	no
P00508	AATM_CHICK	2, ., 6, ., 1, ., 1	0.5115	0.9487	0.9196	yes	no
P00507	AATM_RAT	2, ., 6, ., 1, ., 1	0.5294	0.9487	0.9046	yes	no
P00506	AATM_PIG	2, ., 6, ., 1, ., 1	0.5242	0.9487	0.9046	yes	no
P00505	AATM_HUMAN	2, ., 6, ., 1, ., 1	0.5294	0.9487	0.9046	yes	no
P08907	AATM_HORSE	2, ., 6, ., 1, ., 1	0.5140	0.9487	0.9700	yes	no
P23542	AATC_YEAST	2, ., 6, ., 1, ., 1	0.4024	0.9585	0.9401	yes	no
P26563	AATM_LUPAN	2, ., 6, ., 1, ., 1	0.8853	1.0	0.9030	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.998
4th Layer	2.6.1.1	0.994

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	410
PLN02397	423	PLN02397, PLN02397, aspartate transaminase	0.0
PTZ00376	404	PTZ00376, PTZ00376, aspartate aminotransferase; Pr	0.0
PRK09257	396	PRK09257, PRK09257, aromatic amino acid aminotrans	0.0
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	0.0
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	1e-104
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	6e-44
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	1e-10
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	3e-07
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	4e-06
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	9e-05

>gnl|CDD|215222 PLN02397, PLN02397, aspartate transaminase

 Score =  798 bits (2064), Expect = 0.0
 Identities = 268/410 (65%), Positives = 323/410 (78%), Gaps = 1/410 (0%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
           M AA   SRFE V  APPDPILGV+EAF AD    KLNLGVGAYRTEE +P VL+VV+KA
Sbjct: 15  MAAAAASSRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKA 74

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           E  +L    NKEYLPIEGLA FNK++A+L +GAD+  +KE RVATVQ LSGTGSLRL A 
Sbjct: 75  EQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAE 134

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
            + R++PG+ + I +PTWGNH NIF DA VP   YRYYDPKT GLDF+G++ D+KAAP G
Sbjct: 135 FLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDG 194

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           SF+LLH CAHNPTG+DPTPEQWE+I+D+I+ KNH+PFFD AYQGFASG LD DA SVR+F
Sbjct: 195 SFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMF 254

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
              G E+LVAQSY+KN+GLY ER+GA++VVC S+D+A RVKSQLK +ARPMYSNPP+HGA
Sbjct: 255 VEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGA 314

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
            IVA ++G+P LF EW  E++ MA RI ++RQKL+D+L A+   G DWS I +QIGMFSF
Sbjct: 315 SIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPG-DWSHITKQIGMFSF 373

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           TGLNK Q D MT ++H+YMT+DGRIS+AGLS     YLADAI     N S
Sbjct: 374 TGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLADAIHAVVTNAS 423

Length = 423

>gnl|CDD|240390 PTZ00376, PTZ00376, aspartate aminotransferase; Provisional

 Score =  616 bits (1590), Expect = 0.0
 Identities = 227/403 (56%), Positives = 299/403 (74%), Gaps = 2/403 (0%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S F  V + PPDPILG++ AFKAD    K+NLG+GAYR E  +PYVL+ V+KAE ++ E+
Sbjct: 3   SLFSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEK 62

Query: 68  GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 127
             +KEYLPIEGL +F +   +LLFG  +  L E+R+ATVQ LSGTG+LRL    ++R+ P
Sbjct: 63  NLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLP 122

Query: 128 GAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
               V +S+PTW NH NIF  A +   EYRYYDPKT GLDF+GM+ D++ AP GS +LLH
Sbjct: 123 AGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLH 182

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DPT EQW++IADV++ KN IPFFD+AYQGFASG LD DA ++RLFA RG+E
Sbjct: 183 ACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE 242

Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
            LVAQS+SKN+GLY ERIGA+++VC++ + AA V SQLK + RPMYS+PP+HGARI   +
Sbjct: 243 FLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRI 302

Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + +P L  EW +E++ M+GRI+N+RQ L+D L A    G DW  I+ QIGMFSFTGL K 
Sbjct: 303 LSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPG-DWEHIINQIGMFSFTGLTKE 361

Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNV 409
           Q + +  K+H+Y+  +GRIS+AGL+    +Y+A+AI D   NV
Sbjct: 362 QVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDVVRNV 404

Length = 404

>gnl|CDD|181731 PRK09257, PRK09257, aromatic amino acid aminotransferase; Provisional

 Score =  554 bits (1431), Expect = 0.0
 Identities = 205/395 (51%), Positives = 267/395 (67%), Gaps = 2/395 (0%)

Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +  AP DPILG+ EAF+AD    K+NLGVG Y+ E+ +  VL  VKKAE  +LE   
Sbjct: 2   FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETET 61

Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YLPIEGLAA+ +   ELLFGAD+  L   RVATVQ   GTG+LR+ A  ++R FP A
Sbjct: 62  TKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDA 121

Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           KV +S PTW NH+ IF  A +    Y YYD  T GLDF+ M+AD+  AP G  +LLHGC 
Sbjct: 122 KVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCC 181

Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTG D TPEQW+++A++++E+  IPF D+AYQGF  G L+ DA  +R FA  G+ELLV
Sbjct: 182 HNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDG-LEEDAYGLRAFAAAGLELLV 240

Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A S+SKN GLY ER+GA++VV   ++ A RV SQLK   R  YSNPP HGA IVA ++ +
Sbjct: 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILND 300

Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
           P L  EW+AE+E M  RIK +RQ L ++L AK    +D+ FI RQ GMFS++GL   Q D
Sbjct: 301 PELRAEWEAELEEMRERIKAMRQLLVEALKAKG-PSRDFDFIARQRGMFSYSGLTPEQVD 359

Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
            +  ++ VY    GRI++AGL+ +  +Y+A+AI  
Sbjct: 360 RLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAA 394

Length = 396

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  548 bits (1413), Expect = 0.0
 Identities = 212/398 (53%), Positives = 277/398 (69%), Gaps = 2/398 (0%)

Query: 9   RFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG 68
            FE +  AP DPILG+ EAFKAD    K+NLG+G Y+ E+ +  VL  VKKAE  +LE+ 
Sbjct: 1   MFEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQE 60

Query: 69  ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128
           + K YLPIEGL  F +   +LLFGAD+  L E RVATVQ L GTG+LR+AA  + R+FP 
Sbjct: 61  KTKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPD 120

Query: 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188
           A V IS PTW NHK IF  A +    Y YYD +T GLDF+GM+AD+K AP GS +LLHGC
Sbjct: 121 ATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGC 180

Query: 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248
            HNPTGIDPT EQW+++AD+I+E+  IPFFD+AYQGFA G L+ DA ++RLFA  G ELL
Sbjct: 181 CHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELL 239

Query: 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308
           VA S+SKN GLY ER+GA++VV   ++ A RV SQLK + R  YSNPP HGA +VA ++ 
Sbjct: 240 VASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILN 299

Query: 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQS 368
           NP L  EW+ E+E M  RI  +RQ L D+L A   + +++ FI+ Q GMFS+TGL+  Q 
Sbjct: 300 NPELRAEWEQELEEMRQRILEMRQALVDALKAL-GAPRNFDFIISQRGMFSYTGLSPEQV 358

Query: 369 DNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 406
           D +  ++ +Y+   GRI++AGL+ +  +Y+A AI    
Sbjct: 359 DRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAVL 396

Length = 396

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  312 bits (802), Expect = e-104
 Identities = 123/381 (32%), Positives = 168/381 (44%), Gaps = 36/381 (9%)

Query: 34  EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA 93
             K+NLG   Y  +      L  V KAE   L  G    Y P +GL    +  A+ L   
Sbjct: 1   TDKINLGSNEYLGDS---GTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLG-- 55

Query: 94  DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS 153
            + VLK  R A V   SG G+   A   + R  PG  +L+ +PT+ ++  IF  A     
Sbjct: 56  RSPVLKLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVV 115

Query: 154 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 213
            Y  Y      LDF+ + A +K A  G+ ++LH   HNPTG   T E+ EK+ D+ +E N
Sbjct: 116 RYPLYSSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHN 175

Query: 214 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273
            +   D AY GF  G    DA + R     G  LLV  S+SK  GL   R+G +      
Sbjct: 176 ILLLVDEAYAGFVFG--SLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNA-- 231

Query: 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK 333
                 V SQL++LARP YS    H     A  + +P L       +E M  RIK  R  
Sbjct: 232 -----AVISQLRKLARPFYS--STHLQAAAAAALSDPLLVASE---LEEMRQRIKERRDY 281

Query: 334 LFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTK-------- 381
           L D L A        S +  Q G F  TGL+     A +  +  +  VY+T         
Sbjct: 282 LRDGLEA-----AGLSVLPSQAGFFLLTGLDPEAALALAQVLLEEVGVYVTPGSSFGGPG 336

Query: 382 DGRISLAGLSLAKCEYLADAI 402
             RI++AG +  + E L +AI
Sbjct: 337 WLRITVAGGTEEELEELLEAI 357

Length = 357

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  155 bits (395), Expect = 6e-44
 Identities = 69/381 (18%), Positives = 128/381 (33%), Gaps = 48/381 (12%)

Query: 37  LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 96
           ++L +G          +  +   A      R     Y P  GL    +  AE L      
Sbjct: 1   IDLSIGEPDFPPPPEVLEALAAAAL-----RAGLLGYYPDPGLPELREAIAEWLGRRGGV 55

Query: 97  VLKEQRVATVQGLSGTGSLRLAA-ALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEY 155
            +  + +  V       +L L   AL+    PG +VL+  PT+  ++     A       
Sbjct: 56  DVPPEEI--VVTNGAQEALSLLLRALLN---PGDEVLVPDPTYPGYEAAARLAGAEVVPV 110

Query: 156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHI 215
              +     LD E  + +    P    + L+   +NPTG   + E+ E++A++ ++   +
Sbjct: 111 PLDEEGGFLLDLE--LLEAAKTPKTKLLYLNNP-NNPTGAVLSEEELEELAELAKKHGIL 167

Query: 216 PFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 275
              D AY        D +             ++V +S+SK  GL   RIG +  +     
Sbjct: 168 IISDEAYAELVY---DGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYL--IAP--- 219

Query: 276 LAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335
               +  +LK+L     S P        A      A  D+ +  +E +  R +  R  L 
Sbjct: 220 -PEELLERLKKLLPYTTSGPSTLSQAAAA------AALDDGEEHLEELRERYRRRRDALL 272

Query: 336 DSLSAKDKSGKDWSFILRQIGMFSFTGLNK----AQSDNMTNKWHVYMTKDG-------- 383
           ++L            +    G F +  L +       + +  +  V +            
Sbjct: 273 EALKELG----PLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEG 328

Query: 384 --RISLAGLSLAKCEYLADAI 402
             R+S A     + E   + +
Sbjct: 329 FVRLSFAT-PEEELEEALERL 348

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score = 62.3 bits (152), Expect = 1e-10
 Identities = 69/331 (20%), Positives = 123/331 (37%), Gaps = 51/331 (15%)

Query: 26  EAFKADTDEKKLNLGVGAYRTEELQP------YVLDVVKKAENLMLERGENKEYLPIEGL 79
            A +    E  ++L +G       +P      ++++   +A    LE G    Y P  G+
Sbjct: 20  AAAELKGKEDVIDLSIG-------EPDFPTPEHIIEAAIEA----LEEGGTH-YTPSAGI 67

Query: 80  AAFNKVTAELL---FGADNSVLKEQRVATVQGLSGTGSLRLAA-ALIERYFPGAKVLISS 135
               +  AE     +G D  V  E+ +    G     +L LA  AL+    PG +VLI  
Sbjct: 68  PELREAIAEKYKRRYGLD--VDPEEEIIVTAG--AKEALFLAFLALLN---PGDEVLIPD 120

Query: 136 PTWGNHKNIFN--DARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHN 191
           P + +++        +                 F+  + D++AA  P    I+L    +N
Sbjct: 121 PGYPSYEAAVKLAGGKP-----VPVPLDEEENGFKPDLEDLEAAITPKTKAIIL-NSPNN 174

Query: 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251
           PTG   + E+ + I ++ +E + I   D  Y+         +  S+   A      +   
Sbjct: 175 PTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYD--GAEHPSILELAGARDRTITIN 232

Query: 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311
           S+SK  G+   RIG +  V    +L A     L++L   + S  P          +  P 
Sbjct: 233 SFSKTYGMTGWRIGWV--VGPPEELIAA----LRKLKSYLTSCAPTPAQYAAIAALNGPQ 286

Query: 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342
             +     +E M    +  R  L ++L+   
Sbjct: 287 SDE----VVEEMREEYRERRDLLVEALNEIG 313

Length = 393

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 37/229 (16%)

Query: 118 AAALIERYF-----PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 172
           +  LIE        PG  VLI  PT+  ++     A     +      K   LD + ++A
Sbjct: 84  SDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPL---KEFRLDLDAILA 140

Query: 173 DIKAAPGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231
            I+      F+    C  +NPTG     E+   + + +  +  +   D AY  F+     
Sbjct: 141 AIRDKTKLVFL----CNPNNPTGTLLPREELRALLEAL-PEGGLVVIDEAYIEFS----- 190

Query: 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPM 291
              SS+ L       L+V +++SK  GL   R+G      ++ +L A +        RP 
Sbjct: 191 -PESSLELLKYPP-NLIVLRTFSKAFGLAGLRVG---YAIANPELIAAL-----NKVRPP 240

Query: 292 YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340
           ++          A      AL D     +E    RI+  R++L+ +L A
Sbjct: 241 FNVS------SPALAAAIAALRDA--DYLEESVERIREERERLYAALKA 281

Length = 356

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 48.4 bits (116), Expect = 4e-06
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD--PKTVGLDFEGMIADIKAA-PGGSFI 183
            G  VL+    WGN+K  FN  R   +E   Y    +  G D + +   ++AA   G  I
Sbjct: 92  QGDTVLLPDHNWGNYKLTFNTRRG--AEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVI 149

Query: 184 LLHGCAHNPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGF 225
           ++    +NPTG  PT ++   I + I+E        +   D AY G 
Sbjct: 150 VILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGL 196

Length = 388

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 44.0 bits (104), Expect = 9e-05
 Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 15/171 (8%)

Query: 111 GTGSLR-LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169
           G G+L  LA A+++   PG  VL+  P +  +      AR    E R Y P +   DFE 
Sbjct: 91  GDGALDYLARAMLD---PGDTVLVPDPGFAYYGM---SARYHHGEVREY-PVSKADDFEQ 143

Query: 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 229
               +  A  G  I+     HNPTG +   ++ E +A+   E+  +   D AY  FA   
Sbjct: 144 TADTVLDAYDGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLV-VVDEAYGEFA--- 199

Query: 230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 280
                S+V L   R  ++ V +++SK  GL   R+G   V    +D  ARV
Sbjct: 200 --ERPSAVALVEERD-DVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARV 247

Length = 357

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	410
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	100.0
PLN02397	423	aspartate transaminase	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PLN02187	462	rooty/superroot1	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PLN02656	409	tyrosine transaminase	100.0
PRK06855	433	aminotransferase; Validated	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK09148	405	aminotransferase; Validated	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PLN02231	534	alanine transaminase	100.0
PRK07337	388	aminotransferase; Validated	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK07324	373	transaminase; Validated	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK07777	387	aminotransferase; Validated	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK08175	395	aminotransferase; Validated	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PLN02368	407	alanine transaminase	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	100.0
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.96
PLN02483	489	serine palmitoyltransferase	99.96
PRK10534	333	L-threonine aldolase; Provisional	99.96
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.96
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.96
PLN02822	481	serine palmitoyltransferase	99.96
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.96
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.95
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.95
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.95
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.95
PRK02627	396	acetylornithine aminotransferase; Provisional	99.95
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.95
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.95
PLN02721	353	threonine aldolase	99.95
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.95
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.94
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.94
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.94
PRK13392	410	5-aminolevulinate synthase; Provisional	99.94
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.94
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.94
PRK02948	381	cysteine desulfurase; Provisional	99.94
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.94
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.94
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.94
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.94
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.93
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.93
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.93
PRK07179	407	hypothetical protein; Provisional	99.93
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.93
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.93
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.93
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.93
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.93
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.93
PRK09064	407	5-aminolevulinate synthase; Validated	99.93
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.93
PLN02409	401	serine--glyoxylate aminotransaminase	99.92
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.92
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.92
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.92
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.92
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.92
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.92
PRK07049	427	methionine gamma-lyase; Validated	99.91
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.91
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.91
PRK04260	375	acetylornithine aminotransferase; Provisional	99.91
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.91
PLN02242	418	methionine gamma-lyase	99.91
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.91
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.91
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.91
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.91
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.91
PRK13393	406	5-aminolevulinate synthase; Provisional	99.9
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.9
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.9
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.9
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.9
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.89
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.89
PRK06234	400	methionine gamma-lyase; Provisional	99.89
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.89
PLN00144	382	acetylornithine transaminase	99.89
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.89
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.89
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.88
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.88
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.88
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.88
PRK14012	404	cysteine desulfurase; Provisional	99.88
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.87
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.87
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.87
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.87
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.87
PLN02624	474	ornithine-delta-aminotransferase	99.87
PLN02955	476	8-amino-7-oxononanoate synthase	99.87
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.87
PRK06767	386	methionine gamma-lyase; Provisional	99.87
PRK07582	366	cystathionine gamma-lyase; Validated	99.86
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.86
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.86
PRK06460	376	hypothetical protein; Provisional	99.86
PRK08249	398	cystathionine gamma-synthase; Provisional	99.86
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.86
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.86
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.86
PRK08045	386	cystathionine gamma-synthase; Provisional	99.86
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.86
PRK08776	405	cystathionine gamma-synthase; Provisional	99.86
PRK07505	402	hypothetical protein; Provisional	99.86
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.85
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.85
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.85
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.85
PRK07811	388	cystathionine gamma-synthase; Provisional	99.85
PLN02651	364	cysteine desulfurase	99.85
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.85
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.84
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.84
PRK07503	403	methionine gamma-lyase; Provisional	99.83
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.83
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.83
PRK08574	385	cystathionine gamma-synthase; Provisional	99.83
PRK07050	394	cystathionine beta-lyase; Provisional	99.83
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.83
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.83
PRK08861	388	cystathionine gamma-synthase; Provisional	99.83
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.83
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.82
PRK09028	394	cystathionine beta-lyase; Provisional	99.82
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.82
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.82
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.81
PRK08064	390	cystathionine beta-lyase; Provisional	99.81
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.8
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.8
PRK05939	397	hypothetical protein; Provisional	99.8
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.8
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.8
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.8
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.8
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.8
PRK05968	389	hypothetical protein; Provisional	99.8
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.8
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.8
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.8
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.79
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.79
PLN02509	464	cystathionine beta-lyase	99.79
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.79
PRK07671	377	cystathionine beta-lyase; Provisional	99.79
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.79
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.78
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.78
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.78
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.78
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.78
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.78
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.78
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.78
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.78
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.78
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.77
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.77
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.77
PRK05967	395	cystathionine beta-lyase; Provisional	99.77
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.77
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.77
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.76
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.76
PRK06541	460	hypothetical protein; Provisional	99.75
PRK02769	380	histidine decarboxylase; Provisional	99.75
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.75
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.75
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.74
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.74
PRK06062	451	hypothetical protein; Provisional	99.73
PRK13237	460	tyrosine phenol-lyase; Provisional	99.73
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.73
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.73
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.72
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.72
PRK07482	461	hypothetical protein; Provisional	99.72
PRK05965	459	hypothetical protein; Provisional	99.71
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.71
PRK07678	451	aminotransferase; Validated	99.71
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.71
PRK07046	453	aminotransferase; Validated	99.71
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.7
PRK07481	449	hypothetical protein; Provisional	99.7
PLN02271	586	serine hydroxymethyltransferase	99.7
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.7
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.7
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.7
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.7
PRK07036	466	hypothetical protein; Provisional	99.69
PLN03032	374	serine decarboxylase; Provisional	99.69
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.69
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.69
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.69
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.69
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.69
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.68
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.68
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.68
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.68
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.68
PRK12403	460	putative aminotransferase; Provisional	99.68
PRK06105	460	aminotransferase; Provisional	99.68
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.67
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.67
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.67
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.67
PRK06148	1013	hypothetical protein; Provisional	99.67
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.66
PRK06149	972	hypothetical protein; Provisional	99.66
PRK06917	447	hypothetical protein; Provisional	99.66
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.66
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.66
PRK03080	378	phosphoserine aminotransferase; Provisional	99.66
PRK08114	395	cystathionine beta-lyase; Provisional	99.66
PRK07480	456	putative aminotransferase; Validated	99.66
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.66
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.65
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.65
PRK07483	443	hypothetical protein; Provisional	99.65
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.65
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.64
PLN02724	805	Molybdenum cofactor sulfurase	99.64
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.64
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.63
PRK04311	464	selenocysteine synthase; Provisional	99.61
PRK08297	443	L-lysine aminotransferase; Provisional	99.61
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.61
PRK06434	384	cystathionine gamma-lyase; Validated	99.6
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.6
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.59
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.59
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.59
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.59
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.58
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.57
PLN02263	470	serine decarboxylase	99.57
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.57
PRK15029	755	arginine decarboxylase; Provisional	99.55
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.55
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.53
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.53
PLN02590	539	probable tyrosine decarboxylase	99.52
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.52
PLN02880	490	tyrosine decarboxylase	99.51
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.49
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.47
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.46
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.46
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.41
PRK15400	714	lysine decarboxylase CadA; Provisional	99.41
PRK13578	720	ornithine decarboxylase; Provisional	99.38
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.38
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.37
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.36
PRK12566	954	glycine dehydrogenase; Provisional	99.36
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.35
PRK05367	954	glycine dehydrogenase; Provisional	99.35
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	99.33
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.31
PLN02452	365	phosphoserine transaminase	99.3
PRK12462	364	phosphoserine aminotransferase; Provisional	99.27
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.24
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.23
PRK05367	954	glycine dehydrogenase; Provisional	99.18
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.14
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	99.14
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.14
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.08
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.04
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	99.02
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	98.89
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.88
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	98.83
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.78
COG3844	407	Kynureninase [Amino acid transport and metabolism]	98.7
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.65
COG4100	416	Cystathionine beta-lyase family protein involved i	98.65
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.64
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.58
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.57
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	98.39
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.38
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.05
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	97.97
PRK12566	954	glycine dehydrogenase; Provisional	97.97
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	97.75
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	96.76
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	96.15
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	95.91
PLN02672	1082	methionine S-methyltransferase	95.54
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	94.49
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	91.01
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	85.15
COG0296	628	GlgB 1,4-alpha-glucan branching enzyme [Carbohydra	81.06

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2e-61  Score=427.93  Aligned_cols=395  Identities=53%  Similarity=0.915  Sum_probs=375.7

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      |+.+.+.|+|||+.+..+|++++.+.+|||++|.|.|+.|.+++.+.|++|.+..........|.|..|.++++++++++
T Consensus         2 F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~l   81 (396)
T COG1448           2 FEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKL   81 (396)
T ss_pred             ccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999999999998887766668899999999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      +.+....-+..+++..++|.|||||+.+++.++..+.+..+|++++|+|++|..+++..|.++..+|+.+.++..+|++.
T Consensus        82 lFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~  161 (396)
T COG1448          82 LFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDG  161 (396)
T ss_pred             hcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHH
Confidence            98876666778899999999999999999999999889899999999999999999999999999999998888999999


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +.+.+++.+.+.++++++++|||||..++.++|++|+++.++.+++.+.|-||++|+.+ .+.|.+.++.++......++
T Consensus       162 mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lv  240 (396)
T COG1448         162 MLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLV  240 (396)
T ss_pred             HHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEE
Confidence            99999998889999999999999999999999999999999999999999999999988 88999999999888888999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ..|+||.||+.|.|+|++.+++.+.+.+.++..++....+.+|++||.+++.+.+.+|++++++.+|++++..+++++.+
T Consensus       241 a~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~  320 (396)
T COG1448         241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILE  320 (396)
T ss_pred             EehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l  406 (410)
                      .|+.+.+.|+ +.+-+.+++++..+.|+|.+.|++++++.+|.+++||+++.+||||++++++.+++.++++|.+++
T Consensus       321 mR~~lv~~L~-~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~ai~~v~  396 (396)
T COG1448         321 MRQALVDALK-ALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAVL  396 (396)
T ss_pred             HHHHHHHHHH-hhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHHHHhhC
Confidence            9999999999 877666789999999999999999999999999999999999999999999999999999998874

>PLN02397 aspartate transaminase

Probab=100.00  E-value=1.6e-56  Score=430.48  Aligned_cols=408  Identities=65%  Similarity=1.083  Sum_probs=332.1

Q ss_pred             CccceecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccH
Q 015283            1 MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLA   80 (410)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~   80 (410)
                      |+++.-.|.|+++...+++++..+.+.++.+..+..++|+.|.+.+..++|.+.+.+.++....+..+...+|++..|.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~   94 (423)
T PLN02397         15 MAAAAASSRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLA   94 (423)
T ss_pred             hhhhhhhhHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCH
Confidence            56666677799999999999999888888777778899999975466666655677888766554334435799999999


Q ss_pred             HHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC
Q 015283           81 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP  160 (410)
Q Consensus        81 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~  160 (410)
                      +||+++++++.+......++++|...++.+|+++..++..++..+.|||+|++++|+|+.|...++..|++++.+++.++
T Consensus        95 ~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~  174 (423)
T PLN02397         95 EFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDP  174 (423)
T ss_pred             HHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccC
Confidence            99999999987665444444556555567777776665556666679999999999999999999999999999998545


Q ss_pred             CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          161 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       161 ~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                      +++++|++.+++.+.+..++++++++++||||||.+++.+++++|+++|++||++||+||+|.+|.+++...+..++..+
T Consensus       175 ~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~  254 (423)
T PLN02397        175 KTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMF  254 (423)
T ss_pred             cCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHH
Confidence            56889999998888653356788899999999999999999999999999999999999999999874211122333333


Q ss_pred             hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM  320 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  320 (410)
                      ....+++|+++||||.|+++|||+||++++..+++.++++...+....+..+.+++.++|.++..+|+++++.+.|.+++
T Consensus       255 ~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~  334 (423)
T PLN02397        255 VEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKEL  334 (423)
T ss_pred             HhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            33445799999999999999999999864455677767777666666655566778889988899999887777787788


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHH
Q 015283          321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLAD  400 (410)
Q Consensus       321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~  400 (410)
                      ++.++.++++++.+.+.|+ +++....+.+..|++|+|+|++++.+++.+|++++||.+.++|||++++++.++++++++
T Consensus       335 ~~~~~~~~~rr~~l~~~L~-~~~~~~~~~~~~p~gg~fl~~~l~~~~~~~Ll~~~~V~v~~~~Ri~~~~~~~~~i~~~~~  413 (423)
T PLN02397        335 KGMADRIISMRQKLYDALE-ARGSPGDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLAD  413 (423)
T ss_pred             HHHHHHHHHHHHHHHHHHH-hcCCCCCCCcccCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEeeCCHHHHHHHHH
Confidence            8999999999999999999 876322356678999999999998889999999999999999999998789999999999


Q ss_pred             HHHHHhhhc
Q 015283          401 AIIDSYHNV  409 (410)
Q Consensus       401 ~l~~~l~~~  409 (410)
                      +|++++.+.
T Consensus       414 ~i~~~~~~~  422 (423)
T PLN02397        414 AIHAVVTNA  422 (423)
T ss_pred             HHHHHHhcc
Confidence            999998753

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1e-55  Score=423.99  Aligned_cols=398  Identities=56%  Similarity=0.985  Sum_probs=321.8

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      ++++...+++++..+.+.++++.+++++||+.|.|.+..+.....+.+.+++.+.........|++..|.+++|+++++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~   84 (404)
T PTZ00376          5 FSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKL   84 (404)
T ss_pred             hhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Confidence            77888888888888777777665578899999997333333333456666655544323347899999999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE  168 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  168 (410)
                      +.+..+..+++++|++.+|.|+++++.++..++. .+.+||+|++++|+|+.|...++..|++++.+++.+++++++|++
T Consensus        85 ~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~  164 (404)
T PTZ00376         85 LFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFD  164 (404)
T ss_pred             hcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHH
Confidence            8776666677889885458999999998865543 356999999999999999999999999999999855566899999


Q ss_pred             hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283          169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL  248 (410)
Q Consensus       169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i  248 (410)
                      .+++.+.+..++++++++++||||||.++|.+++++|+++|++|+++||+||+|.+|.+++.+.+..++..+....++++
T Consensus       165 ~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi  244 (404)
T PTZ00376        165 GMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFL  244 (404)
T ss_pred             HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEE
Confidence            99999875334567888899999999999999999999999999999999999999987421112223333333445899


Q ss_pred             EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +++||||.|+++|+|+||++++..++++++++...+.......+.+++.++|.++..+|+++++.+.|.+++++.+++++
T Consensus       245 ~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~  324 (404)
T PTZ00376        245 VAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQ  324 (404)
T ss_pred             EEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999985546688877777766665555556667788999999999987776677777888899999


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHhhh
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++++.+.+.|+ +.+....+.+..+++|+|+|++++.+++++|++++||.+.|+|||++++++.++++.++++|++++..
T Consensus       325 ~~r~~l~~~L~-~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~~~l~~~~~~  403 (404)
T PTZ00376        325 NMRQLLYDELK-ALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDVVRN  403 (404)
T ss_pred             HHHHHHHHHHH-hcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCCeEEEeccCHHhHHHHHHHHHHHHhc
Confidence            99999999998 77643224556789999999999999999999988999999999999877999999999999998764

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=3.3e-55  Score=419.84  Aligned_cols=393  Identities=51%  Similarity=0.875  Sum_probs=321.0

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      |+++...+++++..+...++.+..+++|||+.|.|.+....++..+.+.+++.+.........|.+..|.+++|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~   81 (396)
T PRK09257          2 FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL   81 (396)
T ss_pred             cccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence            67788888888888777777665578999999987433333322478888888876543335799999999999999999


Q ss_pred             hcCCCCCcccCCce--EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283           90 LFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF  167 (410)
Q Consensus        90 ~~~~~~~~~~~~~i--~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  167 (410)
                      +.+..+..+++++|  ++  |+|+++++.++..++..+.|||+|++++|+|+.|...++..|++++.+++.+++++++|+
T Consensus        82 ~~~~~~~~~~~~~i~v~i--T~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~  159 (396)
T PRK09257         82 LFGADSPALAAGRVATVQ--TPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDF  159 (396)
T ss_pred             hcCCCCcccccCeEEEEe--cCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCH
Confidence            87766555678887  66  999999999986555556799999999999999999999999999999985455688999


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +.+++.+.+.+++++++++++||||||.++|.+++++|+++|++|+++||+||+|.++.++ .+.+..++..+....+++
T Consensus       160 ~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~~~~~~~~~~~~~~v  238 (396)
T PRK09257        160 DAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDG-LEEDAYGLRAFAAAGLEL  238 (396)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccc-hHHHHHHHHHHHhcCCcE
Confidence            9999988754445788888999999999999999999999999999999999999998853 112233443433445689


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      ++++||||.|+++|+|+||++++..+++.+.++...+....+..+.+++.+.|.++..+|.++++.+.|.+++++.++.+
T Consensus       239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~  318 (396)
T PRK09257        239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERI  318 (396)
T ss_pred             EEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998543456565566666565554455667788889999999998877677888899999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l  406 (410)
                      +++++.+.+.|+ +.+.+..+.+..+++|+|+|++++.+++.++++++||.+.|.|||++++++++++++++++|++++
T Consensus       319 ~~rr~~l~~~L~-~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~~~i~~~~  396 (396)
T PRK09257        319 KAMRQLLVEALK-AKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAVL  396 (396)
T ss_pred             HHHHHHHHHHHH-hcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHHHHHHhhC
Confidence            999999999998 775321256778999999999998888899989899999999999998789999999999999864

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=100.00  E-value=3e-55  Score=380.13  Aligned_cols=402  Identities=60%  Similarity=1.016  Sum_probs=382.7

Q ss_pred             ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283            6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV   85 (410)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a   85 (410)
                      -.|||++|.+.|||||+.++.+|+.|+++..|||+.|.|.|.+|.|++.+.|++|..+......+-.|.|..|.+++.+.
T Consensus        24 ~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~  103 (427)
T KOG1411|consen   24 ASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKL  103 (427)
T ss_pred             ccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHH
Confidence            34789999999999999999999999999999999999999999999999999999887766666789999999999999


Q ss_pred             HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      .+++..+.....+..++|..+++.+||+|+.+.+.++..+.++..|.+|.|+|+++...+..+|..+..+.+.+..+.++
T Consensus       104 sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gl  183 (427)
T KOG1411|consen  104 SAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGL  183 (427)
T ss_pred             HHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecccccccc
Confidence            99999998888888889999999999999999999999999999999999999999999999999999999988888999


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      |++.+.+.+.+.++...++++.+.|||||+..+.+.|++|.++.++.+.+-+.|.+|++|..++.+.|...++.+...+.
T Consensus       184 d~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~  263 (427)
T KOG1411|consen  184 DFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH  263 (427)
T ss_pred             chHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC
Confidence            99999999999888889999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      .++++.|++|.+|+.|.|+|.+.++|.+.+...++..+++.+.+.++++||.++++++..+|+|.++...|..+++.+.+
T Consensus       264 ~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~Mad  343 (427)
T KOG1411|consen  264 EILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMAD  343 (427)
T ss_pred             ceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHH
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~  405 (410)
                      ++...|+.|.+.|+ +.|...+|+.+..+-|+|.|.++++++++.+.+++.|+++..||||+++++..++..+.++|-++
T Consensus       344 Ri~~mR~~L~d~L~-~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~v  422 (427)
T KOG1411|consen  344 RIISMRQQLFDALE-KEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAV  422 (427)
T ss_pred             hhhhhHHHHhHHhh-cCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhH
Confidence            99999999999999 88887788889999999999999999999999999999999999999999999999999999887


Q ss_pred             hhh
Q 015283          406 YHN  408 (410)
Q Consensus       406 l~~  408 (410)
                      .+.
T Consensus       423 tk~  425 (427)
T KOG1411|consen  423 TKN  425 (427)
T ss_pred             hcC
Confidence            654

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-53  Score=402.40  Aligned_cols=353  Identities=19%  Similarity=0.227  Sum_probs=293.0

Q ss_pred             HhhhcCC-CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCc-eE
Q 015283           27 AFKADTD-EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VA  104 (410)
Q Consensus        27 ~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~-i~  104 (410)
                      ++.+... .++|+|++|+|    ..+. |+.+.+++.+++..+.. +|++..|.++||++|++++.+.++..+++++ |+
T Consensus        20 ~~~~~~~~~~vi~l~iG~P----d~~~-p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eii   93 (393)
T COG0436          20 AAAELKGKEDVIDLSIGEP----DFPT-PEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEII   93 (393)
T ss_pred             HHHHhcCCCCEEEeCCCCC----CCCC-CHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEE
Confidence            4444433 47999999998    4443 78899998888766432 7889999999999999999999998888877 99


Q ss_pred             EEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcccChhhHHHHHhcCCCCcEE
Q 015283          105 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       105 ~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      +  |+|+++++..+  +...+.|||+|++++|+|+.|...+..+|++++.+++..+ ++|.+|++.+++.+++   ++++
T Consensus        94 v--t~Ga~~al~~~--~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~---ktk~  166 (393)
T COG0436          94 V--TAGAKEALFLA--FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP---KTKA  166 (393)
T ss_pred             E--eCCHHHHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc---cceE
Confidence            9  99999999998  4555889999999999999999999999999999997544 5899999999999986   8889


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER  263 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  263 (410)
                      +++++||||||.+++++++++|+++|++||++||.||+|.++.+++.  .+.++..+....+++|+++||||.++++|||
T Consensus       167 i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwR  244 (393)
T COG0436         167 IILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAGARDRTITINSFSKTYGMTGWR  244 (393)
T ss_pred             EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCCCcceEEEEecccccccccccc
Confidence            99999999999999999999999999999999999999999998642  2223333333346899999999999999999


Q ss_pred             cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          264 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       264 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      +||+++  .++++++.+.    +.+.....+++..+|.++..+|+....    .+.+++.++.++++|+.+.+.|. +++
T Consensus       245 vG~~v~--~~~~l~~~~~----~~~~~~~~~~~~~~Q~aa~~aL~~~~~----~~~~~~~~~~~~~rrd~l~~~l~-~~~  313 (393)
T COG0436         245 IGWVVG--PPEELIAALR----KLKSYLTSCAPTPAQYAAIAALNGPQS----DEVVEEMREEYRERRDLLVEALN-EIG  313 (393)
T ss_pred             eeEeec--ChHHHHHHHH----HHHHhcccCCCHHHHHHHHHHhcCccc----hHHHHHHHHHHHHHHHHHHHHHH-hcC
Confidence            999844  3366544443    444445668999999999999987632    12346777999999999999999 776


Q ss_pred             CCCCccccc-CCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------C----eEEecCCCcccHHHHHHHHHHHh
Q 015283          344 SGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       344 ~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------g----Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      .   +++.. |.+++|+|+++     +.+++.+|++++||.+.||       |    |||++. +.+++++++++|++.+
T Consensus       314 g---~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~  389 (393)
T COG0436         314 G---LSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFL  389 (393)
T ss_pred             C---eeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHH
Confidence            2   56666 88999999865     3578999999999999997       2    999988 6799999999999988


Q ss_pred             hhc
Q 015283          407 HNV  409 (410)
Q Consensus       407 ~~~  409 (410)
                      ...
T Consensus       390 ~~~  392 (393)
T COG0436         390 AEY  392 (393)
T ss_pred             Hhc
Confidence            754

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=100.00  E-value=1.9e-51  Score=351.66  Aligned_cols=403  Identities=47%  Similarity=0.833  Sum_probs=379.1

Q ss_pred             ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCCcccHHHHH
Q 015283            6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNK   84 (410)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~   84 (410)
                      .||+|.++...+|+.++.+.+.|.++.+|..+||+.|.|++..|.|++.|.|+++..+..+. .+.+.|.|..|.+.+++
T Consensus         2 ~~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~   81 (410)
T KOG1412|consen    2 SMSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTK   81 (410)
T ss_pred             CcchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhh
Confidence            48999999999999999999999999999999999999999999999999999987776544 45677999999999999


Q ss_pred             HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCC-CCccceeeecCCCc
Q 015283           85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR-VPWSEYRYYDPKTV  163 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g-~~~~~v~~~~~~~~  163 (410)
                      +.++.+.+.....+.++++.-+++.+||||+.+.+.++..+.+...|.+++|+|.++..+++..| ..+..+++.+.++.
T Consensus        82 ~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k  161 (410)
T KOG1412|consen   82 AATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENK  161 (410)
T ss_pred             hhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCc
Confidence            99999988888888889998899999999999999999988888899999999999999999999 46888898888888


Q ss_pred             ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283          164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR  243 (410)
Q Consensus       164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~  243 (410)
                      .+|++.+...++..++..+++++.+.+||||..++.++|+.|++..++++++.+.|-+|++|..++.+.|.|.++.+.+.
T Consensus       162 ~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~  241 (410)
T KOG1412|consen  162 CVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ  241 (410)
T ss_pred             eecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc
Confidence            99999999999988888888887778999999999999999999999999999999999999999999999999999998


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      +...+++.||+|.||+.|.|+|-+.++.+++..+..+..++...++..+++||+.++++....|+.+++.++|...++.+
T Consensus       242 g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~M  321 (410)
T KOG1412|consen  242 GFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTM  321 (410)
T ss_pred             CCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHH
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHH
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII  403 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~  403 (410)
                      ..++.+.|+.|++.|. .++-++.|+.+..|.|+|.|.|+++..++.|.+++.|+..+.|||++++++..+++.+.++|.
T Consensus       322 ssRI~~MR~aLrd~L~-aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAId  400 (410)
T KOG1412|consen  322 SSRIKKMRTALRDHLV-ALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAID  400 (410)
T ss_pred             HHHHHHHHHHHHHHHH-hcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHH
Confidence            9999999999999999 998888898899999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhc
Q 015283          404 DSYHNV  409 (410)
Q Consensus       404 ~~l~~~  409 (410)
                      ++++.+
T Consensus       401 e~Vr~~  406 (410)
T KOG1412|consen  401 ETVRAI  406 (410)
T ss_pred             HHHHhh
Confidence            988653

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-49  Score=356.49  Aligned_cols=368  Identities=14%  Similarity=0.091  Sum_probs=289.1

Q ss_pred             ccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283            8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia   87 (410)
                      .+..+++...|+...++.+..-+...+..  |+.|.|    ..++ |+.+.+++.+++.....++|++..|.++|+++++
T Consensus         7 ~~~~~l~~~~~~vw~e~~~la~e~~~~~~--LgqGfp----~~~~-P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~   79 (420)
T KOG0257|consen    7 LRNRNLSTSKPYVWTEINRLAAEHKVPNP--LGQGFP----DFPP-PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALA   79 (420)
T ss_pred             cccccccccCCcHHHHHHHHHHhcCCCCc--ccCCCC----CCCC-cHHHHHHHHHHhccchhccccccCCchHHHHHHH
Confidence            34556777777655566655555443322  999998    4443 7999999999987765689999999999999999


Q ss_pred             HHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee------cC
Q 015283           88 ELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY------DP  160 (410)
Q Consensus        88 ~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~------~~  160 (410)
                      +.+...+|....+ ++|++  |.|+.+++..+  ++..+.+||+|++.+|.|+.|......+|..++.+++.      ..
T Consensus        80 k~~se~~~~~~~~~~eVlV--T~GA~~ai~~~--~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s  155 (420)
T KOG0257|consen   80 KAYSEFYGGLLDPDDEVLV--TAGANEAISSA--LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSS  155 (420)
T ss_pred             HHHHHHhccccCCcccEEE--ecCchHHHHHH--HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccC
Confidence            9998867665555 46988  99999999987  66779999999999999999999999999999999986      35


Q ss_pred             CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          161 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       161 ~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                      ++|.+|.++++.++.+   +++++++|+||||||.++|+++|++|+++|++||+++|.||+|..+.+.+  .++..+..+
T Consensus       156 ~~~~~D~~~le~~~t~---kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~--~~h~r~asl  230 (420)
T KOG0257|consen  156 SDWTLDPEELESKITE---KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG--NKHIRIASL  230 (420)
T ss_pred             ccccCChHHHHhhccC---CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC--CcceeeecC
Confidence            6789999999999997   89999999999999999999999999999999999999999999999764  234444455


Q ss_pred             hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHH--HH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEW--KA  318 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~--~~  318 (410)
                      .+..++++.++|+||+||++|||+||+++   ++.++.....    .+......+++..|.+.+..+..+.....-  ..
T Consensus       231 Pgm~ertitvgS~gKtf~~TGWrlGW~ig---p~~L~~~~~~----vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y  303 (420)
T KOG0257|consen  231 PGMYERTITVGSFGKTFGVTGWRLGWAIG---PKHLYSALFP----VHQNFVFTCPTPIQEASAAAFALELACLQPGGSY  303 (420)
T ss_pred             CchhheEEEeccccceeeeeeeeeeeeec---hHHhhhhHHH----HhhccccccCcHHHHHHHHHHhhhhhccCCcchh
Confidence            56677999999999999999999999854   8775554433    333333344444455544444332100000  01


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------------HHHHHHhhhcCcEEEcC
Q 015283          319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------------KAQSDNMTNKWHVYMTK  381 (410)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ll~~~gi~v~~  381 (410)
                      ...+..+.++++|+.|.+.|. ++|    +++..|++++|+|.+++                 -.+..+++++.|+.+.|
T Consensus       304 ~~~~~~~~y~~krdil~k~L~-~lg----~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP  378 (420)
T KOG0257|consen  304 FITELVKEYKEKRDILAKALE-ELG----LKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIP  378 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcC----CccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeC
Confidence            234588999999999999999 998    58899999999998542                 12367889999999988


Q ss_pred             CC---------------eEEecCCCcccHHHHHHHHHH
Q 015283          382 DG---------------RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       382 ~g---------------Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      ..               |++++. +++.++.++++|+.
T Consensus       379 ~saF~s~~~~~~~~~~~r~~~~k-~~~~L~~a~e~l~~  415 (420)
T KOG0257|consen  379 PSAFGSREHIKVAERLVRFCFCK-ADETLRKAIERLKK  415 (420)
T ss_pred             chhcCCchhhHHHHHHHHHHHHh-hHHHHHHHHHHHhh
Confidence            62               888877 88999999999883

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=5.3e-48  Score=370.64  Aligned_cols=362  Identities=16%  Similarity=0.153  Sum_probs=286.4

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      |+...++...+++.+..+....   ..+++|+|+.|.|    +.++ ++.+.+++.+.+.... ..|++..|.++||+++
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~G~P----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~Lr~ai  100 (413)
T PLN00175         30 LQVAKRLEKFKTTIFTQMSSLA---IKHGAINLGQGFP----NFDG-PDFVKEAAIQAIRDGK-NQYARGFGVPELNSAI  100 (413)
T ss_pred             cchhHHhhcCCCCHHHHHHHHh---hcCCeEecCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCcCCCCCCHHHHHHH
Confidence            4444445555555443333222   2357999999998    3332 6788888888776543 7899999999999999


Q ss_pred             HHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           87 AELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        87 a~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      ++++.+.++..++++ +|++  |+|+++++.++  +...+.+||+|++++|+|+.|...++..|++++.+++.+ +++.+
T Consensus       101 a~~~~~~~g~~~~~~~~I~v--t~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~~  175 (413)
T PLN00175        101 AERFKKDTGLVVDPEKEVTV--TSGCTEAIAAT--ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRP-PDFAV  175 (413)
T ss_pred             HHHHHHHhCCCCCCCCCEEE--eCCHHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCc-ccCCC
Confidence            999988778888887 6988  99999999887  344578999999999999999999999999999999843 34889


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      |++.+++.+..   +++++++++||||||.++|.+++++|+++|++|+++||+||+|.++.+++   +..++..+....+
T Consensus       176 ~~~~l~~~~~~---~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~  249 (413)
T PLN00175        176 PEDELKAAFTS---KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYE  249 (413)
T ss_pred             CHHHHHHhcCc---CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcC
Confidence            99999998865   56777889999999999999999999999999999999999999998642   1223323333346


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      ++|+++||||.|+++|+|+||+++   ++++++.+....    .....+++...|.++..+|.+.      ..++++.++
T Consensus       250 ~vi~i~SfSK~~~~~G~RiG~~v~---~~~l~~~l~~~~----~~~~~~~s~~~Q~a~~~~l~~~------~~~~~~~~~  316 (413)
T PLN00175        250 RTVTMNSLGKTFSLTGWKIGWAIA---PPHLTWGVRQAH----SFLTFATATPMQWAAVAALRAP------ESYYEELKR  316 (413)
T ss_pred             cEEEEecchhhccCcchheeeeEe---CHHHHHHHHHHH----hhccCCCCHHHHHHHHHHHhCC------HHHHHHHHH
Confidence            899999999999999999999855   777666654432    2233467777888888888764      234678899


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------C-HHHHHHhhhcCcEEEcCC---------C----eE
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKD---------G----RI  385 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ll~~~gi~v~~~---------g----Ri  385 (410)
                      .++++++.+.+.|+ +.|    +.+..|++++|+|+.+      + .+++..+++++||.+.||         +    ||
T Consensus       317 ~~~~~~~~l~~~L~-~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRl  391 (413)
T PLN00175        317 DYSAKKDILVEGLK-EVG----FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRF  391 (413)
T ss_pred             HHHHHHHHHHHHHH-HCC----CeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEE
Confidence            99999999999999 776    4677889999999754      2 356778887789999885         1    99


Q ss_pred             EecCCCcccHHHHHHHHHHHhh
Q 015283          386 SLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       386 s~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      +++. +++++++++++|++.++
T Consensus       392 s~~~-~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        392 AFCK-DEETLRAAVERMKTKLK  412 (413)
T ss_pred             EEcC-CHHHHHHHHHHHHHHHh
Confidence            9987 89999999999999875

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.1e-47  Score=365.11  Aligned_cols=365  Identities=16%  Similarity=0.151  Sum_probs=282.9

Q ss_pred             cccccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK   84 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~   84 (410)
                      |++..+++...++.+..+.....+.  ..+++++|+.|.|    ..++ ++.+.+++.+.........|+ ..|.+++|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~   76 (399)
T PRK07681          3 YTLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNP----DMPP-ADFVREEMVHTANQKESYGYT-LSGIQEFHE   76 (399)
T ss_pred             ccHhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhccccCCCC-CCCcHHHHH
Confidence            4544556555666555554443322  2467899999987    3222 677888887766432224454 589999999


Q ss_pred             HHHHHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc
Q 015283           85 VTAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV  163 (410)
Q Consensus        85 aia~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  163 (410)
                      ++++++...+|..+++ ++|++  |+|+++++.+++  ...+.+||+|++++|+|+.|...++..|++++.+++.+++++
T Consensus        77 aia~~~~~~~g~~~~~~~~I~i--t~G~~~al~~~~--~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~  152 (399)
T PRK07681         77 AVTEYYNNTHNVILNADKEVLL--LMGSQDGLVHLP--MVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDF  152 (399)
T ss_pred             HHHHHHHHHhCCCCCCCCeEEE--CCCcHHHHHHHH--HHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCC
Confidence            9999998878888888 79999  999999999984  334779999999999999999999999999999998655568


Q ss_pred             ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283          164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR  243 (410)
Q Consensus       164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~  243 (410)
                      .+|++.+++.+.+   +++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+.+.  ...++..+...
T Consensus       153 ~~d~~~l~~~~~~---~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~  227 (399)
T PRK07681        153 LPDLELIPEEIAD---KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGA  227 (399)
T ss_pred             cCCHHHHHHhccc---cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCC
Confidence            8999999888764   677788899999999999999999999999999999999999999886422  11122222223


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++|+++||||.||++|+|+||++.   ++++++++....    .....+++.+.|.++..+|.+..      +++++.
T Consensus       228 ~~~~i~~~S~SK~~~~~GlRiG~~i~---~~~l~~~~~~~~----~~~~~~~s~~~q~~~~~~l~~~~------~~~~~~  294 (399)
T PRK07681        228 KEVGVEINSLSKSYSLAGSRIGYMIG---NEEIVRALTQFK----SNTDYGVFLPIQKAACAALRNGA------AFCEKN  294 (399)
T ss_pred             cccEEEEeecccccCCccceeEEEec---CHHHHHHHHHHH----hhcccCCCHHHHHHHHHHHhCcH------HHHHHH
Confidence            35799999999999999999999854   778666655432    22233577778888888887652      345677


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCCC----------eEEec
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG----------RISLA  388 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~g----------Ris~~  388 (410)
                      ++.++++++.+.+.|+ +.|    +.+..+.+|+|+|+.+     +.+++.++++++||.+.||.          ||+++
T Consensus       295 ~~~~~~~~~~l~~~L~-~~g----~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~  369 (399)
T PRK07681        295 RGIYQERRDTLVDGFR-TFG----WNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV  369 (399)
T ss_pred             HHHHHHHHHHHHHHHH-HCC----CcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec
Confidence            8889999999999998 776    4666788899999865     23567788876899998861          99998


Q ss_pred             CCCcccHHHHHHHHHHH
Q 015283          389 GLSLAKCEYLADAIIDS  405 (410)
Q Consensus       389 ~~~~~~i~~~~~~l~~~  405 (410)
                      . +++++++++++|+++
T Consensus       370 ~-~~~~~~~~l~~l~~~  385 (399)
T PRK07681        370 Q-DEEVLQQAVENIRNS  385 (399)
T ss_pred             C-CHHHHHHHHHHHHHh
Confidence            6 789999999999883

>PLN02187 rooty/superroot1

Probab=100.00  E-value=8e-47  Score=365.99  Aligned_cols=353  Identities=14%  Similarity=0.114  Sum_probs=275.1

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ++++|+|+.|+| +....+..++.+.+++.+.+..+....|.+..|.+++|+++++++...++..+++++|++  |+|++
T Consensus        65 ~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~i--t~G~~  141 (462)
T PLN02187         65 NKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFL--TAGCN  141 (462)
T ss_pred             CCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEE--eCCHH
Confidence            468999999987 222223346788888888775544467989999999999999999877788888999999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++.+++.  ..+.|||.|++++|+|+.|...++..|++++.+++.++++|.+|++.+++.+++   +++++++++||||
T Consensus       142 ~al~~~~~--~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~---~~~~v~i~nP~NP  216 (462)
T PLN02187        142 QGIEIVFE--SLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE---NTVAMVVINPNNP  216 (462)
T ss_pred             HHHHHHHH--HhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC---CcEEEEEeCCCCC
Confidence            99999843  336799999999999999999999999999999986567799999999988864   6778888999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|++||++||+||+|.++.+++.  ...++..+. ...++++++||||.|++||||+||+  ++.
T Consensus       217 TG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~~-~~~~vi~l~SfSK~f~~pGlRiG~~--v~~  291 (462)
T PLN02187        217 CGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKFA-SIVPVLTLAGISKGWVVPGWKIGWI--ALN  291 (462)
T ss_pred             CCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHhc-cCCcEEEEecchhhcCCccceeEEE--Eec
Confidence            99999999999999999999999999999999887532  122332322 2246999999999999999999998  443


Q ss_pred             Cch-hHHHHHHHHHhhccCc--ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283          273 SSD-LAARVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS  349 (410)
Q Consensus       273 ~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~  349 (410)
                      +++ .++ +.+.+.......  ..+++.+.|.++..+|.+..     .+++++.++.++++++++.+.|+ +++.   ..
T Consensus       292 ~p~~~~~-~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~-----~~~l~~~~~~l~~~r~~l~~~L~-~~~~---~~  361 (462)
T PLN02187        292 DPEGVFE-TTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD-----KNFFAKKNKILKHNVDLVCDRLK-DIPC---VV  361 (462)
T ss_pred             CchhHHH-HHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHHHHHh-hCCC---Cc
Confidence            333 222 112222222221  12457888888888886421     34567888999999999999998 7752   22


Q ss_pred             -cccCCcceeeecCC---------C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          350 -FILRQIGMFSFTGL---------N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       350 -~~~~~~~~~~~~~~---------~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       +..|++++|+|+.+         + .+++.++++++||.+.||.        ||+++. +++.+++++++|+++++.+
T Consensus       362 ~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~rL~~~l~~~  439 (462)
T PLN02187        362 CPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALERLKGFCTRH  439 (462)
T ss_pred             CCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence             34678899998743         1 2456778788899999972        999987 7899999999999998653

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=9.4e-47  Score=362.05  Aligned_cols=368  Identities=14%  Similarity=0.116  Sum_probs=281.4

Q ss_pred             CCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc
Q 015283           18 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV   97 (410)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~   97 (410)
                      .+++..+.+.+..+..+++|+|+.|+| |..+.-..++.+.+++.+.+.......|.|..|.+++|+++++++.+.++..
T Consensus        16 ~~~~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~   94 (409)
T PLN00143         16 DDAVKFLKENFNEDDHRLAISFGFGDP-SCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ   94 (409)
T ss_pred             HHHHHHHHHhcccCCCCceeeCCCCCC-CCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence            344555555566677789999999998 3222223478888988887765433679999999999999999998888888


Q ss_pred             ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283           98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA  177 (410)
Q Consensus        98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~  177 (410)
                      +++++|++  |+|+++++.++..  ..+.+||.|++++|+|+.|...++..|.+++.+++.+++++.+|++.+++.+.. 
T Consensus        95 ~~~~~I~i--t~G~~~al~~~~~--~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-  169 (409)
T PLN00143         95 LSPDDVYL--TLGCKHAAEIIIK--VLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE-  169 (409)
T ss_pred             CCHhhEEE--ecChHHHHHHHHH--HHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc-
Confidence            88999999  9999999999843  346799999999999999999999999999999885556788999999988764 


Q ss_pred             CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                        ++..++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++.  ...++.. ....+++++++||||.|
T Consensus       170 --~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~--~~~~~~~-~~~~~~vi~~~SfSK~f  244 (409)
T PLN00143        170 --NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK--PFVPMGL-FASIVPVITLGSISKRW  244 (409)
T ss_pred             --CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC--CCcchhh-hcccCcEEEEccchhhc
Confidence              567777789999999999999999999999999999999999999987421  1112222 23345899999999999


Q ss_pred             cccCCCcceEEEEeCCc-hhHHH--HHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSS-DLAAR--VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  334 (410)
                      ++||+|+||+  ++.++ .+++.  +...+..... ....++.+.|.++..+|.+..     .+++++.++.++++++.+
T Consensus       245 ~~pGlRvG~~--v~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~  316 (409)
T PLN00143        245 MIPGWGLGWL--VTCDPSGLLQICEIADSIKKALN-PAPFPPTFIQAAIPEILEKTT-----EDFFSKTINILRAALAFC  316 (409)
T ss_pred             CCCccceEEE--EeeCchhhhhhHHHHHHHHHHHh-ccCCCCchHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHHH
Confidence            9999999998  44333 33222  1222222222 122346678888888887531     223467777888888888


Q ss_pred             HHHhhhccCCCCCcc-cccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccH
Q 015283          335 FDSLSAKDKSGKDWS-FILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKC  395 (410)
Q Consensus       335 ~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i  395 (410)
                      .+.|. +++.   .. ...|++|+|+|+.+.          .+++.++++++||.+.||.        ||+++. +++++
T Consensus       317 ~~~L~-~~~~---~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l  391 (409)
T PLN00143        317 YDKLK-EIPC---IMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSL  391 (409)
T ss_pred             HHHHh-cCCC---CCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHH
Confidence            88888 7642   22 346789999998763          2346677777899999972        999986 78999


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      ++++++|++++.+.
T Consensus       392 ~~al~rl~~~l~~~  405 (409)
T PLN00143        392 EDGLGRLKSFCGRH  405 (409)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988653

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=7.2e-47  Score=361.64  Aligned_cols=342  Identities=14%  Similarity=0.123  Sum_probs=265.5

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCCh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG  111 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~gg  111 (410)
                      +.++|+|+.|++    ..++ ++.+.+++.+.........|++..|.++||+++++++.+.+|..++++ +|++  |+|+
T Consensus        29 ~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~Gs  101 (388)
T PRK07366         29 GKELIDLSLGSS----DLPA-PAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLP--LIGS  101 (388)
T ss_pred             CCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEE--CCCc
Confidence            457899999987    3333 678888887766443336798889999999999999987778888888 6998  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++.++.  ...+.+||+|++++|+|+.|...++..|++++.+++.+++++.+|++++++.+..   +++++++++|||
T Consensus       102 ~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~~p~N  176 (388)
T PRK07366        102 QEGTAHLP--LAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA---QARLMVLSYPHN  176 (388)
T ss_pred             HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc---cceEEEEeCCCC
Confidence            99999974  3346799999999999999999999999999999986555678899999877754   566777899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.++|.+++++|+++|++||++||+||+|.++.+.+.. ...++..+....+++++++||||+||+||+|+||++.  
T Consensus       177 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~--  253 (388)
T PRK07366        177 PTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV-EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG--  253 (388)
T ss_pred             CCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC-CCCChhhCCCCcccEEEEeecccccCCcchhheehcC--
Confidence            9999999999999999999999999999999999864311 0122222222334789999999999999999999854  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++++.....    ....+.+...+.++...+.+.      .+++++.++.++++++.+.+.|+ +.+    +.+.
T Consensus       254 -~~~li~~l~~~~~----~~~~~~~~~~~~~a~~~l~~~------~~~l~~~~~~~~~~r~~l~~~L~-~~~----~~~~  317 (388)
T PRK07366        254 -NAQLIQALRQVKA----VVDFNQYRGILNGAIAALTGP------QATVQQTVQIFRQRRDAFINALH-QIG----WPVP  317 (388)
T ss_pred             -CHHHHHHHHHHHh----hcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Cccc
Confidence             8887766655332    111233232233343334321      24567889999999999999998 776    4566


Q ss_pred             cCCcceeeecCCC-------HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHh
Q 015283          352 LRQIGMFSFTGLN-------KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       352 ~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      .|.+|+|+|+.+.       .+++.++++++||.+.||        +  ||+++. +++++++++++|++.+
T Consensus       318 ~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l  388 (388)
T PRK07366        318 LPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL  388 (388)
T ss_pred             CCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence            7889999998652       344667777789999996        1  999986 8899999999998763

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=6e-46  Score=357.68  Aligned_cols=354  Identities=16%  Similarity=0.167  Sum_probs=279.3

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +.++|+|+.|+| +..+....++.+.+++.+++..+....|++..|.+++|+++++++...++..+++++|++  |+|++
T Consensus        51 ~~~~i~l~~G~P-~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~~  127 (430)
T PLN00145         51 PRPVLPLGHGDP-SAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGCA  127 (430)
T ss_pred             CCCeeeCCCCCC-CCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCHH
Confidence            457999999988 322223346888999888876544367988899999999999999888888888999999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++.++...+  ..+||+|++++|+|+.|.......|++++.+++.++++|.+|++.+++.+++   +++++++++|+||
T Consensus       128 ~al~l~~~~l--~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~P~NP  202 (430)
T PLN00145        128 QAIEIIMSVL--AQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE---NTVAMVIINPNNP  202 (430)
T ss_pred             HHHHHHHHHh--cCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc---CceEEEEeCCCCC
Confidence            9999984433  6799999999999999999999999999999876667789999999988875   6778888999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|+++|++||+||+|.++.+++.  ...++..+ ....++|+++||||.|++||||+||+++ ..
T Consensus       203 tG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pG~RlG~iv~-~~  278 (430)
T PLN00145        203 CGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVF-GEVAPVLTLGSISKRWVVPGWRLGWIAT-CD  278 (430)
T ss_pred             CCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--Cccchhhh-cccCcEEEEeccccccCCCCeeEEEEEE-ec
Confidence            99999999999999999999999999999999887531  11222222 2345899999999999999999999843 12


Q ss_pred             CchhHHH--HHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          273 SSDLAAR--VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       273 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                      ++.+++.  +...+.... .....++.+.|.++..+|.+..     .+++++.++.++++++.+.+.|+ +++.   +.+
T Consensus       279 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~-~~~g---~~~  348 (430)
T PLN00145        279 PNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTK-----EEFFTKTLGLLKETADICYEKIK-EIKC---ITC  348 (430)
T ss_pred             chhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHHHHh-cCCC---CCC
Confidence            3343332  223333332 2333567788888888887531     34567888999999999999998 7631   343


Q ss_pred             -ccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          351 -ILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       351 -~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       ..|++++|+|+.++          .+++.++++++||.+.||.        ||+++. +.+++++++++|++++.+.
T Consensus       349 ~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~  425 (430)
T PLN00145        349 PHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRH  425 (430)
T ss_pred             CcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence             46899999998652          2467788888899999972        999986 8899999999999988653

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=3.7e-46  Score=364.75  Aligned_cols=360  Identities=18%  Similarity=0.141  Sum_probs=274.9

Q ss_pred             CCeeeeeeeeeec---------------CCC---------cccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHH
Q 015283           34 EKKLNLGVGAYRT---------------EEL---------QPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus        34 ~~~i~l~~g~~~~---------------~~~---------~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia   87 (410)
                      .++|+|+.|+|.+               ...         ....|..+.+++.+++..  .....|++..|.+++|++++
T Consensus        46 ~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia  125 (481)
T PTZ00377         46 DSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVA  125 (481)
T ss_pred             ceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHH
Confidence            5899999999921               111         011245666666655433  12366999999999999999


Q ss_pred             HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283           88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD  166 (410)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  166 (410)
                      +++.+.+|..+++++|++  |+|+++++.+++.  ..+ .+||.|++++|+|+.|...++..|.+++.+++.++++|.+|
T Consensus       126 ~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~~--~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d  201 (481)
T PTZ00377        126 AFIERRDGVPKDPSDIFL--TDGASSGIKLLLQ--LLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLD  201 (481)
T ss_pred             HHHHHhcCCCCChhhEEE--cCCHHHHHHHHHH--HhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCC
Confidence            999888888889999999  9999999999843  336 59999999999999999999999999999998666778999


Q ss_pred             hhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh--
Q 015283          167 FEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--  241 (410)
Q Consensus       167 ~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--  241 (410)
                      ++.+++.+.+.   ..+++++++++||||||.++|.+++++|+++|++|+++||+||+|..+.+.+. ....++....  
T Consensus       202 ~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~~~~~  280 (481)
T PTZ00377        202 QEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE-KPFISFRKVLLE  280 (481)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC-CCcccHHHHHHh
Confidence            99999988641   12566677789999999999999999999999999999999999999886321 1222322221  


Q ss_pred             --hc---CCcEEEEeccccc-ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh----h
Q 015283          242 --TR---GMELLVAQSYSKN-LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP----A  311 (410)
Q Consensus       242 --~~---~~~~i~~~S~sK~-~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~  311 (410)
                        ..   ..++++++||||. +++||||+||+++...++++++++.+.    .. ...+++.++|.++..+|++.    .
T Consensus       281 l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~----~~-~~~~~~~~~Q~a~~~~l~~~~~~~~  355 (481)
T PTZ00377        281 LPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKL----AS-INLCSNVVGQLMTGLMCNPPREGDA  355 (481)
T ss_pred             hcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHH----hh-eecCCChHHHHHHHHHhCCCCCCcc
Confidence              11   1268999999997 599999999984322467766665542    22 23347778888888888642    1


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------------HHHHHHhhhc
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------------KAQSDNMTNK  374 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ll~~  374 (410)
                      ....|.+++++.++.++++++.+.+.|+ +++  + +.+..|++|+|+|+.+.                 ..++..++++
T Consensus       356 ~~~~~~~~~~~~~~~~~~rr~~l~~~L~-~~~--g-~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~  431 (481)
T PTZ00377        356 SYPLYKRERDAIFTSLKRRAELLTDELN-KIE--G-VSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLES  431 (481)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC--C-cEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHH
Confidence            2233556667777788999999999998 773  1 57788999999996431                 1235678888


Q ss_pred             CcEEEcCCC-----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          375 WHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       375 ~gi~v~~~g-----------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +||.+.||.           |||++ .+++++++++++|++++++
T Consensus       432 ~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~  475 (481)
T PTZ00377        432 TGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHES  475 (481)
T ss_pred             cCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHH
Confidence            899999862           99998 4888999999999998865

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=2.3e-46  Score=358.06  Aligned_cols=362  Identities=14%  Similarity=0.153  Sum_probs=275.3

Q ss_pred             cCCCCCCCCCcccchhHhh--hcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283           11 EGVTMAPPDPILGVSEAFK--ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      .++...++..+..+.....  ...++++|+|+.|.|    ..+ .++.+.+++.+.+.......|+|..|.++||+++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~   81 (389)
T PRK08068          7 ELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNP----DQP-TPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAAD   81 (389)
T ss_pred             hHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Confidence            3344444444444443332  122357899999987    332 256788888877654434679889999999999999


Q ss_pred             HhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283           89 LLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF  167 (410)
Q Consensus        89 ~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  167 (410)
                      ++...+|..++++ +|++  |+|+++++..+  +...+.+||+|++++|+|+.|...++..|++++.+++.+++++.+|+
T Consensus        82 ~~~~~~g~~~~~~~~i~i--t~G~~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~  157 (389)
T PRK08068         82 FYKREYGVTLDPETEVAI--LFGGKAGLVEL--PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDY  157 (389)
T ss_pred             HHHHHhCCCCCCCccEEE--cCCcHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCH
Confidence            9877777777888 7988  99999999887  34446799999999999999999999999999999985555788899


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +++++.+.+   ++.++++++||||||.++|.+++++|+++|++|+++||+||+|.++.+.+  ....+.....+..+++
T Consensus       158 ~~l~~~~~~---~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~--~~~~s~~~~~~~~~~~  232 (389)
T PRK08068        158 TKIPEEVAE---KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDG--QKPVSFLQTPGAKDVG  232 (389)
T ss_pred             HHHHHhccc---cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCC--CCCcChhhCCCccCCE
Confidence            999988864   56777778999999999999999999999999999999999999887642  1111221222234578


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      ++++||||.||++|+|+||++.   ++++++.+.....    ....+++...|.++...+.+.      .+++++.++++
T Consensus       233 i~~~S~SK~~g~~GlRiG~~~~---~~~l~~~l~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~  299 (389)
T PRK08068        233 IELYTLSKTFNMAGWRVAFAVG---NESVIEAINLLQD----HLFVSLFGAIQDAAIEALLSD------QSCVAELVARY  299 (389)
T ss_pred             EEEecchhccCCccceeEeEec---CHHHHHHHHHHHh----hccCCCChHHHHHHHHHHhCc------HHHHHHHHHHH
Confidence            9999999999999999999854   7887666655432    222344555667776666543      13457888999


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCc
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSL  392 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~  392 (410)
                      +++++.+.+.|+ +.|    +.+.++.+++|+|+.+    + .++.+.+++++||.+.|+.          ||+++. ++
T Consensus       300 ~~~r~~~~~~L~-~~g----~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~  373 (389)
T PRK08068        300 ESRRNAFISACR-EIG----WEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DE  373 (389)
T ss_pred             HHHHHHHHHHHH-HCC----CcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CH
Confidence            999999999998 876    4667788999999855    2 3456777766799998851          999976 77


Q ss_pred             ccHHHHHHHHHHH
Q 015283          393 AKCEYLADAIIDS  405 (410)
Q Consensus       393 ~~i~~~~~~l~~~  405 (410)
                      +.+.+++++|+++
T Consensus       374 ~~l~~al~~l~~~  386 (389)
T PRK08068        374 ERLREAVERIGKL  386 (389)
T ss_pred             HHHHHHHHHHHHh
Confidence            8888888888764

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=6.3e-46  Score=356.60  Aligned_cols=352  Identities=17%  Similarity=0.138  Sum_probs=277.9

Q ss_pred             hcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           30 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        30 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      +..+.++|+|+.|+| +......+++.+.+++.+++.......|.+..|.+++|+++++++...++..+++++|++  |+
T Consensus        27 ~~~~~~~i~l~~G~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~  103 (409)
T PLN02656         27 EENGKRVISLGMGDP-TAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFI--TS  103 (409)
T ss_pred             cccCCeeeecCCCCC-CcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE--eC
Confidence            344568999999998 221223347899999888776544478999999999999999999887788888999999  99


Q ss_pred             ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283          110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA  189 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p  189 (410)
                      |+++++.++..  ..+.+||+|++++|+|+.|.......|++++.+++.+++++.+|++.+++.+++   +++++++++|
T Consensus       104 G~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~P  178 (409)
T PLN02656        104 GCTQAIDVALS--MLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ---NTVALVIINP  178 (409)
T ss_pred             ChHHHHHHHHH--HHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc---CceEEEEECC
Confidence            99999998843  346799999999999999988888899999999985556788999999988865   5677788999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      +||||.+++.+++++|+++|++++++||+||+|.++.+++.  ...++..+ ....++++++||||.|++||+|+||++ 
T Consensus       179 ~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlRiG~~i-  254 (409)
T PLN02656        179 GNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-GSIVPVLTLGSLSKRWIVPGWRLGWFV-  254 (409)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-cccCcEEEEcccchhccCcceeEEEEE-
Confidence            99999999999999999999999999999999999987531  11222222 334589999999999999999999984 


Q ss_pred             EeC-------CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          270 VCS-------SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       270 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                       +.       ++++++++....    . .+.+++.+.|.++..+|++..     .+++++.++.++++++.+.+.|+ ++
T Consensus       255 -~~~~~~~~~~~~~~~~~~~~~----~-~~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~r~~~~~~L~-~~  322 (409)
T PLN02656        255 -TTDPSGSFRDPKIVERIKKYF----D-ILGGPATFIQAAVPTILEQTD-----ESFFKKTINILKQSSDICCDRIK-EI  322 (409)
T ss_pred             -EeCcccccccHHHHHHHHHHH----h-hhcCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHHHHHh-hC
Confidence             33       245555544322    2 233567788888888887531     23467888899999999999998 76


Q ss_pred             CCCCCcc-cccCCcceeeecCCC---------H-HHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHH
Q 015283          343 KSGKDWS-FILRQIGMFSFTGLN---------K-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAII  403 (410)
Q Consensus       343 g~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~  403 (410)
                      +.   +. ...|.+|+|+|+.+.         . +++.+++++.||.+.||.        ||+++. +++++++++++|+
T Consensus       323 ~~---~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~eal~rl~  398 (409)
T PLN02656        323 PC---ITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLEEALGRIK  398 (409)
T ss_pred             CC---CcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHHHHHHHHH
Confidence            42   22 357889999998652         2 346677777899999972        999997 8999999999999


Q ss_pred             HHhhhc
Q 015283          404 DSYHNV  409 (410)
Q Consensus       404 ~~l~~~  409 (410)
                      +++.+.
T Consensus       399 ~~~~~~  404 (409)
T PLN02656        399 SFYLRH  404 (409)
T ss_pred             HHHHHh
Confidence            988653

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=7.4e-46  Score=357.95  Aligned_cols=355  Identities=13%  Similarity=0.105  Sum_probs=273.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++++++.|+| +..+.+ +|+.+.+++.+.........|++..|.++||+++++++.+.+|..+++++|++  |+|+++
T Consensus        32 ~~~~~~~~G~p-~~~~~~-~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G~~~  107 (433)
T PRK06855         32 VKITWENIGDP-IAKGEK-IPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNGLGD  107 (433)
T ss_pred             ccccccccCCC-cccCCC-CCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCcHHH
Confidence            46899999987 322333 36788888877764433478999999999999999999888888889999999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++..+.   ..+.+||.|++++|+|+.|.... ...|.+++.+++.++++|.+|++.+++.+++. ++++++++++||||
T Consensus       108 al~~~~---~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~l~~P~NP  183 (433)
T PRK06855        108 AIAKIY---GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN-PSIAGILLINPDNP  183 (433)
T ss_pred             HHHHHH---HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC-CCceEEEEECCCCC
Confidence            998873   34679999999999999987543 35688888888855567889999999998742 24566777899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.++|.+++++|+++|++||++||+||+|.++.+.+.  ...++..+.. ...+|+++||||.+++||+|+||+++...
T Consensus       184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p~~  260 (433)
T PRK06855        184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK--KTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVYNA  260 (433)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEeCC
Confidence            99999999999999999999999999999999987431  2223333322 23679999999999999999999843111


Q ss_pred             -CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          273 -SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       273 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       .+..+..+...+..... ...+++.+.|.++..+++++.+    ++++++.++.++++++.+.+.|+ +..  + +.+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~L~-~~~--~-~~~~  331 (433)
T PRK06855        261 DKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEY----KNYLKERNKRYEKRSNIAYEKLK-DVP--G-LKVN  331 (433)
T ss_pred             chhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcH----HHHHHHHHHHHHHHHHHHHHHHh-cCC--C-eecc
Confidence             11222223333332222 2235677889999989887654    45678889999999999999998 762  1 4677


Q ss_pred             cCCcceeeecCCCH--------------------------------HHHHHhhhcCcEEEcCCC---------eEEecCC
Q 015283          352 LRQIGMFSFTGLNK--------------------------------AQSDNMTNKWHVYMTKDG---------RISLAGL  390 (410)
Q Consensus       352 ~~~~~~~~~~~~~~--------------------------------~~~~~ll~~~gi~v~~~g---------Ris~~~~  390 (410)
                      .|++|+|+|+.+..                                +++..++++.||.+.||.         |||++..
T Consensus       332 ~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~  411 (433)
T PRK06855        332 RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLER  411 (433)
T ss_pred             CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCC
Confidence            89999999986631                                345567777899999982         9999977


Q ss_pred             CcccHHHHHHHHHHHhhh
Q 015283          391 SLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++++|++++.+
T Consensus       412 ~~~~i~~~~~~l~~~~~~  429 (433)
T PRK06855        412 DEEKFEWIYQTLAEKIEE  429 (433)
T ss_pred             cHHHHHHHHHHHHHHHHH
Confidence            899999999999999875

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=7.6e-46  Score=365.41  Aligned_cols=377  Identities=19%  Similarity=0.166  Sum_probs=284.3

Q ss_pred             cccccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK   84 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~   84 (410)
                      |..+.++..++++.+..+......  ..+.++|+|+.|.| +..+++ .|+.+.+++.+.+..  ...|++..|.++||+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p-~~~~~~-~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lRe  192 (517)
T PRK13355        117 FKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNP-APFGFR-TPDEVVYDMAQQLTD--TEGYSDSKGLFSARK  192 (517)
T ss_pred             CChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCC-CcCCCC-CCHHHHHHHHHHhhc--CCCCCCCcChHHHHH
Confidence            444555666666555444433332  23468999999998 333443 367888888776643  367999999999999


Q ss_pred             HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283           85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG  164 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~  164 (410)
                      ++++++....+..+++++|++  |+|+++++.++..  ..+.+||+|++++|+|+.|...++..|.+++.+++.++++|.
T Consensus       193 aia~~~~~~~~~~~~~~~I~i--t~G~~eal~~~~~--~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~  268 (517)
T PRK13355        193 AIMQYAQLKGLPNVDVDDIYT--GNGVSELINLSMS--ALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY  268 (517)
T ss_pred             HHHHHHHhcCCCCCChhHEEE--eCcHHHHHHHHHH--HhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence            999998776655678999999  9999999999843  347799999999999999999999999999999886556789


Q ss_pred             cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      +|++++++.+..   +++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++.  ...++..+. ..
T Consensus       269 ~d~~~l~~~~~~---~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~~-~~  342 (517)
T PRK13355        269 PDIDDIRSKITS---RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASLA-PD  342 (517)
T ss_pred             CCHHHHHHhcCc---CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHhC-CC
Confidence            999999998864   678888899999999999999999999999999999999999999986531  122322221 12


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA  324 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~  324 (410)
                      ..+++++||||.|+++|||+||+++ ..++++++.+...+.... ....+++..+|.++..+|.+...   +.+++.+. 
T Consensus       343 ~~vi~~~S~SK~~~~~G~RiG~~i~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~---~~~~~~~~-  416 (517)
T PRK13355        343 LFCVTFSGLSKSHMIAGYRIGWMIL-SGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQS---VKDYLVPG-  416 (517)
T ss_pred             CeEEEEecchhhccCcccceEEEEe-eCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCcc---HHHHHHHH-
Confidence            2478889999999999999999853 235555555554443322 22235667788888888865322   13334443 


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------CHHHHHHhhhcCcEEEcCCC----------eE
Q 015283          325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------NKAQSDNMTNKWHVYMTKDG----------RI  385 (410)
Q Consensus       325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~v~~~g----------Ri  385 (410)
                      +++.++++++.+.|+ +++  + +.+..|++++|+|+.+         +.+++.+++++.||.+.||.          ||
T Consensus       417 ~~~~~~r~~l~~~L~-~~~--g-~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ri  492 (517)
T PRK13355        417 GRVYEQRELVYNALN-AIP--G-ISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRV  492 (517)
T ss_pred             HHHHHHHHHHHHHHh-cCC--C-cccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEE
Confidence            334456788999998 772  1 5788899999999654         23567788888899999862          99


Q ss_pred             EecCCCcccHHHHHHHHHHHhhh
Q 015283          386 SLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       386 s~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +++. +++++++++++|++.+..
T Consensus       493 s~~~-~~~~l~~a~~rl~~~~~~  514 (517)
T PRK13355        493 VYLP-RLEDLEDAMDRLADFFSY  514 (517)
T ss_pred             EeCC-CHHHHHHHHHHHHHHHHH
Confidence            9975 899999999999999865

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.2e-46  Score=356.38  Aligned_cols=347  Identities=13%  Similarity=0.132  Sum_probs=267.6

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCCh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG  111 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~gg  111 (410)
                      ++++++|+.|.|    ..+ .++.+.+++.+.........|++..|.+++|+++++++.+.++..++++ +|++  |+|+
T Consensus        32 ~~~~~~l~~g~p----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~i--t~G~  104 (403)
T PRK08636         32 GEDIIDFSMGNP----DGP-TPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVA--TMGS  104 (403)
T ss_pred             CCCEEEcCCcCC----CCC-CCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--CCCh
Confidence            357899999987    222 2455666655544332237899899999999999999977778878887 7999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH----HHHHhcCCCCcEEEEeC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM----IADIKAAPGGSFILLHG  187 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l----~~~i~~~~~~~~~ii~~  187 (410)
                      ++++.+++.  ..+.+||.|++++|+|+.+...++..|++++.+++..++++++|++.+    ++.+++..+++++++++
T Consensus       105 ~~al~~~~~--~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~  182 (403)
T PRK08636        105 KEGYVHLVQ--AITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVN  182 (403)
T ss_pred             HHHHHHHHH--HhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEe
Confidence            999999843  346799999999999999999999999999999874345678998755    55555434567888889


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM  267 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l  267 (410)
                      +||||||.++|.+++++|+++|++|+++||+||+|.++.+++.  ...++..+....+.+++++||||.||+||+|+||+
T Consensus       183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i  260 (403)
T PRK08636        183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFV  260 (403)
T ss_pred             CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCCccccEEEEEecccccCCccceeeee
Confidence            9999999999999999999999999999999999999886421  11222222222346788999999999999999997


Q ss_pred             EEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283          268 NVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD  347 (410)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~  347 (410)
                      +.   ++++++++.....    ....+++...|.++..++.+.      .+++++.++.++++++.+.+.|+ +.+    
T Consensus       261 v~---~~~li~~~~~~~~----~~~~~~~~~~q~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~----  322 (403)
T PRK08636        261 VG---NKKLVGALKKIKS----WLDYGMFTPIQVAATIALDGD------QSCVEEIRETYRKRRDVLIESFA-NAG----  322 (403)
T ss_pred             eC---CHHHHHHHHHHHH----HhcccCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----
Confidence            44   7887766655332    111234455666666555432      24467888999999999999998 765    


Q ss_pred             cccccCCcceeeecCCC--------HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          348 WSFILRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       348 ~~~~~~~~~~~~~~~~~--------~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.+..+.+|+|+|+.+.        .+++.++++++||.+.||.          ||+++. +++++++++++|+++++.+
T Consensus       323 ~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~~~rl~~~l~~~  401 (403)
T PRK08636        323 WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIE-NENRIRQAARNIKKFLKEL  401 (403)
T ss_pred             CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence            46677889999998663        3456677777899999971          999984 8999999999999998764

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.5e-46  Score=355.38  Aligned_cols=345  Identities=17%  Similarity=0.163  Sum_probs=270.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-CceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~ggt  112 (410)
                      .+.|+|+.|.+    .....++.+.+++.+.+.......|++..|.+++|+++++++.+.+|..+++ ++|++  |+|++
T Consensus        39 ~~~i~l~~g~~----~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~i--t~Ga~  112 (405)
T PRK06207         39 GRPVDFSHGDV----DAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELII--TPGTQ  112 (405)
T ss_pred             CCceecCCcCC----CCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCCcH
Confidence            36799999987    2212357888887777654333679888999999999999998877877777 89999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee---cCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY---DPKTVGLDFEGMIADIKAAPGGSFILLHGCA  189 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p  189 (410)
                      +++.++.  ...+.+||+|++++|+|+.+...++..|++++.+++.   .++++++|++.+++.+.+   +++++++++|
T Consensus       113 ~al~~~~--~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~---~~k~v~l~~P  187 (405)
T PRK06207        113 GALFLAV--AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA---GVRVFLFSNP  187 (405)
T ss_pred             HHHHHHH--HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh---cCeEEEECCC
Confidence            9999874  3347799999999999999999999999999999874   224688999999998875   5677788999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      |||||.+++.+++++|+++|++||++||+||+|.++.+.+.  ...++..+....+++++++||||.|++||+|+||++.
T Consensus       188 ~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~  265 (405)
T PRK06207        188 NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG  265 (405)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc
Confidence            99999999999999999999999999999999999986431  1112222222346899999999999999999999854


Q ss_pred             EeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283          270 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS  349 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~  349 (410)
                         ++++++++.....    ....+.+.+.|.++..+|++..      .++++..+.++++++.+.+.|+ +++.   +.
T Consensus       266 ---~~~l~~~~~~~~~----~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~  328 (405)
T PRK06207        266 ---SPAIIDRMEKLQA----IVSLRAAGYSQAVLRTWFSEPD------GWMKDRIARHQAIRDDLLRVLR-GVEG---VF  328 (405)
T ss_pred             ---CHHHHHHHHHHHh----HhccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHh-cCCC---ce
Confidence               7786666654332    2223556678888888887531      1234555667778888888888 7631   56


Q ss_pred             cccCCcceeeecCCC------HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          350 FILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       350 ~~~~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +..|.+|+|+|+.+.      .++..++++++||.+.||.          |||++. +.+++++++++|+++++++
T Consensus       329 ~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~  403 (405)
T PRK06207        329 VRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERY  403 (405)
T ss_pred             ecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            677889999998652      3356677666899999962          999987 8899999999999998764

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=6e-46  Score=355.06  Aligned_cols=365  Identities=18%  Similarity=0.152  Sum_probs=276.9

Q ss_pred             cccccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK   84 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~   84 (410)
                      |++..++....+.....+.+...+.  ..+++++|+.|.+    ..+ +++.+.+++.+.+.......|++..|.+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~   76 (385)
T PRK09276          2 MKLADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDP----DLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRK   76 (385)
T ss_pred             cchhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHH
Confidence            3444455555555444434333322  3457899999987    332 26788888887765433367988899999999


Q ss_pred             HHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc
Q 015283           85 VTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV  163 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  163 (410)
                      ++++++.+.+|..++++ +|++  |+|+++++..+...  .+.+||+|++++|+|+.|...++..|.+++.+++.+++++
T Consensus        77 aia~~~~~~~g~~~~~~~~ii~--t~G~~~~i~~~~~~--~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~  152 (385)
T PRK09276         77 AVADWYKRRFGVELDPETEVIS--LIGSKEGIAHIPLA--FVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGF  152 (385)
T ss_pred             HHHHHHHHHhCCCCCCCCcEEE--ccCcHHHHHHHHHH--hCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCC
Confidence            99999987777777776 4887  89999999998433  3679999999999999999999999999999998555567


Q ss_pred             ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283          164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR  243 (410)
Q Consensus       164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~  243 (410)
                      .+|++.+++.+.+   +++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++..  ..++..+...
T Consensus       153 ~~d~~~l~~~~~~---~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~  227 (385)
T PRK09276        153 LPDLDAIPEDVAK---KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYK--PPSFLEVPGA  227 (385)
T ss_pred             cCCHHHHHHhccc---cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCC--CCChhccCCC
Confidence            8899999887764   6677778899999999999999999999999999999999999998764211  1222222222


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++++++||||.||++|+|+||+++   ++++++++.....    ....+++...|.++..+|.+.      .+++++.
T Consensus       228 ~~~~i~~~S~SK~~g~~GlRiG~~i~---~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~  294 (385)
T PRK09276        228 KDVGIEFHSLSKTYNMTGWRIGFAVG---NADLIAGLGKVKS----NVDSGVFQAIQEAGIAALNGP------QEVVEEL  294 (385)
T ss_pred             cCCEEEEecchhhcCCcchhheeeeC---CHHHHHHHHHHHh----hccCCCCHHHHHHHHHHHcCc------HHHHHHH
Confidence            35789999999999999999999854   7786666654322    222345556777777777642      3445788


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCC--------C--eEEec
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLA  388 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~  388 (410)
                      +++++++++++.+.|+ +.+    +.+..+.+++|+|+.+    + .+++.++++++||.+.||        +  ||+++
T Consensus       295 ~~~~~~~~~~l~~~L~-~~~----~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~  369 (385)
T PRK09276        295 RKIYQERRDILVEGLR-KLG----LEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT  369 (385)
T ss_pred             HHHHHHHHHHHHHHHH-hCC----CcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC
Confidence            8899999999999998 776    4667788899999865    2 345677777789999996        1  99998


Q ss_pred             CCCcccHHHHHHHHHH
Q 015283          389 GLSLAKCEYLADAIID  404 (410)
Q Consensus       389 ~~~~~~i~~~~~~l~~  404 (410)
                      . +++++.+++++|++
T Consensus       370 ~-~~~~l~~~l~~l~~  384 (385)
T PRK09276        370 V-PDERIEEAVERIKK  384 (385)
T ss_pred             C-CHHHHHHHHHHHhh
Confidence            5 78888888888864

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=8.3e-46  Score=354.02  Aligned_cols=360  Identities=16%  Similarity=0.192  Sum_probs=282.9

Q ss_pred             cCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283           11 EGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      .+++..++..+..+.....+  ...+++++|+.|.+    +.+ +++.+.+++.+.+.... ..|.+..|.+++|+++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~   80 (387)
T PRK08960          7 RRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEP----DFT-TAEPIVAAGQAALAAGH-TRYTAARGLPALREAIAG   80 (387)
T ss_pred             hHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCC----CCC-CCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHH
Confidence            34555666666665544432  23467899999998    333 37889999888776443 679889999999999999


Q ss_pred             HhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283           89 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE  168 (410)
Q Consensus        89 ~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  168 (410)
                      ++...+|..+++++|++  |+|+++++.++..  ..+.+||+|++++|+|+.+...+...|.+++.+++.++.++.+|++
T Consensus        81 ~~~~~~g~~~~~~~i~i--t~G~~~al~~~~~--~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  156 (387)
T PRK08960         81 FYAQRYGVDVDPERILV--TPGGSGALLLASS--LLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPA  156 (387)
T ss_pred             HHHHHhCCCCChhhEEE--ccCcHHHHHHHHH--HhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHH
Confidence            99877788888999999  9999999999843  3377999999999999999999999999999999854456789999


Q ss_pred             hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283          169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL  248 (410)
Q Consensus       169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i  248 (410)
                      .+++.+++   +++++++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++   ...++   ....++++
T Consensus       157 ~l~~~~~~---~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~---~~~~~---~~~~~~vi  227 (387)
T PRK08960        157 LVERHWNA---DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV---DAASV---LEVDDDAF  227 (387)
T ss_pred             HHHHHhCc---cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCh---hhccCCEE
Confidence            99988875   56677789999999999999999999999999999999999999987642   11121   23346899


Q ss_pred             EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +++||||.+|++|+|+||+++   ++++++++...    ......+++.+.|.++...+.+.     +.+++++.++.++
T Consensus       228 ~~~S~SK~~g~~GlRiG~~~~---~~~~~~~~~~~----~~~~~~~~s~~~q~a~~~~l~~~-----~~~~l~~~~~~~~  295 (387)
T PRK08960        228 VLNSFSKYFGMTGWRLGWLVA---PPAAVPELEKL----AQNLYISASTPAQHAALACFEPE-----TLAILEARRAEFA  295 (387)
T ss_pred             EEeecccccCCcccEEEEEEc---CHHHHHHHHHH----HhhhccCCCHHHHHHHHHHhhcC-----cHHHHHHHHHHHH
Confidence            999999999999999999855   77766655442    22223356778888887777643     1345678889999


Q ss_pred             HHHHHHHHHhhhccCCCCCccc-ccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCC---------C--eEEecCC
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD---------G--RISLAGL  390 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~---------g--Ris~~~~  390 (410)
                      ++++.+.+.|+ +.|.    .. ..|.+++|+|+.+     + .+++.++++++||.+.||         +  ||+++. 
T Consensus       296 ~~~~~l~~~L~-~~~~----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-  369 (387)
T PRK08960        296 RRRDFLLPALR-ELGF----GIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-  369 (387)
T ss_pred             HHHHHHHHHHH-hcCC----cCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-
Confidence            99999999998 7763    33 4578899999754     2 345667777789999986         1  999987 


Q ss_pred             CcccHHHHHHHHHHHhh
Q 015283          391 SLAKCEYLADAIIDSYH  407 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~  407 (410)
                      +.+++.+++++|++++.
T Consensus       370 ~~~~l~~al~~l~~~~~  386 (387)
T PRK08960        370 SLPRLQEAVERIARGLR  386 (387)
T ss_pred             CHHHHHHHHHHHHHHHh
Confidence            78899999999988764

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=6.4e-46  Score=353.99  Aligned_cols=341  Identities=16%  Similarity=0.143  Sum_probs=274.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt  112 (410)
                      ++.|+|+.|.+    ..+ .++.+.+++.+.+.... ..|++..|.+++|+++++++.+.++..++++ +|++  |+|++
T Consensus        20 ~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~   91 (378)
T PRK07682         20 EGVISLGVGEP----DFV-TPWNVREASIRSLEQGY-TSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV--TVGAS   91 (378)
T ss_pred             CCeEEeCCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence            47899999998    222 25667777777665433 6798889999999999999987777777775 7999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++.++.  ...+.+||+|++++|+|+.|...++..|.+++.+++..++++.+|++.+++.+.+   +++++++++||||
T Consensus        92 ~al~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~~~~p~NP  166 (378)
T PRK07682         92 QALDVAM--RAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA---KTKAILLCSPNNP  166 (378)
T ss_pred             HHHHHHH--HHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc---ccEEEEEECCCCC
Confidence            9999884  3346799999999999999999999999999888875445688999999998865   5677777899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.++|.+++++|+++|++|++++|+||+|.++.+++   ...++..+.+..+++++++||||.|++||+|+||+++   
T Consensus       167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~---  240 (378)
T PRK07682        167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE---AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA---  240 (378)
T ss_pred             cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC---CCCChhhcccccCCEEEEecCcccccChhhhhhhhhc---
Confidence            9999999999999999999999999999999998753   1222323333346899999999999999999999854   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++++.....    ....+++.++|.++..+|++..      .++++.++.++++++++.+.|+ +++    +.+..
T Consensus       241 ~~~~i~~l~~~~~----~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~~  305 (378)
T PRK07682        241 PVYFSEAMLKIHQ----YSMMCAPTMAQFAALEALRAGN------DDVIRMRDSYRKRRNFFVTSFN-EIG----LTCHV  305 (378)
T ss_pred             CHHHHHHHHHHHH----hhccCCCHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHH-HCC----CccCC
Confidence            7887776655322    2233567788888888887642      2356888899999999999999 876    46677


Q ss_pred             CCcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          353 RQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       353 ~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |++++|+|+.+     + .+++.++++++||.+.||.          |||++. +++++++++++|+++++..
T Consensus       306 p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        306 PGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             CCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence            88999999743     3 3456677766799999861          999987 8899999999999998764

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=2.3e-45  Score=356.36  Aligned_cols=354  Identities=14%  Similarity=0.173  Sum_probs=271.3

Q ss_pred             hhhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-----------CCCccCcCCcccHHHHHHHHHHhcCCCC
Q 015283           28 FKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-----------GENKEYLPIEGLAAFNKVTAELLFGADN   95 (410)
Q Consensus        28 ~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~aia~~~~~~~~   95 (410)
                      ++...+| +.|+|+.+++      +.+.+.+.+.+......           .....|++..|.++||+++++++.+.++
T Consensus        31 y~~~~~p~g~i~L~~~En------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~  104 (468)
T PLN02450         31 YDEIKNPSGIIQMGLAEN------QLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRG  104 (468)
T ss_pred             CCcccCCCeeEEeehhHh------HhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhC
Confidence            3333445 6899999987      43345555555443210           1224588888999999999999976655


Q ss_pred             --CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHHH
Q 015283           96 --SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus        96 --~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~  172 (410)
                        ..+++++|++  |+|+++++.+++  ...+.|||.|++++|+|+.|...+. ..|++++.+++.+++++.+|++.+++
T Consensus       105 ~~~~v~~~~Iii--t~Ga~~al~~l~--~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~  180 (468)
T PLN02450        105 NKVTFDPNKLVL--TAGATSANETLM--FCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEE  180 (468)
T ss_pred             CCCCcChHHeEE--ccChHHHHHHHH--HHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHH
Confidence              3468899999  999999999983  3446799999999999999988888 58999999998656778889999988


Q ss_pred             HHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-------
Q 015283          173 DIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-------  242 (410)
Q Consensus       173 ~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-------  242 (410)
                      .+.+.   ..++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+.+.  ...++.....       
T Consensus       181 ~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~  258 (468)
T PLN02450        181 AYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENT  258 (468)
T ss_pred             HHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccC
Confidence            87641   23567777889999999999999999999999999999999999998876431  1212222221       


Q ss_pred             -cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283          243 -RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME  321 (410)
Q Consensus       243 -~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~  321 (410)
                       ..+++++++||||.|+++|+|+||++  +.++.+.+.+..    ..  .+..++.++|.++..+|+++++.+   ++++
T Consensus       259 ~~~~~vi~l~S~SK~~~l~GlRiG~li--~~~~~l~~~~~~----~~--~~~~~s~~~Q~a~~~~L~~~~~~~---~~l~  327 (468)
T PLN02450        259 DVSNRVHIVYSLSKDLGLPGFRVGAIY--SNDEMVVSAATK----MS--SFGLVSSQTQYLLSALLSDKKFTK---NYLE  327 (468)
T ss_pred             CCCCcEEEEEeccccCCCCCccEEEEE--ECCHHHHHHHHH----Hh--hcCCCCHHHHHHHHHHhCCchhHH---HHHH
Confidence             24689999999999999999999984  444443443322    21  223467788999999999876532   2467


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------HHHHHHhhhcCcEEEcCCC-------
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------KAQSDNMTNKWHVYMTKDG-------  383 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~~g-------  383 (410)
                      +.+++++++++.+.+.|+ +.|    +.+.++++|+|+|+.+.           .+++.++++++||.+.||.       
T Consensus       328 ~~~~~l~~rr~~l~~~L~-~~g----i~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~  402 (468)
T PLN02450        328 ENQKRLKQRQKKLVSGLE-AAG----IKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEP  402 (468)
T ss_pred             HHHHHHHHHHHHHHHHHH-HcC----CcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCC
Confidence            788999999999999999 887    46778899999998752           2246677777899999972       


Q ss_pred             ---eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          384 ---RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 ---Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                         ||+++..+++++++++++|++++.+.
T Consensus       403 g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~  431 (468)
T PLN02450        403 GWFRVCFANMSEETLDLAMKRLKSFVESD  431 (468)
T ss_pred             CEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence               99999768899999999999988653

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=1.4e-45  Score=353.47  Aligned_cols=361  Identities=17%  Similarity=0.138  Sum_probs=279.4

Q ss_pred             CCCCCCCCCcccchhHhhhc---CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283           12 GVTMAPPDPILGVSEAFKAD---TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      ++...+++.+..+.+.+++.   .+.++|+|+.|+|    ..++ ++.+.+++.+.+..  ...|++..|.+++|+++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~   76 (396)
T PRK09147          4 RLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEP----KHPT-PAFIKDALAANLDG--LASYPTTAGLPALREAIAA   76 (396)
T ss_pred             hhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCC----CCCC-CHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHH
Confidence            45566666676666666533   3568999999997    3332 67888888776642  4779889999999999999


Q ss_pred             HhcCCCCCc-ccCC-ceEEEecCChhhHHHHHHHHHHHhCC---CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc
Q 015283           89 LLFGADNSV-LKEQ-RVATVQGLSGTGSLRLAAALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV  163 (410)
Q Consensus        89 ~~~~~~~~~-~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  163 (410)
                      ++.+.++.. ++++ +|++  |+|+++++.++..  ..+.+   ||.|++++|+|+.|...++..|++++.+|+.++++|
T Consensus        77 ~~~~~~g~~~~~~~~~i~i--t~G~~~al~~~~~--~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~  152 (396)
T PRK09147         77 WLERRYGLPALDPATQVLP--VNGSREALFAFAQ--TVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNF  152 (396)
T ss_pred             HHHHHhCCCcCCccceEEE--CCChHHHHHHHHH--HHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccC
Confidence            998777877 7775 8999  9999999998743  34678   899999999999999999999999999998655678


Q ss_pred             ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH--h
Q 015283          164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--A  241 (410)
Q Consensus       164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~  241 (410)
                      .+|++.+++.+.+   ++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++.......+...  .
T Consensus       153 ~~d~~~l~~~~~~---~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~  229 (396)
T PRK09147        153 APDFDAVPAEVWA---RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAEL  229 (396)
T ss_pred             ccCHHHHHHHHhh---ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhcccc
Confidence            9999999887764   5677778999999999999999999999999999999999999998865311111111111  1


Q ss_pred             --hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHH
Q 015283          242 --TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAE  319 (410)
Q Consensus       242 --~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~  319 (410)
                        ...+++++++||||.++++|+|+||++.   ++++++++.....    ....+++.+.|.++...+.+.       ++
T Consensus       230 ~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~---~~~l~~~~~~~~~----~~~~~~~~~~q~a~~~~~~~~-------~~  295 (396)
T PRK09147        230 GRDDFKRLVVFHSLSKRSNVPGLRSGFVAG---DAALLKKFLLYRT----YHGCAMPPAVQAASIAAWNDE-------AH  295 (396)
T ss_pred             CccccccEEEEeccccccCCccceeeeecC---CHHHHHHHHHHhh----hcccCCCHHHHHHHHHHhcch-------hH
Confidence              1246899999999999999999999744   7776666554322    122345667777766666532       34


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC--------------
Q 015283          320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD--------------  382 (410)
Q Consensus       320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~--------------  382 (410)
                      +++.++.++++++.+.+.|+ +.     +.+..|++|+|+|+.+.   .+++.++++++||.+.||              
T Consensus       296 ~~~~~~~~~~~~~~~~~~L~-~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~  369 (396)
T PRK09147        296 VRENRALYREKFDAVTPILA-PV-----LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGA  369 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-Hh-----cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCCCCCC
Confidence            57888999999999999988 64     24567889999999762   455678877789999775              


Q ss_pred             C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          383 G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       383 g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      +  ||+++. +++++++++++|+++++
T Consensus       370 ~~iRi~~~~-~~~~l~~~l~rl~~~~~  395 (396)
T PRK09147        370 GRVRIALVA-PLAECVEAAERIVDFCR  395 (396)
T ss_pred             CeEEEEecC-CHHHHHHHHHHHHHHhc
Confidence            1  999987 78899999999998874

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1e-45  Score=352.83  Aligned_cols=338  Identities=14%  Similarity=0.162  Sum_probs=266.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +++++|+.|.|    ..++ ++.+.++..+..... ...|++..|.+++|+++++++.+.++..+++++|++  |+|+++
T Consensus        29 ~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~i--t~G~~~  100 (384)
T PRK06348         29 PDIIDLSLGDP----DLIT-DESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMA--TVGACH  100 (384)
T ss_pred             CCcEEcCCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEE--cCChHH
Confidence            56899999987    3333 466666544433333 377999999999999999999877788888999999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.+++  ...+.+||+|++++|+|..|...++..|.+++.+++.+++++.+|++.+++.++.   +++++++++|||||
T Consensus       101 al~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NPt  175 (384)
T PRK06348        101 GMYLAL--QSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS---KTKAIILNSPNNPT  175 (384)
T ss_pred             HHHHHH--HHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc---CccEEEEeCCCCCC
Confidence            999984  3347799999999999999999999999999888875556788999999988864   55666778999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.++|.+++++|+++|++|+++||+||+|.++.+++   ...++..+....+++++++||||.+++||+|+||+++   +
T Consensus       176 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~---~  249 (384)
T PRK06348        176 GAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIA---P  249 (384)
T ss_pred             CcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecchhccCCccccceeeec---C
Confidence            999999999999999999999999999999998642   1222223222246899999999999999999999854   6


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++.+..    .......+++.++|.++..+|.+.      .+++++.++.++++++++.+.|+ .++.   +.+..+
T Consensus       250 ~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~r~~~~~~~L~-~~~~---~~~~~p  315 (384)
T PRK06348        250 DYIIETAKI----INEGICFSAPTISQRAAIYALKHR------DTIVPLIKEEFQKRLEYAYKRIE-SIPN---LSLHPP  315 (384)
T ss_pred             HHHHHHHHH----HHHhccCCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHh-cCCC---ceeccC
Confidence            775555443    322223356788888888777643      34456788889999999999998 7631   466788


Q ss_pred             CcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHH
Q 015283          354 QIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       354 ~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      ++|+|+|+.+     + .+++..+++++||.+.||.          ||+++. +++++++++++|+++
T Consensus       316 ~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~  382 (384)
T PRK06348        316 KGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRIEKM  382 (384)
T ss_pred             CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHHHhh
Confidence            8999999744     2 3456677777899999862          999975 889999999999865

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=1.9e-45  Score=351.42  Aligned_cols=340  Identities=18%  Similarity=0.149  Sum_probs=267.1

Q ss_pred             CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCC
Q 015283           32 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS  110 (410)
Q Consensus        32 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g  110 (410)
                      .++++++|+.|.+    ..+ .++.+.+++.+.+.......|++..|.+++|+++++++.+.++..++++ +|++  |+|
T Consensus        27 ~~~~~~~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~--t~G   99 (383)
T TIGR03540        27 EGVDVISLGIGDP----DLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLS--LIG   99 (383)
T ss_pred             cCCCeEEeCCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEE--CCC
Confidence            3468899999987    333 2678888887766443347798889999999999999987777777666 5888  899


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      +++++..+..  ..+.+||.|++++|+|+.|...++..|.+++.+++.+++++.+|++++++.+.+   +++++++++||
T Consensus       100 ~~~~l~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~---~~~~v~i~~P~  174 (383)
T TIGR03540       100 SKEGIAHIPL--AFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK---KAKLMFINYPN  174 (383)
T ss_pred             cHHHHHHHHH--HhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc---cceEEEEeCCC
Confidence            9999999843  336799999999999999999999999999999986555677899999888764   56777778999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||||.+++.+++++|+++|++||++||+||+|.++.+.+.  ...++..+....+++++++||||.||++|+|+||++. 
T Consensus       175 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-  251 (383)
T TIGR03540       175 NPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-  251 (383)
T ss_pred             CCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-
Confidence            9999999999999999999999999999999998876421  1222222222235789999999999999999999844 


Q ss_pred             eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                        ++++++++.....    ....+++...|.++..+|.+.      .+++++.++.++++++.+.+.|+ +.+    +.+
T Consensus       252 --~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~  314 (383)
T TIGR03540       252 --NADLIAGLGKVKT----NVDSGVFQAIQYAAIAALNGP------QDVVKEIRKIYQRRRDLLLEALK-KIG----IDV  314 (383)
T ss_pred             --CHHHHHHHHHHHH----hcccCCChHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHH-hCC----CEe
Confidence              7786666554322    222355667778877778764      23456778899999999999999 776    466


Q ss_pred             ccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHH
Q 015283          351 ILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       351 ~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      ..+.+++|+|+.+.     .++..++++++||.+.||        +  ||+++. +++++.+++++|++
T Consensus       315 ~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~  382 (383)
T TIGR03540       315 EKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK  382 (383)
T ss_pred             cCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence            77888999998652     445677777789999986        1  999975 78888888888764

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=2.3e-45  Score=352.20  Aligned_cols=366  Identities=16%  Similarity=0.145  Sum_probs=275.2

Q ss_pred             ccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia   87 (410)
                      |.++....++.+..+.+....  ..++++|+|+.|.|    ..++ ++.+.+++.+.+.......|++..|.+++|++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia   78 (405)
T PRK09148          4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNP----DLPT-PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQA   78 (405)
T ss_pred             hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCC----CCCC-CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHH
Confidence            444555555544444333321  23457899999987    3332 6778888777664433478998999999999999


Q ss_pred             HHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283           88 ELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD  166 (410)
Q Consensus        88 ~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  166 (410)
                      +++...+|..++++ +|++  |+|+++++.+++..  .+.+||+|++++|+|+.|...+...|.+++.+++.++..+   
T Consensus        79 ~~~~~~~g~~~~~~~~I~i--t~G~~~al~~~~~~--l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~---  151 (405)
T PRK09148         79 AYYARRFGVKLNPDTQVVA--TLGSKEGFANMAQA--ITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF---  151 (405)
T ss_pred             HHHHHHhCCCCCCCCcEEE--cCChHHHHHHHHHH--hcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC---
Confidence            99877667777787 8999  99999999998433  3679999999999999999999999999999998543333   


Q ss_pred             hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      ++++++.++...+++.++++++||||||.++|.+++++|+++|++|+++||+||+|.++.+++.  ...++..+....+.
T Consensus       152 ~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~~~s~~~~~~~~~~  229 (405)
T PRK09148        152 FPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN--PPPSVLQVPGAKDV  229 (405)
T ss_pred             ccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCC--CCCChhhCCCccCc
Confidence            3445555543334677888899999999999999999999999999999999999999886421  11122222122346


Q ss_pred             EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR  326 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~  326 (410)
                      +++++||||.+|+||+|+||++.   ++++++++....    .....+++.+.|.++..+|.+.      .+++++.++.
T Consensus       230 ~i~~~SfSK~~~~pGlR~G~~v~---~~~~i~~l~~~~----~~~~~~~~~~~q~~~~~~L~~~------~~~~~~~~~~  296 (405)
T PRK09148        230 TVEFTSMSKTFSMAGWRMGFAVG---NERLIAALTRVK----SYLDYGAFTPIQVAATAALNGP------QDCIAEMREL  296 (405)
T ss_pred             EEEEeccccccCCcchheeeeeC---CHHHHHHHHHHH----HHhccCCChHHHHHHHHHHhCc------HHHHHHHHHH
Confidence            88999999999999999999854   788666655432    2222345677888888888753      2446788899


Q ss_pred             HHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC--------HHHHHHhhhcCcEEEcCCC----------eEEec
Q 015283          327 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLA  388 (410)
Q Consensus       327 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ll~~~gi~v~~~g----------Ris~~  388 (410)
                      ++++++.+.+.|+ +.+    +.+..|++|+|+|+.+.        .+++..++++.||.+.||.          ||+++
T Consensus       297 ~~~~r~~l~~~L~-~~~----~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~  371 (405)
T PRK09148        297 YKKRRDVLVESFG-RAG----WDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV  371 (405)
T ss_pred             HHHHHHHHHHHHH-HcC----CccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec
Confidence            9999999999998 776    45667889999998652        3456777777899999961          99997


Q ss_pred             CCCcccHHHHHHHHHHHhhh
Q 015283          389 GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       389 ~~~~~~i~~~~~~l~~~l~~  408 (410)
                      . +.+++.+++++|.+++..
T Consensus       372 ~-~~~~l~~al~~l~~~l~~  390 (405)
T PRK09148        372 E-NEQRIRQAARNIKRFLSS  390 (405)
T ss_pred             C-CHHHHHHHHHHHHHHHHH
Confidence            5 889999999999998765

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=4.1e-45  Score=351.89  Aligned_cols=354  Identities=15%  Similarity=0.206  Sum_probs=275.9

Q ss_pred             HhhhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhc----------c-CCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283           27 AFKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE----------R-GENKEYLPIEGLAAFNKVTAELLFGAD   94 (410)
Q Consensus        27 ~~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~----------~-~~~~~y~~~~g~~~lr~aia~~~~~~~   94 (410)
                      .++...|| ++|+|+.+++      ..+.+.+.+.+.+...          . .+...|.+..|.++||+++|+++.+.+
T Consensus        39 ~~~~~~np~g~i~l~~aeN------~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~  112 (447)
T PLN02607         39 PYDESHNPSGVIQMGLAEN------QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIR  112 (447)
T ss_pred             CCCcccCCCceEEEechhh------hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhc
Confidence            34444566 6999999886      4445666666655432          1 122447788999999999999998766


Q ss_pred             C--CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHH
Q 015283           95 N--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus        95 ~--~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~  171 (410)
                      +  ..+++++|++  |+|++++++++..  ..+.|||.|+++.|+|+.|...+. ..|++++.+++...+++.+|++.++
T Consensus       113 ~~~~~v~p~~Ivi--t~G~t~al~~l~~--~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le  188 (447)
T PLN02607        113 GGKARFDPDRIVL--TAGATAANELLTF--ILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALE  188 (447)
T ss_pred             CCCCCcCHHHeEE--cCChHHHHHHHHH--HhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHH
Confidence            5  3578899999  9999999999843  336799999999999999988777 6799999998865567889999999


Q ss_pred             HHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh------
Q 015283          172 ADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------  242 (410)
Q Consensus       172 ~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------  242 (410)
                      +.+++.   +.++++++++|||||||.++|.+++++|+++|++|+++||+||+|..+.+.+  .+..++..+..      
T Consensus       189 ~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~--~~f~S~~s~~~~~~~~~  266 (447)
T PLN02607        189 AAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA--SEFVSVAEIVEARGYKG  266 (447)
T ss_pred             HHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCcccHHHHHhhcCCCC
Confidence            887641   3356777889999999999999999999999999999999999999877642  12223333221      


Q ss_pred             cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283          243 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       243 ~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~  322 (410)
                      ..+++++++||||.||++|+|+||+  ++.++++.+.+..    ..  .+..++.+.|.++..+|++.++.   .+++.+
T Consensus       267 ~~~~v~vi~s~SK~fg~~GlRvG~i--vs~n~~l~~~~~~----~~--~~~~~s~~~q~~~~~~L~d~~~~---~~~l~~  335 (447)
T PLN02607        267 VAERVHIVYSLSKDLGLPGFRVGTI--YSYNDKVVTTARR----MS--SFTLVSSQTQHLLASMLSDEEFT---ENYIRT  335 (447)
T ss_pred             CcCcEEEEEcchhcCCCCcceEEEE--EEcCHHHHHHHHH----Hh--hcCCCCHHHHHHHHHHhCCchhH---HHHHHH
Confidence            1458999999999999999999998  4456664443322    21  23356778899999999997764   245678


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCH-----------HHHHHhhhcCcEEEcCCC--------
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK-----------AQSDNMTNKWHVYMTKDG--------  383 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gi~v~~~g--------  383 (410)
                      .+++++++++.+.+.|+ +.|    +.+..+++|+|+|+++..           +++.++++++||.+.||.        
T Consensus       336 ~r~~l~~~~~~~~~~L~-~~g----i~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g  410 (447)
T PLN02607        336 NRERLRKRYEMIVQGLR-RAG----IECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPG  410 (447)
T ss_pred             HHHHHHHHHHHHHHHHH-hCC----CCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCC
Confidence            89999999999999999 877    467788999999997621           235577777899999972        


Q ss_pred             --eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          384 --RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       384 --Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                        ||+|+..+++++++++++|.+++++
T Consensus       411 ~fRi~fa~~~~~~l~~gl~Ri~~~l~~  437 (447)
T PLN02607        411 WFRVCFANMSEDTLEVALKRIHRFMDR  437 (447)
T ss_pred             EEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence              9999977899999999999999865

>PLN02231 alanine transaminase

Probab=100.00  E-value=6.9e-45  Score=355.84  Aligned_cols=355  Identities=15%  Similarity=0.134  Sum_probs=270.7

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      .+++|+++.|.+    .+   |..+++...+.+..  + ....|++..|.+++|+++++++.+.+|..+++++|++  |+
T Consensus       128 ~p~~i~~~~~~~----~f---p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T~  198 (534)
T PLN02231        128 HPSLLDKSETHG----LF---SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--TD  198 (534)
T ss_pred             CCccCCCCCccc----cC---CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--eC
Confidence            467888885543    33   34555444445432  2 2467999999999999999999888888899999999  99


Q ss_pred             ChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEE
Q 015283          110 SGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL  185 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii  185 (410)
                      |+++++.++..++  +. +||.|+++.|+|+.|...+...|.+++.+++.++++|++|++++++.+++.   ..++++++
T Consensus       199 Ga~~ai~~~~~~l--~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv  276 (534)
T PLN02231        199 GASPAVHMMMQLL--IRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV  276 (534)
T ss_pred             CHHHHHHHHHHHh--ccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence            9999999984333  54 799999999999999999999999999999865667999999999988652   12467777


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh------cCCcEEEEecccccc-c
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------RGMELLVAQSYSKNL-G  258 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~S~sK~~-~  258 (410)
                      ++|||||||.++|.+++++|+++|++||++||+||+|.++.+.+. ....++..+..      ...++++++||||.+ |
T Consensus       277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g  355 (534)
T PLN02231        277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG  355 (534)
T ss_pred             EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCccccc
Confidence            789999999999999999999999999999999999999987421 12223333321      122689999999975 8


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l  334 (410)
                      ++|+|+||+++...++++++++.+..    . ...+++..+|.++..+++..    .....+.++..++++.++++++.+
T Consensus       356 ~pGlRiGy~~~~~~~~~l~~~l~k~~----~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l  430 (534)
T PLN02231        356 ECGKRGGYMEVTGFTSDVREQIYKVA----S-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTL  430 (534)
T ss_pred             CCccceEEEEEecCCHHHHHHHHHHH----h-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999854333677666665432    1 22345566777777777642    122334445567788999999999


Q ss_pred             HHHhhhccCCCCCcccccCCcceeeecCC--CH---------------HHHHHhhhcCcEEEcCCC-----------eEE
Q 015283          335 FDSLSAKDKSGKDWSFILRQIGMFSFTGL--NK---------------AQSDNMTNKWHVYMTKDG-----------RIS  386 (410)
Q Consensus       335 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~---------------~~~~~ll~~~gi~v~~~g-----------Ris  386 (410)
                      .+.|+ ++.  + +.+.+|++++|+|+.+  ..               .++.+++++.||.++||.           |++
T Consensus       431 ~~~L~-~~~--g-i~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit  506 (534)
T PLN02231        431 EDALN-SLE--G-VTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT  506 (534)
T ss_pred             HHHHh-cCC--C-ceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE
Confidence            99998 772  1 5788899999999543  21               134668888899999972           899


Q ss_pred             ecCCCcccHHHHHHHHHHHhhhc
Q 015283          387 LAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       387 ~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++. +++++++++++|+++++++
T Consensus       507 ~~~-~~e~l~eal~RL~~~~~~~  528 (534)
T PLN02231        507 ILP-QEDKIPAIVSRLTEFHKSF  528 (534)
T ss_pred             eCC-CHHHHHHHHHHHHHHHHHH
Confidence            965 8899999999999987653

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=2.7e-45  Score=350.73  Aligned_cols=361  Identities=17%  Similarity=0.212  Sum_probs=280.0

Q ss_pred             cccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283            9 RFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      +.+++...+++.+..+.....+  ..++++++|+.|.+    ..+ .++.+.+++.+.+.... ..|++..|.+++|+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~i   76 (388)
T PRK07337          3 LAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEP----DFT-APEPVVEAAARALRRGV-TQYTSALGLAPLREAI   76 (388)
T ss_pred             hhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHH
Confidence            3455555565544444433332  23467899999987    332 26788888887765443 6798888999999999


Q ss_pred             HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283           87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD  166 (410)
Q Consensus        87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  166 (410)
                      ++++...++..+++++|++  |+|+++++.++..  ..+.+||+|++++|+|+.+...++..|++++.+++.+++++.+|
T Consensus        77 a~~~~~~~~~~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  152 (388)
T PRK07337         77 AAWYARRFGLDVAPERIVV--TAGASAALLLACL--ALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLT  152 (388)
T ss_pred             HHHHHHHhCCCCChHhEEE--ecCcHHHHHHHHH--HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCC
Confidence            9998877788788999999  9999999998743  34679999999999999999999999999999998545578899


Q ss_pred             hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      ++++++.+.+   +++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+.+.   ..+   .....++
T Consensus       153 ~~~l~~~~~~---~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~---~~~~~~~  223 (388)
T PRK07337        153 AADVEAAWGE---RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA---PVS---ALSLGDD  223 (388)
T ss_pred             HHHHHhhcCc---cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC---CcC---hhhccCC
Confidence            9999998864   667777899999999999999999999999999999999999999886421   111   1223467


Q ss_pred             EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR  326 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~  326 (410)
                      +++++||||.+|++|+|+||+++   ++++++++.....    ....+++...|.++..++.++..     +..++.++.
T Consensus       224 vi~~~S~SK~~~~~G~RiG~~~~---~~~l~~~l~~~~~----~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~  291 (388)
T PRK07337        224 VITINSFSKYFNMTGWRLGWLVV---PEALVGTFEKLAQ----NLFICASALAQHAALACFEPDTL-----AIYERRRAE  291 (388)
T ss_pred             EEEEEechhhcCCchhheeeeec---CHHHHHHHHHHHH----HhccCCChHHHHHHHHHhccCch-----HHHHHHHHH
Confidence            99999999999999999999854   6776565544322    22335677788888777765432     224677889


Q ss_pred             HHHHHHHHHHHhhhccCCCCCccc-ccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCC---------C--e
Q 015283          327 IKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKD---------G--R  384 (410)
Q Consensus       327 ~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~---------g--R  384 (410)
                      ++++++.+.+.|+ +.+    +.. ..|.+|+|+|+.+.          .+++.++++++||.+.||         +  |
T Consensus       292 ~~~~r~~~~~~L~-~~~----~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~R  366 (388)
T PRK07337        292 FKRRRDFIVPALE-SLG----FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIR  366 (388)
T ss_pred             HHHHHHHHHHHHH-hcC----CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEE
Confidence            9999999999998 776    232 46788999998652          245677787789999885         1  9


Q ss_pred             EEecCCCcccHHHHHHHHHHHh
Q 015283          385 ISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       385 is~~~~~~~~i~~~~~~l~~~l  406 (410)
                      |+++. +++++.+++++|.+++
T Consensus       367 i~~~~-~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        367 LSYAT-SMSRLEEAVARLGKLF  387 (388)
T ss_pred             EEecC-CHHHHHHHHHHHHHHh
Confidence            99987 7899999999998875

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=8.7e-45  Score=353.34  Aligned_cols=353  Identities=15%  Similarity=0.170  Sum_probs=267.1

Q ss_pred             CCC-CeeeeeeeeeecCCCcccccHHHHHHHHHh------hcc-CCCccCcCCcccHHHHHHHHHHhcCCCC--CcccCC
Q 015283           32 TDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLM------LER-GENKEYLPIEGLAAFNKVTAELLFGADN--SVLKEQ  101 (410)
Q Consensus        32 ~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~------~~~-~~~~~y~~~~g~~~lr~aia~~~~~~~~--~~~~~~  101 (410)
                      .+| ++|+|+.+++  ...+..+++.+++.....      +.. .....|.+..|.+++|+++++++.+.+|  ..++++
T Consensus        43 ~np~g~i~l~~aEN--~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe  120 (496)
T PLN02376         43 RNPHGIIQMGLAEN--QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE  120 (496)
T ss_pred             cCCCceEEeecchh--hhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh
Confidence            345 6899999886  111122233443332211      101 1225588889999999999999987766  567899


Q ss_pred             ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHHHHHhc---C
Q 015283          102 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA---A  177 (410)
Q Consensus       102 ~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~  177 (410)
                      +|++  |+|+++++++++  ...+.|||.|++++|+|+.|...+. ..|++++.+++..++++++|++.+++.+..   .
T Consensus       121 ~Ivi--t~Ga~~al~~l~--~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~  196 (496)
T PLN02376        121 RVVM--SGGATGANETIM--FCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQES  196 (496)
T ss_pred             hEEE--ccchHHHHHHHH--HHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhc
Confidence            9999  999999999984  3347799999999999999998887 689999999986556788999999766432   1


Q ss_pred             CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-------CCcEEEE
Q 015283          178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-------GMELLVA  250 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~  250 (410)
                      ..++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+.+  .+..++..+...       .+.++++
T Consensus       197 ~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~--~~~~si~~l~~~~~~~~~~~~~v~vv  274 (496)
T PLN02376        197 NKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG--GDFVSVAEVVNDVDISEVNVDLIHIV  274 (496)
T ss_pred             CCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC--CCcccHHHhhccccccccCCCeEEEE
Confidence            2356777789999999999999999999999999999999999999988643  222333333221       1356779


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +||||.||+||+|+||+  ++.++.+.+.+    ....  .....+.+.|.++..+|+++++.   .+++.+.+++++++
T Consensus       275 ~S~SK~~glpGlRvG~l--i~~~~~l~~~~----~~~~--~~~~vs~~~Q~a~~~~L~d~~~~---~~~l~~~r~~l~~r  343 (496)
T PLN02376        275 YSLSKDMGLPGFRVGIV--YSFNDSVVSCA----RKMS--SFGLVSSQTQLMLASMLSDDQFV---DNFLMESSRRLGIR  343 (496)
T ss_pred             EeccccCCCCcceEEEE--EECCHHHHHHH----HHHh--hcCCCCHHHHHHHHHHhCChhHH---HHHHHHHHHHHHHH
Confidence            99999999999999998  44455533332    2211  22346788899999999987653   45567889999999


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCCC------------HHHHHHhhhcCcEEEcCCC----------eEEec
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG----------RISLA  388 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ll~~~gi~v~~~g----------Ris~~  388 (410)
                      ++.+.+.|+ +.+    +.+..+.+|+|+|+++.            .+++..++++.||.+.||.          ||+++
T Consensus       344 ~~~l~~~L~-~~g----i~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa  418 (496)
T PLN02376        344 HKVFTTGIK-KAD----IACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFA  418 (496)
T ss_pred             HHHHHHHHH-HCC----CcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEee
Confidence            999999998 776    46777899999999762            2345567777899999972          99999


Q ss_pred             CCCcccHHHHHHHHHHHhhh
Q 015283          389 GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       389 ~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ..+++++++++++|++++.+
T Consensus       419 ~~~~~~l~~al~rl~~~l~~  438 (496)
T PLN02376        419 NMDDDTLHVALGRIQDFVSK  438 (496)
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence            76889999999999998853

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=6.5e-45  Score=349.47  Aligned_cols=366  Identities=13%  Similarity=0.161  Sum_probs=280.9

Q ss_pred             CCcccchhHhhhcCC--CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCC
Q 015283           19 DPILGVSEAFKADTD--EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS   96 (410)
Q Consensus        19 ~~~~~~~~~~~~~~~--~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~   96 (410)
                      +++.++.+.++.+..  .++++|+.|.| +..+....++.+.+++.+.+.......|.+..|.+++|+++++++.+. +.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~   91 (401)
T TIGR01264        14 NPIRAIVDNMKVKPNPEKPMIKLSIGDP-TVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DG   91 (401)
T ss_pred             hHHHHHHHHHHhhhhcCCCeeecCCCCC-CCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CC
Confidence            445566666666543  46799999998 322222336888888888765543367989999999999999998753 55


Q ss_pred             cccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283           97 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA  176 (410)
Q Consensus        97 ~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~  176 (410)
                      .+++++|++  |+|+++++.++..  ..+.+||+|++++|+|..|...++..|.+++.+++..++++++|++.+++.+++
T Consensus        92 ~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~  167 (401)
T TIGR01264        92 PIEADDVVL--CSGCSHAIEMCIA--ALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE  167 (401)
T ss_pred             CCCHHHEEE--CcChHHHHHHHHH--HhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc
Confidence            677899999  9999999999843  336799999999999999999999999999999885455688999999988865


Q ss_pred             CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283          177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN  256 (410)
Q Consensus       177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  256 (410)
                         ++.++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+.+.  ...++..+. ...++++++||||.
T Consensus       168 ---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~vi~~~SfSK~  241 (401)
T TIGR01264       168 ---KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA--TFEPLASLS-STVPILSCGGLAKR  241 (401)
T ss_pred             ---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--ccccHHHcC-CCCcEEEEccCccc
Confidence               456777899999999999999999999999999999999999999986431  222332322 22358999999999


Q ss_pred             ccccCCCcceEEEEeCCc-hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          257 LGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       257 ~~~~G~r~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      |+++|+|+||+++  .++ .....+...+..... ...+++.+.|.++..+|.+. .    .+++++.++.++++++.+.
T Consensus       242 ~~~~GlRiG~iv~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-~----~~~l~~~~~~~~~~r~~l~  313 (401)
T TIGR01264       242 WLVPGWRLGWIII--HDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT-P----QEYFDGTLSVLESNAMLCY  313 (401)
T ss_pred             CCCccceEEEEEe--cCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC-c----HHHHHHHHHHHHHHHHHHH
Confidence            9999999999854  321 222334343433322 22356777888888888652 1    3456788899999999999


Q ss_pred             HHhhhccCCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHH
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEY  397 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~  397 (410)
                      +.|+ +++  + +.+..|++|+|+|+.+.          .+++.++++++||.+.||.        ||+++. +++++++
T Consensus       314 ~~L~-~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~  388 (401)
T TIGR01264       314 GALA-AVP--G-LRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEE  388 (401)
T ss_pred             HHHH-hCC--C-CcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHH
Confidence            9998 773  1 46667889999998742          3456777767899999873        999987 7899999


Q ss_pred             HHHHHHHHhhhc
Q 015283          398 LADAIIDSYHNV  409 (410)
Q Consensus       398 ~~~~l~~~l~~~  409 (410)
                      ++++|.+.++++
T Consensus       389 ~l~rl~~~~~~~  400 (401)
T TIGR01264       389 ACSRIQEFCERH  400 (401)
T ss_pred             HHHHHHHHHhcc
Confidence            999999998764

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.2e-45  Score=349.88  Aligned_cols=344  Identities=18%  Similarity=0.181  Sum_probs=275.8

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ++++++|+.|.|    ..+ .++.+.+++.+.+.... .+|.+..|.+++|+++++++.+.++..+++++|++  |+|++
T Consensus        32 ~~~~i~l~~g~p----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G~~  103 (402)
T PRK06107         32 GRSIVDLTVGEP----DFD-TPDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITV--GGGAK  103 (402)
T ss_pred             cCCEEEcCCCCC----CCC-CCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCCHH
Confidence            467899999998    333 26788888888775443 67999999999999999998877788788899999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++..+.  ...+.+||.|++++|+|..|...+...+.+++.+++.+++++.+|++.+++.+.+   +++++++++|+||
T Consensus       104 ~al~~~~--~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP  178 (402)
T PRK06107        104 QAIFLAL--MATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP---RTRWLILNAPSNP  178 (402)
T ss_pred             HHHHHHH--HHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc---CceEEEEECCCCC
Confidence            9999984  3447799999999999999998888888888888874455678999999988864   5666777899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHc-CCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEEE
Q 015283          193 TGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||.++|.+++++++++|+++ ++++|+||+|.++.+.+.  ...++..+.. ..+++++++||||.|++||+|+||++. 
T Consensus       179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~-  255 (402)
T PRK06107        179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG-  255 (402)
T ss_pred             CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-
Confidence            99999999999999999998 999999999998876431  1222323222 235899999999999999999999854 


Q ss_pred             eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                        ++++++.+....    .....+++.+.|.++..+|.+.      .+++++.++.++++++.+.+.|+ +.+.   +.+
T Consensus       256 --~~~~~~~~~~~~----~~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~g---~~~  319 (402)
T PRK06107        256 --PADLIAAINKLQ----SQSSSCPSSISQAAAAAALNGD------QSFVTESVAVYKQRRDYALALLN-AIPG---LSC  319 (402)
T ss_pred             --CHHHHHHHHHHH----HhcccCCChHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHHHHHHHh-cCCC---Ccc
Confidence              777666554432    2233467888899998888643      23457888899999999999998 7631   567


Q ss_pred             ccCCcceeeecCC---------------C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHh
Q 015283          351 ILRQIGMFSFTGL---------------N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       351 ~~~~~~~~~~~~~---------------~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      .++.+|+|+|+.+               + .+++.++++++||.+.||.        ||+++. +++++++++++|++++
T Consensus       320 ~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~~~l  398 (402)
T PRK06107        320 LVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACARIERAV  398 (402)
T ss_pred             cCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHH
Confidence            7889999999754               1 2456788888899999983        999997 8999999999999998


Q ss_pred             hhc
Q 015283          407 HNV  409 (410)
Q Consensus       407 ~~~  409 (410)
                      +++
T Consensus       399 ~~~  401 (402)
T PRK06107        399 AAL  401 (402)
T ss_pred             Hhc
Confidence            764

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.6e-45  Score=347.89  Aligned_cols=341  Identities=15%  Similarity=0.125  Sum_probs=268.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc-ccCC-ceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQ-RVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~-~~~~-~i~~~~t~gg  111 (410)
                      .++|+|+.|.+    ... .++.+.+++.+.+.......|+ ..|.+++|+++++++...+|.. ++++ +|++  |+|+
T Consensus        44 ~~~i~L~~g~p----~~~-~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i--t~Gs  115 (410)
T PRK06290         44 MELIDMGVGEP----DEM-ADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIH--SIGS  115 (410)
T ss_pred             CCeEEcCCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEE--ccCH
Confidence            36899999997    322 2577888877655433335685 5899999999999997777776 7786 7999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++..+..  ..+.+||.|++++|+|+.|...++..|++++.+++.++.++.+|++.+++.+.+   +++++++++|||
T Consensus       116 ~~al~~~~~--~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~nP~N  190 (410)
T PRK06290        116 KPALAMLPS--CFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE---KAKLLYLNYPNN  190 (410)
T ss_pred             HHHHHHHHH--HhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc---cceEEEEECCCC
Confidence            999998743  336799999999999999999999999999999986555688899999888864   567788789999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.++|.+++++|+++|++|+++||+||+|.++.+++.   ..++..+....+++|+++||||.+|++|+|+||++.  
T Consensus       191 PTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~---~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~--  265 (410)
T PRK06290        191 PTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK---PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG--  265 (410)
T ss_pred             CCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC---CcChhcCCCccccEEEEeechhhcCCchhheEeEEe--
Confidence            999999999999999999999999999999999876421   112222222335789999999999999999999854  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++.+....    .....+++.++|.++..+|.+.++       +++.+++++++++.+.+.|+ +.|    +.+.
T Consensus       266 -~~~l~~~l~~~~----~~~~~~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g----~~~~  328 (410)
T PRK06290        266 -NELIVKAFATVK----DNNDSGQFIAIQKAGIYALDHPEI-------TEKIREKYSRRLDKLVKILN-EVG----FKAE  328 (410)
T ss_pred             -CHHHHHHHHHHH----hccccCCcHHHHHHHHHHhhCcHH-------HHHHHHHHHHHHHHHHHHHH-hCC----Ceec
Confidence             778666554432    222335566788888888876532       46778889999999999998 876    4667


Q ss_pred             cCCcceeeecCCC------------HHHHHHhhhcCcEEEcCCC------eEEecC--CCcccHHHHHHHHHHHhhhc
Q 015283          352 LRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG------RISLAG--LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       352 ~~~~~~~~~~~~~------------~~~~~~ll~~~gi~v~~~g------Ris~~~--~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++++++|+|+.+.            .++++.|+++.++.+.|+.      ||+++.  .++++.+++++.|++.|..+
T Consensus       329 ~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~  406 (410)
T PRK06290        329 MPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV  406 (410)
T ss_pred             CCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence            7889999997542            2457788887677777752      999984  27889999999999988654

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-44  Score=317.53  Aligned_cols=366  Identities=15%  Similarity=0.139  Sum_probs=297.4

Q ss_pred             CCcccchhHhhhc--CC--CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283           19 DPILGVSEAFKAD--TD--EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD   94 (410)
Q Consensus        19 ~~~~~~~~~~~~~--~~--~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~   94 (410)
                      .++..+...+...  ++  +++|.|+.|+| +..+.-...+.+.+|+.+.+.++..++|.|..|....|+++|+|+.+..
T Consensus        42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDP-sv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l  120 (447)
T KOG0259|consen   42 VTIRGILSALFDCCDPEKKKPILPLGHGDP-SVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDL  120 (447)
T ss_pred             ccHHHHHHHHhhcCCcccCceeccCCCCCC-CccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCC
Confidence            4455555444432  22  37899999999 4444444578999999999988777999999999999999999987777


Q ss_pred             CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283           95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI  174 (410)
Q Consensus        95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i  174 (410)
                      ...+++++|.+  |+|.++|++++...+  -.||..|++|.|+|+-|...+...|.+++.+.+.++++|.+|++.+++++
T Consensus       121 ~~kl~a~DV~l--tsGC~qAIe~~i~~L--A~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~  196 (447)
T KOG0259|consen  121 PNKLTADDVVL--TSGCSQAIELAISSL--ANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALA  196 (447)
T ss_pred             CCccCcCceEE--eccchHHHHHHHHHh--cCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhh
Confidence            77788999999  999999999984333  56999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc
Q 015283          175 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS  254 (410)
Q Consensus       175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  254 (410)
                      .+   +|+++++.||+||+|.++|.+.|++|+++|++++++||.||+|.++.|++  .+..+...+. .---+++++|.|
T Consensus       197 DE---NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~fs-siVPVitlggis  270 (447)
T KOG0259|consen  197 DE---NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKFS-SIVPVITLGGIS  270 (447)
T ss_pred             cc---CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhcc-ccCceEeecccc
Confidence            87   89999999999999999999999999999999999999999999999864  3343333332 223789999999


Q ss_pred             ccccccCCCcceEEEEeCCch-hHH--HHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          255 KNLGLYAERIGAMNVVCSSSD-LAA--RVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       255 K~~~~~G~r~G~l~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      |-|-.||||+||++  ..++. +..  ++.+.+.+... ...+|+.+.|.|+-.+|....     ++.+......++.+.
T Consensus       271 KrW~VPGWRlGWi~--~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp-----~efF~k~~~~lk~na  342 (447)
T KOG0259|consen  271 KRWIVPGWRLGWIA--LHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTP-----EEFFDKKLSFLKSNA  342 (447)
T ss_pred             cccccCCceeeeEE--EecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhCh-----HHHHHHHHHHHHhhH
Confidence            99999999999994  33433 211  11123333322 356788999999888887542     455678889999999


Q ss_pred             HHHHHHhhhccCCCCCcc-cccCCcceeeecCC----------CHHHHHHhhhcCcEEEcCCC--------eEEecCCCc
Q 015283          332 QKLFDSLSAKDKSGKDWS-FILRQIGMFSFTGL----------NKAQSDNMTNKWHVYMTKDG--------RISLAGLSL  392 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~  392 (410)
                      +...+.|+ +++.   +. ...|.+.+|+|+++          +-+++.+|.+|..+++.||.        |+++.. +.
T Consensus       343 ~l~y~~Lk-~IP~---l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~  417 (447)
T KOG0259|consen  343 DLCYSRLK-DIPC---LTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EE  417 (447)
T ss_pred             HHHHHHHh-cCCC---cccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-Ch
Confidence            99999999 8863   44 67899999999865          45688999999999999983        999976 88


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      +.++++++||++...+
T Consensus       418 ~~leea~~Rik~Fc~R  433 (447)
T KOG0259|consen  418 EMLEEAFSRIKEFCDR  433 (447)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999988654

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-44  Score=346.07  Aligned_cols=366  Identities=18%  Similarity=0.200  Sum_probs=279.1

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      .++++..++..+..+......  .+++++|+.|.+    ..+ +++.+.+++.+.........|.+..|.+++|++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~g~~----~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~   77 (389)
T PRK05957          5 TSRMDAVQSPIIPVVGQLIRE--NPGTISLGQGVV----SYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQK   77 (389)
T ss_pred             hHHHHhcCCcHHHHHHHHHHh--CCCeEEccCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Confidence            344544454433222223322  256899999997    333 3688888888776443336798899999999999999


Q ss_pred             hcCCCCCccc-CCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283           90 LFGADNSVLK-EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE  168 (410)
Q Consensus        90 ~~~~~~~~~~-~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  168 (410)
                      +....+..++ +++|++  |+|+++++..+.  ...+.+||.|++++|+|..+...++..|++++.++.  ++++.+|++
T Consensus        78 l~~~~g~~~~~~~~i~~--t~G~~~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~  151 (389)
T PRK05957         78 LQQDNGIELNNEQAIVV--TAGSNMAFMNAI--LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT--DDNYQLQPE  151 (389)
T ss_pred             HHHHhCCCCCCCCeEEE--eCChHHHHHHHH--HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec--CCCCCcCHH
Confidence            8777777666 678999  999999998873  334679999999999999998888999999999987  456789999


Q ss_pred             hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283          169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL  248 (410)
Q Consensus       169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i  248 (410)
                      ++++.+++   +++++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+..  ..+.....+...+++
T Consensus       152 ~l~~~i~~---~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~--~~~~~~~~~~~~~~i  226 (389)
T PRK05957        152 AIEQAITP---KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVK--HFSPGSIPGSGNHTI  226 (389)
T ss_pred             HHHHhcCc---CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCC--ccChhhCCCccCcEE
Confidence            99998865   5777778999999999999999999999999999999999999999865311  112222223446899


Q ss_pred             EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +++||||.+|++|+|+||+++   ++++++++....    .....+++...|.++...|.++.      +++++.+++++
T Consensus       227 ~~~S~SK~~g~~GlRiG~~~~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~  293 (389)
T PRK05957        227 SLYSLSKAYGFASWRIGYMVI---PIHLLEAIKKIQ----DTILICPPVVSQYAALGALQVGK------SYCQQHLPEIA  293 (389)
T ss_pred             EEecchhhccCccceeEEEec---CHHHHHHHHHHH----hhcccCCCcHHHHHHHHHHhCCh------HHHHHHHHHHH
Confidence            999999999999999999854   777666655432    22234567788888888887642      22356667789


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcc
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLA  393 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~  393 (410)
                      ++++.+.+.|+ +++.  .+.+.++++++|+|+.+    + .++++++++++||.+.||.          ||+++..+++
T Consensus       294 ~~r~~l~~~L~-~~~~--~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~  370 (389)
T PRK05957        294 QVRQILLKSLG-QLQD--RCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKA  370 (389)
T ss_pred             HHHHHHHHHHH-hcCC--CccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHH
Confidence            99999999998 7641  12556788899998754    3 3567788777899999961          9999876889


Q ss_pred             cHHHHHHHHHHHhhhc
Q 015283          394 KCEYLADAIIDSYHNV  409 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++|.+.++++
T Consensus       371 ~l~~~~~~l~~~~~~~  386 (389)
T PRK05957        371 TAKEGIERLVQGLKTI  386 (389)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999988764

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.8e-45  Score=347.25  Aligned_cols=340  Identities=17%  Similarity=0.170  Sum_probs=262.4

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCc-eEEEecCCh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLSG  111 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~-i~~~~t~gg  111 (410)
                      ++++++|+.|.|    ..+ .++.+.+++.+.+.......|++..|.++||+++++++...++..+++++ |++  |+|+
T Consensus        34 g~~~i~l~~g~p----~~~-~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v--t~G~  106 (394)
T PRK05942         34 GLDLIDLGMGNP----DGA-APQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP--LLGS  106 (394)
T ss_pred             CCCeEEcCCCCC----CCC-CCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE--ccCh
Confidence            356899999987    222 25556666555543332377998999999999999998776677777874 888  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++..+.  ...+.+||+|++++|+|+.+...+...|++++.+++..+++|.+|++++++.+.+   +++++++++|||
T Consensus       107 ~~al~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~~P~N  181 (394)
T PRK05942        107 KEGLTHLA--LAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ---QAKILYFNYPSN  181 (394)
T ss_pred             HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc---cceEEEEcCCCC
Confidence            99999984  3347799999999999999998888999999999985455678999999988864   677888899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.++|.+++++|+++|+++|++||+||+|.++.+.+.  ...++..+....+.+++++||||.||++|+|+||+++  
T Consensus       182 PtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~--  257 (394)
T PRK05942        182 PTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG--  257 (394)
T ss_pred             CCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCCccccEEEEecchhccCChhhheeeeec--
Confidence            999999999999999999999999999999998886421  1122222222234678999999999999999999854  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++++.....    ....+++..+|.++..+|+..      .+++++.+++++++++++.+.|+ +.+    +.+.
T Consensus       258 -~~~l~~~l~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~  321 (394)
T PRK05942        258 -NRHIIQGLRTLKT----NLDYGIFSALQKAAETALQLP------DSYLQQVQERYRTRRDFLIQGLG-ELG----WNIP  321 (394)
T ss_pred             -CHHHHHHHHHHHh----hcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Ceec
Confidence             7786666554322    222345667778777777532      34567888999999999999998 776    4667


Q ss_pred             cCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHH
Q 015283          352 LRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       352 ~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      .+++++|+|+.+    + .+++.++++++||.+.||.          ||+++. +.+.+.+++++|+++
T Consensus       322 ~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~  389 (394)
T PRK05942        322 PTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA  389 (394)
T ss_pred             CCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence            788999999865    2 3456678877899998851          999975 667777777777664

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1e-44  Score=346.61  Aligned_cols=342  Identities=18%  Similarity=0.191  Sum_probs=273.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +++++|+.|++    ..++ ++.+.+++.+.+.... ..|++..|.+++|+++++++.+.++..+++++|++  |+|+++
T Consensus        24 ~~~i~l~~g~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~~   95 (382)
T PRK06108         24 EGVLPLWFGES----DLPT-PDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSGVQ   95 (382)
T ss_pred             CCeEEecCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCChHH
Confidence            57899999998    3333 6889998888775543 56988899999999999998777777788899999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++..+..  ..+.+||+|++++|+|+.+...++..|++++.+++..+ ++|.+|++.+++.+.+   +++++++++|+||
T Consensus        96 al~~~~~--~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~i~l~~p~NP  170 (382)
T PRK06108         96 ALMLAAQ--ALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP---RTRALFINSPNNP  170 (382)
T ss_pred             HHHHHHH--HhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc---cceEEEEECCCCC
Confidence            9998743  33679999999999999999999999999999998542 4577999999988864   5677777899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|+++|+++|+||+|.++.+++ .....++..+....+++++++||||.||++|+|+||+++   
T Consensus       171 tG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~---  246 (382)
T PRK06108        171 TGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA---  246 (382)
T ss_pred             CCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC---
Confidence            9999999999999999999999999999999998641 111222222233346899999999999999999999855   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++++....    ...+.+++.+.|.++...|.+.      .+++++.+++++++++.+.+.|+ +...   +.+..
T Consensus       247 ~~~~~~~~~~~~----~~~~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~  312 (382)
T PRK06108        247 PPALGQVLEKLI----EYNTSCVAQFVQRAAVAALDEG------EDFVAELVARLRRSRDHLVDALR-ALPG---VEVAK  312 (382)
T ss_pred             CHHHHHHHHHHH----HhcccCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hCCC---CcccC
Confidence            777666655432    2234467788888888888754      23456788889999999999998 7631   56777


Q ss_pred             CCcceeeecCC----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          353 RQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       353 ~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      +++++|+|+.+    + .+++.++++++||.+.||        +  |||++. +++++++++++|+++++
T Consensus       313 p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        313 PDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA  381 (382)
T ss_pred             CCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence            88999999865    2 356777877789999885        1  999998 99999999999999875

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=2.4e-44  Score=346.20  Aligned_cols=363  Identities=15%  Similarity=0.163  Sum_probs=275.4

Q ss_pred             chhHhhh-cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC------CC
Q 015283           24 VSEAFKA-DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD------NS   96 (410)
Q Consensus        24 ~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~------~~   96 (410)
                      ..+.+.. ..++++|+|+.|.| +....-.+++.+.+++.+.+.......|++..|.++||+++++++...+      +.
T Consensus        22 ~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~  100 (412)
T PTZ00433         22 VTDNAKPSPSPKSIIKLSVGDP-TLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKS  100 (412)
T ss_pred             HHHhhccCCCCCCeeecCCcCC-CCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccC
Confidence            3344444 34568999999998 2111012368888888887654334779888899999999999987543      45


Q ss_pred             cccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283           97 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA  176 (410)
Q Consensus        97 ~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~  176 (410)
                      .+++++|++  |+|+++++.++..  ..+.+||+|++++|+|..|...++..|++++.+++.+++++++|++++++.+++
T Consensus       101 ~~~~~~i~i--t~G~~~al~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~  176 (412)
T PTZ00433        101 TIKKDNVVL--CSGVSHAILMALT--ALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD  176 (412)
T ss_pred             CCChhhEEE--eCChHHHHHHHHH--HhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc
Confidence            678899999  9999999999843  346799999999999999999999999999999986556789999999988765


Q ss_pred             CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283          177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN  256 (410)
Q Consensus       177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  256 (410)
                         ++.++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+.+.  ...++..+. ...++++++||||.
T Consensus       177 ---~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~~i~~~SfSK~  250 (412)
T PTZ00433        177 ---RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA--TFTSVADFD-TTVPRVILGGTAKN  250 (412)
T ss_pred             ---CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC--Cccchhhcc-CCCceEEEccchhh
Confidence               567777899999999999999999999999999999999999999886421  112222222 22358999999999


Q ss_pred             ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          257 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       257 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      ||+||+|+||+++ ..++...+.+...+..... ...+++.+.|.++..+|.+. .    .+++++.++.++++++.+.+
T Consensus       251 ~~~pGlRlG~~i~-~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-~----~~~~~~~~~~~~~~r~~l~~  323 (412)
T PTZ00433        251 LVVPGWRLGWLLL-VDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNT-P----QEHLEQIVAKLEEGAMVLYN  323 (412)
T ss_pred             cCCCCeeEEEEEE-eCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcC-c----HHHHHHHHHHHHHHHHHHHH
Confidence            9999999999843 1121111223333333222 22357778888887777653 1    34567888999999999999


Q ss_pred             HhhhccCCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHH
Q 015283          337 SLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYL  398 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~  398 (410)
                      .|+ +...   +.+..|++|+|+|+.+.          .++++.+++++||.+.||.        ||+++. .+++++++
T Consensus       324 ~L~-~~~~---~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~a  398 (412)
T PTZ00433        324 HIG-ECIG---LSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREA  398 (412)
T ss_pred             HHh-cCCC---CcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHH
Confidence            998 6521   46678889999997542          3457788776799999973        999987 78899999


Q ss_pred             HHHHHHHhhhc
Q 015283          399 ADAIIDSYHNV  409 (410)
Q Consensus       399 ~~~l~~~l~~~  409 (410)
                      +++|.+++++.
T Consensus       399 l~~l~~~~~~~  409 (412)
T PTZ00433        399 VERIKAFCERH  409 (412)
T ss_pred             HHHHHHHHHHh
Confidence            99999988754

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=6.5e-45  Score=347.12  Aligned_cols=336  Identities=15%  Similarity=0.172  Sum_probs=266.6

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-CceEEEecCCh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSG  111 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~gg  111 (410)
                      .+++|+|+.|.+    ..++ ++.+.+++.+...... ..|+|..|.+++|+++++++...+|..+++ ++|++  |+|+
T Consensus        28 ~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~i--t~g~   99 (384)
T PRK12414         28 QHDALNLSQGAP----NFAP-DPALVEGVARAMRDGH-NQYAPMAGIAALREALAEKTERLYGARYDPASEVTV--IASA   99 (384)
T ss_pred             hCCeEEcCCCCC----CCCC-CHHHHHHHHHHHHhCC-CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ECCh
Confidence            357899999997    3332 6888888877665443 779999999999999999987777776655 57998  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++..++  ...+.+||+|++++|+|..+...++..|.+++.+++. .+++.+|++.+++.+++   +++++++++|||
T Consensus       100 ~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~---~~~~v~i~~p~N  173 (384)
T PRK12414        100 SEGLYAAI--SALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLS-PEDFRVNWDEVAAAITP---RTRMIIVNTPHN  173 (384)
T ss_pred             HHHHHHHH--HHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecC-ccccccCHHHHHhhcCc---ccEEEEEcCCCC
Confidence            99999873  3447799999999999999999999999999999874 34578999999988864   567777899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.++|.+++++|+++|++||+++|+||+|.++.+++..  ..++.......+++++++||||.||+||+|+||+++  
T Consensus       174 PTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~--~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~--  249 (384)
T PRK12414        174 PSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGAR--HHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLA--  249 (384)
T ss_pred             CCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCC--ccCcccCcCccCcEEEEecccccccCccceEEEEec--
Confidence            9999999999999999999999999999999998864311  112222222245899999999999999999999855  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++.+....    .....+++.+.|.++..+|.++..       ..+.++.++++++.+.+.|+ +.|    +.+.
T Consensus       250 -~~~l~~~l~~~~----~~~~~~~s~~~q~a~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~g----~~~~  312 (384)
T PRK12414        250 -PAELMDEIRKVH----QFMVFSADTPMQHAFAEALAEPAS-------YLGLGAFYQRKRDLLARELA-GSR----FELL  312 (384)
T ss_pred             -CHHHHHHHHHHH----hheecCCCcHHHHHHHHHhcCChH-------HHHHHHHHHHHHHHHHHHHH-hCC----Ceec
Confidence             777666654432    222335677888888888877532       13567788999999999998 776    4677


Q ss_pred             cCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC------------eEEecCCCcccHHHHHHHHHH
Q 015283          352 LRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG------------RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       352 ~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g------------Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      ++.+++|+|+.+       +.+++.++++++||.+.||.            ||+++. +++++++++++|++
T Consensus       313 ~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~  383 (384)
T PRK12414        313 PSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS  383 (384)
T ss_pred             CCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence            888999999743       24567677777899999851            999997 88999999999875

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=3e-44  Score=343.92  Aligned_cols=358  Identities=16%  Similarity=0.132  Sum_probs=273.2

Q ss_pred             CCCCCCCCcccchhHhhhc---CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           13 VTMAPPDPILGVSEAFKAD---TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      +...+++.+..+.+.+.+.   .+.+.++|+.|+|    ..+ +++.+.+++.+... . ...|++..|.+++|++++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~-~~~~~~~a~~~~~~-~-~~~Y~~~~G~~~lr~aia~~   76 (393)
T TIGR03538         4 LSRLQPYPFEKLAALLAGVTPPASKPPIALSIGEP----KHP-TPAFVLEALRENLH-G-LSTYPTTKGLPELRQAIARW   76 (393)
T ss_pred             hhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCC----CCC-CCHHHHHHHHHHhh-c-cCCCCCCCCCHHHHHHHHHH
Confidence            3344555555555555433   3468899999998    332 26888888887664 2 47799999999999999999


Q ss_pred             hcCCCCCc--ccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCE--EEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283           90 LFGADNSV--LKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAK--VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG  164 (410)
Q Consensus        90 ~~~~~~~~--~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~  164 (410)
                      +.+.++..  ++++ +|++  |+|+++++.++..  ..+.+||+  |++++|+|+.|...+...|.+++.+++.+++++.
T Consensus        77 ~~~~~~~~~~~~~~~~i~i--t~Ga~~al~~~~~--~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~  152 (393)
T TIGR03538        77 LERRFDLPTGVDPERHVLP--VNGTREALFAFAQ--AVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFL  152 (393)
T ss_pred             HHHhhCCcccCCCCceEEE--CCCcHHHHHHHHH--HHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCC
Confidence            97776665  6775 7988  9999999999843  33679986  9999999999999999999999999986556688


Q ss_pred             cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh---
Q 015283          165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA---  241 (410)
Q Consensus       165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~---  241 (410)
                      +|++++++.+.+   +++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++............   
T Consensus       153 ~d~~~l~~~~~~---~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~  229 (393)
T TIGR03538       153 PDFDAVPESVWR---RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLG  229 (393)
T ss_pred             CCHHHHHHHHhh---cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhccccc
Confidence            999999988765   56677778999999999999999999999999999999999999987642101111111111   


Q ss_pred             -hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283          242 -TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM  320 (410)
Q Consensus       242 -~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  320 (410)
                       ...+++++++||||.|+++|+|+||++.   ++++++++.....    ....+++...|.++...+.+.       +++
T Consensus       230 ~~~~~~vi~i~S~SK~~~~~GlRvG~~i~---~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~-------~~~  295 (393)
T TIGR03538       230 RDDFRRCLVFHSLSKRSNLPGLRSGFVAG---DAEILKAFLRYRT----YHGCAMPIPTQLASIAAWNDE-------QHV  295 (393)
T ss_pred             ccccccEEEEecchhhcCCcccceEEEec---CHHHHHHHHHHHH----hhccCcCHHHHHHHHHHhcCh-------HHH
Confidence             1346899999999999999999999744   7776666654322    122245667777766666543       345


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC--------------C
Q 015283          321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD--------------G  383 (410)
Q Consensus       321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~--------------g  383 (410)
                      ++.++.++++++.+.+.|+ +.     +.+..+.+|+|+|+.+.   .++++++++++||.+.||              +
T Consensus       296 ~~~~~~~~~~~~~~~~~L~-~~-----~~~~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~  369 (393)
T TIGR03538       296 RENRALYREKFAAVLEILG-QV-----LDLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEG  369 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHH-hh-----CcccCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCC
Confidence            7888899999999999997 54     24467889999999763   345667777789999654              1


Q ss_pred             --eEEecCCCcccHHHHHHHHHHH
Q 015283          384 --RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       384 --Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                        ||+++. +++++++++++|++.
T Consensus       370 ~~Ris~~~-~~~~l~~~l~~l~~~  392 (393)
T TIGR03538       370 RVRIALVA-PLEECVEAAERIRSF  392 (393)
T ss_pred             EEEEEecC-CHHHHHHHHHHHHHh
Confidence              999987 889999999999875

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=3.6e-44  Score=342.78  Aligned_cols=363  Identities=15%  Similarity=0.163  Sum_probs=278.6

Q ss_pred             cCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHh
Q 015283           11 EGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL   90 (410)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~   90 (410)
                      .++.....+.+.++....  ...+++|+|+.|.+    ... .++.+.+++.+...... ..|.+..|.+++|+++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~   80 (391)
T PRK07309          9 KQLDKIEVSLIRQFDQSI--SDIPGILKLTLGEP----DFT-TPDHVKEAAKRAIDANQ-SHYTGMAGLLELRQAAADFV   80 (391)
T ss_pred             hhhhhcCccHHHHHHHHH--HhcCCeEEcCCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHH
Confidence            445555554333332212  11257999999998    222 25778888877765433 56988999999999999999


Q ss_pred             cCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           91 FGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        91 ~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      ...++..+++ ++|++  |+|+++++.++.  ...+.+||+|++++|+|..+...++..|.+++.++.. ++++.+|++.
T Consensus        81 ~~~~~~~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~  155 (391)
T PRK07309         81 KEKYNLDYAPENEILV--TIGATEALSASL--TAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEM  155 (391)
T ss_pred             HHHhCCCCCCCCcEEE--eCChHHHHHHHH--HHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHH
Confidence            8777776664 68999  999999999984  3446799999999999999999999999999988873 4567899999


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +++.+++.+++++++++++|+||||.+++.+++++|+++|++||+++|+|++|.++.+.+.  ...++...  ..+++++
T Consensus       156 l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~--~~~~~i~  231 (391)
T PRK07309        156 LEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PHVSIAEY--LPDQTIL  231 (391)
T ss_pred             HHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CCCCHHHh--ccCCEEE
Confidence            9998875434567777789999999999999999999999999999999999999886421  12222222  2368999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ++||||.||++|+|+||++.   ++++++++.....    ....+++...|.++..+|++...      .....++.+++
T Consensus       232 ~~S~SK~~g~~GlRvG~~v~---~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~------~~~~~~~~~~~  298 (391)
T PRK07309        232 INGLSKSHAMTGWRIGLIFA---PAEFTAQLIKSHQ----YLVTAATTMAQFAAVEALTNGKD------DALPMKKEYIK  298 (391)
T ss_pred             EecChhhccCccceeEEEEe---CHHHHHHHHHHHh----hcccCCChHHHHHHHHHHhCChh------HHHHHHHHHHH
Confidence            99999999999999999855   7787776654322    12235667778888888876532      12456778888


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-------HHHHHHhhhcCcEEEcCCC----------eEEecCCCc
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-------KAQSDNMTNKWHVYMTKDG----------RISLAGLSL  392 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~  392 (410)
                      +++.+.+.|+ +.+    +.+..+.+++|+|+.+.       .+++.++++++||.+.||.          ||+++. +.
T Consensus       299 ~~~~~~~~l~-~~~----~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~  372 (391)
T PRK07309        299 RRDYIIEKMT-DLG----FKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SM  372 (391)
T ss_pred             HHHHHHHHHH-HCC----CeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CH
Confidence            9999999998 776    46777889999997542       3456677777899998862          999987 78


Q ss_pred             ccHHHHHHHHHHHhhhc
Q 015283          393 AKCEYLADAIIDSYHNV  409 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++|+++++++
T Consensus       373 ~~l~~~i~~l~~~~~~~  389 (391)
T PRK07309        373 ETIKEAMKRLKEYMEEH  389 (391)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            89999999999998765

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=2.3e-44  Score=343.71  Aligned_cols=360  Identities=16%  Similarity=0.164  Sum_probs=280.0

Q ss_pred             cCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHh
Q 015283           11 EGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL   90 (410)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~   90 (410)
                      +++...++..+.++...+.  ..+..++|+.|.|    ..+ .++.+.+++.+.+.... ..|++..|.+++|+++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~p----~~~-~~~~~~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l   78 (387)
T PRK07683          7 PRVKDIQISGIRQFSNMVQ--NYDNLISLTIGQP----DFP-TPSHVKEAAKRAITENY-TSYTHNAGLLELRKAACNFV   78 (387)
T ss_pred             HHHHhCCccHHHHHHHHHH--hcCCeEEecCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHH
Confidence            3444455544433332222  2357899999987    333 25788888888776543 67988899999999999999


Q ss_pred             cCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           91 FGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        91 ~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      ...++..++++ +|++  |+|+++++.++..  ..+.+||.|++++|+|..|...++..|++++.++.. .+++.+|.+.
T Consensus        79 ~~~~g~~~~~~~~I~~--t~G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~  153 (387)
T PRK07683         79 KDKYDLHYSPESEIIV--TIGASEAIDIAFR--TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRLTAEA  153 (387)
T ss_pred             HHHhCCCCCCCCcEEE--eCChHHHHHHHHH--HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCCCHHH
Confidence            77777777888 8999  9999999998843  336799999999999999999999999999998873 4567788899


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +++.+++   +++++++++||||||.+++.+++++|+++|+++|++||+||+|+++.+.+   +..++..+.+..+++++
T Consensus       154 l~~~~~~---~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~  227 (387)
T PRK07683        154 LENAITE---KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ---PHTSIAHFPEMREKTIV  227 (387)
T ss_pred             HHHhcCc---CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC---CcCChhhccCCcCCeEE
Confidence            9988865   56777789999999999999999999999999999999999999987642   12233232233458999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ++||||.+|+||+|+||+++   ++++++++.....    .....++..+|.++..+|.++.      .++++.++++++
T Consensus       228 ~~s~SK~~~~pGlRiG~i~~---~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~  294 (387)
T PRK07683        228 INGLSKSHSMTGWRIGFLFA---PSYLAKHILKVHQ----YNVTCASSISQYAALEALTAGK------DDAKMMRHQYKK  294 (387)
T ss_pred             EeeccccccCccceeEEEEc---CHHHHHHHHHHHH----hccCCCChHHHHHHHHHHhCCh------HHHHHHHHHHHH
Confidence            99999999999999999855   7776666654321    1223456677888888887642      235677888999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcc
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLA  393 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~  393 (410)
                      +++.+.+.|. +.+    +.+..+++++|+|+.+     + .+++.++++++||.+.||.          ||+++. +++
T Consensus       295 ~~~~~~~~l~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~  368 (387)
T PRK07683        295 RRDYVYNRLI-SMG----LDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIE  368 (387)
T ss_pred             HHHHHHHHHH-HcC----CcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHH
Confidence            9999999998 776    4677888999998743     2 3456677787899999862          999987 899


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      ++.+++++|.+++.+
T Consensus       369 ~~~~al~~l~~~l~~  383 (387)
T PRK07683        369 TLKEGLDRLEAFLQQ  383 (387)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998765

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-44  Score=344.33  Aligned_cols=369  Identities=19%  Similarity=0.212  Sum_probs=290.2

Q ss_pred             cccccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK   84 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~   84 (410)
                      |++++++...+++.+..+....++  ...+++++|+.|.|    ..+ .++.+.+++.+.+.... ..|++..|.+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~   75 (393)
T PRK05764          2 MKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEP----DFD-TPEHIKEAAIEALDDGK-TKYTPAAGIPELRE   75 (393)
T ss_pred             cchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCC----CCC-CCHHHHHHHHHHHhcCC-CCcCCCCChHHHHH
Confidence            567788888888887554443332  12357899999998    333 36888888887775443 56988899999999


Q ss_pred             HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283           85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG  164 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~  164 (410)
                      ++++++.+.++..+++++|++  ++|+++++..+.  ...+.+||.|++++|+|..+...++.+|.+++.+++.++.++.
T Consensus        76 ~ia~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~~--~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  151 (393)
T PRK05764         76 AIAAKLKRDNGLDYDPSQVIV--TTGAKQALYNAF--MALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK  151 (393)
T ss_pred             HHHHHHHHHhCCCCCHHHEEE--eCCcHHHHHHHH--HHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence            999998777776777899999  999999999873  3347799999999999999999999999999999985455678


Q ss_pred             cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH-hhc
Q 015283          165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATR  243 (410)
Q Consensus       165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~  243 (410)
                      +|++.+++.+..   ++.++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++.  ...++... .+.
T Consensus       152 ~d~~~l~~~l~~---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~  226 (393)
T PRK05764        152 LTVEQLEAAITP---KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPEL  226 (393)
T ss_pred             CCHHHHHHhhCc---cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCCC
Confidence            999999998864   566777899999999999999999999999999999999999998876421  11222222 233


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++++++||||.++++|+|+||++.   ++++++++....    .....+++.++|.++...|.+.      .+++++.
T Consensus       227 ~~~~i~~~s~SK~~~~~G~RiG~i~~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~  293 (393)
T PRK05764        227 RDRTITVNGFSKAYAMTGWRLGYAAG---PKELIKAMSKLQ----SHSTSNPTSIAQYAAVAALNGP------QDEVEEM  293 (393)
T ss_pred             cCCEEEEecCcccccCccceeEEEec---CHHHHHHHHHHH----hhcccCCChHHHHHHHHHHcCC------hHHHHHH
Confidence            46899999999999999999999754   788666655432    2234467778888887777631      2345677


Q ss_pred             HHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------e
Q 015283          324 AGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------R  384 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------R  384 (410)
                      ++.++++++.+.+.|+ +. +    +.+..+++++|+|+.+.          .++...+++++||.+.||.        |
T Consensus       294 ~~~~~~~~~~l~~~L~-~~~g----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vR  368 (393)
T PRK05764        294 RQAFEERRDLMVDGLN-EIPG----LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVR  368 (393)
T ss_pred             HHHHHHHHHHHHHHHh-hCCC----CcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEE
Confidence            8888999999999998 77 4    46677888899887542          3456777777899999862        9


Q ss_pred             EEecCCCcccHHHHHHHHHHHhhhc
Q 015283          385 ISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       385 is~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |+++. +++++++++++|+++++++
T Consensus       369 is~~~-~~~~~~~~i~~l~~~~~~~  392 (393)
T PRK05764        369 LSYAT-SLEDLEEGLERIERFLESL  392 (393)
T ss_pred             EEecC-CHHHHHHHHHHHHHHHHhh
Confidence            99987 8999999999999998764

>PRK07324 transaminase; Validated

Probab=100.00  E-value=2.2e-44  Score=341.71  Aligned_cols=334  Identities=15%  Similarity=0.123  Sum_probs=265.3

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ..++++|+.|++    ..+ .++.+ +++.+++.... ..|++..|.++||+++++++.+     +++++|++  |+|++
T Consensus        25 ~~~~~~~~~~e~----~~~-~~~~~-~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G~~   90 (373)
T PRK07324         25 ESCIDSLTLEEL----LAL-AGKNP-EAFYQELGQKK-LTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNGAT   90 (373)
T ss_pred             cCCCCCCcHHHH----Hhc-cCcch-HHHHHHHhcCC-ccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCChH
Confidence            357999999998    222 24455 66666665544 6899999999999999999753     34789999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++.+++  ...+.+||+|+++.|+|..+...++..|++++.+++.+++++.+|++.+++.+.+   +++++++++||||
T Consensus        91 ~al~~~~--~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~~kli~i~~p~NP  165 (373)
T PRK07324         91 GANFLVL--YALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP---NTKLICINNANNP  165 (373)
T ss_pred             HHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC---CCcEEEEeCCCCC
Confidence            9999984  3447799999999999999999999999999999986556788999999888764   6678888999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|++||++||+||+|.++.+++   ...+   .....+++|+++||||.+|++|+|+||++.   
T Consensus       166 tG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s---~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~---  236 (373)
T PRK07324        166 TGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPS---IADLYEKGISTNSMSKTYSLPGIRVGWIAA---  236 (373)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCC---hhhccCCEEEEecchhhcCCccceeEEEec---
Confidence            9999999999999999999999999999999988642   1112   223346789999999999999999999844   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++++...    ......+++.+.+.++...|++.      .+++++.++.++++++.+.+.|+ +.+.   +....
T Consensus       237 ~~~li~~~~~~----~~~~~~~~~~~~q~~a~~~l~~~------~~~l~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~  302 (373)
T PRK07324        237 NEEVIDILRKY----RDYTMICAGVFDDMLASLALEHR------DAILERNRKIVRTNLAILDEWVA-KEPR---VSYVK  302 (373)
T ss_pred             CHHHHHHHHHH----hCcEEecCChHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHh-cCCC---ceEEC
Confidence            77866665543    33233456677788887777642      34567888899999999999998 6632   45677


Q ss_pred             CCcceeeecCC-----CHHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          353 RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       353 ~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |.+|+|.|+.+     +.+++.++++++||.+.||.        |||++. +++.+.+++++|++++++.
T Consensus       303 p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~~  371 (373)
T PRK07324        303 PKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLREF  371 (373)
T ss_pred             CCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence            88777766533     24567888887899999983        999987 8899999999999998764

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=5.8e-44  Score=341.43  Aligned_cols=340  Identities=17%  Similarity=0.160  Sum_probs=264.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt  112 (410)
                      +.+++|+.|.|    ..+. ++.+.+++.+.+.... ..|++..|.+++|+++++++.+.++..++++ +|++  |+|++
T Consensus        26 ~~~i~l~~g~p----~~~~-p~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~   97 (387)
T PRK08912         26 HGAINLGQGFP----DDPG-PEDVRRAAADALLDGS-NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMV--TSGAT   97 (387)
T ss_pred             CCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEE--eCCcH
Confidence            57899999998    2222 4667777666554443 6799999999999999999887778778888 8999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++..++  ...+.+||+|++++|+|+.+...++..|++++.+++. .+++.+|++.+++.+..   +++++++++||||
T Consensus        98 ~al~~~~--~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP  171 (387)
T PRK08912         98 EALAAAL--LALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE-PPHWRLPRAALAAAFSP---RTKAVLLNNPLNP  171 (387)
T ss_pred             HHHHHHH--HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccCcCCHHHHHHHhCc---cceEEEEeCCCCC
Confidence            9998873  3446799999999999999999999999999999873 34678999999998864   5667777899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.++|.+++++|+++|++|+++||+||+|.++.+++.  ...++....+..+++++++||||.||++|+|+||+++   
T Consensus       172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~---  246 (387)
T PRK08912        172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR--RHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCA---  246 (387)
T ss_pred             cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC--CCcChhhCCCccCceEEEeechhhccCcCceeEEEec---
Confidence            99999999999999999999999999999998886531  1112222222235899999999999999999999855   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++.+.....    ....+.+...|.++...+...      .+++++.+++++++++.+.+.|+ ..|    +.+.+
T Consensus       247 ~~~~~~~l~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~  311 (387)
T PRK08912        247 APPLLRVLAKAHQ----FLTFTTPPNLQAAVAYGLGKP------DDYFEGMRADLARSRDRLAAGLR-RIG----FPVLP  311 (387)
T ss_pred             CHHHHHHHHHHHh----hccccCChHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHH-hCC----CcccC
Confidence            7776666544322    111234444566665555432      23346788899999999999998 776    46677


Q ss_pred             CCcceeeecCCC-------H-HHHHHhhhcCcEEEcCC----------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          353 RQIGMFSFTGLN-------K-AQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       353 ~~~~~~~~~~~~-------~-~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +++++|+|+.+.       . +++.++++++||.+.|+          +  ||+++. +++.+++++++|+++++.
T Consensus       312 ~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~  386 (387)
T PRK08912        312 SQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR  386 (387)
T ss_pred             CCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence            888999997542       2 35677777789999885          1  999997 789999999999998764

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=4.6e-44  Score=344.12  Aligned_cols=338  Identities=17%  Similarity=0.155  Sum_probs=257.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      +++++|+.|++    ..+ +++.+.+++.+.+..    .....|.+..|.++||+++++++.+.++..+++++|++  |+
T Consensus        34 ~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~  106 (409)
T PRK07590         34 AKIIRLGIGDV----TQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFI--SD  106 (409)
T ss_pred             CceEEecCcCC----CCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEE--CC
Confidence            56899999997    333 257778877776643    12367989999999999999998777788889999999  99


Q ss_pred             ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC-----------ccceeeecCCCcccChhhHHHHHhcCC
Q 015283          110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP-----------WSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      |+++++.++   ...+.+||+|++++|+|+.|...++..|.+           ++.+++.+++++.+|++.         
T Consensus       107 Ga~~al~~l---~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~---------  174 (409)
T PRK07590        107 GAKCDTGNI---LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE---------  174 (409)
T ss_pred             CHHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc---------
Confidence            999999875   344679999999999999999999999987           888887434445455331         


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      ++++++++++||||||.++|.+++++|+++|++||++||+||+|.+|.+.+.  ...++..+....+++|+++||||.||
T Consensus       175 ~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~~  252 (409)
T PRK07590        175 EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS--LPHSIYEIEGARECAIEFRSFSKTAG  252 (409)
T ss_pred             cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC--CCcchhhCCCcccceEEEecCccccC
Confidence            2566777789999999999999999999999999999999999999876421  11122222122347999999999999


Q ss_pred             ccCCCcceEEEEeCCchhHHHH--------HHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARV--------KSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +||+|+||+++   ++++++++        ...........+.+++.+.|.++..++.+..     .+++++.++.++++
T Consensus       253 ~pGlRiG~~i~---~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~  324 (409)
T PRK07590        253 FTGTRCAYTVV---PKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG-----KAQIKELIDYYMEN  324 (409)
T ss_pred             CcCceeEEEEc---CHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHH
Confidence            99999999854   77766522        1111111122233567788888877776532     24567888999999


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKC  395 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i  395 (410)
                      ++++.+.|+ +.+    +.+..+.+++|+|+.+    + .+++..+++++||.+.||.          ||+++. +++++
T Consensus       325 r~~l~~~L~-~~~----~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l  398 (409)
T PRK07590        325 AKIIREGLE-SAG----FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SRENV  398 (409)
T ss_pred             HHHHHHHHH-hcC----CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHHH
Confidence            999999998 776    4666778899999865    2 3456778877899999872          999755 88999


Q ss_pred             HHHHHHHHHHh
Q 015283          396 EYLADAIIDSY  406 (410)
Q Consensus       396 ~~~~~~l~~~l  406 (410)
                      ++++++|++++
T Consensus       399 ~~~l~rl~~~~  409 (409)
T PRK07590        399 LEAMERIKKAL  409 (409)
T ss_pred             HHHHHHHHhhC
Confidence            99999998764

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.7e-44  Score=342.38  Aligned_cols=342  Identities=16%  Similarity=0.147  Sum_probs=273.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +++|+|+.|.+    ..++ ++.+.+++.+...... ..|.+..|.+++|+++++++.+.+|..+++++|++  |+|+++
T Consensus        33 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~  104 (391)
T PRK08361         33 ENVISLGIGEP----DFDT-PKNIKEAAKRALDEGW-THYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIV--TAGAYE  104 (391)
T ss_pred             cCeEEcCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEE--eCChHH
Confidence            46899999987    3333 6788888887765543 66988899999999999998776677788899999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.+++  ...+.+||+|++++|+|..+...++..|.+++.+++.++.++.+|++.+++.+++   ++.++++++|+|||
T Consensus       105 al~~~~--~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~v~i~~p~NPt  179 (391)
T PRK08361        105 ATYLAF--ESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK---RTRMIVINYPNNPT  179 (391)
T ss_pred             HHHHHH--HHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc---ccEEEEEeCCCCCC
Confidence            999874  3346799999999999999999999999999999986555678999999998875   56677778999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.++|.+++++|+++|+++++++|+||+|.++.+.+.  ...++...  ..+++++++|+||.||++|+|+||+++   +
T Consensus       180 G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~---~  252 (391)
T PRK08361        180 GATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIA---P  252 (391)
T ss_pred             CcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhcc---C
Confidence            9999999999999999999999999999999875421  11122111  235899999999999999999999854   6


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++++...    ......+.+.+.|.++..+|.+...    .+++++.++.++++++.+.+.|+ +++  + +.+..+
T Consensus       253 ~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~L~-~~~--~-~~~~~p  320 (391)
T PRK08361        253 EQVIKDMIKL----HAYIIGNVASFVQIAGIEALRSKES----WKAVEEMRKEYNERRKLVLKRLK-EMP--H-IKVFEP  320 (391)
T ss_pred             HHHHHHHHHH----HhhhccCCChHHHHHHHHHhcCCcc----cHHHHHHHHHHHHHHHHHHHHHH-hCC--C-CeecCC
Confidence            7766655432    2222335677788888888887543    24567889999999999999998 763  1 567788


Q ss_pred             CcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          354 QIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       354 ~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++++|+|+.+     + .+++..+++++||.+.||.          ||+++. +++++++++++|++++++
T Consensus       321 ~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~  390 (391)
T PRK08361        321 KGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE  390 (391)
T ss_pred             CEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence            8999999744     3 3456677776899998862          999986 788999999999998865

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=8.6e-44  Score=338.03  Aligned_cols=347  Identities=14%  Similarity=0.100  Sum_probs=259.6

Q ss_pred             CCCcccchhHhhhcCC---CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283           18 PDPILGVSEAFKADTD---EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD   94 (410)
Q Consensus        18 ~~~~~~~~~~~~~~~~---~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~   94 (410)
                      +.++.++...+.+...   .++++|+.|.|    ..++ ++.+.+++.+....  ...|++..|.+++|+++++++.+.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~   77 (374)
T PRK05839          5 PYPFEKLRELLKEITPNKEYKGLDLTIGEP----QFET-PKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRF   77 (374)
T ss_pred             cchHHHHHHHHHHhhhcCCCCeEEcCCCCC----CCCC-CHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHh
Confidence            3444444444443333   38999999997    3332 57788887765432  4779889999999999999998877


Q ss_pred             CCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHH
Q 015283           95 NSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus        95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                      |..+++++|++  |+|+++++..+..++ .+ .+||.|++++|+|+.|...+...|++++.+++..++++.+|++..+  
T Consensus        78 g~~~~~~~I~i--t~G~~~al~~~~~~~-~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--  152 (374)
T PRK05839         78 KIELKENELIP--TFGTREVLFNFPQFV-LFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--  152 (374)
T ss_pred             CCCCCcceEEE--ecCcHHHHHHHHHHH-hcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--
Confidence            87888999999  999999998863222 12 3789999999999999999999999999999854556777765432  


Q ss_pred             HhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-----hcCCcEE
Q 015283          174 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-----TRGMELL  248 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-----~~~~~~i  248 (410)
                      +.    ++++++++|||||||.++|.+++++|+++|+++|++||+||+|.++.+++   ...++....     ...++++
T Consensus       153 ~~----~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi  225 (374)
T PRK05839        153 LQ----EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVL  225 (374)
T ss_pred             hc----cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEE
Confidence            22    45666778999999999999999999999999999999999999986432   111221211     1336899


Q ss_pred             EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +++||||.|++||+|+||++.   ++++++++....    .....+.+...|.++...+.+.+       ++++.++.++
T Consensus       226 ~~~SfSK~~~~~GlRiG~ii~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~  291 (374)
T PRK05839        226 VINSISKRSSAPGLRSGFIAG---DASILKKYKAYR----TYLGCASPLPLQKAAAVAWLDDE-------HAEFFRNIYA  291 (374)
T ss_pred             EEeccccccCCccceeEEEec---CHHHHHHHHHHH----hhcCCCCChHHHHHHHHHhccch-------HHHHHHHHHH
Confidence            999999999999999999854   777666654432    22223456667777766665432       3456778888


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCC----------C--eEEecCCCccc
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKD----------G--RISLAGLSLAK  394 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~~  394 (410)
                      ++++++.+.|.        +.  .|.+|+|+|+.+  +.+++.++++++||.+.||          +  |||++. ++++
T Consensus       292 ~~~~~~~~~l~--------~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~  360 (374)
T PRK05839        292 KNLKLAREILG--------IT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPK  360 (374)
T ss_pred             HHHHHHHHhcC--------CC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHH
Confidence            88887776543        22  577899999977  3556777777689999985          1  999987 8999


Q ss_pred             HHHHHHHHHHHhhh
Q 015283          395 CEYLADAIIDSYHN  408 (410)
Q Consensus       395 i~~~~~~l~~~l~~  408 (410)
                      +.+++++|++++++
T Consensus       361 ~~~~l~~l~~~l~~  374 (374)
T PRK05839        361 LEKALEIIKTYLEN  374 (374)
T ss_pred             HHHHHHHHHHHhhC
Confidence            99999999998753

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=2e-43  Score=338.84  Aligned_cols=348  Identities=18%  Similarity=0.164  Sum_probs=272.2

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +.++|+|+.|.|. ....+ +++.+.+++.+.+.... ..|++..|.+++|+++++++...++..+++++|++  |+|++
T Consensus        29 ~~~~i~l~~g~p~-~~~~~-p~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G~~  103 (398)
T PRK08363         29 GIKVIRLNIGDPV-KFDFQ-PPEHMKEAYCRAIKEGH-NYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TAAVT  103 (398)
T ss_pred             CCCeEEEeCCCCC-cCCCC-CCHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eCCHH
Confidence            3579999999981 11222 26888888887775443 57988899999999999998887788888999999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++.++.  ...+.+||+|++++|+|..+...++..|.+++.++..+++++.+|++.+++.+.+   ++.++++++||||
T Consensus       104 ~al~~~~--~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NP  178 (398)
T PRK08363        104 EALQLIF--GALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE---KTKAIAVINPNNP  178 (398)
T ss_pred             HHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc---ceEEEEEECCCCC
Confidence            9999984  3347799999999999999999999999888877433456677899999988864   5677777899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe-
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC-  271 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~-  271 (410)
                      ||.+++.+++++|+++|+++|+++|+||+|.++.+.+   ...++..+ ....++++++||||.|++||+|+||+  ++ 
T Consensus       179 tG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~--~~~  252 (398)
T PRK08363        179 TGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSL-TKDVPVIVMNGLSKVYFATGWRLGYI--YFV  252 (398)
T ss_pred             CCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHc-CcCCcEEEEecchhccCCccceEEEE--EEe
Confidence            9999999999999999999999999999999887642   11222222 23347999999999999999999998  43 


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                      +++++++.+...+....... .+++..+|.++..+|.+.      .+++++.+++++++++++.+.|+ +++  + +.+.
T Consensus       253 ~~~~~~~~l~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~------~~~l~~~~~~~~~~~~~l~~~L~-~~~--~-~~~~  321 (398)
T PRK08363        253 DPEGKLAEVREAIDKLARIR-LCPNTPAQFAAIAGLTGP------MDYLEEYMKKLKERRDYIYKRLN-EIP--G-ISTT  321 (398)
T ss_pred             CcHHHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHh-cCC--C-CEec
Confidence            45666676666554332222 246777788887777642      24456788899999999999998 763  1 5667


Q ss_pred             cCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          352 LRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       352 ~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+.+++|.|+.+       +.+++.++++++||.+.||.          |||++. +++++++++++|++++.+
T Consensus       322 ~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~  394 (398)
T PRK08363        322 KPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRE  394 (398)
T ss_pred             CCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence            788999998633       24556777777899998862          999975 889999999999998765

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=6.6e-44  Score=340.60  Aligned_cols=336  Identities=14%  Similarity=0.155  Sum_probs=266.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt  112 (410)
                      .++|+|+.|.+    ..+. ++.+.+++.+...... ..|.+..|.+++|+++++++.+.++..++++ +|++  |+|++
T Consensus        30 ~~~i~l~~g~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~--t~G~~  101 (386)
T PRK09082         30 HGAINLSQGFP----DFDG-PPYLVEALAYAMAAGH-NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITV--TAGAT  101 (386)
T ss_pred             CCEEEecCCCC----CCCC-CHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCHH
Confidence            46899999987    3322 5778888877765443 6798899999999999999877667766665 7988  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++..+.  ...+.+||+|++++|+|+.+...++..|.+++.+++. .+++.+|++.+++.+++   +++++++++|+||
T Consensus       102 ~al~~~~--~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NP  175 (386)
T PRK09082        102 EALFAAI--LALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQ-PPDFRVDWQRFAAAISP---RTRLIILNTPHNP  175 (386)
T ss_pred             HHHHHHH--HHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccccCCHHHHHHhcCc---cceEEEEeCCCCC
Confidence            9999884  3446799999999999999999999999999999984 34688999999998865   5667777899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|++|++++|+||+|.++.+++.  ...++..+....+++++++||||.+|++|+|+||+++   
T Consensus       176 tG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~---  250 (386)
T PRK09082        176 SGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA--GHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA---  250 (386)
T ss_pred             CCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC--CCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC---
Confidence            99999999999999999999999999999998886421  1122222222346899999999999999999999754   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++.+.....    ....+++...|.++..++.+.      .+++++.++.++++++++.+.|+ +.+    +.+.+
T Consensus       251 ~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~~  315 (386)
T PRK09082        251 PAALSAEFRKVHQ----YNTFTVNTPAQLALADYLRAE------PEHYLELPAFYQAKRDRFRAALA-NSR----FKLLP  315 (386)
T ss_pred             CHHHHHHHHHHHh----hhcCCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hCC----CcccC
Confidence            7786666555332    222356777888887777632      23456788899999999999998 766    46777


Q ss_pred             CCcceeeecCC------CH-HHHHHhhhcCcEEEcCCC------------eEEecCCCcccHHHHHHHHHH
Q 015283          353 RQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG------------RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       353 ~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~g------------Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      +.+++|+|+.+      +. +++.++++++||.+.||.            ||+++. +++++++++++|++
T Consensus       316 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~  385 (386)
T PRK09082        316 CEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ  385 (386)
T ss_pred             CCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence            88999999753      23 456677778899998861            999987 88999999999875

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-42  Score=331.83  Aligned_cols=361  Identities=21%  Similarity=0.266  Sum_probs=268.7

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCC-c-ccCCceEEEecCChh
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS-V-LKEQRVATVQGLSGT  112 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~-~-~~~~~i~~~~t~ggt  112 (410)
                      ..+|.+.|.+.+..+ +.+.+.+.+++.+.... ....|++..|.++||+++++++.+..+. . .+.++|++  |+|++
T Consensus         4 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~i--t~G~~   79 (388)
T PRK08637          4 TKYNATIGMATEKGG-PMYLSSLQDLLNDLTPD-EIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIV--TNALT   79 (388)
T ss_pred             cceecceeeEecCCC-cchHHHHHHHHHhhccc-cccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeE--ccchH
Confidence            457889999854444 45567777776654333 3488999999999999999998665422 1 12257888  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHHHHHhc-CCCCcEEEEeCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILLHGCAH  190 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~~~~ii~~~p~  190 (410)
                      +++.++..+  .+.+||.|++++|+|+.|...+. ..|++++.+++.+ +++++|++.+++.++. .++.+.++++++||
T Consensus        80 ~al~~~~~~--l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~  156 (388)
T PRK08637         80 HGLSLVADL--FVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPN  156 (388)
T ss_pred             HHHHHHHHH--hcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCC
Confidence            999987433  36799999999999999998765 5899999999832 3457899999988871 12356777889999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHH-----cCCcccccccCCCCCCCCCCCchhH-hHHHhhcCCcE--EEEecccccccccCC
Q 015283          191 NPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDNDASS-VRLFATRGMEL--LVAQSYSKNLGLYAE  262 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~-----~~~~li~Deay~~~~~~~~~~~~~~-~~~~~~~~~~~--i~~~S~sK~~~~~G~  262 (410)
                      ||||.+++.+++++|+++|++     |+++||+||+|.++.+.+.  ...+ ...+.+..+++  ++++|+||.+++||+
T Consensus       157 NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~--~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGl  234 (388)
T PRK08637        157 NPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS--YKESLFAALANLHSNILAVKLDGATKEEFVWGF  234 (388)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc--cchhhHHHhhcccccceEEEeccccccCCCccc
Confidence            999999999999999999875     8999999999999986531  1112 12223333464  456799999999999


Q ss_pred             CcceEEEEe---CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          263 RIGAMNVVC---SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       263 r~G~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      |+||+++..   .++++.+++.............+++.++|.++..+|.++.+    .+++++.+..++++++.+.+.|+
T Consensus       235 RlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~l~  310 (388)
T PRK08637        235 RVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF----DKEKQEKFQILKERYEKTKEVLY  310 (388)
T ss_pred             ceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence            999985321   24676666655432222223346788899999999987654    55667778889989888888887


Q ss_pred             hccCCCCCcccccCCcceeeecCCC----HHHHHHhhhcCcEEEcCCC----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          340 AKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       340 ~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       ..+....+.+.++++|+|+|+.+.    .++++++++++||.+.+.+    ||+++..+++++++++++|+++++.+
T Consensus       311 -~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~  387 (388)
T PRK08637        311 -DGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIKDL  387 (388)
T ss_pred             -hhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence             553222256778889999998763    3456677676799887543    99998878999999999999998764

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=5.1e-43  Score=336.19  Aligned_cols=366  Identities=16%  Similarity=0.139  Sum_probs=279.6

Q ss_pred             CcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc
Q 015283           20 PILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV   97 (410)
Q Consensus        20 ~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~   97 (410)
                      ++.++...+++.  ++.++++|+.|.| +.....++++.+.+++.+.+.......|.+..|.+++|+++++++....+..
T Consensus        15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~   93 (403)
T TIGR01265        15 PIRAIVDNLKVKPNPEKPIIPLSHGDP-SVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGK   93 (403)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEeCCCCC-CccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence            445555555554  2358999999997 1111223368888888887755433579889999999999999988766777


Q ss_pred             ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283           98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA  177 (410)
Q Consensus        98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~  177 (410)
                      +++++|++  |+|+|+++.++...  .+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++.+++.+.+ 
T Consensus        94 ~~~~~ii~--t~G~t~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-  168 (403)
T TIGR01265        94 LTADDVVL--TSGCSQAIEICIEA--LANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE-  168 (403)
T ss_pred             CCHHHEEE--ecChHHHHHHHHHH--hCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc-
Confidence            77899999  99999999998433  35799999999999999999999999999988875455678999999988864 


Q ss_pred             CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                        ++.++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+.+  ....++..+ ....++|+++||||.|
T Consensus       169 --~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~~~~vi~~~S~SK~~  243 (403)
T TIGR01265       169 --KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASF-ASIVPVLSLGGISKRW  243 (403)
T ss_pred             --CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhh-ccCCcEEEEeeccccc
Confidence              56677779999999999999999999999999999999999999998653  122233232 2234799999999999


Q ss_pred             cccCCCcceEEEEeCCc-hhH-HHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSS-DLA-ARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      ++||+|+||++  +.++ ++. +++.+.+..... ...+++.+.|.++..+|.+..     ..++++.+++++++++.+.
T Consensus       244 ~~pGlRiG~~v--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~  315 (403)
T TIGR01265       244 VVPGWRLGWII--IHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTP-----QEFFDGKISVLKSNAELCY  315 (403)
T ss_pred             CCCcceEEEEE--EeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhCh-----HHHHHHHHHHHHHHHHHHH
Confidence            99999999984  3322 322 224443333322 123567788888888876521     3456788899999999999


Q ss_pred             HHhhhccCCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHH
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEY  397 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~  397 (410)
                      +.|+ ..+.   +.+..|.+|+|+|+.+.          .+++.++++++||.+.||.        ||+++. +++++++
T Consensus       316 ~~L~-~~~~---~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~  390 (403)
T TIGR01265       316 EELK-DIPG---LVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PESMLEE  390 (403)
T ss_pred             HHHh-cCCC---ceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHHHHHH
Confidence            9998 7631   45566889999998652          2456777777899999973        999987 7889999


Q ss_pred             HHHHHHHHhhhc
Q 015283          398 LADAIIDSYHNV  409 (410)
Q Consensus       398 ~~~~l~~~l~~~  409 (410)
                      ++++|++++.++
T Consensus       391 ~l~~l~~~~~~~  402 (403)
T TIGR01265       391 ACSRIKEFCERH  402 (403)
T ss_pred             HHHHHHHHHHhc
Confidence            999999998764

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=1e-42  Score=308.86  Aligned_cols=346  Identities=16%  Similarity=0.151  Sum_probs=287.4

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +++++.|++.+.    .++ .+|.+++|+.+.++.+. .+|+  .+.+++.+++++|+.++++..+.++.|.+  +.|.-
T Consensus        24 ~~DvlPmWVADM----Df~-~pp~i~~Al~~rvdhGv-fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~VV   93 (388)
T COG1168          24 NEDVLPMWVADM----DFP-TPPEIIEALRERVDHGV-FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPGVV   93 (388)
T ss_pred             CCCcceeeeecc----cCC-CCHHHHHHHHHHHhcCC-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCcch
Confidence            368999999987    444 37999999999988775 7784  67889999999999999999999999999  89999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      -++..+.+.+  ..+||.|++..|.|+++....+..|.+++..|+..+ ..+.+|++.|++.+.+  ++.+++++|||||
T Consensus        94 pgi~~~I~~~--T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~iLCnPHN  169 (388)
T COG1168          94 PGISLAIRAL--TKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLFILCNPHN  169 (388)
T ss_pred             HhHHHHHHHh--CcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEEEEeCCCC
Confidence            9999874333  669999999999999999999999999999999743 3568899999999987  4568888999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCcceEEEE
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      |||.+++.+||.+|.++|.+||+.||+||+|+++.+.+.  .+.++..+. ...++.+++.|.||+|+++|++++++  +
T Consensus       170 P~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~--~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~--I  245 (388)
T COG1168         170 PTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH--KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI--I  245 (388)
T ss_pred             CCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC--CccchhhcChhhhcceEEEeeccccccchhhhheeE--E
Confidence            999999999999999999999999999999999998642  233332222 23468999999999999999999998  6


Q ss_pred             eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                      ..++++.+++.+.+...   ...+++.++..|...++++++-   |   +.+..+.++.+++++.+.+.+.++.   +++
T Consensus       246 i~n~~lr~~~~~~l~~~---~~~~~n~lg~~A~~aAY~~G~~---W---Ld~L~~yl~~N~~~~~~~l~~~~P~---v~v  313 (388)
T COG1168         246 ISNRELRAKFLKRLKRN---GLHGPSALGIIATEAAYNQGEP---W---LDELLEYLKDNRDYVADFLNKHLPG---VKV  313 (388)
T ss_pred             ecCHHHHHHHHHHHHHh---cCCCCchHHHHHHHHHHHhchH---H---HHHHHHHHHHHHHHHHHHHHhhCCC---cEE
Confidence            67888777777766533   3457888888887777777632   3   4677888899999999999833432   688


Q ss_pred             ccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCC------C----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          351 ILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       351 ~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~------g----Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..|+++|.+|+++     + .+..+.++++.+|.+.+|      |    |+++++ +.+.+++++++|+.++++.
T Consensus       314 ~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~~  387 (388)
T COG1168         314 TEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKKR  387 (388)
T ss_pred             ecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhcc
Confidence            9999999999965     4 456778888899999987      1    999998 9999999999999998764

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=4e-43  Score=335.69  Aligned_cols=358  Identities=14%  Similarity=0.117  Sum_probs=271.8

Q ss_pred             CCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcC
Q 015283           13 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG   92 (410)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~   92 (410)
                      +...++..+.++.+...   .++++||+.|.|    ..+. ++.+.+++.+.+.... ..|++..|.+++|+++++++..
T Consensus         6 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~   76 (387)
T PRK07777          6 LRPFGTTIFAEMSALAV---RTGAVNLGQGFP----DEDG-PPEMLEAAQEAIAGGV-NQYPPGPGIPELRAAIAAQRRR   76 (387)
T ss_pred             hhhcCccHHHHHHHHHh---hCCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHH
Confidence            44445444444443332   347899999998    2222 3556676666654443 6798889999999999999877


Q ss_pred             CCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcccChhhH
Q 015283           93 ADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGM  170 (410)
Q Consensus        93 ~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l  170 (410)
                      .++..++++ +|++  |+|+++++.++  +...+.+||+|+++.|+|+.+...++..|.+++.+++.+. .++.+|++++
T Consensus        77 ~~g~~~~~~~~i~~--t~G~~~al~~~--~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l  152 (387)
T PRK07777         77 RYGLEYDPDTEVLV--TVGATEAIAAA--VLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDAL  152 (387)
T ss_pred             HhCCCCCCCCcEEE--eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHH
Confidence            777777776 7998  99999999887  3444679999999999999999999999999999988544 3678999999


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      ++.+.+   ++.++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+.+.  ...++..+.+..++++++
T Consensus       153 ~~~~~~---~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~  227 (387)
T PRK07777        153 RAAVTP---RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTVTI  227 (387)
T ss_pred             HHhcCc---ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEEEE
Confidence            998864   566777889999999999999999999999999999999999999886422  122232222234589999


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +||||.||++|+|+||+++   ++++++++....    ......++...|.++..++.+.      .+++++.++.++++
T Consensus       228 ~S~SK~~g~~GlRiG~~~~---~~~l~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~  294 (387)
T PRK07777        228 SSAAKTFNVTGWKIGWACG---PAPLIAAVRAAK----QYLTYVGGAPFQPAVAHALDHE------DAWVAALRDSLQAK  294 (387)
T ss_pred             eechhhccCcCceeEEEec---CHHHHHHHHHHH----hhcccCCCCHHHHHHHHHHhCC------cHHHHHHHHHHHHH
Confidence            9999999999999999754   777666554432    2112234555666776666643      23356788899999


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCC------C-HHHHHHhhhcCcEEEcCCC-------------eEEecCC
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG-------------RISLAGL  390 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ll~~~gi~v~~~g-------------Ris~~~~  390 (410)
                      ++.+.+.|+ +.+    +++.++++++|+|+.+      + .++++++++++||.+.||.             ||+++. 
T Consensus       295 ~~~l~~~L~-~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-  368 (387)
T PRK07777        295 RDRLAAGLA-EAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-  368 (387)
T ss_pred             HHHHHHHHH-hCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-
Confidence            999999998 776    4677788899999653      2 4557777777899998861             999987 


Q ss_pred             CcccHHHHHHHHHHHhh
Q 015283          391 SLAKCEYLADAIIDSYH  407 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~  407 (410)
                      +++++++++++|+++..
T Consensus       369 ~~~~l~~~l~~l~~~~~  385 (387)
T PRK07777        369 RDDTLDEAIRRLRALRG  385 (387)
T ss_pred             CHHHHHHHHHHHHHHhc
Confidence            89999999999988753

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=4.1e-43  Score=335.49  Aligned_cols=363  Identities=17%  Similarity=0.146  Sum_probs=277.9

Q ss_pred             cCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283           11 EGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      +++....+..+..+.+.+.+.  ++.+.++|+.|.+    ..+ .++.+.+++.+.........|.+..|.+++|+++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~   78 (386)
T PRK07550          4 PLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVP----GYP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAA   78 (386)
T ss_pred             hhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCC----CCC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHH
Confidence            345555566666666555533  3457899999997    232 267788887776543334679888999999999999


Q ss_pred             HhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283           89 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE  168 (410)
Q Consensus        89 ~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  168 (410)
                      ++...++..+++++|++  |+|+++++.+++..  .+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++
T Consensus        79 ~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~  154 (386)
T PRK07550         79 HYSRLYGAAISPEQVHI--TSGCNQAFWAAMVT--LAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPA  154 (386)
T ss_pred             HHHHHhCCCCCcceEEE--ecCcHHHHHHHHHH--hcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHH
Confidence            99877788888999999  99999999887433  367999999999999999999999999999999854566778999


Q ss_pred             hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283          169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL  248 (410)
Q Consensus       169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i  248 (410)
                      .+++.+++   +++++++++|+||||.++|.+++++|+++|++||++||+||+|.++.+.. . ...+.....+...+++
T Consensus       155 ~l~~~~~~---~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~-~-~~~~~~~~~~~~~~~i  229 (386)
T PRK07550        155 AAEALITP---RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGG-G-APHDLFADPDWDDTLV  229 (386)
T ss_pred             HHHHHhcc---cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCC-C-CCcchhhCCCccccEE
Confidence            99998875   55566667899999999999999999999999999999999999886531 1 1111111112245899


Q ss_pred             EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +++||||.+|++|+|+||++.   +++.++++.....    ....+++.++|.++..++.+.      .+++++.++.++
T Consensus       230 ~~~S~SK~~g~~G~RiG~i~~---~~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~  296 (386)
T PRK07550        230 HLYSFSKSYALTGHRVGAVVA---SPARIAEIEKFMD----TVAICAPRIGQIAVAWGLPNL------ADWRAGNRAEIA  296 (386)
T ss_pred             EEecchhhccCcccceEeeec---CHHHHHHHHHHHh----hcccCCCcHHHHHHHHHhccH------HHHHHHHHHHHH
Confidence            999999999999999999854   6776666554332    233456788888888887641      345567788899


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCc
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSL  392 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~  392 (410)
                      ++++.+.+.|. ...  + +.. .+.+++|.|+.+     + .+++.++++++||.+.||.          ||+++..++
T Consensus       297 ~~~~~l~~~L~-~~~--~-~~~-~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~  371 (386)
T PRK07550        297 RRRDAFRAVFA-RLP--G-WEL-LASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADV  371 (386)
T ss_pred             HHHHHHHHHHH-hCC--C-cee-CCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCH
Confidence            99999999998 652  1 333 356789999744     2 3456777777899999861          999987688


Q ss_pred             ccHHHHHHHHHHH
Q 015283          393 AKCEYLADAIIDS  405 (410)
Q Consensus       393 ~~i~~~~~~l~~~  405 (410)
                      +++++++++|++.
T Consensus       372 ~~~~~~~~~l~~~  384 (386)
T PRK07550        372 AGIGELVERLRAF  384 (386)
T ss_pred             HHHHHHHHHHHhh
Confidence            8999999999875

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.7e-43  Score=335.65  Aligned_cols=368  Identities=16%  Similarity=0.164  Sum_probs=278.9

Q ss_pred             cccccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK   84 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~   84 (410)
                      |++..++....++.+..+......  ..+.++++|+.|.+    ..+ +++.+.+++.+....  ...|++..|.+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~~~~a~~~~~~~--~~~Y~~~~g~~~lr~   73 (397)
T PRK07568          1 MKISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQP----DIK-TPEVFFEAIKNYDEE--VLAYSHSQGIPELRE   73 (397)
T ss_pred             CchhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCC----CCC-CCHHHHHHHHHHhcC--CcCcCCCCCCHHHHH
Confidence            445555666666666555443322  12346899999987    332 267888888765432  367988999999999


Q ss_pred             HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283           85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG  164 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~  164 (410)
                      ++++++. .++..+++++|++  |+|+++++.+++.  ..+.+||+|++++|+|..+...++..|.+++.+++.+++++.
T Consensus        74 ~ia~~~~-~~~~~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~  148 (397)
T PRK07568         74 AFAKYYK-KWGIDVEPDEILI--TNGGSEAILFAMM--AICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFH  148 (397)
T ss_pred             HHHHHHH-HhCCCCCcceEEE--cCChHHHHHHHHH--HhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence            9999986 4667778899999  9999999999843  336799999999999999998889999999999874344444


Q ss_pred             -cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283          165 -LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR  243 (410)
Q Consensus       165 -~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~  243 (410)
                       .+++.+++.+++   ++.++++++|+||||.+++.+++++|+++|+++|+++|+||+|.+|.+.+.  ...++..+.+.
T Consensus       149 ~~~~~~l~~~~~~---~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~s~~~~~~~  223 (397)
T PRK07568        149 LPSKEEIEKLITP---KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL--KYTSALSLEGL  223 (397)
T ss_pred             CCCHHHHHHhcCc---cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC--CccChhhcCCC
Confidence             357888888764   567777899999999999999999999999999999999999999986421  12232232223


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++++++||||.||++|+|+||+  ++.++++++++.....    . ..+++.+.|.++..+|++.      ++++++.
T Consensus       224 ~~~~i~~~S~SK~~~~~G~R~G~~--~~~~~~~~~~~~~~~~----~-~~~~s~~~q~~~~~~l~~~------~~~~~~~  290 (397)
T PRK07568        224 EDRVIIIDSVSKRYSACGARIGCL--ISKNKELIAAAMKLCQ----A-RLSPPTLEQIGAAALLDTP------ESYFDEV  290 (397)
T ss_pred             cCCEEEEecchhhccCCCcceEEE--ecCCHHHHHHHHHHhh----c-cCCCCcHHHHHHHHHhhCC------HHHHHHH
Confidence            568999999999999999999998  4455676665543322    1 2356777888888888753      2346788


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----HHHHHHhhhc-----CcEEEcCC-----------C
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNK-----WHVYMTKD-----------G  383 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~-----~gi~v~~~-----------g  383 (410)
                      ++.++++++.+.+.|+ +++.   +.+..|.+++|+|+.+.    .++...++++     +||.+.||           +
T Consensus       291 ~~~~~~~~~~l~~~L~-~~~~---~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~  366 (397)
T PRK07568        291 REEYKKRRDILYEELN-KIPG---VVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKN  366 (397)
T ss_pred             HHHHHHHHHHHHHHHh-cCCC---ceecCCCcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCC
Confidence            8899999999999998 7631   46677888999998662    3456666653     59999874           1


Q ss_pred             --eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          384 --RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 --Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                        ||+++. +++++++++++|++++++.
T Consensus       367 ~iRls~~~-~~~~~~~~~~~l~~~l~~~  393 (397)
T PRK07568        367 EIRIAYVL-NEEDLKRAMEILKEALEKY  393 (397)
T ss_pred             eEEEEEeC-CHHHHHHHHHHHHHHHHHh
Confidence              999976 7899999999999988753

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=1.5e-42  Score=333.28  Aligned_cols=373  Identities=16%  Similarity=0.120  Sum_probs=273.2

Q ss_pred             CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      ++...++..+..+....+.  ..++++++|+.|.| +..+.+ .++.+.+++.+.+..  ...|++..|.+++|++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~-~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~   84 (404)
T PRK09265          9 KLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNP-APFGFE-APDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQY   84 (404)
T ss_pred             HHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCC-CcCCCC-CCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHH
Confidence            3444454444334333332  23467899999987 222322 267777777665543  36799999999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      +.......+++++|++  ++|+++++.+++.  ..+.+||+|++++|+|..+...+...|.+++.+++..++++.+|+++
T Consensus        85 ~~~~~~~~~~~~~i~~--t~G~~~~l~~~~~--~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~  160 (404)
T PRK09265         85 YQQKGIPDVDVDDIYI--GNGVSELIVMAMQ--ALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDD  160 (404)
T ss_pred             HhccCCCCCCcccEEE--eCChHHHHHHHHH--HhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHH
Confidence            8755444677899999  9999999988743  34679999999999999999999989999888877444567899999


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +++.+..   ++.++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++.  ...++..+. ...++++
T Consensus       161 l~~~~~~---~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~vi~  234 (404)
T PRK09265        161 IRSKITP---RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASLA-PDLLCVT  234 (404)
T ss_pred             HHHhccc---cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHcC-CCceEEE
Confidence            9988864   567777789999999999999999999999999999999999999886421  112222221 2236899


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ++||||.+|+||+|+||++. ..+++..+.+.+.+... .....+++.++|.++..+|.+.+..   . ...+.++++.+
T Consensus       235 ~~S~SK~~~~pGlRiG~~v~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~---~-~~~~~~~~~~~  308 (404)
T PRK09265        235 FNGLSKAYRVAGFRVGWMVL-SGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSI---N-ELILPGGRLYE  308 (404)
T ss_pred             EecchhhccCcccceEEEEE-eCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhH---H-HHHHHHHHHHH
Confidence            99999999999999999842 23455444444444322 1223456777888888888654321   1 12223356777


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---------HHHHHHhhhcCcEEEcCCC----------eEEecCC
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---------KAQSDNMTNKWHVYMTKDG----------RISLAGL  390 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ll~~~gi~v~~~g----------Ris~~~~  390 (410)
                      +++.+.+.|+ +++  + +.+..|.+|+|+|+.+.         .+++.++++++||.+.||.          ||+++. 
T Consensus       309 ~r~~~~~~L~-~~~--~-~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~-  383 (404)
T PRK09265        309 QRDRAWELLN-AIP--G-VSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLP-  383 (404)
T ss_pred             HHHHHHHHHh-cCC--C-CcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCC-
Confidence            8888999998 763  1 56788899999997542         2456677777899998861          999964 


Q ss_pred             CcccHHHHHHHHHHHhhhc
Q 015283          391 SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++++|+++++..
T Consensus       384 ~~e~l~~~l~rl~~~l~~~  402 (404)
T PRK09265        384 RVDDLEEAIGRIGRFLSGY  402 (404)
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            8899999999999988753

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=7.6e-43  Score=334.33  Aligned_cols=343  Identities=13%  Similarity=0.135  Sum_probs=262.8

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCCh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG  111 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~gg  111 (410)
                      ++++++|+.|.|    ..+ .++.+.+++.+.........|++..|.+++|+++++++.+.++..++++ ++++  |+|+
T Consensus        28 ~~~~i~l~~g~p----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~--t~G~  100 (395)
T PRK08175         28 GEDIIDFSMGNP----DGP-TPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIV--TIGS  100 (395)
T ss_pred             CCCeEEcCCCCC----CCC-CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccCc
Confidence            467899999987    222 2455666665554333347799999999999999999987777777776 7999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++.++.  ...+.+||+|++++|+|+.+...++..|.+++.+++.++.   .+.+++++.++...++++++++++|||
T Consensus       101 ~~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~---~~~~~l~~~l~~~~~~~~~v~i~~p~N  175 (395)
T PRK08175        101 KEGLAHLM--LATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV---DFFNELERAIRESYPKPKMMILGFPSN  175 (395)
T ss_pred             HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCC---CcHHHHHHHHhhccCCceEEEEeCCCC
Confidence            99999873  3447799999999999999999889999999999884332   246778777765334567777789999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++.+++++|+++|++||++||+||+|.++.+++.  ...++..+....+.+++++||||.||+||+|+||++.  
T Consensus       176 PtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~--  251 (395)
T PRK08175        176 PTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW--KAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG--  251 (395)
T ss_pred             CCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC--CCcchhcCCCcccCEEEEeeccccccCcchhheeeeC--
Confidence            999999999999999999999999999999998876421  1112212111235788999999999999999999754  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++++.+..    .....+++...|.++..++.+.      .+++++.++.++++++++.+.|+ ..+    +.+.
T Consensus       252 -~~~l~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~  315 (395)
T PRK08175        252 -NPELVSALARIK----SYHDYGTFTPLQVAAIAALEGD------QQCVRDIAEQYKRRRDVLVKGLH-EAG----WMVE  315 (395)
T ss_pred             -CHHHHHHHHHHH----hhcccCCCcHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HcC----Cccc
Confidence             778666654422    2122345555677777777543      34567889999999999999998 776    4666


Q ss_pred             cCCcceeeecCCC--------HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          352 LRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       352 ~~~~~~~~~~~~~--------~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+.+|+|+|+.+.        .+++.++++++||.+.|+.          ||+++. +++.+.+++++|++++.+
T Consensus       316 ~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~  389 (395)
T PRK08175        316 MPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA  389 (395)
T ss_pred             CCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence            7888999998652        3456677777899999971          999975 889999999999998865

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=1.5e-42  Score=327.15  Aligned_cols=330  Identities=14%  Similarity=0.115  Sum_probs=259.1

Q ss_pred             eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhH
Q 015283           36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGS  114 (410)
Q Consensus        36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a  114 (410)
                      +++|+.|.|    ..++ ++.+.+++.+....  ...|++..|.++||+++++++.+.+|+.++++ +|++  |+|++++
T Consensus         2 ~~~~~~g~p----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~~a   72 (350)
T TIGR03537         2 LFDFGTGDP----KEPT-PPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSKEA   72 (350)
T ss_pred             eEeccCCCC----CCCC-CHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChHHH
Confidence            578999987    3333 67888888876542  46798889999999999999987778888887 8999  9999999


Q ss_pred             HHHHHHHHHHhCCC---CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          115 LRLAAALIERYFPG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       115 ~~~~~~~~~~~~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      +..+.  ...+.+|   |+|+++.|+|+.|...++..|.+++.+++.+++++.+|++.+++.+++   +++++++++|+|
T Consensus        73 i~~~~--~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~N  147 (350)
T TIGR03537        73 IFHFP--LVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE---ETKIVWINYPHN  147 (350)
T ss_pred             HHHHH--HHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh---ccEEEEEeCCCC
Confidence            99874  3336676   699999999999999999999999999985456788999999998875   567777889999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++.+++++|+++|+++|++||+||+|..+.+++   ...++...  ..+++++++|+||.+|++|+|+||++.  
T Consensus       148 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~--  220 (350)
T TIGR03537       148 PTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE---PPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAG--  220 (350)
T ss_pred             CcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC---CCCchhhc--CcCCEEEEeecccccCCccccceeeec--
Confidence            99999999999999999999999999999999876542   11122111  235899999999999999999999743  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++.+++....    .....+++..+|.++...+.+.+       +.++.+++++++++.+.+.|+ +.|    +++.
T Consensus       221 -~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~r~~l~~~~~~~~~~l~-~~g----~~~~  283 (350)
T TIGR03537       221 -DEKLISFLRKLR----ANFGVASPDFVQAAAKAAWSDDN-------HVLERRKIFKRKRDLFIEFFN-KVG----LEYL  283 (350)
T ss_pred             -CHHHHHHHHHHH----HhhccCCCHHHHHHHHHHhCCcH-------HHHHHHHHHHHHHHHHHHHHH-HCC----Cccc
Confidence             777666555432    22223455566676655565432       245678889999999999998 776    4667


Q ss_pred             cCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHH
Q 015283          352 LRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       352 ~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      .+.+++|+|+.+    + .++++.+++ +||.+.||.          ||+++. +++++++++++|+++
T Consensus       284 ~~~g~~~~~~~~~~~~~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~-~~~~~~~~l~~~~~~  350 (350)
T TIGR03537       284 YPDATFYLWVKVPSGIDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVP-TLEECEEALRLWERV  350 (350)
T ss_pred             CCCeEEEEEEECCCCCCHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHhcC
Confidence            788899998854    2 345666665 699999862          999974 889999999998763

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-43  Score=339.31  Aligned_cols=339  Identities=14%  Similarity=0.104  Sum_probs=250.3

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCC-CCCcc-c--CCceEEEecCC
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA-DNSVL-K--EQRVATVQGLS  110 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~-~~~~~-~--~~~i~~~~t~g  110 (410)
                      ++|+|+.|.|    +.++ ++.+.++.. .+..   ..|+++.|.+++|+++++++... .+... .  +++|++  |+|
T Consensus       101 ~~i~l~~g~p----~~~~-~~~v~e~~~-~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~G  169 (527)
T PRK09275        101 DAVSYVRDQL----GFDA-DEFVYELVD-GIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VEG  169 (527)
T ss_pred             HHHhhcCCCC----CCCC-CHHHHHHHH-HHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence            4699999998    6554 677777444 4432   34999999999999999965443 22221 2  348988  999


Q ss_pred             hhhHHHHHHHHH---HHhCCCCEEEEcCCCCcchhhhhhhCCCCc--cceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283          111 GTGSLRLAAALI---ERYFPGAKVLISSPTWGNHKNIFNDARVPW--SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL  185 (410)
Q Consensus       111 gt~a~~~~~~~~---~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~--~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii  185 (410)
                      +++++..++..+   ..+.|||+|++++|+|+.|...++..|..+  +.++..++++|.+|++++++++.+   ++++++
T Consensus       170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~---~tkai~  246 (527)
T PRK09275        170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP---SIKALF  246 (527)
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC---CCCEEE
Confidence            999999885432   146799999999999999999888765544  555544456789999999987764   677888


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER  263 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  263 (410)
                      +++||||||.++|.+++++|+++|++  ++++||+||+|..|.+.     ..++...  ..+++|+++||||.|+++|||
T Consensus       247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~s~~~~--~~~~~I~v~SfSK~f~mtG~R  319 (527)
T PRK09275        247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-----FRSLFAV--LPYNTILVYSFSKYFGATGWR  319 (527)
T ss_pred             EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-----ccCHHHh--CCCCEEEEeehhhhccCcHhH
Confidence            88999999999999999999999965  59999999999998742     1122111  235899999999999999999


Q ss_pred             cceEEEEeCCchhHHHHHHHH--------------------------------HhhccCcccCCChhHHHH-----HHHH
Q 015283          264 IGAMNVVCSSSDLAARVKSQL--------------------------------KRLARPMYSNPPVHGARI-----VANV  306 (410)
Q Consensus       264 ~G~l~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~-----a~~~  306 (410)
                      +||++  ++++++.+++.+.+                                +.....++.+.+...|.+     +..+
T Consensus       320 lG~i~--~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~al  397 (527)
T PRK09275        320 LGVIA--LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFAL  397 (527)
T ss_pred             Hhhhh--cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence            99984  44433333332212                                333344455566656664     2233


Q ss_pred             hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---------------------H
Q 015283          307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---------------------K  365 (410)
Q Consensus       307 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---------------------~  365 (410)
                      |+..      .+++++.++.++++++.+.+.|. . +    +...++++++|+|+++.                     .
T Consensus       398 l~~~------~~~~~~~~~~~~~Rr~~l~~~Lg-~-~----~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~  465 (527)
T PRK09275        398 LDEE------DAYKKAMKDIIRRRYKALYEGLG-L-P----EPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPV  465 (527)
T ss_pred             HhCc------hHHHHHHHHHHHHHHHHHHHHcC-C-C----CcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHH
Confidence            4432      34467888999999999988774 2 2    34457899999998542                     2


Q ss_pred             HHHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          366 AQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       366 ~~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +++.+|+++.||.+.||.         |||+++++++++.++.++|++++.+
T Consensus       466 ~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~  517 (527)
T PRK09275        466 DLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDE  517 (527)
T ss_pred             HHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence            457799999999999983         9999987889999999999999865

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=1.6e-42  Score=334.65  Aligned_cols=347  Identities=15%  Similarity=0.180  Sum_probs=280.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc---CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      +.+++|+.|.+ +..-+|  ...+.+++.+....   .....|.+..|.++||+++++++....|..+++++|++  |+|
T Consensus        89 ~~~i~f~~g~p-~~~~fp--~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T~G  163 (459)
T COG1167          89 PSVIDFAGGLP-DPSLFP--LEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--TSG  163 (459)
T ss_pred             CceecCCCCCC-CcccCC--HHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--eCC
Confidence            67899999986 332322  36666666665522   21367878899999999999998878899999999999  999


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      +++|++++.+++  +.|||+|++.+|+|.....+++.+|++++.||+.   ..++|++.+++.+.+. +...++++++.|
T Consensus       164 ~q~al~l~~~~l--~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~-~~k~~y~~P~~q  237 (459)
T COG1167         164 AQQALDLLLRLL--LDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQW-KPKAVYVTPTFQ  237 (459)
T ss_pred             HHHHHHHHHHHh--CCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhc-CCcEEEECCCCC
Confidence            999999985444  6699999999999999999999999999999983   4569999999999874 345667788889


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||||.++|.++.++|+++|++|+++||+||+|+.|.+++..  ..++ ...+..++||+++||||++. ||+|+||+++ 
T Consensus       238 NPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p--~~~l-~~ld~~~rViy~gSFSK~l~-PglRlG~vv~-  312 (459)
T COG1167         238 NPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPP--PPPL-KALDAPGRVIYLGSFSKTLA-PGLRLGYVVA-  312 (459)
T ss_pred             CCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCC--CCCh-HhhCCCCCEEEEeeehhhcc-cccceeeeeC-
Confidence            99999999999999999999999999999999999976322  2122 22345679999999999996 9999999855 


Q ss_pred             eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                        ++++++++....    ......++.+.|.+++..+.++.+    .++++++++.++++++.+.+.|+ +... ....+
T Consensus       313 --p~~~~~~~~~~k----~~~~~~~s~~~Q~~la~~l~~G~~----~~hl~~lR~~y~~rr~~l~~~L~-~~~~-~~~~~  380 (459)
T COG1167         313 --PPELIEKLLRLK----QAADLGPSSLSQAALAAFLLSGHY----DRHLRRLRREYARRRDALLEALA-EYLP-ELATW  380 (459)
T ss_pred             --CHHHHHHHHHHH----HHhcCCCChHHHHHHHHHHHcCCH----HHHHHHHHHHHHHHHHHHHHHHH-HhCC-CCeee
Confidence              778666655533    234557888998888888876654    77889999999999999999998 6642 22577


Q ss_pred             ccCCcceeeecCC----C-HHHHHHhhhcCcEEEcC-CC------------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          351 ILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTK-DG------------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       351 ~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~-~g------------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..|.+|+|+|+.+    + .+++.++++ .|+.+.| |.            |++++..+++++++++++|.+++.+.
T Consensus       381 ~~p~gG~flwl~l~~~~~~~~l~~~a~~-~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~  456 (459)
T COG1167         381 TRPEGGLFLWLELPEGIDARELLAAALE-KGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA  456 (459)
T ss_pred             ecCCceEEEEEEcCCCCCHHHHHHHHHH-CCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence            8899999999966    3 345666665 5898888 41            99999989999999999999998753

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=1.4e-42  Score=336.16  Aligned_cols=331  Identities=17%  Similarity=0.150  Sum_probs=259.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ..+++|+.|.|    ..+ .+|.+.+++.+....  ...|++..|.+++|+++++++....+   .+++|++  |+|+++
T Consensus        85 ~~~i~L~~g~p----~~~-~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iii--t~G~~~  152 (431)
T PRK15481         85 TPLHDLAGGNP----DPQ-RLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDL--TSGAID  152 (431)
T ss_pred             chhhhhhcCCC----Chh-HhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEE--ecCcHH
Confidence            35789998876    222 245677777665432  35798899999999999999754322   2468999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.++.  ...+.|||.|++++|+|+.|...++..|++++.+++. +  .++|++.+++.+++  +...++++++|||||
T Consensus       153 al~~~~--~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~--~g~~~~~l~~~~~~--~~k~i~~~p~p~NPT  225 (431)
T PRK15481        153 AIERLL--CAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVD-A--EGMQPEKLERALAQ--GARAVILTPRAHNPT  225 (431)
T ss_pred             HHHHHH--HHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccC-C--CCCCHHHHHHHHhc--CCCEEEECCCCCCCC
Confidence            999984  3346799999999999999999999999999999983 2  24899999998865  233445556999999


Q ss_pred             CCCCCHHHHHHHHHHHHHc-CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          194 GIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      |.++|.+++++|+++|+++ +++||+||+|.+|.+.+. .   +.  +....+++++++||||.|+ ||+|+||++.   
T Consensus       226 G~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~---~~--~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~---  295 (431)
T PRK15481        226 GCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY-H---SV--IPQTTQRWALIRSVSKALG-PDLRLAFVAS---  295 (431)
T ss_pred             CccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC-C---CC--CcCCCCCEEEEeeeccccC-CCceeEEEeC---
Confidence            9999999999999999999 999999999999875321 1   11  1113458999999999999 9999999754   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++++.....    ....+.+.++|.++..+|+++++    .+++++.++.++++++.+.+.|+ +.+    +.+..
T Consensus       296 ~~~~~~~~~~~~~----~~~~~~s~~~q~a~~~~l~~~~~----~~~l~~~~~~~~~~r~~~~~~L~-~~~----~~~~~  362 (431)
T PRK15481        296 DSATSARLRLRLN----SGTQWVSHLLQDLVYACLTDPEY----QARLAQARLFYAQRRQKLARALQ-QYG----IAIPS  362 (431)
T ss_pred             CHHHHHHHHHHHh----ccccCCCHHHHHHHHHHHhCccH----HHHHHHHHHHHHHHHHHHHHHHH-HcC----Ccccc
Confidence            7786666643322    12235678889999999988654    45678899999999999999998 776    46667


Q ss_pred             CCcceeeecCCC---HHHHHHhhhcCcEEEcCCC-----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          353 RQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       353 ~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g-----------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      |.+|+|+|+.+.   .++++.+. ++||.+.||.           |||++..+++++++++++|+++++
T Consensus       363 p~gg~f~~~~l~~~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        363 PGDGLNLWLPLDTDSQATALTLA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN  430 (431)
T ss_pred             CCCeEEEEEECCCCHHHHHHHHH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence            889999999773   34556665 4799998851           999998789999999999999875

>PLN02368 alanine transaminase

Probab=100.00  E-value=3e-42  Score=327.76  Aligned_cols=343  Identities=15%  Similarity=0.124  Sum_probs=252.6

Q ss_pred             CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCC-----Cc----------------c-----cccHHHHHHHHH
Q 015283           12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEE-----LQ----------------P-----YVLDVVKKAENL   63 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~-----~~----------------~-----~~~~~v~~a~~~   63 (410)
                      ++..++...+..+..+..+  ....++|+|++|+| |..     ++                |     ..++.+.++...
T Consensus        14 ~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~P-d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~   92 (407)
T PLN02368         14 NVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNP-HALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHY   92 (407)
T ss_pred             HHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCCh-hHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHH
Confidence            3444555545444433332  23458999999998 211     01                1     124556566544


Q ss_pred             hh-ccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcch
Q 015283           64 ML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNH  141 (410)
Q Consensus        64 ~~-~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~  141 (410)
                      .. .......|++..|.++||+++++++.+.+|..+++++|++  |+|+++++..++  ...+ .+||.|++++|+|+.|
T Consensus        93 l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~--~~l~~~pGd~Vli~~P~Y~~y  168 (407)
T PLN02368         93 LSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFL--TDGASKGVMQIL--NAVIRGEKDGVLVPVPQYPLY  168 (407)
T ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--cccHHHHHHHHH--HHHcCCCCCEEEEeCCCCccH
Confidence            32 2222378999999999999999999887788888999999  999999999873  3345 5999999999999999


Q ss_pred             hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283          142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF  218 (410)
Q Consensus       142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~  218 (410)
                      ...++..|++++.+++.++++|.+|++.+++.+++.   ..+++++++++||||||.+++.+++++|+++|++||++||+
T Consensus       169 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~  248 (407)
T PLN02368        169 SATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG  248 (407)
T ss_pred             HHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence            999999999999999866667899999999988641   12567788899999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCchhHhHHHhh-------cCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283          219 DVAYQGFASGSLDNDASSVRLFAT-------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARP  290 (410)
Q Consensus       219 Deay~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~  290 (410)
                      ||+|.++.+++. ....++..+..       ..+++|+++||||.| +++|||+||+++...++++++++...    ...
T Consensus       249 DE~Y~~l~y~~~-~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~----~~~  323 (407)
T PLN02368        249 DEVYQQNIYQDE-RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKV----ASI  323 (407)
T ss_pred             EccccccccCCC-CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHH----hcc
Confidence            999999987531 11223222211       134899999999998 89999999984211466765555442    222


Q ss_pred             cccCCChhHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C
Q 015283          291 MYSNPPVHGARIVANVVGNPA----LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N  364 (410)
Q Consensus       291 ~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~  364 (410)
                       ..+++.++|.++..+|++..    ....|.++++++++.++++++.+.+.|. +++.   +.+..|++++|+|+++  .
T Consensus       324 -~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~-~~~g---~~~~~P~Gafy~~~~i~lp  398 (407)
T PLN02368        324 -ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFN-SCKN---VVCNFTEGAMYSFPQIKLP  398 (407)
T ss_pred             -cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC---eEeCCCCeeeEeccCCCCC
Confidence             23577888999988887542    1122445556788999999999999999 8731   5778899999999754  4


Q ss_pred             HHHHH
Q 015283          365 KAQSD  369 (410)
Q Consensus       365 ~~~~~  369 (410)
                      .+.++
T Consensus       399 ~~~~~  403 (407)
T PLN02368        399 PKAIE  403 (407)
T ss_pred             HHHHH
Confidence            44443

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=4.8e-43  Score=332.99  Aligned_cols=345  Identities=20%  Similarity=0.244  Sum_probs=272.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHH-hhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT  112 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt  112 (410)
                      ++|||+.|.+....+++. ++.+.++..+ .........|++..|.+++|+++++++.+..+..++++ +|++  ++|++
T Consensus         2 ~~I~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~~   78 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPP-PPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGAQ   78 (363)
T ss_dssp             TEEESSSSSTSSTTSSHH-HHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHHH
T ss_pred             CEEEEECCCCCCcccccc-hHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--ecccc
Confidence            589999999955555533 5666666655 33333348899999999999999999886677778888 8988  77777


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC---CcEEEEeCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFILLHGCA  189 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~---~~~~ii~~~p  189 (410)
                      +++..+..++. ..+||.|++++|+|+.|...++..|.+++.+++..++++.+|++.+++.+++.+.   ++.++++++|
T Consensus        79 ~~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p  157 (363)
T PF00155_consen   79 AALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNP  157 (363)
T ss_dssp             HHHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESS
T ss_pred             cchhhhhhccc-ccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccc
Confidence            77777632221 4599999999999999999999999999999987678899999999999987321   3567778999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      +||||.+++.+++++|+++|++||++||+||+|.++.+++  .+............++++++|+||.||++|+|+||+++
T Consensus       158 ~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~  235 (363)
T PF00155_consen  158 NNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGD--PDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA  235 (363)
T ss_dssp             BTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSS--SHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE
T ss_pred             ccccccccccccccchhhhhcccccceeeeeceeccccCC--CccCcccccccccccceeeeeccccccccccccccccc
Confidence            9999999999999999999999999999999999999763  23323234455556799999999999999999999854


Q ss_pred             EeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283          270 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS  349 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~  349 (410)
                         ++++++.+.....    . +.. +...+.++..++.+....   .+++++.+++++++++.+.+.|+ +.+    +.
T Consensus       236 ---~~~~~~~l~~~~~----~-~~~-~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~-~~~----~~  298 (363)
T PF00155_consen  236 ---PPELIERLRRFQR----S-GLS-SSPMQAAAAAALSDPELV---EKWLEELRERLRENRDLLREALE-EIG----IT  298 (363)
T ss_dssp             ---EHHHHHHHHHHHH----H-TTS-SHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-HTT----SE
T ss_pred             ---hhhhhhhhhhccc----c-ccc-cchhhHHHHHhhhccccc---ccccccchhhHHHHHHHHHHHHH-Hhh----hh
Confidence               7776666554332    2 222 777777777777765432   33678999999999999999998 776    57


Q ss_pred             cccCCcceeeecCCC----HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHH
Q 015283          350 FILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAI  402 (410)
Q Consensus       350 ~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l  402 (410)
                      +..+.+++|.|+.++    .++.++|++++||.+.|+.        ||+++..+++++++++++|
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  299 VLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             EEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             eeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence            788889999998764    3567888886799999963        9999666999999999986

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=4.5e-42  Score=325.70  Aligned_cols=348  Identities=15%  Similarity=0.130  Sum_probs=261.0

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      |.+++++...+.+.+.+++...... ..++++|+.|.|    ..+ .++.+.+++.+....   ..|++..|.+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~p----~~~-~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~i   71 (364)
T PRK07865          1 MPVSARLPDFPWDTLAPAKATAAAH-PDGIVDLSVGTP----VDP-VPPVIQEALAAAADA---PGYPTTAGTPELREAI   71 (364)
T ss_pred             CCccccCCCccHHHHHHHHHHHHhc-CCCEEEcCCCCC----CCC-CCHHHHHHHHHHHhh---CCCCCccCCHHHHHHH
Confidence            5677788888877666655444332 346899999987    222 257777877665422   5798889999999999


Q ss_pred             HHHhcCCCCCc-ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           87 AELLFGADNSV-LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        87 a~~~~~~~~~~-~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      ++++.+.++.. +++++|++  |+|+++++..+..++ .+.+||.|++++|+|+.|...++..|++++.++.        
T Consensus        72 a~~l~~~~~~~~~~~~~I~i--t~G~~~~i~~~~~~l-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--------  140 (364)
T PRK07865         72 VGWLARRRGVTGLDPAAVLP--VIGSKELVAWLPTLL-GLGPGDVVVIPELAYPTYEVGARLAGATVVRADS--------  140 (364)
T ss_pred             HHHHHHHcCCCCCCcccEEE--ccChHHHHHHHHHHH-cCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC--------
Confidence            99998777776 88999999  999999998863222 1469999999999999999999999998877642        


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH--hhc
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATR  243 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~~~  243 (410)
                       ++++..      .+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.+  .....+...  ...
T Consensus       141 -~~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~  211 (364)
T PRK07865        141 -LTELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDA--EPVSILDPRVCGGD  211 (364)
T ss_pred             -hhhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCC--CCCccccccccCCc
Confidence             222221      256677778999999999999999999999999999999999999887642  111111110  012


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++++++||||.++++|+|+||++.   ++++++++.....    .....++.+.|.++..+|.+.+       +.++.
T Consensus       212 ~~~~i~~~S~SK~~~~~GlRiG~i~~---~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~-------~~~~~  277 (364)
T PRK07865        212 HTGLLAVHSLSKQSNLAGYRAGFVAG---DPALVAELLEVRK----HAGMMVPAPVQAAMVAALGDDA-------HVREQ  277 (364)
T ss_pred             cceEEEEeechhccCCCceeeEEEec---CHHHHHHHHHHHH----hcCCCcCHHHHHHHHHHhCCHH-------HHHHH
Confidence            35899999999999999999999743   7886666554332    1223466778888888887642       34677


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCCC----------eEEecCCC
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLS  391 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~  391 (410)
                      ++.++++++.+.+.|+ +.|    +.+..+++++|+|+.+  +...+.+.++++||.+.||.          ||+++. +
T Consensus       278 ~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~  351 (364)
T PRK07865        278 RERYARRRAVLRPALE-AAG----FRVDHSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-T  351 (364)
T ss_pred             HHHHHHHHHHHHHHHH-HcC----CcccCCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-C
Confidence            8888999999999998 776    4666788899999865  33333444456799998851          999987 7


Q ss_pred             cccHHHHHHHHH
Q 015283          392 LAKCEYLADAII  403 (410)
Q Consensus       392 ~~~i~~~~~~l~  403 (410)
                      ++++++++++|+
T Consensus       352 ~~~~~~~~~~l~  363 (364)
T PRK07865        352 DERIAAAVERLA  363 (364)
T ss_pred             HHHHHHHHHHhh
Confidence            899999999885

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=2.1e-41  Score=324.86  Aligned_cols=337  Identities=16%  Similarity=0.141  Sum_probs=249.9

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .+++++|+.|++    ..+ +++.+.+++.+.+...    ....|.|..|.+++|+++++++.+.   .+++++|++  |
T Consensus        32 ~~~~i~l~~~~~----~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~i--t  101 (402)
T TIGR03542        32 SADIIRLGIGDT----TQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFI--S  101 (402)
T ss_pred             CCCeEEcCCCCC----CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEE--C
Confidence            457899999987    332 3677888777665431    2256988899999999999986332   256899999  9


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC-----------CccceeeecCCCcccChhhHHHHHhcC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV-----------PWSEYRYYDPKTVGLDFEGMIADIKAA  177 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~d~~~l~~~i~~~  177 (410)
                      +|+++++..+   ...+.+||+|++++|+|..|...++..|+           +++.+++.+++++.+|++.      . 
T Consensus       102 ~Ga~~al~~l---~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~-  171 (402)
T TIGR03542       102 DGAKCDVFRL---QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------E-  171 (402)
T ss_pred             CCcHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------c-
Confidence            9999999875   33467999999999999999999999999           8888887434445555321      1 


Q ss_pred             CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       .+++++++++||||||.++|.+++++|+++|++|+++||+||+|.+|.+++.  ...++..+....+++++++||||.|
T Consensus       172 -~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~  248 (402)
T TIGR03542       172 -PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPGAKECAIEFRSFSKTA  248 (402)
T ss_pred             -CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCCCcccEEEEecCcccc
Confidence             2566777789999999999999999999999999999999999999886421  1112212111235789999999999


Q ss_pred             cccCCCcceEEEEeCCchhH----HHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLA----ARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK  333 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (410)
                      |+||+|+||+++   +++++    +.+.............+++.++|.++..++.+..+     +...+.++.++++++.
T Consensus       249 g~pGlRiG~~i~---~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~  320 (402)
T TIGR03542       249 GFTGVRLGWTVV---PKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL-----QPILEAISYYMENARI  320 (402)
T ss_pred             CCCCcceEEEEe---cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch-----hHHHHHHHHHHHHHHH
Confidence            999999999854   66654    11122221111122335677888888888876543     2245667888999999


Q ss_pred             HHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHH
Q 015283          334 LFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYL  398 (410)
Q Consensus       334 l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~  398 (410)
                      +.+.|+ +.+    +.+..+.+++|+|+.+    + .+++..++++.||.+.||.          ||+++. ++++++++
T Consensus       321 ~~~~L~-~~~----~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~  394 (402)
T TIGR03542       321 LRKALE-AAG----FKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVEA  394 (402)
T ss_pred             HHHHHH-hcC----ceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHH
Confidence            999998 765    4666677899999865    2 3567788877799999862          999877 88999999


Q ss_pred             HHHHHHHh
Q 015283          399 ADAIIDSY  406 (410)
Q Consensus       399 ~~~l~~~l  406 (410)
                      +++|+++|
T Consensus       395 l~~l~~~~  402 (402)
T TIGR03542       395 CERIKEAL  402 (402)
T ss_pred             HHHHHhhC
Confidence            99998864

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=2.3e-41  Score=326.06  Aligned_cols=339  Identities=12%  Similarity=0.075  Sum_probs=243.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH-HhcCCCCCc-ccCC--ceEEEecCC
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE-LLFGADNSV-LKEQ--RVATVQGLS  110 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~-~~~~~~~~~-~~~~--~i~~~~t~g  110 (410)
                      ++|+++.|.|    +.++  +....++.+.+..   ..|+++.|..++++++++ |+.+..+.. ..++  +|++  |+|
T Consensus        95 ~~i~l~~g~p----~~~~--~~~~~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~G  163 (521)
T TIGR03801        95 DIISYVIDQL----GFDP--DAFLYEMCDGIIG---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VEG  163 (521)
T ss_pred             HHHhhcCCCC----CCCC--CHHHHHHHHHhhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence            4689999998    5552  3444555554422   358777888888888885 544443322 2333  7988  999


Q ss_pred             hhhHHHHHHHHHH---HhCCCCEEEEcCCCCcchhhhhhhC--CCCccceeeecCCC-----cccChhhHHHHHhcCCCC
Q 015283          111 GTGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFNDA--RVPWSEYRYYDPKT-----VGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       111 gt~a~~~~~~~~~---~~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~-----~~~d~~~l~~~i~~~~~~  180 (410)
                      +++++..++..+.   .+.|||+|+++.|+|+.|...++..  |.+++.++..++++     |.+|.+++++.+.+   +
T Consensus       164 at~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~---~  240 (521)
T TIGR03801       164 GTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP---S  240 (521)
T ss_pred             HHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC---C
Confidence            9999998754321   3669999999999999999987765  66777777643333     88999999887654   6


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      +++++++||+||||.++|.+++++|+++|++|  +++||+||+|..|.+.     ..++...  ..+++|+++||||.||
T Consensus       241 ~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~sl~~~--~~~~vI~v~SfSK~fg  313 (521)
T TIGR03801       241 IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-----FRSLFAE--LPYNTIGVYSFSKYFG  313 (521)
T ss_pred             CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-----ccchhhh--CCCCEEEEEcchhhcc
Confidence            77788889999999999999999999999986  9999999999988742     1122121  2358999999999999


Q ss_pred             ccCCCcceEEEEeCCchhHHHHH--------------------------------HHHHhhccCcccCCChhHHH--H--
Q 015283          259 LYAERIGAMNVVCSSSDLAARVK--------------------------------SQLKRLARPMYSNPPVHGAR--I--  302 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~--~--  302 (410)
                      ++|||+||++  ..++++.+++.                                ...+.....++.+.+...|.  +  
T Consensus       314 ~~G~RlG~i~--~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~  391 (521)
T TIGR03801       314 ATGWRLGTIA--LHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALF  391 (521)
T ss_pred             Cchhhhhhhh--cCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHH
Confidence            9999999984  34333322222                                11122333333444444443  3  


Q ss_pred             -HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------------
Q 015283          303 -VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------------  364 (410)
Q Consensus       303 -a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------------  364 (410)
                       +..++...      .++.++.++.++++++.+.+.|. - .    +...++++++|+|+++.                 
T Consensus       392 a~~all~~~------~~y~~~~~~~~~~R~~~l~~~Lg-~-~----~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~  459 (521)
T TIGR03801       392 SLFALMDKE------NAYKAETKDICRRREKLLFRGLG-L-P----LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKK  459 (521)
T ss_pred             HHHHHhccc------hhHHHHHHHHHHHHHHHHHHhcC-C-C----CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhc
Confidence             33444432      23457888899999999888764 1 1    23456889999998652                 


Q ss_pred             ----HHHHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          365 ----KAQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       365 ----~~~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                          .+++.+|+++.||.+.||.         |||+++++++++.++.++|++++++
T Consensus       460 ~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~  516 (521)
T TIGR03801       460 NYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDE  516 (521)
T ss_pred             cCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence                2457789999999999983         9999987999999999999998865

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-40  Score=317.15  Aligned_cols=333  Identities=16%  Similarity=0.208  Sum_probs=249.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccCcCCcccHHHHHHHHHHhcCCC--CCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGAD--NSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~aia~~~~~~~--~~~~~~~~i~~~~t~g  110 (410)
                      +.+++|+.|++    ..+ +++.+.+++.+.+.... ...| |..|.++||+++++++.+.+  +..+++++|++  |+|
T Consensus        28 ~~~~~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~G   99 (374)
T PRK02610         28 IQLDRLDTNEF----PYD-LPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISV--GNG   99 (374)
T ss_pred             cceeEecCCCC----CCC-CCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEE--cCC
Confidence            35789999987    333 37889999887765431 2568 45799999999999987665  46688999999  999


Q ss_pred             hhhHHHHHHHHHHHhCCCC-EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-CCCcEEEEeCC
Q 015283          111 GTGSLRLAAALIERYFPGA-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHGC  188 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~~ii~~~  188 (410)
                      +++++..+  +...+.+|| .|++++|+|+.|...++..|++++.+++. ++++++|++.+++.+.+. ..+++++++++
T Consensus       100 a~~al~~~--~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~  176 (374)
T PRK02610        100 SDELIRSL--LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVH  176 (374)
T ss_pred             hHHHHHHH--HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeC
Confidence            99999876  334456775 89999999999999999999999999873 446899999999888631 12567777789


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      ||||||.+++.+++++++++|  ++++||+||+|.+|.+.   .   .+.. ....+++++++||||.+|+||+|+||++
T Consensus       177 P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~---~---~~~~-~~~~~~~ivi~SfSK~~g~~GlRiG~~v  247 (374)
T PRK02610        177 PNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT---T---LVGE-LAQHPNWVILRTFSKAFRLAAHRVGYAI  247 (374)
T ss_pred             CCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc---c---hHHH-HhcCCCEEEEEecchhccCcccceeeee
Confidence            999999999999999999887  49999999999988632   1   1212 2234578999999999999999999984


Q ss_pred             EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                      .   ++++++++...    ..  ..+.+.++|.++..++.+.+      .+.+..++.++ .++.+.+.|+ .++.   +
T Consensus       248 ~---~~~l~~~l~~~----~~--~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~-~r~~l~~~L~-~~~~---~  307 (374)
T PRK02610        248 G---HPELIAVLEKV----RL--PYNLPSFSQLAAQLALEHRQ------ELLAAIPEILQ-ERDRLYQALQ-ELPQ---L  307 (374)
T ss_pred             c---CHHHHHHHHHh----cC--CCCCCHHHHHHHHHHhcCHH------HHHHHHHHHHH-HHHHHHHHHH-hCCC---c
Confidence            4   77766665442    21  22457788888888887542      22334444444 4677788887 6631   3


Q ss_pred             ccccCCcceeeecCC----CHHHHHHhhhcCcEEEcCCC---eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          349 SFILRQIGMFSFTGL----NKAQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       349 ~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~~g---Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .. .+++|+|+|+.+    +...+.+.++++||.+.++.   ||+++.  .+++++++++|+++++++
T Consensus       308 ~~-~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~l~~~  372 (374)
T PRK02610        308 RV-WPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAALTQL  372 (374)
T ss_pred             Ee-CCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence            43 477889999865    33334334456799998753   999875  567899999999998765

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-40  Score=317.56  Aligned_cols=338  Identities=19%  Similarity=0.233  Sum_probs=262.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ..+++|+.|.|    ..+ .++.+.+++.+.....  ....|.+..|.+++|+++++++...++..+++++|++  |+|+
T Consensus        33 ~~~~~l~~g~p----~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G~  105 (394)
T PRK06836         33 DNVFDFSLGNP----SVP-PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCGA  105 (394)
T ss_pred             CCeEEecCcCC----CCC-CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCCh
Confidence            46799999876    333 3688888887765432  1367988899999999999999877777788999999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++..+..  ..+.+||.|++++|+|..+...++..|++++.+++. ++++.+|++++++.+++   +++++++++|+|
T Consensus       106 ~~al~~~~~--~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~~~~---~~~~v~~~~p~N  179 (394)
T PRK06836        106 AGALNVALK--AILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTD-TDTFQPDLDALEAAITP---KTKAVIINSPNN  179 (394)
T ss_pred             HHHHHHHHH--HhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecC-CccCcCCHHHHHhhcCc---CceEEEEeCCCC
Confidence            999998743  336799999999999999999999999999999984 34578999999999865   567777889999


Q ss_pred             CCCCCCCHHHHHHHHHHHHH------cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283          192 PTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~------~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      |||.++|.+++++|+++|++      ||++||+||+|.++.+++.  ....   .....+++++++||||.|++||+|+|
T Consensus       180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~---~~~~~~~~i~~~S~SK~~~~pGlRiG  254 (394)
T PRK06836        180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPY---IFKYYDNSIVVYSFSKSLSLPGERIG  254 (394)
T ss_pred             CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCC---hHHccCcEEEEecchhhccCcceeeE
Confidence            99999999999999999999      8999999999999886421  1111   12234689999999999999999999


Q ss_pred             eEEEEeCCchhHH--HHHHHHHhhccC-cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          266 AMNVVCSSSDLAA--RVKSQLKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       266 ~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      |+++   +++..+  .+...+....+. .+.+++...|.++..++.+..           .++.++++++.+.+.|+ +.
T Consensus       255 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----------~~~~~~~~r~~l~~~L~-~~  319 (394)
T PRK06836        255 YIAV---NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV-----------DVSIYKRNRDLLYDGLT-EL  319 (394)
T ss_pred             EEec---CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH-----------HHHHHHHHHHHHHHHHH-hC
Confidence            9854   555322  223322222221 123567778888888887631           24567778888999998 77


Q ss_pred             CCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          343 KSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       343 g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |    +.+..+.+|+|+|+.+   +...+.+.++++||.+.||      +  ||+++. +++++++++++|+++++..
T Consensus       320 g----~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~  392 (394)
T PRK06836        320 G----FECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY  392 (394)
T ss_pred             C----CEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            6    4667788899999854   3333334445679999997      2  999985 9999999999999998764

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=1.1e-40  Score=315.06  Aligned_cols=334  Identities=14%  Similarity=0.127  Sum_probs=249.2

Q ss_pred             CcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc-c
Q 015283           20 PILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-L   98 (410)
Q Consensus        20 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~-~   98 (410)
                      ++.+.+....+ ..+.+++|+.|.|    ..+ .++.+.+++.+...   ...|++..|.+++|+++++++...++.. +
T Consensus         8 ~~~~~~~~~~~-~~~~~i~l~~~~p----~~~-~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~   78 (357)
T TIGR03539         8 SLAPYKAKAAS-HPDGIVDLSVGTP----VDP-VPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGL   78 (357)
T ss_pred             HHHHHHHHhhh-CCCCeEEccCCCC----CCC-CCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCC
Confidence            34444444433 3356899999987    233 25778888776542   2679889999999999999998777876 8


Q ss_pred             cCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283           99 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus        99 ~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      ++++|++  |+|+++++..+..++ .+.+||.|++++|+|+.+...++..|++++.++         +++.+.    .  
T Consensus        79 ~~~~I~i--t~G~~~~i~~~~~~l-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~----~--  140 (357)
T TIGR03539        79 DPTAVLP--VIGTKELVAWLPTLL-GLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD----P--  140 (357)
T ss_pred             CcCeEEE--ccChHHHHHHHHHHH-cCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC----c--
Confidence            8999999  999999998863221 146999999999999999998888998887763         222221    1  


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH--hhcCCcEEEEeccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKN  256 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~  256 (410)
                      .+++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++.  ....+...  ....+++++++||||.
T Consensus       141 ~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~  218 (357)
T TIGR03539       141 VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR--PVSILDPRVCGGDHTGLLAVHSLSKR  218 (357)
T ss_pred             cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC--CccceecccCCCccccEEEEeccccc
Confidence            2567777789999999999999999999999999999999999998876421  11111000  0123579999999999


Q ss_pred             ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          257 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       257 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      |+++|+|+||++.   ++++++++....    .....+++..+|.++..+|.+..       +.++.++.++++++.+.+
T Consensus       219 ~~~~G~R~G~~i~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~  284 (357)
T TIGR03539       219 SNLAGYRAGFVAG---DPALVAELLTVR----KHAGLMVPAPVQAAMVAALGDDG-------HVAEQKARYAARRAQLKP  284 (357)
T ss_pred             cCCCceeEEEEec---CHHHHHHHHHHH----hhcccCCCHHHHHHHHHHcCCHH-------HHHHHHHHHHHHHHHHHH
Confidence            9999999999843   778666654432    22223567778888888887632       345678888999999999


Q ss_pred             HhhhccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHH
Q 015283          337 SLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAI  402 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l  402 (410)
                      .|+ +.|    +.+..+.+++|+|+..  +...+.+.++++||.+.|+.          ||+++. +++++++++++|
T Consensus       285 ~L~-~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l  356 (357)
T TIGR03539       285 ALE-KAG----FRIDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL  356 (357)
T ss_pred             HHH-HcC----CCCcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence            998 776    4667788999999865  33334444556799998862          999987 788999998876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=8.3e-41  Score=315.78  Aligned_cols=322  Identities=14%  Similarity=0.145  Sum_probs=248.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|+|+.|++    .+++ ++.+++++.+....  ...| |..|.+++|+++++++.      +++++|++  ++|+++
T Consensus        29 ~~~i~l~~nen----~~~~-~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~~------~~~~~I~v--t~Gs~e   92 (366)
T PRK01533         29 HSFVKLASNEN----PFGC-SPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKLH------VKMEQVLC--GSGLDE   92 (366)
T ss_pred             CceEEeCCCCC----CCCC-CHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHhC------CCcceEEE--CCCHHH
Confidence            57899999987    3333 68888888776543  2446 67899999999999962      34889999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.++..  ..+.+||+|++++|+|+.|...+...|.+++.+++.   ++.+|++.+++.+.+   +++++++++|||||
T Consensus        93 ~i~~~~~--~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~---~~~~v~i~~P~NPT  164 (366)
T PRK01533         93 VIQIISR--AVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDN---DTKIVWICNPNNPT  164 (366)
T ss_pred             HHHHHHH--HhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCc---CCcEEEEeCCCCCC
Confidence            9998743  336799999999999999999999999999999872   456899999988864   56677779999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++|+++|++++ ++|+||+|.+|.+.+   +..+........+++|+++||||.||++|+|+||+++   +
T Consensus       165 G~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~---~  237 (366)
T PRK01533        165 GTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAK---DFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG---H  237 (366)
T ss_pred             CCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccc---cCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC---C
Confidence            99999999999999998876 577799999887532   1111122334557899999999999999999999844   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++++...    . . ..+.+.++|.++..+|++.++       .++.++.++++++++.+.++ ..|    +.+.++
T Consensus       238 ~~~~~~l~~~----~-~-~~~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~r~~~~~~l~-~~g----~~~~~~  299 (366)
T PRK01533        238 EELIEKLNVV----R-L-PFNVSSLAQKAATIAFGDDEF-------IEEIVRVNTEGLRQYESFCK-ENE----IPFYQS  299 (366)
T ss_pred             HHHHHHHHHh----c-C-CCCcCHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHHHHH-hCC----CccCCC
Confidence            7866665442    2 1 236788889999888887543       24556667777777888887 776    455666


Q ss_pred             CcceeeecCC-CH-HHHHHhhhcCcEEEcCCC---eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          354 QIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       354 ~~~~~~~~~~-~~-~~~~~ll~~~gi~v~~~g---Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      + +.|+|+.+ +. ++...++ ++||.|++..   ||+++  +.++.+.++++|+++++.
T Consensus       300 ~-~nf~~~~~~~~~~~~~~l~-~~GI~Vr~~~~~iRis~~--~~~~~~~l~~al~~~~~~  355 (366)
T PRK01533        300 Q-TNFIFLPVENGGEIYEACA-HAGFIIRPFPNGVRITVG--TREQNEGVISVLQQHFEN  355 (366)
T ss_pred             c-CcEEEEeCCCHHHHHHHHH-HCCcEEccCCCceEEeCC--CHHHHHHHHHHHHHHHHh
Confidence            4 67888876 33 3445555 5799998753   99985  579999999999998764

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=3e-40  Score=336.71  Aligned_cols=346  Identities=11%  Similarity=0.079  Sum_probs=258.0

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-CceEEEecCCh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSG  111 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~gg  111 (410)
                      ++++|+|+.|++    ..+ +|+.+++++.+.+...   .+  ..|.+++++++++++.+.+|+..++ ++|++  ++|+
T Consensus       696 g~~vI~LsinE~----d~p-pPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIv--t~Gs  763 (1082)
T PLN02672        696 ESSLIHMDVDES----FLP-VPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVY--GDTS  763 (1082)
T ss_pred             CCCEEEEeCCCC----CCC-CCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEE--eCCH
Confidence            468899999997    433 3789999988766432   12  2356788999999998888887754 57888  8888


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC-
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH-  190 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~-  190 (410)
                      ++++..+  +...+.+||.|+++.|+|+.|...++..|++++.+|+.+++++.+|++.+++.+++.  ....+++++|+ 
T Consensus       764 ~elL~ll--l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~--~~~~I~L~nPnh  839 (1082)
T PLN02672        764 LALFNKL--VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV--KKPWVYISGPTI  839 (1082)
T ss_pred             HHHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC--CCCEEEEECcCC
Confidence            8888876  334467999999999999999999999999999999965568899999999988641  23345568886 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh---hc---CCcEEEEecccccccccCCCc
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA---TR---GMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~---~~---~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      ||||.+++.+++++|+++|++||++||+||+|.++.+.+.....+++....   ..   ..++++++||||.++++|+|+
T Consensus       840 NPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRI  919 (1082)
T PLN02672        840 NPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEF  919 (1082)
T ss_pred             CCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHh
Confidence            999999999999999999999999999999999888753111111221111   11   137999999999999999999


Q ss_pred             ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      ||+  +++++++++.+..... . . ....+...++.++..++.+..  ..|.+++++.++.++++++++.+.|+ +.| 
T Consensus       920 Gyl--Iap~~eLi~~l~~~~~-~-s-~~~~~~q~Aaaaalall~~~~--~~~~~~l~e~r~~Lk~rRd~L~e~L~-~~G-  990 (1082)
T PLN02672        920 GFL--ALNDSVLIDAFHSAPG-L-S-RPHSTLKYTIKKLLGLKNQKS--SDLLDGVAEQKKILKSRAERLKETLE-ACG-  990 (1082)
T ss_pred             eeE--EeCCHHHHHHHHHhhh-h-c-CCCcHHHHHHHHHHHHHhccC--cHHHHHHHHHHHHHHHHHHHHHHHHH-HCC-
Confidence            998  4445556666654211 1 0 111112222222233332111  22567788999999999999999999 876 


Q ss_pred             CCCcccccCCcceeeecCC---------------------C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCccc
Q 015283          345 GKDWSFILRQIGMFSFTGL---------------------N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAK  394 (410)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~---------------------~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~  394 (410)
                         +.+.+|++++|+|+.+                     + .+++++++++.||.+.||.        ||+++. ++++
T Consensus       991 ---i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~~e~ 1066 (1082)
T PLN02672        991 ---WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-EDSE 1066 (1082)
T ss_pred             ---CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-CHHH
Confidence               5778899999999732                     2 3457788887899999972        999987 8889


Q ss_pred             HHHHHHHHHHHhh
Q 015283          395 CEYLADAIIDSYH  407 (410)
Q Consensus       395 i~~~~~~l~~~l~  407 (410)
                      +++++++|++.++
T Consensus      1067 LeeALerL~kf~~ 1079 (1082)
T PLN02672       1067 FDRALKAIARFKE 1079 (1082)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998754

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-39  Score=308.69  Aligned_cols=332  Identities=17%  Similarity=0.190  Sum_probs=248.1

Q ss_pred             CCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc
Q 015283           18 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV   97 (410)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~   97 (410)
                      ..++.++++++.. ...++|+|+.|++    ..++ ++.+.+++.+....  ...|+ ..|.++||+++++++.      
T Consensus        15 ~~~~~~~~~~~~~-~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~~------   79 (357)
T PRK14809         15 GRGIEEVARELGL-DPDDLVKLSSNEN----PHGP-SPAAVEAIREAAER--VHSYP-KASHADLTAALADRWD------   79 (357)
T ss_pred             CCCHHHHHHHhCC-CccceeEecCCCC----CCCC-CHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHhC------
Confidence            3334444444433 2357999999987    3332 57788888776543  36785 5789999999999962      


Q ss_pred             ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283           98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA  177 (410)
Q Consensus        98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~  177 (410)
                      +++++|++  |+|+++++.++..  ..+.+||.|++++|+|+.|.......|.+++.+++..++++.+|.+.+.+...  
T Consensus        80 ~~~~~I~i--t~G~~~al~~~~~--~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~--  153 (357)
T PRK14809         80 VSPEQVWL--ANGGDGALDYLAR--AMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD--  153 (357)
T ss_pred             CCcceEEE--CCCHHHHHHHHHH--HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc--
Confidence            35889999  9999999998743  33679999999999999998888888999999988544567778777766542  


Q ss_pred             CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                        +++++++++||||||.++|.+++++|+++|++ +++||+||+|.+|.+.   ..  .. ......+++++++||||.|
T Consensus       154 --~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~---~~--~~-~~~~~~~~vi~~~SfSK~~  224 (357)
T PRK14809        154 --GERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAER---PS--AV-ALVEERDDVAVLRTFSKAY  224 (357)
T ss_pred             --CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCC---ch--hH-HHHhhCCCEEEEecchhHh
Confidence              34566678999999999999999999999975 7899999999998853   11  11 2234456899999999999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      |+||+|+||+++   ++++++++..    ..  ...+.+.+++.++...|.+.+       ++++.++.++++++.+.+.
T Consensus       225 ~~~GlRiG~~~~---~~~~~~~~~~----~~--~~~~~~~~~~~~a~~~l~~~~-------~~~~~~~~~~~~r~~l~~~  288 (357)
T PRK14809        225 GLAGLRLGYAVV---PEEWADAYAR----VN--TPFAASELACRAGLAALDDDE-------HVERTVETARWAREYIREE  288 (357)
T ss_pred             cCcchhheeeec---CHHHHHHHHH----hC--CCCCCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHH
Confidence            999999999854   7776555543    22  123466777888877777532       3456777888888888888


Q ss_pred             hhhccCCCCCcccccCCcceeeecCC-C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          338 LSAKDKSGKDWSFILRQIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      |. ...        .+.+|+|+|+.+ + .++... ++++||.+.||.        ||+++  +.+++++++++|+++++
T Consensus       289 L~-~~~--------~~~~g~f~~~~~~~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        289 LD-APT--------WESAGNFVLAEVGDASAVAEA-AQERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA  356 (357)
T ss_pred             hc-Ccc--------CCCCCCEEEEECCCHHHHHHH-HHHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence            87 432        145688989876 3 344555 456799999873        99985  46899999999999875

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=7.8e-40  Score=315.93  Aligned_cols=346  Identities=16%  Similarity=0.095  Sum_probs=247.9

Q ss_pred             cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           31 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        31 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      ..++++|+|+.|.| +  ..++..+.+.+++.+.+...    ....|++..|.++||+++++++.+.+|..+++++|++ 
T Consensus        27 ~~~~~~i~l~~g~p-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~i-  102 (416)
T PRK09440         27 LRTPGAIMLGGGNP-A--HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL-  102 (416)
T ss_pred             hcCCCceeccCCCC-C--ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE-
Confidence            33467899999987 1  12222356677776655331    2257999999999999999999877788888999999 


Q ss_pred             ecCChhhHHHHHHHHHHHhC-----CCCEEEE-cCCCCcchhhhhhhCC----CCccceeeecCC-CcccChhhHHHHHh
Q 015283          107 QGLSGTGSLRLAAALIERYF-----PGAKVLI-SSPTWGNHKNIFNDAR----VPWSEYRYYDPK-TVGLDFEGMIADIK  175 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~-----~gd~Vl~-~~p~y~~~~~~~~~~g----~~~~~v~~~~~~-~~~~d~~~l~~~i~  175 (410)
                       |+|+++++.++..++  +.     +||.|++ .+|+|+.|...+...+    .....+++.+++ .+.+|++.++  +.
T Consensus       103 -t~Ga~~al~~~~~~l--~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~  177 (416)
T PRK09440        103 -TNGSQSAFFYLFNLF--AGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID  177 (416)
T ss_pred             -ccChHHHHHHHHHHH--hccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC
Confidence             999999999985444  42     5899999 6999999987554333    222223332111 4678988887  22


Q ss_pred             cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283          176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK  255 (410)
Q Consensus       176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  255 (410)
                         +++.++++++||||||.++|.+++++|+++|++|+++||+||+|..+...   .......  ....+++|+++||||
T Consensus       178 ---~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~---~~~~~~~--~~~~~~vI~~~SfSK  249 (416)
T PRK09440        178 ---EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG---IIFSEAT--PLWNPNIILCMSLSK  249 (416)
T ss_pred             ---CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC---cchhhcC--ccccCCeEEEecccc
Confidence               35678888999999999999999999999999999999999999754321   0000100  011468999999999


Q ss_pred             cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH-HHHHHHHHHHHH
Q 015283          256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM-MAGRIKNVRQKL  334 (410)
Q Consensus       256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~l  334 (410)
                      . ++||+|+||+++   ++++++++.....    ....+++.++|.++..+|.++++.    ++..+ .++.++++++.+
T Consensus       250 ~-~~pGlRiG~~i~---~~~l~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~~~~----~~~~~~~~~~~~~r~~~~  317 (416)
T PRK09440        250 L-GLPGVRCGIVIA---DEEIIEALSNMNG----IISLAPGRLGPAIAAEMIESGDLL----RLSETVIRPFYRQKVQLA  317 (416)
T ss_pred             c-CCCcceEEEEeC---CHHHHHHHHHHHH----HhccCCCcHHHHHHHHHhccchHH----HHHHHHHHHHHHHHHHHH
Confidence            6 899999999854   7786666554332    223367888999999999887653    33333 567777788877


Q ss_pred             HHHhhhcc-CCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC---------------C--eEEecCCC
Q 015283          335 FDSLSAKD-KSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD---------------G--RISLAGLS  391 (410)
Q Consensus       335 ~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~---------------g--Ris~~~~~  391 (410)
                      .+.|. +. +. ..+.+..|++|+|+|+.+     +...+.+.++++||.+.||               +  |||++. +
T Consensus       318 ~~~L~-~~l~~-~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~  394 (416)
T PRK09440        318 IALLR-RYLPD-EPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-D  394 (416)
T ss_pred             HHHHH-Hhccc-CCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC-C
Confidence            77776 43 10 113556788999999854     2333333445679999873               2  899987 8


Q ss_pred             cccHHHHHHHHHHHhhh
Q 015283          392 LAKCEYLADAIIDSYHN  408 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~~  408 (410)
                      ++++++++++|++++++
T Consensus       395 ~~~l~~~i~~l~~~~~~  411 (416)
T PRK09440        395 DEEIEKGIAILAEEVEK  411 (416)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            89999999999999865

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-39  Score=289.90  Aligned_cols=316  Identities=15%  Similarity=0.206  Sum_probs=262.9

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCC--CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-h
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D  147 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~--~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~  147 (410)
                      ..|.+-.|.+.+|+++|+++....+  ...+|+++++  ++|+|+++++++.++  ..|||..++|.|.|+++...++ +
T Consensus       115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l~fcL--adpgdafLvPtPyY~gfdrdl~~r  190 (471)
T KOG0256|consen  115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETLMFCL--ADPGDAFLVPTPYYPGFDRDLRWR  190 (471)
T ss_pred             hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHHHHHh--cCCCceeeecCCCCCcccccceec
Confidence            5577788999999999999854433  4678899988  999999999985444  5599999999999999987777 7


Q ss_pred             CCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC
Q 015283          148 ARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG  224 (410)
Q Consensus       148 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~  224 (410)
                      .|.++++|.+...++++++.+.+|+++++.   ..+.+.+++.||+||.|..++++++..++++|.++++.+|+||+|++
T Consensus       191 Tgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~  270 (471)
T KOG0256|consen  191 TGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAG  270 (471)
T ss_pred             cCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcc
Confidence            899999999988899999999999888663   45677888899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHhHHHhh----cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHH
Q 015283          225 FASGSLDNDASSVRLFAT----RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA  300 (410)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (410)
                      .+|+.  .+..++.....    ..+.+.+++|+||.||+||+|+|.+  .+.++++....    .++.  .+...+...|
T Consensus       271 sVF~~--~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGvi--YS~ne~VvsaA----~kms--sf~~vSs~tQ  340 (471)
T KOG0256|consen  271 SVFDK--SEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVI--YSNNEDVVSAA----TKMS--SFGLVSSQTQ  340 (471)
T ss_pred             cccCc--cCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEE--EecChHHHHHH----HHHh--hccCCcHHHH
Confidence            98864  24444444332    3458999999999999999999998  56677744433    3222  3556888899


Q ss_pred             HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----------CHHHHH
Q 015283          301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----------NKAQSD  369 (410)
Q Consensus       301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  369 (410)
                      ..++.+|+|..+.   ++++++.+++++.+.+++.++|+ ++|    +.+.+.++|+|.|+++           ..++.+
T Consensus       341 ~~la~LLSD~~f~---~~yl~en~~Rl~~rh~~~~~gLk-~lg----I~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~  412 (471)
T KOG0256|consen  341 YLLASLLSDEEFT---REYLRENNKRLRIRHRYIVEGLK-ALG----IPCLKSNAGLFCWVDLRKLLTSLTFEGELELWE  412 (471)
T ss_pred             HHHHHHhchHHHH---HHHHHHHHHHHHHHHHHHHhhHH-hcC----CceeecCCeeEEEEEhHHhcCcCChHHHHHHHH
Confidence            9999999998775   45578999999999999999999 999    5889999999999975           124578


Q ss_pred             HhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          370 NMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       370 ~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +++.+.++.+.||.          |++|+++.++.++-+++||++.+.+
T Consensus       413 ~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~  461 (471)
T KOG0256|consen  413 RILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDS  461 (471)
T ss_pred             HHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence            88887799999983          9999997777777799999998753

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-39  Score=308.79  Aligned_cols=329  Identities=15%  Similarity=0.166  Sum_probs=250.6

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ..++|+.|++    ..+ .++.+.+++.+.+..  .....| |..|.+++|+++++++.+.++..+++++|++  |+|++
T Consensus        27 ~~i~l~~~~~----~~~-~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~   98 (368)
T PRK03317         27 VPVRLNTNEN----PYP-PSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSN   98 (368)
T ss_pred             ceeEecCCCC----CCC-CCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHH
Confidence            4589999987    333 368889888877532  123678 4568999999999999888788888999999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++..+..  ..+.+||.|+++.|+|+.|...++..|.+++.++.  .+++++|++.+++.+.+  .+++++++++|+||
T Consensus        99 ~~l~~~~~--~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NP  172 (368)
T PRK03317         99 EILQQLLQ--AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAE--HRPDVVFLTSPNNP  172 (368)
T ss_pred             HHHHHHHH--HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCC
Confidence            99999843  33679999999999999999999989988888776  45678999999998875  24456667899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|   +++||+||+|.+|.+.+   .. +.....+..+++++++||||.||++|+|+||++.   
T Consensus       173 tG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~---~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~---  242 (368)
T PRK03317        173 TGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSG---TP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA---  242 (368)
T ss_pred             CCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccC---Cc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhC---
Confidence            99999999999997777   68999999999987532   11 2122333445899999999999999999999744   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++.+..    ...  ..+.+.++|.++...|++.+       ...+.+++++++++.+.+.|+ +.|    +.+..
T Consensus       243 ~~~~~~~l~~----~~~--~~~~s~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~  304 (368)
T PRK03317        243 APAVVDALRL----VRL--PYHLSAVTQAAARAALRHAD-------ELLASVAALRAERDRVVAWLR-ELG----LRVAP  304 (368)
T ss_pred             CHHHHHHHHh----cCC--CCCCCHHHHHHHHHHhhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CEeCC
Confidence            7786555443    221  22466778888777776532       123444567788888889998 776    46667


Q ss_pred             CCcceeeecCC-CHH-HHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          353 RQIGMFSFTGL-NKA-QSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       353 ~~~~~~~~~~~-~~~-~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +.++++.|... +.. +.+.++ ++||.+.+.+     ||+++  +.++++.+++.|++++..
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~~~~  364 (368)
T PRK03317        305 SDANFVLFGRFADRHAVWQGLL-DRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEVLAT  364 (368)
T ss_pred             CCCcEEEEeccCCHHHHHHHHH-HCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHHHHH
Confidence            78888888654 333 344554 5799998764     99985  568899999999998754

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=3.4e-39  Score=304.22  Aligned_cols=323  Identities=17%  Similarity=0.168  Sum_probs=245.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +.+++|+.|.+    ..+ .++.+.+++.+.+..  ...|+ ..+.+++|+++++++.      +++++|++  |+|+++
T Consensus        19 ~~~~~l~~~~~----~~~-~p~~~~~a~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~~------~~~~~i~i--t~Ga~~   82 (354)
T PRK06358         19 NMILDFSANIN----PLG-VPESLKQAITENLDK--LVEYP-DPDYLELRKRIASFEQ------LDLENVIL--GNGATE   82 (354)
T ss_pred             cceEEecCCCC----CCC-CCHHHHHHHHHHHHh--hhcCC-CccHHHHHHHHHHHhC------CChhhEEE--CCCHHH
Confidence            45799999886    222 268888888876543  36685 4578999999999972      35899999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++..+..   .+.+ ++|++++|+|+.|...++..|++++.+++.+++++.+| +++++.+..   +++++++++|||||
T Consensus        83 ~l~~~~~---~~~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~---~~~~v~~~~P~NPt  154 (354)
T PRK06358         83 LIFNIVK---VTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE---EIDLVFLCNPNNPT  154 (354)
T ss_pred             HHHHHHH---HhCC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc---CCCEEEEeCCCCCC
Confidence            9998743   2434 78999999999999999999999999998545567888 666666643   46666678999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++|+++|++|+++||+||+|.+|.+.+   ...+........+++++++||||.||++|+|+||+  ++++
T Consensus       155 G~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~---~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~l--v~~~  229 (354)
T PRK06358        155 GQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN---ETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYG--LTSN  229 (354)
T ss_pred             CCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc---cchhHHHhccCCCCEEEEEechhhccCcchhheee--ecCC
Confidence            999999999999999999999999999999998642   11222223344569999999999999999999998  4445


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +.+++.+..    ... . .+.+.++|.++..+|++.+       ++++.++.++++++++.+.|+ +.+.   +.+..+
T Consensus       230 ~~~~~~~~~----~~~-~-~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~~  292 (354)
T PRK06358        230 KNLAEKLLQ----MRE-P-WSINTFADLAGQTLLDDKE-------YIKKTIQWIKEEKDFLYNGLS-EFKG---IKVYKP  292 (354)
T ss_pred             HHHHHHHHH----hCC-C-CcchHHHHHHHHHHhccHH-------HHHHHHHHHHHHHHHHHHHHh-cCCC---cEEcCC
Confidence            665555433    222 2 2456777888888886542       246777888999999999998 7631   455666


Q ss_pred             CcceeeecCC--CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHh
Q 015283          354 QIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       354 ~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      . |.|+|+.+  ..++++++++ +||.+.|+.          ||+++  +.++.+++++.|++++
T Consensus       293 ~-g~f~~~~~~~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        293 S-VNFIFFKLEKPIDLRKELLK-KGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL  353 (354)
T ss_pred             c-ceEEEEEcCchHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence            5 45888876  3445666665 699998862          89985  5789999999998875

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=7.2e-39  Score=302.58  Aligned_cols=338  Identities=14%  Similarity=0.141  Sum_probs=250.2

Q ss_pred             CCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCC
Q 015283           17 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS   96 (410)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~   96 (410)
                      ++.++...++++... ..++++|+.|++    ..+ +|+.+++++.+.+..  ...|+ ..+.+++|+++++++.     
T Consensus         4 ~~~~~~~~~~~~~~~-~~~~i~l~~~~~----~~~-~p~~~~~a~~~~~~~--~~~y~-~~~~~~lr~~ia~~~~-----   69 (356)
T PRK08056          4 HGGNIREAATVLGIS-PDQLLDFSANIN----PLG-MPVSLKRAIIDNLDC--AERYP-DVEYRHLHQALARHHQ-----   69 (356)
T ss_pred             CCccHHHHHHHhCCC-hhhEEEeccccC----CCC-CCHHHHHHHHHHHHh--cccCc-CccHHHHHHHHHHHhC-----
Confidence            566666666555432 346899999987    333 368888888776643  25675 4578999999999962     


Q ss_pred             cccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283           97 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA  176 (410)
Q Consensus        97 ~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~  176 (410)
                       +++++|++  |+|+++++..+..   .+.+|+ +++++|+|..|...++..|.+++.+++.+++++.+| +.+++.+.+
T Consensus        70 -~~~~~i~i--t~Ga~~~l~~~~~---~l~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~  141 (356)
T PRK08056         70 -VPASWILA--GNGETESIFAVVS---GLKPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTP  141 (356)
T ss_pred             -cChhhEEE--CCCHHHHHHHHHH---HhCCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccC
Confidence             34789999  9999999988743   346775 788899999999999999999999998555566666 455555543


Q ss_pred             CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283          177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN  256 (410)
Q Consensus       177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  256 (410)
                         +++++++++||||||.+++.+++++|+++|++++++||+||+|.+|.+.+  ..  .+ ......+++++++||||.
T Consensus       142 ---~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~--~~-~~~~~~~~~i~~~S~SK~  213 (356)
T PRK08056        142 ---DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE--TG--FI-PQLADNPHLWVLRSLTKF  213 (356)
T ss_pred             ---CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc--hH--HH-HHhccCCCEEEEEechhh
Confidence               56677789999999999999999999999999999999999999987532  11  11 122345689999999999


Q ss_pred             ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          257 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       257 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      ||++|+|+||+  ++++++.++++..    ..  ...+++.+++.++..++.+..+       .++.++.++++++++.+
T Consensus       214 ~~~~G~RiG~~--v~~~~~~~~~l~~----~~--~~~~~~~~~~~~a~~~l~~~~~-------~~~~~~~~~~~r~~l~~  278 (356)
T PRK08056        214 YAIPGLRLGYL--VNSDDAAVARMRR----QQ--MPWSINAFAALAGEVILQDRAY-------QQATWQWLAEEGARFYQ  278 (356)
T ss_pred             ccCcchhheee--ecCCHHHHHHHHH----hC--CCCchhHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHH
Confidence            99999999998  4445565455432    21  2234566777777777765433       35778889999999999


Q ss_pred             HhhhccCCCCCcccccCCcceeeecCC--C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHH
Q 015283          337 SLSAKDKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAII  403 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~  403 (410)
                      .|+ +++.   +.+.++ .++|+|+.+  + .++++.+++ +||.+.++.          ||+++  +.++.+.+++.|+
T Consensus       279 ~L~-~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~  350 (356)
T PRK08056        279 ALC-ALPL---LTVWPG-RANYLFLRCERPDIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALR  350 (356)
T ss_pred             HHh-cCCC---cEEcCC-CCcEEEEEcCCChHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHH
Confidence            998 7731   344444 578888865  2 345666665 699998751          99985  5788899999998


Q ss_pred             HHhh
Q 015283          404 DSYH  407 (410)
Q Consensus       404 ~~l~  407 (410)
                      ++++
T Consensus       351 ~~~~  354 (356)
T PRK08056        351 NVLT  354 (356)
T ss_pred             HHHc
Confidence            8764

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.3e-39  Score=305.01  Aligned_cols=319  Identities=15%  Similarity=0.160  Sum_probs=246.2

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .+++|+.|.+    ...+ ++.+.+++.+.+..   ..|.|..|.+++|+++++++.      +++++|++  |+|++++
T Consensus        30 ~~i~l~~n~~----~~~~-~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~~------~~~~~i~~--t~G~~~~   93 (359)
T PRK03158         30 KIVKLASNEN----PYGP-SPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHLG------VDEEQLLF--GAGLDEV   93 (359)
T ss_pred             ceEEecCCCC----CCCC-CHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHhC------CCHHHEEE--CCCHHHH
Confidence            6899999987    2222 67888888776643   345577899999999999973      23789999  9999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                      +..+..  ..+.+||.|++++|+|+.|...+...|.++..+++.   ++.+|++.+++.+.+   +++++++++||||||
T Consensus        94 l~~~~~--~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~---~~~~v~i~~p~NPtG  165 (359)
T PRK03158         94 IQMISR--ALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDE---QTKIVWICNPNNPTG  165 (359)
T ss_pred             HHHHHH--HHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCC---CCCEEEEeCCCCCCC
Confidence            988743  336799999999999999999999999999999983   467899999887764   566677799999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .+++.+++.++++.|+ +|++||+||+|.++.+++....  .+ ...+..+++++++||||.+|++|+|+||+++   ++
T Consensus       166 ~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~--~~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~~  238 (359)
T PRK03158        166 TYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPD--TL-PLLEKYENLIVLRTFSKAYGLAALRVGYGIA---SE  238 (359)
T ss_pred             CCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCccccc--HH-HHHHhcCCEEEEEechHhhcCcchhhehhcC---CH
Confidence            9999999999988875 6999999999999876421111  11 2234556899999999999999999999754   77


Q ss_pred             hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                      ++++++...    .. . .+++.++|.++..+|.+.++       .++.++.++++++.+.+.|+ +.+    +.+. +.
T Consensus       239 ~~~~~~~~~----~~-~-~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~l~-~~~----~~~~-~~  299 (359)
T PRK03158        239 ELIEKLNIA----RP-P-FNTTRIAQYAAIAALEDQAF-------LKECVEKNAEGLEQYYAFCK-EYG----LFYY-PS  299 (359)
T ss_pred             HHHHHHHHh----cC-C-CCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CeeC-CC
Confidence            866665432    22 2 35788888999888876533       34566677888888888888 775    3444 44


Q ss_pred             cceeeecCC--C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHh
Q 015283          355 IGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       355 ~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      .|+|+|+.+  + .++++.+++ +||.+.||.        ||+++  +.+++++++++|++++
T Consensus       300 ~g~~i~~~~~~~~~~~~~~l~~-~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~~  359 (359)
T PRK03158        300 QTNFIFVDTGRDANELFEALLK-KGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKELL  359 (359)
T ss_pred             cCcEEEEECCCCHHHHHHHHHH-CCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHhC
Confidence            578899865  3 345666665 699999962        99986  5889999999998863

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.6e-39  Score=303.21  Aligned_cols=316  Identities=17%  Similarity=0.176  Sum_probs=239.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|+|+.|++    ..++ ++.+.+++.+.+.... ..|+ ..|.+++|+++++++.      +++++|++  |+|+++
T Consensus        24 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~~~-~~y~-~~~~~~lr~aia~~~~------~~~~~I~i--t~G~~~   88 (353)
T PRK05387         24 AKLIKLNTNEN----PYPP-SPKVLEAIRAALGDDL-RLYP-DPNADALRQAIAAYYG------LDPEQVFV--GNGSDE   88 (353)
T ss_pred             cceeeccCCCC----CCCC-CHHHHHHHHHHhhhhh-hcCC-CCcHHHHHHHHHHHhC------CCHHHEEE--cCCHHH
Confidence            46899999987    3332 6888988887665433 6785 4467999999999973      34789999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.+++.  ..+.+||+|++++|+|+.|...++..|++++.+++  .+++.+|++.+++       .+.++++++|||||
T Consensus        89 al~~~~~--~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~-------~~~~v~~~~P~NPt  157 (353)
T PRK05387         89 VLAHAFL--AFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPL--DDDFSIDVEDYLR-------PNGGIIFPNPNAPT  157 (353)
T ss_pred             HHHHHHH--HhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeec--CCCCCCCHHHHHh-------cCCEEEEeCCCCCC
Confidence            9999843  34779999999999999999999999999999988  3457889998863       23456779999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.++|.+++++|+++++  ++++|+||+|.+|...    ...   .+....+++++++||||.+|++|+|+||++.   +
T Consensus       158 G~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~~~---~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~---~  225 (353)
T PRK05387        158 GIALPLAEIERILAANP--DSVVVIDEAYVDFGGE----SAI---PLIDRYPNLLVVQTFSKSRSLAGLRVGFAIG---H  225 (353)
T ss_pred             CCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----chH---HHHhhCCCEEEEEehhHhhcchhhhceeeec---C
Confidence            99999999999988654  8999999999876421    111   2234456899999999999999999999854   7


Q ss_pred             chhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          274 SDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      +++++++...    .... ..+.+..+|.++...+.+.++       .++.+++++++++.+.+.|+ +.|    +.+. 
T Consensus       226 ~~~~~~l~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g----~~~~-  288 (353)
T PRK05387        226 PELIEALNRV----KNSFNSYPLDRLAQAGAIAAIEDEAY-------FEETRAKVIATRERLVEELE-ALG----FEVL-  288 (353)
T ss_pred             HHHHHHHHHh----hccCCCCCcCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CeEC-
Confidence            7766655442    2221 124567788888777775432       35677888999999999998 776    3443 


Q ss_pred             CCcceeeecCC---CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          353 RQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       353 ~~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      +.+++|+|+.+   +. ++.+.+. ++||.+.+.      +  ||+++  +.+++++++++|++++.
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        289 PSKANFVFARHPSHDAAELAAKLR-ERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEILA  352 (353)
T ss_pred             CCcCcEEEEECCCCCHHHHHHHHH-HCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence            45677888754   33 4455654 569998543      1  99986  56899999999999875

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-38  Score=295.90  Aligned_cols=319  Identities=18%  Similarity=0.220  Sum_probs=253.2

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      ++++|+++++    .+++ |+.+++++.+....  .+.| |.....++++++++++..     .++++|++  .+|+++.
T Consensus        23 ~~i~LssNen----P~gp-~~~~~~~~~~~~~~--~~rY-Pd~~~~~l~~a~a~~~~~-----~~~~~V~~--gnGsde~   87 (356)
T COG0079          23 GIIKLSSNEN----PYGP-PPKVIEAIRAALDK--LNRY-PDPDYRELRAALAEYYGV-----VDPENVLV--GNGSDEL   87 (356)
T ss_pred             cceeecCCCC----CCCC-CHHHHHHHHHHHHh--hccC-CCCcHHHHHHHHHHHhCC-----CCcceEEE--cCChHHH
Confidence            6899999886    3332 58888888777652  3778 445889999999999653     23789988  8999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                      +..+.+.  .+.+||+|+++.|+|..|...++..|++++.++..  + |.+|++.+.+.+.+   ++.++++||||||||
T Consensus        88 i~~l~~~--~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~--~-~~~d~~~~~~~~~~---~~~lv~i~nPNNPTG  159 (356)
T COG0079          88 IELLVRA--FVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLK--E-FRLDLDAILAAIRD---KTKLVFLCNPNNPTG  159 (356)
T ss_pred             HHHHHHH--hhcCCCEEEEcCCChHHHHHHHHhcCCeEEEeccc--c-cccCHHHHHHhhhc---CCCEEEEeCCCCCCC
Confidence            9997433  36699999999999999999999999999999984  3 88999999998885   677788899999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      ..++.++++++++.+.+ +.+||+||||.+|...       +...+....+++++++||||+||++|+|+||++.   ++
T Consensus       160 ~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~-------~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia---~~  228 (356)
T COG0079         160 TLLPREELRALLEALPE-GGLVVIDEAYIEFSPE-------SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA---NP  228 (356)
T ss_pred             CCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc-------hhhhhccCCCCEEEEEecHHhhhcchhceeeccC---CH
Confidence            99999999999999998 9999999999999952       2223333566899999999999999999999654   88


Q ss_pred             hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                      ++++.+.+..    . .| +.+.+++.++...|.+.+       ++++.++++.+.++++.+.|+ .+|+   ..+.+++
T Consensus       229 ~~i~~l~~vr----~-p~-~v~~~a~~aa~aal~~~~-------~~~~~~~~~~~~r~rl~~~l~-~~~~---~~v~pS~  291 (356)
T COG0079         229 ELIAALNKVR----P-PF-NVSSPALAAAIAALRDAD-------YLEESVERIREERERLYAALK-ALGL---FGVFPSQ  291 (356)
T ss_pred             HHHHHHHHhc----C-CC-CCCHHHHHHHHHHcccHH-------HHHHHHHHHHHHHHHHHHHHH-hCCC---CeecCCC
Confidence            8666655532    2 23 567777888888888763       357888999999999999999 8872   1244444


Q ss_pred             cceeeecCCC---H-HHHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          355 IGMFSFTGLN---K-AQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       355 ~~~~~~~~~~---~-~~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                       +.|+++...   . .+.+.|++ +||.++..+         ||+++  ++++.++++++|++++..
T Consensus       292 -aNFvlv~~~~~~~~~l~~~L~~-~giivR~~~~~~~~~~~lRitvg--t~een~~ll~AL~~~~~~  354 (356)
T COG0079         292 -ANFVLVRVPDAEAAALAEALLK-KGILVRDCSSVGLLPGYLRITVG--TPEENDRLLAALREVLKG  354 (356)
T ss_pred             -CcEEEEECCCccHHHHHHHHHH-CCEEEEeCCCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence             788888763   2 34566665 599997751         99996  467779999999998765

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.4e-38  Score=300.90  Aligned_cols=333  Identities=17%  Similarity=0.199  Sum_probs=250.1

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +.+.|+|+.|.+    ..+ .++.+.+++.+.+.......|.+..|.+++|+++++++.      +++++|++  ++|++
T Consensus        27 ~~~~i~l~~~~~----~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~------~~~~~v~~--~~g~t   93 (380)
T PRK06225         27 DKEMIWMGQNTN----HLG-PHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDDEALI--TAGAT   93 (380)
T ss_pred             cCCeEEccCCCC----CCC-CCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcC------CCCCcEEE--eCCHH
Confidence            357899998876    332 368899998888765444678888899999999999963      23678999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      +++..++.  ..+.+||+|++++|+|..+...++..|++++.+++.+ ++++.+|++.+++.+.+   +++++++++|+|
T Consensus        94 ~al~~~~~--~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~N  168 (380)
T PRK06225         94 ESLYLVMR--AFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE---NTRLIYLIDPLN  168 (380)
T ss_pred             HHHHHHHH--HhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC---CceEEEEeCCCC
Confidence            99999843  3366999999999999999888899999999998743 33578999999988865   566777789999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.++|.+++++|+++|+++|+++|+||+|.+|..+.   .  .....  ..++++++.||||.+|++|+|+||+++  
T Consensus       169 ptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~--~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~--  239 (380)
T PRK06225        169 PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH---T--LAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVA--  239 (380)
T ss_pred             CCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC---C--chhhc--CCCCEEEEeechhhcCCccceeEEEec--
Confidence            99999999999999999999999999999998776431   1  11111  235789999999999999999999854  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++++....    .. ..+.+.+++.++...|...      .++.++.++.++++++.+.+.|+ ++.. ..+. .
T Consensus       240 -~~~l~~~~~~~~----~~-~~~~~~~~~~~a~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~-~~~~-~  304 (380)
T PRK06225        240 -TPDLIEVVKSIV----IN-DLGTNVIAQEAAIAGLKVK------DEWIDRIRRTTFKNQKLIKEAVD-EIEG-VFLP-V  304 (380)
T ss_pred             -CHHHHHHHHHHH----hc-ccCCCHHHHHHHHHHHhcc------hHHHHHHHHHHHHHHHHHHHHHH-hCcC-Cccc-c
Confidence             777666654432    11 2345667777776666532      12235666777778888888887 6421 0112 2


Q ss_pred             cCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC-------C----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          352 LRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       352 ~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~-------g----Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+..+.|.|+.+     +. ++..++. ++||.+.||       +    |++++. +++++++++++|+++++++
T Consensus       305 ~~~~g~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~  377 (380)
T PRK06225        305 YPSHGNMMVIDISEAGIDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETL  377 (380)
T ss_pred             CCCCCeEEEEEcccccCCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence            345566777643     33 3455565 579999885       2    999986 8899999999999998764

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-38  Score=301.69  Aligned_cols=325  Identities=17%  Similarity=0.206  Sum_probs=245.4

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      .+.+|+|+.|.+    ... .++.+.+++.+....  ...|++..| .++|+++++++.      +++++|++  |+|++
T Consensus        35 ~~~~i~l~~~~~----~~~-~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~~------~~~~~i~~--t~G~~   98 (371)
T PRK05166         35 VPRIAKLGSNEN----PLG-PSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAARTG------VPADRIIL--GNGSE   98 (371)
T ss_pred             CcceEEcCCCCC----CCC-CCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHH
Confidence            347899999987    222 257888887765432  367987778 499999999962      23789999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++..+..  ..+.+||.|+++.|+|+.+...++..|.+++.+++.  .++++|++++++.+++   +++++++++||||
T Consensus        99 ~~l~~~~~--~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP  171 (371)
T PRK05166         99 DLIAVICR--AVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVT--PDLGFDLDALCAAVAR---APRMLMFSNPSNP  171 (371)
T ss_pred             HHHHHHHH--HhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHhhhc---CCCEEEEeCCCCC
Confidence            99988743  336799999999999999999999999999999883  4578899999998875   4566777999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|++ +++||+||+|.+|.+++.  ....+..+....+++++++||||.||++|+|+||+  +++
T Consensus       172 tG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~--i~~  246 (371)
T PRK05166        172 VGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD--YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYG--LVS  246 (371)
T ss_pred             CCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC--cccHHHHHhhcCCCEEEEeechHhhhcchhheeee--ecC
Confidence            9999999999999999874 889999999999885421  11112122223458999999999999999999997  445


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++.+.+..    ..  ...+++.++|.++...+.+.+       ++++.++.++++++++.+.|+ +.|    +.+ .
T Consensus       247 ~~~l~~~~~~----~~--~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g----~~~-~  307 (371)
T PRK05166        247 DPELVGLLDR----VR--TPFNVNGAAQAAALAALDDEE-------HLAKGVALALAERERLKKELA-EMG----YRI-A  307 (371)
T ss_pred             CHHHHHHHHH----hc--cCCCCCHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHH-HCc----Cee-C
Confidence            6775555433    22  123467778877777776543       245667888889999999998 776    343 3


Q ss_pred             CCcceeeecCC--C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          353 RQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       353 ~~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      +.+|+|+|+.+  + .++.+.+++ +||.+.|+.        ||+++.  .++.+++.+.|+.++.
T Consensus       308 p~~g~fl~~~~~~~~~~l~~~l~~-~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i~~  370 (371)
T PRK05166        308 PSRANFLFFDARRPASAVAEALLR-QGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKVLE  370 (371)
T ss_pred             CCcCCEEEEeCCCCHHHHHHHHHH-CCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHhh
Confidence            55688999865  2 345666665 599999862        999974  6678888888877653

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-38  Score=300.31  Aligned_cols=320  Identities=18%  Similarity=0.163  Sum_probs=243.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +++++|+.|++    ..+ +++.+++++.+.+.......|++ .|.+++|+++++++...     ..++|++  ++|+++
T Consensus        26 ~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~-----~~~~I~~--t~G~~~   92 (356)
T PRK04870         26 TGMVKLDAMEN----PYR-LPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGVP-----AGADVLL--GNGSDE   92 (356)
T ss_pred             CCceeCcCCCC----CCC-CCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCcC-----CCCcEEE--cCCHHH
Confidence            57899999987    333 37899999988775433367865 68899999999997422     1257888  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++..+..  ..+.+||+|++++|+|..|...++..|++++.+++.  +++.+|++.+++.+..  .+++++++++|||||
T Consensus        93 ~i~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~p~NPt  166 (356)
T PRK04870         93 LIQLLAL--ACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAE--HRPALVFLAYPNNPT  166 (356)
T ss_pred             HHHHHHH--HhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc--CCCCEEEEcCCCCCC
Confidence            9988743  336799999999999999999999999999999983  4578999999998864  256677778999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++|+++|   +.++|+||+|.+|....    .  . ......+++++++|||| ++++|+|+||+++   +
T Consensus       167 G~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~----~--~-~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~---~  232 (356)
T PRK04870        167 GNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS----W--L-PRLARFPNLLVMRTVSK-LGLAGLRLGYLAG---H  232 (356)
T ss_pred             CCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc----h--H-HHHhhCCCEEEEecchh-hhhHHHhhhhhhC---C
Confidence            9999999999999998   67899999999876421    1  1 12234468999999999 8999999999854   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++++..    .. ..+ +.+.++|.++..++++.+       .+++.+++++++++.+.+.|+ +++  + +.+. +
T Consensus       233 ~~~i~~~~~----~~-~~~-~~~~~~q~~a~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~--~-~~~~-~  294 (356)
T PRK04870        233 PAWIAELDK----VR-PPY-NVNVLTQATALFALEHVD-------VLDAQAAQLRAERTRLAAALA-ALP--G-VTVF-P  294 (356)
T ss_pred             HHHHHHHHH----cc-CCC-cCCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-hCC--C-cEEC-C
Confidence            775555443    22 122 466677777777776532       245777888899999999998 763  1 3443 4


Q ss_pred             CcceeeecCC-CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHh
Q 015283          354 QIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       354 ~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      .+++|+|+.+ +.+.+.+.++++||.+.++.          ||+++  +.+++++++++|++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~  356 (356)
T PRK04870        295 SAANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL  356 (356)
T ss_pred             CCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence            5677888876 34445555567899998751          99986  5788999999998764

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-38  Score=298.34  Aligned_cols=320  Identities=13%  Similarity=0.118  Sum_probs=243.7

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      ..++|+.|++    +.++ ++.+.+++.+....  ...|++. +.++||+++++++.      +++++|++  ++|++++
T Consensus        33 ~~~~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~~------~~~~~I~i--t~G~~~~   96 (369)
T PRK08153         33 FRARIGANES----GFGP-SPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHHG------VAPENIMV--GEGIDGL   96 (369)
T ss_pred             ceeEecCCCC----CCCC-CHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHhC------CCHHHEEE--cCCHHHH
Confidence            4579999987    4433 67888888776532  2568654 58899999999962      34789999  9999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                      +..+..+  .+.+||.|++++|+|+.+...++..|.+++.+|+.   +...|++.+++.+.+  .++.++++++|+||||
T Consensus        97 l~~~~~~--~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~---~~~~~~~~l~~~~~~--~~~~~i~l~~P~NPtG  169 (369)
T PRK08153         97 LGLIVRL--YVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYR---DDREDLDALLDAARR--ENAPLVYLANPDNPMG  169 (369)
T ss_pred             HHHHHHH--hcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCC---CCCCCHHHHHHHhcc--cCCcEEEEeCCCCCCC
Confidence            9987433  36799999999999999998888899999999873   224788888776653  3566777799999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .++|.+++++++++|+ ++++||+||+|.++.+++   ....   +....+++++++||||.||++|+|+||+++   ++
T Consensus       170 ~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~---~~~~---~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~---~~  239 (369)
T PRK08153        170 SWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG---AAPP---IDTDDPNVIRMRTFSKAYGLAGARVGYAIG---AP  239 (369)
T ss_pred             CCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc---cchh---hhhcCCCEEEEecchHhccCcchheeeeec---CH
Confidence            9999999999999987 499999999999988542   1122   222346899999999999999999999854   77


Q ss_pred             hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                      ++++.+...    .. . .+.+..+|.++..+|+++++       +++.++.++++++.+.+.|+ +.|    +... +.
T Consensus       240 ~~~~~l~~~----~~-~-~~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~~~~~L~-~~g----~~~~-p~  300 (369)
T PRK08153        240 GTIKAFDKV----RN-H-FGMNRIAQAAALAALKDQAY-------LAEVVGKIAAARDRIAAIAR-ANG----LTPL-PS  300 (369)
T ss_pred             HHHHHHHHh----hc-C-CCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CccC-CC
Confidence            766555432    22 2 34677888888888876533       35678888889999999998 776    3433 56


Q ss_pred             cceeeecCCC------HHHHHHhhhcCcEEEc-CC-----C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          355 IGMFSFTGLN------KAQSDNMTNKWHVYMT-KD-----G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       355 ~~~~~~~~~~------~~~~~~ll~~~gi~v~-~~-----g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++|+|+.+.      ..+.+++++ +||.+. |+     +  ||+++  ++++++.+++.|++++..+
T Consensus       301 ~~~f~~~~~~~~~~~a~~l~~~l~~-~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~~~~  366 (369)
T PRK08153        301 ATNFVAIDCGRDGAFARAVLDGLIA-RDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEALEAA  366 (369)
T ss_pred             cCcEEEEECCCCcccHHHHHHHHHH-CCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence            7888887552      233455554 699995 43     2  99986  6899999999999988653

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=3e-38  Score=299.06  Aligned_cols=317  Identities=18%  Similarity=0.166  Sum_probs=241.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ++.++|+.|++    +.+ +++.+.+++.+....  ...|++. +.+++|+++++++.      +++++|++  |+|+++
T Consensus        43 ~~~i~l~~~~~----~~~-~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~~------v~~e~I~i--t~Gs~~  106 (370)
T PRK09105         43 EGAVFLNANEC----PLG-PSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQEG------LPADHVMA--YAGSSE  106 (370)
T ss_pred             CCcEEecCCCC----CCC-CCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHhC------cChhhEEE--cCChHH
Confidence            46799999986    333 368888888776543  2458544 48999999999852      34889999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++..+.  ...+.+||+|++++|+|+.|...++..|.+++.+++.  .++.+|++.+++. .   +++.+++++||||||
T Consensus       107 ai~~~~--~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~-~---~~~~~v~l~nP~NPT  178 (370)
T PRK09105        107 PLNYAV--LAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLR--ADGAHDVKAMLAA-D---PNAGLIYICNPNNPT  178 (370)
T ss_pred             HHHHHH--HHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHhc-C---CCCCEEEEeCCCCCC
Confidence            999984  3336799999999999999999999999999999883  3577899988765 2   246677779999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.++++++++.|+ +++++|+||+|.+|...   .   +...+.+..+++++++||||.||++|+|+||+++   +
T Consensus       179 G~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~---~---s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~---~  248 (370)
T PRK09105        179 GTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA---P---SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAA---R  248 (370)
T ss_pred             CcCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC---c---chHHHHhhCCCEEEEecccHhhcCCccceeeeec---C
Confidence            99999999999998764 58999999999877532   1   2223334567899999999999999999999854   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++++...       .+..++..++.++...|.+.+       ++++.++.++++++.+.+.|+ +.+    +.+.++
T Consensus       249 ~~~i~~l~~~-------~~~~~~~~~~~aa~~~L~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~  309 (370)
T PRK09105        249 PDLLAKLARF-------GHNPLPVPAAAAGLASLRDPK-------LVPQRRAENAAVREDTIAWLK-KKG----YKCTPS  309 (370)
T ss_pred             HHHHHHHHhc-------CCCCcCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CCcCCC
Confidence            7766655432       123466777777777777543       346777888999999999998 776    456667


Q ss_pred             CcceeeecCC--C-HHHHHHhhhcCcEEEcC---C--C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          354 QIGMFSFTGL--N-KAQSDNMTNKWHVYMTK---D--G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       354 ~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~---~--g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      .+++|. +.+  + .++.+++++ .||.+..   +  +  ||+++  ++++++++++.|+++++
T Consensus       310 ~~~f~~-~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~~~  369 (370)
T PRK09105        310 QANCFM-VDVKRPAKAVADAMAK-QGVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKVMR  369 (370)
T ss_pred             CCcEEE-EeCCCCHHHHHHHHHH-CCcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence            777664 543  3 345667766 5998831   1  2  99986  47889999999988753

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.3e-38  Score=300.03  Aligned_cols=315  Identities=17%  Similarity=0.176  Sum_probs=239.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|+|+.|++    ..+ +++.+++++.+..   ....| |..+.+++|+++++++.      +++++|++  |+|+++
T Consensus        52 ~~~i~l~~n~~----p~~-~~~~v~~a~~~~~---~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~~--t~Ga~~  114 (380)
T PLN03026         52 EDIVKLDANEN----PYG-PPPEVLEALGNMK---FPYVY-PDPESRRLRAALAEDSG------LESENILV--GCGADE  114 (380)
T ss_pred             cceEEccCCCC----CCC-CCHHHHHHHHhhH---hhccC-CCCCHHHHHHHHHHHhC------cChhhEEE--cCCHHH
Confidence            57899999986    222 2577888776521   12457 44578999999999964      34789999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++..+.  ...+.+||+|++++|+|+.|...++..|++++.++.  .+++.+|++.+++.+..  +++.++++++|||||
T Consensus       115 ~i~~~~--~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~--~~~~~v~l~~P~NPT  188 (380)
T PLN03026        115 LIDLLM--RCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPR--TPDFSLDVPRIVEAVET--HKPKLLFLTSPNNPD  188 (380)
T ss_pred             HHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHHhc--cCCcEEEEeCCCCCC
Confidence            999874  333679999999999999999999999999999987  34578999999998843  256777779999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++|++.+    ++||+||+|.+|.+.+   ..   .......+++++++||||.||++|+|+||++.   +
T Consensus       189 G~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~---~  255 (380)
T PLN03026        189 GSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---SR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAF---P  255 (380)
T ss_pred             CCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---ch---HHHHHhCCCEEEEecchHhhcCccccceeeec---C
Confidence            9999999999997653    8999999999987531   11   12234557899999999999999999999754   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++.+..    ... . .+.+..+|.++..+|.+.++       +++.++.++++++++.+.|+ +++.   +. ..+
T Consensus       256 ~~~i~~l~~----~~~-~-~~~~~~~q~aa~~aL~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~~---~~-~~p  317 (380)
T PLN03026        256 LSIIEYLWR----AKQ-P-YNVSVAAEVAACAALSNPKY-------LEDVKNALVEERERLFGLLK-EVPF---LE-PYP  317 (380)
T ss_pred             HHHHHHHHH----hcC-C-CCCCHHHHHHHHHHhhCHHH-------HHHHHHHHHHHHHHHHHHHH-HCCC---Ce-ECC
Confidence            776655543    222 2 24667788888888876432       46778889999999999998 7752   23 346


Q ss_pred             CcceeeecCC----CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHH
Q 015283          354 QIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       354 ~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      .+++|+|+.+    +. ++...++ ++||.+.++      +  |||++  +.++++++++.|+++
T Consensus       318 ~~~~f~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~  379 (380)
T PLN03026        318 SDANFILCRVTSGRDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL  379 (380)
T ss_pred             CCCeEEEEECCCCCCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence            6788888754    23 4455666 579999875      1  99996  467888888888764

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=5.7e-38  Score=297.09  Aligned_cols=321  Identities=14%  Similarity=0.107  Sum_probs=234.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|+|+.|++    ..+ +++.+.+++.+.+..  ...|++. +..+||+++++++      .+++++|++  |+|+++
T Consensus        22 ~~~i~l~~~~n----~~~-~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~i--t~G~~~   85 (360)
T PRK07392         22 DAILDFSASIN----PLG-PPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILP--GNGAAE   85 (360)
T ss_pred             ccEEEeCCcCC----CCC-CCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEE--CCCHHH
Confidence            46899999876    333 268888888776643  3678654 5689999999997      245889999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc---ccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV---GLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      ++.++.   ..+.+||.|++++|+|..|...++..|++++.+++.++.++   ..+++.+++..    .++++++++|||
T Consensus        86 ~i~~~~---~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~nP~  158 (360)
T PRK07392         86 LLTWAG---RELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLNNPH  158 (360)
T ss_pred             HHHHHH---HHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc----cCCCEEEEeCCC
Confidence            999873   33557899999999999999999999999999998544333   23455554432    256677779999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||||.+++.+++.++   ++++++ +|+||+|.+|.+.+   ...+........+++++++||||.||++|+|+||++. 
T Consensus       159 NPTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~---~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~-  230 (360)
T PRK07392        159 NPTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPPD---AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA-  230 (360)
T ss_pred             CCCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccCc---cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC-
Confidence            999999998776665   667775 66699999998642   1112223334556899999999999999999999844 


Q ss_pred             eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                        ++++++++..    ..  ...+++.++|.++..+|++.++    .   +..++.++++++++.+.|+ +++.   +..
T Consensus       231 --~~~~~~~~~~----~~--~~~~~s~~~q~~~~~~l~~~~~----~---~~~~~~~~~~r~~l~~~L~-~~~~---~~~  291 (360)
T PRK07392        231 --HPDRLQRWQQ----WR--DPWPVNGLAAAAAIAALADRDF----Q---QQTWAWLPPAREALFQGLA-SLPG---LTP  291 (360)
T ss_pred             --CHHHHHHHHh----hC--CCCCCCHHHHHHHHHHhccHHH----H---HHHHHHHHHHHHHHHHHHH-hCCC---cEE
Confidence              6675555432    22  1235778888888888887543    2   3455678888999999998 7631   344


Q ss_pred             ccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          351 ILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       351 ~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      . +.+++|+|+.+.   .++..++++++||.+.||.          ||+++.  .++.+++.+.|++++.
T Consensus       292 ~-~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~~  358 (360)
T PRK07392        292 L-PSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAILA  358 (360)
T ss_pred             C-CCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhh
Confidence            3 467889998652   3456677777899998871          999975  4555777777776654

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3e-37  Score=291.01  Aligned_cols=319  Identities=16%  Similarity=0.125  Sum_probs=236.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +..++|+.|++    ..+ +|+.+.+++.+.+.......|++ .+.+++|+++++++.      +++++|++  |+|+++
T Consensus        22 ~~~~~l~~~~~----~~~-~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~------~~~~~i~i--t~G~~~   87 (351)
T PRK14807         22 PYKYKMDANET----PFE-LPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYCS------VVPTNIFV--GNGSDE   87 (351)
T ss_pred             CceeEccCCCC----CCC-CCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHhC------CCcccEEE--ecCHHH
Confidence            34688998887    333 36888998888765433367854 457899999999963      23789999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++..++..  .+.+||+|++++|+|..+...++..|++++.+++  ++++.+|++.+++.+++  .+++++++++|+|||
T Consensus        88 ~l~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~--~~~k~v~l~~p~NPt  161 (351)
T PRK14807         88 IIHLIMLA--FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKL--KEDYTYDVGSFIKVIEK--YQPKLVFLCNPNNPT  161 (351)
T ss_pred             HHHHHHHH--hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeec--CCCCCCCHHHHHHHhhc--cCCCEEEEeCCCCCC
Confidence            99987433  3779999999999999999988999999999987  34578999999998864  256667778999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++++   ++++.++|+||+|.++. + .  ...   ......+++++++||||.+|+||+|+||++.   +
T Consensus       162 G~~~~~~~l~~l~---~~~~~~~ivDe~y~~~~-~-~--~~~---~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~---~  228 (351)
T PRK14807        162 GSVIEREDIIKII---EKSRGIVVVDEAYFEFY-G-N--TIV---DVINEFENLIVLRTLSKAFGLAGLRVGYAVA---N  228 (351)
T ss_pred             CCCCCHHHHHHHH---HhCCCEEEEeCcchhhc-c-c--chH---HHhhhCCCEEEEecchHhcccchhceeeeec---C
Confidence            9999998888875   45567899999998774 2 1  111   2233456899999999999999999999854   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++.+..    ...  ..+.+.++|.++..+|++..        +++..+.++++++.+.+.|+ +..  + +.+. +
T Consensus       229 ~~~~~~~~~----~~~--~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~~~~r~~l~~~l~-~~~--g-~~~~-~  289 (351)
T PRK14807        229 ENILKYLNL----VKS--PYNINSLSQVIALKVLRTGV--------LKERVNYILNERERLIKELS-KIP--G-IKVY-P  289 (351)
T ss_pred             HHHHHHHHH----ccC--CCCcCHHHHHHHHHHHhHHH--------HHHHHHHHHHHHHHHHHHHH-hCC--C-cEEC-c
Confidence            786665543    222  23456778888888877532        23455567788888888887 652  1 4544 4


Q ss_pred             CcceeeecCC-CHHHHHHhhhcCcEEEcCC-------C--eEEecCCCcccHHHHHHHHHHHh
Q 015283          354 QIGMFSFTGL-NKAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       354 ~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      .+++|+|+.+ +.+.+.+.+.++||.+.+.       +  ||+++.  .++.+++++.|++++
T Consensus       290 ~~~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~~  350 (351)
T PRK14807        290 SKTNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVSS--CEANDYLINGLKELL  350 (351)
T ss_pred             CCccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHhh
Confidence            5577888876 3444444444579998663       1  999964  677889999998764

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=7.3e-37  Score=288.41  Aligned_cols=317  Identities=15%  Similarity=0.135  Sum_probs=237.7

Q ss_pred             CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           32 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        32 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ..++.+||+.|++    ..+ +++.+++++.+.+..  ...|++..|.+++|+++++++.      +++++|++  |+|+
T Consensus        20 ~~~~~~~l~~~~~----~~~-~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~------~~~~~I~i--t~Ga   84 (349)
T PRK07908         20 AGPGLLDFAVNVR----HDT-PPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARHG------RTPDEVLL--LAGA   84 (349)
T ss_pred             CCCCeEEecCCCC----CCC-CCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHhC------cChhhEEE--CCCH
Confidence            3468999999986    222 368889988877643  3679888899999999999963      34789999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++.+++.    +.+ +.++++.|+|..+...++..|.+++.+++.  .++.+|++.+    .+   ++++++++||||
T Consensus        85 ~~al~~~~~----l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~--~~~~~d~~~l----~~---~~~~i~l~np~N  150 (349)
T PRK07908         85 AEGFALLAR----LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLD--PPFRLDPAAV----PD---DADLVVIGNPTN  150 (349)
T ss_pred             HHHHHHHHh----cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccC--cccCcChhHh----cc---CCCEEEEcCCCC
Confidence            999998733    556 567788999999999999999999999883  2377887744    22   456777799999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.++|.+++.++   |+ ++.++|+||+|.++..+.    ..++..  ...+++++++||||.|+++|+|+||+++  
T Consensus       151 PTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~~~----~~~l~~--~~~~~~i~i~S~SK~~~l~GlRiG~~~~--  218 (349)
T PRK07908        151 PTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVPGE----PESLAG--DDLPGVLVLRSLTKTWSLAGLRVGYALG--  218 (349)
T ss_pred             CCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhccCC----cccccc--ccCCCEEEEeecccccCCccceeeeeec--
Confidence            99999998876655   55 578899999999875431    112211  1335799999999999999999999854  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++++...    ... + +.+...+.++..++.+..     .+++++.++.++++++++.+.|+ +.+    +.+.
T Consensus       219 -~~~~~~~~~~~----~~~-~-~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~~r~~l~~~L~-~~~----~~~~  281 (349)
T PRK07908        219 -APDVLARLTRG----RAH-W-PVGTLQLEAIAACCAPRA-----VAEAAADAARLAADRAEMVAGLR-AVG----ARVV  281 (349)
T ss_pred             -CHHHHHHHHhc----CCC-C-CccHHHHHHHHHHhcccc-----hHHHHHHHHHHHHHHHHHHHHHH-hCC----cEec
Confidence             77766655432    221 2 233445555566666432     23456788999999999999998 775    4667


Q ss_pred             cCCcceeeecCCC-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          352 LRQIGMFSFTGLN-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       352 ~~~~~~~~~~~~~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+.+++|+|+.+. .+.+.+.++++||.+.||.          |||++  ++++++++++.|++++..
T Consensus       282 ~p~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~~  347 (349)
T PRK07908        282 DPAAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILKA  347 (349)
T ss_pred             cCCCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHhc
Confidence            7788999999774 4556666677899998751          99994  688999999999998753

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6e-37  Score=286.44  Aligned_cols=310  Identities=15%  Similarity=0.137  Sum_probs=227.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|+|+.|++    ..++ ++.+.+++.+.+.......|++ .|.++||+++++++...+   +++++|++  |+|+++
T Consensus        19 ~~~i~l~~~~~----~~~~-p~~~~~~~~~~~~~~~~~~Y~~-~~~~~Lr~aia~~~~~~~---~~~~~i~i--t~Ga~~   87 (335)
T PRK14808         19 RDRTYLALNEN----PFPF-PEDLVDEVFRRLNSDTLRIYYD-SPDEELIEKILSYLDTDF---LSKNNVSV--GNGADE   87 (335)
T ss_pred             CceeEecCCCC----CCCC-CHHHHHHHHHHhhhhhhhcCCC-CChHHHHHHHHHHhCCCC---CCcceEEE--cCCHHH
Confidence            47899999987    4433 6888888877664433244744 589999999999986542   56899999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.++...   +   |.|++++|+|+.|...++..|++++.+++.  +++.++...    +.    .+++++++||||||
T Consensus        88 ~i~~~~~~---~---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~----~~----~~~~i~i~nP~NPT  151 (335)
T PRK14808         88 IIYVMMLM---F---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVN----VG----EGDVVFIPNPNNPT  151 (335)
T ss_pred             HHHHHHHH---h---CcEEECCCCHHHHHHHHHHcCCeEEEecCC--CcCCCChhH----cc----CCCEEEEeCCCCCC
Confidence            99987432   3   789999999999999999999999999983  234333221    22    34677789999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.++|.+++++|+    +++++||+||+|.+|...    ...   ......+++++++||||.++++|+|+||+++   +
T Consensus       152 G~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~~~---~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~---~  217 (335)
T PRK14808        152 GHVFEREEIERIL----KTGAFVALDEAYYEFHGE----SYV---DLLKKYENLAVIRTFSKAFSLAAQRIGYVVS---S  217 (335)
T ss_pred             CCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----chH---HHHHhCCCEEEEEechhhccCcccceEEEEe---C
Confidence            9999999999885    479999999999998521    111   2233456899999999999999999999855   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++++..    ...  ..+.+.++|.++..++++.+       ..++.++.++++++++.+.|+ +.|    +.+.++
T Consensus       218 ~~~~~~l~~----~~~--~~~~~~~~q~a~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~  279 (335)
T PRK14808        218 EKFIDAYNR----VRL--PFNVSYVSQMFAKVALDHRE-------IFEERTKFIVEERERMKSALR-EMG----YRITDS  279 (335)
T ss_pred             HHHHHHHHH----hcC--CCCCCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CEECCC
Confidence            776666543    221  23456677777777776432       234556677777888999998 776    455666


Q ss_pred             CcceeeecCC---CHHHHHHhhhcCcEEEcCC--C-eEEecCCCcccHHHHHHHHHHH
Q 015283          354 QIGMFSFTGL---NKAQSDNMTNKWHVYMTKD--G-RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       354 ~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~--g-Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      + |.|+|+.+   +...+.+.+.++||.+..-  + ||+++.  .++.+++++.|++.
T Consensus       280 ~-g~f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi~~--~~~~~~~~~~l~~~  334 (335)
T PRK14808        280 R-GNFVFIFMEKEEKERLLEHLRAKNIAVRSFREGVRITIGK--REENDMILKELEVF  334 (335)
T ss_pred             C-CeEEEEeCCCccHHHHHHHHHHCCeEEEECCCCeEEecCC--HHHHHHHHHHHHhh
Confidence            5 56777654   3334444455579999864  2 999864  68889999988753

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.9e-37  Score=287.09  Aligned_cols=310  Identities=16%  Similarity=0.167  Sum_probs=230.9

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      ..|+|+.|.+    ..+ .++.+.+++.+.+.......|+ ..|.+++|+++++++.      +++++|++  |+|++++
T Consensus        19 ~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~   84 (337)
T PRK03967         19 YRIWLDKNEN----PFD-LPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFYG------LDAENIAV--GNGSDEL   84 (337)
T ss_pred             ceEEecCCCC----CCC-CCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHhC------cCcceEEE--cCCHHHH
Confidence            5799999986    322 3678888887776432236784 5799999999999974      35789999  9999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                      +..+.   ..+ +||+|+++.|+|+.|...++..|.+++.+++.  +++.+|++.+++.+.    +++++++++||||||
T Consensus        85 l~~~~---~~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~----~~~~v~~~~P~NPtG  154 (337)
T PRK03967         85 ISYLV---KLF-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKAK----NASAVFICSPNNPTG  154 (337)
T ss_pred             HHHHH---HHh-CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhcc----CCCEEEEeCCCCCCC
Confidence            98763   333 79999999999999998889999999999883  457899999887653    345666799999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .+++.+++.+++    ++++++|+||+|.+|...    ..   .......+++++++||||.||+||+|+||+++   ++
T Consensus       155 ~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~----~~---~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~---~~  220 (337)
T PRK03967        155 NLQPEEEILKVL----ETGKPVVLDEAYAEFSGK----SL---IGLIDEYPNLILLRTFSKAFGLAGIRAGYAIA---NE  220 (337)
T ss_pred             CCCCHHHHHHHH----hcCCEEEEECchhhhccc----ch---HHHHhhCCCEEEEecchHhhcchhhhheeeec---CH
Confidence            999998877764    479999999999987631    11   12233456899999999999999999999854   77


Q ss_pred             hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                      ++++++...    .. .+ +.+.++|.++..+|++.++       ..+.++.+.++++.+.+.|. +.        ..+.
T Consensus       221 ~~i~~~~~~----~~-~~-~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~--------~~~~  278 (337)
T PRK03967        221 EIIDALYRI----KP-PF-SLNILTMKIVRLALDHYDL-------IEERIDYIIKERERVRRELG-EY--------AYPS  278 (337)
T ss_pred             HHHHHHHhh----cC-CC-CCCHHHHHHHHHHHhCHHH-------HHHHHHHHHHHHHHHHHHhc-cC--------cCCC
Confidence            766555432    22 23 4678888888888876432       23444555667777787777 43        2356


Q ss_pred             cceeeecCCCHHHHHHhhhcCcEEEcCCC-------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          355 IGMFSFTGLNKAQSDNMTNKWHVYMTKDG-------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       355 ~~~~~~~~~~~~~~~~ll~~~gi~v~~~g-------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++|+|+.+  .+.+.+++ +||.+.+++       ||+++.  .++.+++++.|+++.+.+
T Consensus       279 ~~~~~~~~~--~~~~~l~~-~gi~v~~~~~~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~~  335 (337)
T PRK03967        279 DANFLLLKL--DAYDYLLE-NGIVVRKLSGRLEGHIRVTVGK--REENDEFIKALKEIKEGY  335 (337)
T ss_pred             CCcEEEEhH--HHHHHHHH-CCEEEEeCCCCCCCeEEEecCC--HHHHHHHHHHHHHHHHhc
Confidence            788999865  35666665 599997542       999864  677888998888876543

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=8.2e-37  Score=290.37  Aligned_cols=323  Identities=15%  Similarity=0.148  Sum_probs=244.9

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ..++++|+.|.+  ..+.   ++.+++++.+....  ...|++. +..++|+++++++.      +++++|++  |+|++
T Consensus        31 ~~~~i~l~~~~~--~~~~---~~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~~------~~~~~i~~--t~G~~   94 (367)
T PRK02731         31 IADIIKLASNEN--PLGP---SPKAIEAIRAAADE--LHRYPDG-SGFELKAALAEKFG------VDPERIIL--GNGSD   94 (367)
T ss_pred             CCceEEecCCCC--CCCC---CHHHHHHHHHHHHh--hcCCCCC-cHHHHHHHHHHHhC------cCHHHEEE--cCCHH
Confidence            357899999976  2232   57788888776643  3678654 45799999999973      23688999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++..++.  ..+.+||.|++++|+|..|...++..|.+++.+++   +++.+|++.+++.+++   +++++++++|+||
T Consensus        95 ~~l~~~~~--~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~---~~~~v~l~~p~np  166 (367)
T PRK02731         95 EILELLAR--AYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTP---RTRLVFIANPNNP  166 (367)
T ss_pred             HHHHHHHH--HhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCC---CCcEEEEeCCCCC
Confidence            99888733  33679999999999999998888889999998886   4577899999998864   5667777999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.++++++++.|+ +|+++|+||+|.++.+.+.  ...++ ...+..+++++++||||.||++|+|+||+++   
T Consensus       167 tG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~---  239 (367)
T PRK02731        167 TGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA---  239 (367)
T ss_pred             CCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHH-HHHhhcCCEEEEeeehHhhcCcccceeeeeC---
Confidence            999999999999998875 6999999999998876421  11222 2234456899999999999999999999854   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++++..    ... .+ +.+.++|.++..+|++..       ++++.++.++++++.+.+.|+ +.|    +.+. 
T Consensus       240 ~~~~~~~l~~----~~~-~~-~~~~~~~~~a~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~-  300 (367)
T PRK02731        240 PPEIIDALNR----VRQ-PF-NVNSLALAAAVAALDDDA-------FVEKSRALNAEGMAWLTEFLA-ELG----LEYI-  300 (367)
T ss_pred             CHHHHHHHHH----ccC-CC-CCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CccC-
Confidence            7775555443    222 22 356678888888887643       245777888889999999998 776    3444 


Q ss_pred             CCcceeeecCC----CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          353 RQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       353 ~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +..++|+|+.+    +. ++.+.+. ++||.+.++      +  |++++  +.++++++++.|+++++.
T Consensus       301 ~~~g~~~~i~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~~  366 (367)
T PRK02731        301 PSVGNFILVDFDDGKDAAEAYQALL-KRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLAA  366 (367)
T ss_pred             CCCceEEEEECCCCCCHHHHHHHHH-HCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHhc
Confidence            44578888765    33 3455555 579999885      2  99985  578999999999998754

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.4e-37  Score=289.29  Aligned_cols=297  Identities=19%  Similarity=0.238  Sum_probs=225.1

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCC
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDAR  149 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g  149 (410)
                      ..|+. .+..++|+++++++.      +++++|++  ++|+++++.+++.  ..+.+| |.|++++|+|..|...++..|
T Consensus        54 ~~Y~~-~~~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~l~~~~~--~~~~~g~~~vlv~~p~y~~~~~~~~~~g  122 (364)
T PRK04781         54 RRYPD-PQPPGLRSALAALYG------CAPEQLLI--GRGSDEAIDLLVR--ALCVPGRDAVLVTPPVFGMYAVCARLQN  122 (364)
T ss_pred             ccCCC-CCHHHHHHHHHHHhC------cChHHEEE--eCCHHHHHHHHHH--HhcCCCCCeEEEcCCChHHHHHHHHHcC
Confidence            56754 457899999999963      34789999  9999999999843  335688 799999999999998888999


Q ss_pred             CCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283          150 VPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG  228 (410)
Q Consensus       150 ~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~  228 (410)
                      .+++.+++.+ .+++.+|++.+++.+..  +++.++++++||||||.+++.+++++++++|+ ++++||+||+|.+|.+.
T Consensus       123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~  199 (364)
T PRK04781        123 APLVEVPLVDGADGFHADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV  199 (364)
T ss_pred             CEEEEEecCCCccCCCcCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC
Confidence            9999999843 34567888888665533  35677777899999999999999999999986 47899999999998853


Q ss_pred             CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283          229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~  308 (410)
                         .   +...+.+..+++++++||||+||+||+|+||++.   ++++++.+..    ... .+ +.+.++|.++..+|.
T Consensus       200 ---~---~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~---~~~l~~~l~~----~~~-~~-~~~~~~~~~a~~~l~  264 (364)
T PRK04781        200 ---P---SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIA---NAELIAVLRR----CQA-PY-PVPTPCAALAEQALS  264 (364)
T ss_pred             ---c---chHHHHhhCCCEEEEecChhhcccccceeeeeeC---CHHHHHHHHh----ccC-CC-CCCHHHHHHHHHHHh
Confidence               1   1223345567899999999999999999999854   7786555443    322 22 456777788888887


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-CHHHHHHhhhcCcEEEcCCC----
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG----  383 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g----  383 (410)
                      ++.+     +...+..++++++++.+.+.|+ +++.   +....+.+|+|+|+.+ +.+.+.+.++++||.+.++.    
T Consensus       265 ~~~~-----~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~  335 (364)
T PRK04781        265 APAL-----AVTARRVAEVRAERERLHAALA-QLPG---VRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVVRDQRAAPR  335 (364)
T ss_pred             cccH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC---CCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEeeCCCCCC
Confidence            7532     1234455577889999999998 7731   3333467789999876 34444444556799998861    


Q ss_pred             -----eEEecCCCcccHHHHHHHHHHHhh
Q 015283          384 -----RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       384 -----Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                           ||+++  +.++.+++++.|+++..
T Consensus       336 ~~~~~Ris~~--~~~~~~~l~~al~~~~~  362 (364)
T PRK04781        336 LSDALRITLG--TPEQNDRVLAALQRTQA  362 (364)
T ss_pred             CCCeEEEeCC--CHHHHHHHHHHHHHHHh
Confidence                 99986  47889999999988754

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=8.1e-37  Score=288.65  Aligned_cols=323  Identities=15%  Similarity=0.142  Sum_probs=239.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ..+|+|+.|.+    ..++ ++.+.+++.+....  ...| +..|.+++|+++++++.      +++++|++  ++|+++
T Consensus        22 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~--~~G~~~   85 (352)
T PRK03321         22 PGAIKLSSNET----PFGP-LPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHLG------VPPEHVAV--GCGSVA   85 (352)
T ss_pred             ccceeccCCCC----CCCC-CHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHhC------cCHHHEEE--CCCHHH
Confidence            36899999987    3322 57888888776543  3567 56799999999999974      33789999  999998


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++..+..  ..+.+||+|+++.|+|..|...++..|.+++.+++.  .++.+|++.+++.++.   +++++++++|+|||
T Consensus        86 ~l~~~~~--~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p~NPt  158 (352)
T PRK03321         86 LCQQLVQ--ATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLT--PDHTHDLDAMAAAITD---RTRLIFVCNPNNPT  158 (352)
T ss_pred             HHHHHHH--HhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC--CCCCCCHHHHHHhhcc---CCCEEEEeCCCCCc
Confidence            8887733  336799999999999999988889999999999873  2367899999988865   55666678999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++.++++.| +++++||+||+|.++.+.+..  ..++ ......+++++++||||.||++|+|+||+++   +
T Consensus       159 G~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~--~~~~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~  231 (352)
T PRK03321        159 GTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDV--PDGL-ELVRDHPNVVVLRTFSKAYGLAGLRVGYAVG---H  231 (352)
T ss_pred             CCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCC--CcHH-HHHhhCCCEEEEecchHHhhhHHHhhhhhcC---C
Confidence            9999999999998876 479999999999998864311  1122 2233456899999999999999999999854   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++.+...    .  ...+.+.++|.++...|...+.   |    .+..+.+.++++.+.+.|+ +.+    +...+ 
T Consensus       232 ~~~~~~~~~~----~--~~~~~s~~~q~~a~~~l~~~~~---~----~~~~~~~~~~r~~~~~~L~-~~~----~~~~~-  292 (352)
T PRK03321        232 PEVIAALRKV----A--VPFSVNSLAQAAAIASLAAEDE---L----LERVDAVVAERDRVRAALR-AAG----WTVPP-  292 (352)
T ss_pred             HHHHHHHHHh----c--CCCCCCHHHHHHHHHHhcCHHH---H----HHHHHHHHHHHHHHHHHHH-HCC----CccCC-
Confidence            7766665432    1  2235677788777777764221   2    2333344455677888888 766    34333 


Q ss_pred             CcceeeecCC--CH-HHHHHhhhcCcEEEcCCC----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          354 QIGMFSFTGL--NK-AQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       354 ~~~~~~~~~~--~~-~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+|+|+|+.+  +. ++.+.+ +++||.+.+.+    ||+++  +.+++++++++|+++++-
T Consensus       293 ~~g~~i~i~l~~~~~~~~~~l-~~~gI~v~~~~~~~iRi~~~--~~~~~~~~~~al~~~~~~  351 (352)
T PRK03321        293 SQANFVWLPLGERTADFAAAA-AEAGVVVRPFAGEGVRVTIG--APEENDAFLRAARAWRAG  351 (352)
T ss_pred             CCCCEEEEeCCCCHHHHHHHH-HHCCEEEEccCCCcEEEeeC--CHHHHHHHHHHHHHHhcc
Confidence            4578899865  23 345555 55799998853    99984  689999999999998753

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.5e-36  Score=284.04  Aligned_cols=322  Identities=15%  Similarity=0.123  Sum_probs=231.1

Q ss_pred             CCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283           15 MAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD   94 (410)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~   94 (410)
                      -.++.++..++..+... ...+++|+.+++  ..+.|.  +.+..   ..     ...|+. .. .+||+++++++.-. 
T Consensus         6 ~~hg~~~~~~~~~~~~~-~~~~i~ls~Nen--p~~~~~--~~~~~---~~-----~~~Yp~-~~-~~L~~~ia~~~~~~-   69 (339)
T PRK06959          6 IAHGGNLHEAARRYGIP-YDAWLDLSTGIN--PHGYPV--PPVPA---DA-----WRRLPE-DD-DGLAACAARYYGAP-   69 (339)
T ss_pred             cCCCchHHHHHHHcCCC-hhhhceeccCCC--CCCCCC--CCCCH---HH-----HHhCCC-ch-HHHHHHHHHHhCCC-
Confidence            34455555555444322 235799999986  333321  11111   11     144753 34 89999999996432 


Q ss_pred             CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283           95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI  174 (410)
Q Consensus        95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i  174 (410)
                          ++++|++  ++|+++++.++   ...+.+|| |++++|+|+.|...++..|++++.++..+        +.+    
T Consensus        70 ----~~~~I~i--~~Gs~e~i~~l---~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----  127 (339)
T PRK06959         70 ----DAAHVLP--VAGSQAAIRAL---PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----  127 (339)
T ss_pred             ----CcccEEE--CcCHHHHHHHH---HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----
Confidence                2589999  99999999865   33456776 89999999999999999999998887621        222    


Q ss_pred             hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc
Q 015283          175 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS  254 (410)
Q Consensus       175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  254 (410)
                      .+   ...++++||||||||.+++.++++++++.|.+++.++|+||+|.+|...   .   ++..+. ..+++++++|||
T Consensus       128 ~~---~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~---s~~~~~-~~~~vi~l~SfS  197 (339)
T PRK06959        128 PA---ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA---A---SLAAHT-DRPGLVVLRSVG  197 (339)
T ss_pred             cc---cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc---c---cchhcc-CCCCEEEEecCh
Confidence            11   2345677999999999999999999999999999999999999998742   1   222222 346799999999


Q ss_pred             ccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283          255 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       255 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  334 (410)
                      |.||++|+|+||++.   ++++++++.+.    .. .+ +.+..+|.++..+|++.++       .++.++.++++++++
T Consensus       198 K~~gl~GlRiGy~v~---~~~li~~l~~~----~~-~~-~vs~~~q~a~~~~L~~~~~-------~~~~~~~~~~~r~~l  261 (339)
T PRK06959        198 KFFGLAGVRAGFVLA---APALLAALRDA----LG-AW-TVSGPARHAVRAAFADAAW-------QAAMRERLAADGARL  261 (339)
T ss_pred             hhcCCcchheEEEec---CHHHHHHHHHh----cC-CC-CCcHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHH
Confidence            999999999999854   77866665543    22 23 3567788888888887644       356788999999999


Q ss_pred             HHHhhhccCCCCCcccccCCcceeeecCC-CH-HHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhh
Q 015283          335 FDSLSAKDKSGKDWSFILRQIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       335 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      .+.|+ ++|    +...  ..++|+|+.+ +. ++...+.+ +||.+...+     ||++++ +.++++++++.|+++++
T Consensus       262 ~~~L~-~~g----~~~~--~~~~f~~~~~~~~~~l~~~l~~-~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~~~  332 (339)
T PRK06959        262 AALLR-AHG----FAVH--ATPLFSWTDDPRAAALHAALAR-RGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAECVP  332 (339)
T ss_pred             HHHHH-HCC----CCcc--CcceEEEEeCCCHHHHHHHHHh-CCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHH
Confidence            99999 876    3433  2578889876 33 44555554 699997643     999966 77899999999998876


Q ss_pred             hc
Q 015283          408 NV  409 (410)
Q Consensus       408 ~~  409 (410)
                      .+
T Consensus       333 ~~  334 (339)
T PRK06959        333 TL  334 (339)
T ss_pred             HH
Confidence            43

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5e-37  Score=289.16  Aligned_cols=311  Identities=17%  Similarity=0.199  Sum_probs=230.5

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      ..++|+.+++    ..++ ++.+        .......| |.....++++++++++.      +++++|++  ++|++++
T Consensus        29 ~~~~l~~Nen----p~~~-~~~~--------~~~~~~~Y-p~~~~~~l~~~~a~~~g------~~~~~I~~--~~Gs~e~   86 (351)
T PRK01688         29 GDVWLNANEY----PTAV-EFQL--------TQQTLNRY-PECQPKAVIENYAAYAG------VKPEQVLV--SRGADEG   86 (351)
T ss_pred             CceEecCCCC----CCCC-Chhh--------cccccccC-CCCChHHHHHHHHHHhC------CCHHHEEE--cCCHHHH
Confidence            4588988876    3222 3322        11113667 44556799999999953      24899999  9999999


Q ss_pred             HHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          115 LRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       115 ~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      +.++...  .+.+| |.|+++.|+|+.|...++..|++++.+++.  +++.+|++.+++.+.    ++.++++|||||||
T Consensus        87 i~~~~~~--~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~~~----~~~lv~l~nPnNPT  158 (351)
T PRK01688         87 IELLIRA--FCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL--DNWQLDLPAIADNLD----GVKVVYVCSPNNPT  158 (351)
T ss_pred             HHHHHHH--hcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHHhcc----CCcEEEEeCCCCCC
Confidence            9998433  36686 999999999999999999999999999883  358899999988773    56677779999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++|++.|++ +.+||+||+|.+|...   .   +...+....+++++++||||.||++|+|+||+++   +
T Consensus       159 G~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~---~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~---~  228 (351)
T PRK01688        159 GNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLA---N  228 (351)
T ss_pred             CCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC---C---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhC---C
Confidence            999999999999999986 6789999999998732   1   2223344567999999999999999999999854   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++.+.+    ... .| +.+..++.++..+|.+..     .+.+++.++.+.++++++.+.|+ +++.   +....+
T Consensus       229 ~~~i~~l~~----~~~-~~-~v~~~~~~~a~~~L~~~~-----~~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~p  293 (351)
T PRK01688        229 EEVINLLLK----VIA-PY-PLSTPVADIAAQALSPQG-----IAAMRERVAEINANRQWLIAALK-EIPC---VEQVFD  293 (351)
T ss_pred             HHHHHHHHh----ccC-CC-CCCHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHH-hCCC---CCeECC
Confidence            786665543    221 22 355666777777776532     13346677788888999999998 7742   333445


Q ss_pred             CcceeeecCCC--HHHHHHhhhcCcEEEcCC----C-----eEEecCCCcccHHHHHHHHH
Q 015283          354 QIGMFSFTGLN--KAQSDNMTNKWHVYMTKD----G-----RISLAGLSLAKCEYLADAII  403 (410)
Q Consensus       354 ~~~~~~~~~~~--~~~~~~ll~~~gi~v~~~----g-----Ris~~~~~~~~i~~~~~~l~  403 (410)
                      ..+.|+|+.+.  .++.+.|++ +||.++++    |     |||++  +.++++++++.|+
T Consensus       294 s~~nfi~~~~~~~~~l~~~L~~-~gi~vr~~~~~~~~~~~iRis~~--~~~e~~~l~~al~  351 (351)
T PRK01688        294 SETNYILARFTASSAVFKSLWD-QGIILRDQNKQPGLSNCLRITIG--TREECQRVIDALR  351 (351)
T ss_pred             CCCcEEEEEcCCHHHHHHHHHH-CCeEEEECCCcCCCCCeEEEeCC--CHHHHHHHHHhhC
Confidence            66889888763  344556665 69999754    1     99986  5789999988763

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=3.9e-36  Score=280.73  Aligned_cols=302  Identities=14%  Similarity=0.130  Sum_probs=219.9

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      ++|+|+.|++  ..+.+  ++.+.+   ...     ..|+.  +..+||+++++++.        .++|++  |+|++++
T Consensus        21 ~~i~l~~ne~--p~~~~--~~~~~~---~~~-----~~yp~--~~~~Lr~~ia~~~~--------~~~I~i--t~Gs~~a   76 (330)
T PRK05664         21 DWLDLSTGIA--PWPWP--VPAIPA---DAW-----ARLPE--TDDGLEAAARAYYG--------APQLLP--VAGSQAA   76 (330)
T ss_pred             HheeecCCcC--CCCCC--CcccCH---HHH-----HhCCC--ChHHHHHHHHHHhC--------CCCEEE--CcCHHHH
Confidence            5799999975  22222  122221   111     33643  33799999999962        368999  9999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                      +.++.    .+.+||+|++++|+|+.|...++..|++++.+++          +++++.+.    ++.++++++||||||
T Consensus        77 l~~~~----~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~----~~~~v~l~nP~NPTG  138 (330)
T PRK05664         77 IQALP----RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD----SLDVLVVVNPNNPTG  138 (330)
T ss_pred             HHHHH----HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc----CCCEEEEeCCcCCCC
Confidence            98862    2469999999999999999999999999998876          23444443    344566789999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .+++.+++++|+++|++++++||+||+|.++...   .   ++..+ ...+++++++||||.||+||+|+||++.   ++
T Consensus       139 ~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~---~---s~~~~-~~~~~vi~~~SfSK~~gl~GlRiG~~v~---~~  208 (330)
T PRK05664        139 RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ---H---SLAAC-AHRPGLIVLRSFGKFFGLAGARLGFVLA---EP  208 (330)
T ss_pred             CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc---c---ccccc-ccCCCEEEEeeccccccCCCcceEEEEe---CH
Confidence            9999999999999999999999999999876521   1   22222 2346899999999999999999999854   77


Q ss_pred             hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                      ++++.+...    .. .+ +.+..++.++..+|.+..+       .++.++.++++++++.+.|+ +.+    +.. .+.
T Consensus       209 ~l~~~~~~~----~~-~~-~~~~~~~~~~~~~L~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~----~~~-~~~  269 (330)
T PRK05664        209 ALLRALAEL----LG-PW-TVSGPTRWLAQAALADTPW-------QRRQRERLLAASQRLAALLR-RHG----LTP-AGG  269 (330)
T ss_pred             HHHHHHHHh----cC-CC-CCCHHHHHHHHHHHhChHH-------HHHHHHHHHHHHHHHHHHHH-HCC----Ccc-cCC
Confidence            766655432    22 22 3456777788888876532       35678889999999999998 776    232 122


Q ss_pred             cceeeecCC-CHHHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          355 IGMFSFTGL-NKAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       355 ~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .++|+|+.. +...+.+.+.++||.+.+-+     ||+++. +.++++++.+.|+++.++
T Consensus       270 ~~~f~~~~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~~~~  328 (330)
T PRK05664        270 CALFQWVRTEDAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWARLDQALLAYRKE  328 (330)
T ss_pred             cceEEEEecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence            337888865 34444444455799997532     999986 678899999999887665

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=4.6e-36  Score=280.64  Aligned_cols=304  Identities=13%  Similarity=0.118  Sum_probs=220.6

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .+|+|+.+++      |+.+          .  .....| |.....+||+++++++...      +++|++  |+|++++
T Consensus        17 ~~i~l~~Nen------p~~~----------~--~~~~~Y-p~~~~~~lr~~ia~~~~~~------~~~I~i--t~Gs~~~   69 (332)
T PRK06425         17 RIIDFSANIN------DFMD----------I--GDISIY-PEISYTDIEDQIKIYTQGL------KIKVLI--GPGLTHF   69 (332)
T ss_pred             CEEEeccccC------CCcC----------h--hhcccC-cCcCHHHHHHHHHHHhCCC------cceEEE--CCCHHHH
Confidence            5789998876      3310          0  112557 5556889999999996433      788999  9999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                      +.++..   .+.+| .|++++|+|+.|...++..|++++.+|+.+   +.+|.+.++    .  .+++++++++||||||
T Consensus        70 l~~~~~---~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~----~--~~~k~v~l~nP~NPTG  136 (332)
T PRK06425         70 IYRLLS---YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILN----N--YNFDLIFIVSPDNPLG  136 (332)
T ss_pred             HHHHHH---HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHh----h--cCCCEEEEeCCCCCcC
Confidence            998743   35676 577779999999999999999999999832   334544333    2  1455666689999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .++|.+++++|+++|++++++||+||+|.+|.+++   . .+...+....+++++++||||.+|+||+|+||+++   ++
T Consensus       137 ~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~---~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~---~~  209 (332)
T PRK06425        137 NLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR---A-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIAT---DD  209 (332)
T ss_pred             CccCHHHHHHHHHHHHHcCCEEEEecchhcccccc---c-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeec---CH
Confidence            99999999999999999999999999999998542   1 12223344557999999999999999999999854   77


Q ss_pred             hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                      ++++++..    ... .+. .+..++    .++....    +..++++.++.++++++++.+.|+ +.|    +....+.
T Consensus       210 ~li~~l~~----~~~-~~~-~~~~~~----~~l~~~~----~~~~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~~  270 (332)
T PRK06425        210 YNMKISRK----ITE-PWS-VCDPAI----DFIRSID----LDYVAKHSLDIMENERSYLINNLE-AMG----FRAAGDP  270 (332)
T ss_pred             HHHHHHHH----cCC-CCc-cCHHHH----HHHHHhh----hHHHHHHHHHHHHHHHHHHHHHHH-HCC----CEECCCC
Confidence            76555443    221 121 222222    2222211    133456788999999999999999 876    4554444


Q ss_pred             cceeeecCC-C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          355 IGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       355 ~~~~~~~~~-~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      .|.|+|+.+ + .++.+.+++ +||.+.|+.          ||+++  +.++.++++++|+++++
T Consensus       271 ~g~f~~~~~~~~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~  332 (332)
T PRK06425        271 SANFITFMIPDAHDFYSYLLK-NGILVRLLDDYECLGEQYIRIAIR--RRSFNIKLVNALRNFLN  332 (332)
T ss_pred             CceEEEEEcCCHHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHhC
Confidence            677888765 3 445667766 699998751          99996  47899999999998763

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=5.4e-36  Score=282.54  Aligned_cols=315  Identities=16%  Similarity=0.168  Sum_probs=239.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|||+.|.+    +.++ ++.+.+++.++...  ...|++..+ +++|+++++++.      +++++|++  ++|+++
T Consensus        19 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~--~~G~~~   82 (346)
T TIGR01141        19 KEVIKLNSNEN----PFGP-PPKAKEALRAEADK--LHRYPDPDP-AELKQALADYYG------VDPEQILL--GNGSDE   82 (346)
T ss_pred             CceEEccCCCC----CCCC-CHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHhC------cChHHEEE--cCCHHH
Confidence            46999999987    3333 68889988877532  266866555 899999999974      23688999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++..+.  ...+.+||+|++++|+|+.+...++..|.+++.+++.  .++.+|++.+++.+.+   +++++++++|+|||
T Consensus        83 ~l~~~~--~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~---~~~~v~l~~p~Npt  155 (346)
T TIGR01141        83 IIELLI--RAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLD--EDGQLDLEDILVAIDD---KPKLVFLCSPNNPT  155 (346)
T ss_pred             HHHHHH--HHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccC--CCCCCCHHHHHHhcCC---CCCEEEEeCCCCCC
Confidence            998773  3346799999999999999988888999999999883  3467899999987653   66777778999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.++++++++.|+ +++++|+|++|.++...+   ...   ......+++++++|+||.+|++|+|+||+++   +
T Consensus       156 G~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~~~---~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~  225 (346)
T TIGR01141       156 GNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---STL---PLLAEYPNLIVLRTLSKAFGLAGLRIGYAIA---N  225 (346)
T ss_pred             CCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---cHH---HHHhhCCCEEEEehhhHhhhchhhhceeeec---C
Confidence            99999999999999887 799999999999776431   111   1223345789999999999999999999854   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccccc
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFIL  352 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~  352 (410)
                      +++++++..    ...  ..+.+..+|.++..++++.+       +.++.+++++++++.+.+.|+ ++ |    +... 
T Consensus       226 ~~~~~~~~~----~~~--~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~g----~~~~-  286 (346)
T TIGR01141       226 AEIIDALNK----VRA--PFNLSRLAQAAAIAALRDDD-------FIEKTVEEINAERERLYDGLK-KLPG----LEVY-  286 (346)
T ss_pred             HHHHHHHHh----ccC--CCCCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHH-hcCC----CEEC-
Confidence            776555443    222  22456677787777777643       246788889999999999998 77 4    3433 


Q ss_pred             CCcceeeecCCC---HHHHHHhhhcCcEEEcCC-------C--eEEecCCCcccHHHHHHHHH
Q 015283          353 RQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAII  403 (410)
Q Consensus       353 ~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~~i~~~~~~l~  403 (410)
                      +..++|+|+.+.   .++.+.+. ++||.+.|+       +  |+|++  ++++++++++.|+
T Consensus       287 ~~~g~~~~~~~~~~~~~~~~~L~-~~gI~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l~  346 (346)
T TIGR01141       287 PSDANFVLIRFPRDADALFEALL-EKGIIVRDLNSYPGLPNCLRITVG--TREENDRFLAALR  346 (346)
T ss_pred             CCcCCEEEEecCCCHHHHHHHHH-HCCeEEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHhC
Confidence            445778887653   34455555 479999875       2  99975  6889999988763

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.8e-36  Score=283.11  Aligned_cols=311  Identities=15%  Similarity=0.123  Sum_probs=229.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...++|+.|++    ..++ ++.+     . .. . ...|++ .+.++||+++++++.      +++++|++  |+|+++
T Consensus        31 ~~~~~l~~ne~----~~~~-~~~~-----~-~~-~-~~~Yp~-~~~~~Lr~aia~~~~------~~~~~I~i--t~Gs~~   88 (354)
T PRK04635         31 RGDIWINANES----PFNN-EYKL-----D-LA-R-LNRYPE-CQPPELINAYSAYAG------VAPEQILT--SRGADE   88 (354)
T ss_pred             CCcEEeeCCCC----CCCC-Chhh-----h-hH-H-hccCCC-CCHHHHHHHHHHHhC------cCHHHEEE--eCCHHH
Confidence            35689998886    3222 2222     1 11 2 266854 468999999999852      34899999  999999


Q ss_pred             HHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++.+++..  .+.+| |+|++++|+|..|...++..|++++.+|+.  +++.+|++.++. + .   +++++++++||||
T Consensus        89 ~i~~~~~~--~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~-~---~~~li~i~nP~NP  159 (354)
T PRK04635         89 AIELLIRA--FCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L-D---GAKLVFICNPNNP  159 (354)
T ss_pred             HHHHHHHH--hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c-c---CCCEEEEeCCCCC
Confidence            99998433  35688 899999999999999999999999999983  357788888763 3 2   5667778999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|++.|+  +++||+||+|.+|...   .   +...+....+++++++||||.+|++|+|+||+++   
T Consensus       160 TG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~---~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~---  228 (354)
T PRK04635        160 TGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE---Y---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLA---  228 (354)
T ss_pred             CCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC---c---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhC---
Confidence            999999999999998877  4999999999988732   1   2223334557899999999999999999999854   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++.+..    ... . .+.+...+.++..+|.+...     +.+++.++.++++++++.+.|+ +++.   +.+.+
T Consensus       229 ~~~~~~~l~~----~~~-~-~~~~~~~~~~a~~~l~~~~~-----~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~  293 (354)
T PRK04635        229 NEELIEILMR----VIA-P-YPVPLPVSEIATQALSEAGL-----ARMKFQVLDLNAQGARLQAALS-MYGG---AKVLE  293 (354)
T ss_pred             CHHHHHHHHh----hcC-C-CCCCHHHHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC---ceECC
Confidence            7776655443    211 1 24555667777777765432     2345667788999999999998 7752   35555


Q ss_pred             CCcceeeecCC-CHHHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHH
Q 015283          353 RQIGMFSFTGL-NKAQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       353 ~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      ++ |.|+|+.+ +.+.+.++++++||.+.++      +  |||++  +.++++.++++|++
T Consensus       294 ~~-g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~  351 (354)
T PRK04635        294 GN-GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRN  351 (354)
T ss_pred             CC-CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence            54 67888766 4444555566689998643      2  99985  58999999999875

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3.8e-35  Score=278.39  Aligned_cols=313  Identities=16%  Similarity=0.165  Sum_probs=227.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec-CChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t-~ggt  112 (410)
                      .++|+|+.|++    ..+ .+|.+.+++.+....  ...|++. ..+++|+++++++.      +++++|++  + +|++
T Consensus        34 ~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~~------~~~~~i~~--~~~Ga~   97 (361)
T PRK00950         34 ESIIKLGSNEN----PLG-PSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYTG------VPVENIIV--GGDGMD   97 (361)
T ss_pred             cceEEccCCCC----CCC-CCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHhC------CCHHHEEE--eCCCHH
Confidence            37899999976    222 257788887766543  2567554 44899999999963      23677766  4 5566


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++..+..  ..+.+||.|++++|+|+.+...++..|++++.++.  ++++.+|++.+++.+..   +++++++++|+||
T Consensus        98 ~~i~~~~~--~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~---~~~~v~~~~p~np  170 (361)
T PRK00950         98 EVIDTLMR--TFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITE---KTKVIFLCTPNNP  170 (361)
T ss_pred             HHHHHHHH--HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhcc---CCCEEEEeCCCCC
Confidence            77777633  23569999999999999999888999999988885  45678999999988864   5666666899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.++++++   |+++|+++|+||+|.++...       ....+....+++++++||||.+|++|+|+||+++   
T Consensus       171 tG~~~~~~~l~~l---~~~~~~~li~De~y~~~~~~-------~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~---  237 (361)
T PRK00950        171 TGNLIPEEDIRKI---LESTDALVFVDEAYVEFAEY-------DYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFV---  237 (361)
T ss_pred             CCCCcCHHHHHHH---HHHCCcEEEEECchhhhCcc-------chHHHHHhcCCEEEEEeehHhhcCchhhcchhcC---
Confidence            9999999887776   67789999999999887621       1122334446899999999999999999999744   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++.+..    ... . .+.+.+++.++...+.+.++       +++.+++++++++.+.+.|.        +.+. 
T Consensus       238 ~~~~~~~~~~----~~~-~-~~~~~~~~~~a~~~l~~~~~-------~~~~~~~~~~~r~~l~~~l~--------~~~~-  295 (361)
T PRK00950        238 PEWLIDYYMR----AKT-P-FSLTRLSQAAAIAALSDKEY-------IEKSIEHGIKSREYLYNELP--------FKVY-  295 (361)
T ss_pred             CHHHHHHHHH----hcC-C-CCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHhhcC--------eeEC-
Confidence            7775555443    222 1 23556677777777765432       35666777778877776654        2333 


Q ss_pred             CCcceeeecCC---C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          353 RQIGMFSFTGL---N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       353 ~~~~~~~~~~~---~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      +.+++|+|+.+   + .++++.+.+ +||.+.|+        +  ||+++  +.++++++++.|+++++
T Consensus       296 ~~~~~~i~~~~~~~~~~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il~  361 (361)
T PRK00950        296 PSEANFVLVDVTPMTAKEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIVE  361 (361)
T ss_pred             CCcceEEEEECCCCCHHHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHhC
Confidence            45678888754   3 344666665 69999874        1  99986  56899999999998763

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=1.3e-35  Score=277.45  Aligned_cols=316  Identities=18%  Similarity=0.188  Sum_probs=232.3

Q ss_pred             CCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc
Q 015283           18 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV   97 (410)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~   97 (410)
                      +.|+..+++++. .+++++++|+.|.+    +.+  ++ ..+...    .. ...|++..+ +++|+++++++.      
T Consensus         2 ~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~--~~-~~~~~~----~~-~~~y~~~~~-~~lr~~la~~~~------   61 (330)
T TIGR01140         2 GGNLRRAAARYG-IPPEDWLDFSTGIN----PLG--PP-VPPIPA----SA-WARYPDPEY-DELRAAAAAYYG------   61 (330)
T ss_pred             CccHHHHHHHcC-CChhheeEccccCC----CCC--CC-hhhcch----HH-HhhCCCccH-HHHHHHHHHHhC------
Confidence            456777776653 23457899999986    222  22 222111    12 366866655 999999999963      


Q ss_pred             ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283           98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA  177 (410)
Q Consensus        98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~  177 (410)
                      +++++|++  |+|+++++..+.   ..+.+| .|++++|+|..|...++..|.+++.++         |++.+++.+.+ 
T Consensus        62 ~~~~~i~~--t~G~~~~i~~~~---~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~~-  125 (330)
T TIGR01140        62 LPAASVLP--VNGAQEAIYLLP---RLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALEE-  125 (330)
T ss_pred             CChhhEEE--CCCHHHHHHHHH---HHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhccc-
Confidence            23789999  999999998863   335677 799999999999999999998887775         67888887743 


Q ss_pred             CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                         +.++++++|+||||.+++.+++++|+++|+++|++||+||+|.++...   .   ++..+.+..+++++++|+||.+
T Consensus       126 ---~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~---~---~~~~~~~~~~~~i~~~S~SK~~  196 (330)
T TIGR01140       126 ---LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD---A---SLAPQAARFPGLVVLRSLTKFF  196 (330)
T ss_pred             ---CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc---c---chhhHhccCCCEEEEEecchhh
Confidence               335666899999999999999999999999999999999999988743   1   2222233456899999999999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      |++|+|+||+++   ++++++++..    ... .+ +++..+|.++..++++.++       .++.+++++++++.+.+.
T Consensus       197 g~~G~R~G~i~~---~~~~~~~l~~----~~~-~~-~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~  260 (330)
T TIGR01140       197 GLAGLRLGFVVA---HPALLARLRE----ALG-PW-TVNGPARAAGRAALADTAW-------QAATRARLAAERARLAAL  260 (330)
T ss_pred             cCchhhhhheeC---CHHHHHHHHh----cCC-CC-CchHHHHHHHHHHHhchHH-------HHHHHHHHHHHHHHHHHH
Confidence            999999999854   6775555443    221 22 4566778888888886543       245678899999999999


Q ss_pred             hhhccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHH
Q 015283          338 LSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAI  402 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l  402 (410)
                      |+ +++.   +.. .+.+++|.|+.+  ..++.+++++ +||.+.|+.          ||+++. +.++ +.++++|
T Consensus       261 L~-~~~~---~~~-~~~~~~f~~~~~~~~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l  329 (330)
T TIGR01140       261 LA-RLGG---LEV-VGGTALFLLVRTPDAAALHEALAR-RGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL  329 (330)
T ss_pred             HH-hCCC---ceE-CCCCCeEEEEEcCCHHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence            98 8762   233 345789999876  2455667766 699998862          999976 4444 7766665

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=1.3e-34  Score=268.35  Aligned_cols=292  Identities=13%  Similarity=0.162  Sum_probs=205.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|+|+.|++    ..  .|+.+.+++.+....  ...|+.   ...+|+++++++.         ++|++  |+|+++
T Consensus         8 ~~~i~l~~~~n----p~--~p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~v--t~G~~~   65 (311)
T PRK08354          8 EGLIDFSASVN----PY--PPEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVI--TAGITE   65 (311)
T ss_pred             cceeEecCCCC----CC--CCHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEE--CCCHHH
Confidence            36899999875    22  257788888776543  256742   5679999999962         46888  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.++.   ..+.+||+|++++|+|+.|...++..|.+++.++        +|++.+++.+++    +.++++++|||||
T Consensus        66 al~~~~---~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~~----~~~vi~~~P~NPT  130 (311)
T PRK08354         66 ALYLIG---ILALRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVER----NSVVFFCNPNNPD  130 (311)
T ss_pred             HHHHHH---HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhcC----CCEEEEecCCCCC
Confidence            998763   3345999999999999999999999999886653        478888877653    3456669999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++|+++|+++|+++|+||+|.+|.+++   .  ..     ..+++++++||||+|++||+|+||+++    
T Consensus       131 G~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~---~--~~-----~~~~vi~~~S~SK~~~l~GlRiG~~v~----  196 (311)
T PRK08354        131 GKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP---E--SP-----EGENIIKLRTFTKSYGLPGIRVGYVKG----  196 (311)
T ss_pred             CCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc---c--cc-----CCCcEEEEeccHhhcCCccceeeeeee----
Confidence            999999999999999999999999999999998642   1  11     246899999999999999999999843    


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                        ..+.+    +.... .+ ..+..++.++..++.+. +     +++++.++.+++.++.+.+.+.           .++
T Consensus       197 --~~~~l----~~~~~-~~-~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~l~~~l~-----------~~~  251 (311)
T PRK08354        197 --FEEAF----RSVRM-PW-SIGSTGYAFLEFLIEDD-F-----EHLRKTMPLIWREKERFEKALY-----------VKS  251 (311)
T ss_pred             --hHHHH----HHcCC-Cc-cCCHHHHHHHHHHHHhH-H-----HHHHHHHHHHHHHHHHHHHhcC-----------CCC
Confidence              22333    22222 22 23334455555555532 1     2233444445544444433221           235


Q ss_pred             CcceeeecCC-C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHH
Q 015283          354 QIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       354 ~~~~~~~~~~-~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      .++++. ... + .++++.+ .++||.+.||.        ||+++.  .++.+++++.|+++
T Consensus       252 ~~~~~~-~~~~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~~  309 (311)
T PRK08354        252 DANFFI-KDVGDAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRD--REENEKLIRALREW  309 (311)
T ss_pred             CCcEEE-EECCCHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCC--HHHHHHHHHHHHHh
Confidence            555555 444 3 3445555 45799999873        999964  56678888888775

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.9e-33  Score=236.56  Aligned_cols=362  Identities=16%  Similarity=0.125  Sum_probs=259.2

Q ss_pred             ceecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHH----HHhhccC----CCccCcC
Q 015283            4 AVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE----NLMLERG----ENKEYLP   75 (410)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~----~~~~~~~----~~~~y~~   75 (410)
                      |+.|++++++.+++-|    +.   +..+.++.|.|+-|.|    ..   .|++.+.+    .+.+.++    ...+|..
T Consensus         7 Gdkft~~sGi~~lMdD----l~---d~Lrt~g~imLggGNP----a~---iPem~~~f~~~~aemla~~~~~e~~cnY~~   72 (417)
T COG3977           7 GDKFTRHSGITQLMDD----LN---DGLRTPGAIMLGGGNP----AR---IPEMDDYFQDLLAEMLASGKATEALCNYDG   72 (417)
T ss_pred             hHHhhhhhhHHHHHHH----HH---hhccCCCceeeCCCCc----cc---ChhHHHHHHHHHHHHHhcchHHHHHhcCCC
Confidence            6788889888887764    22   3334467899998876    22   35555444    4444332    2478999


Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC-CCC--EEEE-cCCCCcchhhhhhh----
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGA--KVLI-SSPTWGNHKNIFND----  147 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~-~gd--~Vl~-~~p~y~~~~~~~~~----  147 (410)
                      ++|...|.+++++.+.+.+|+++++.||.+  |+|++.+..-+++++.-.. .|+  +|+. ..|.|.+|....-.    
T Consensus        73 pQG~~~li~ala~~l~~~ygwnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~f  150 (417)
T COG3977          73 PQGKAVLIDALAKMLRREYGWNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLF  150 (417)
T ss_pred             CcchhHHHHHHHHHHHHHhCCCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccce
Confidence            999999999999999999999999999999  9999999999877776533 553  5555 46899888654331    


Q ss_pred             --CCCCccceeeecCC--CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC
Q 015283          148 --ARVPWSEYRYYDPK--TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ  223 (410)
Q Consensus       148 --~g~~~~~v~~~~~~--~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~  223 (410)
                        +..++..++   ..  .+..|++++.-  .   +.+-+++++.|.||||.+++.+|+.+|..+|++||+.+++|.+|.
T Consensus       151 Vs~kP~iel~~---~g~FKY~vDF~~l~i--~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg  222 (417)
T COG3977         151 VSAKPNIELLP---AGQFKYHVDFEHLHI--G---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYG  222 (417)
T ss_pred             eeccCCccccc---ccceeeccCHHHccc--c---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccC
Confidence              222222222   11  13456666643  2   367788889999999999999999999999999999999999987


Q ss_pred             CCCCCCCCCchhHhHHH-hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH
Q 015283          224 GFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI  302 (410)
Q Consensus       224 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (410)
                      --..+ .     .+... .-..++++.+.|+||. |+||.|+|-++.   +++    +.+.+.++.......|...++.+
T Consensus       223 ~PFP~-i-----ifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIa---ne~----viqaitnmn~iisLap~~~G~Ai  288 (417)
T COG3977         223 VPFPG-I-----IFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIA---NEK----VIQAITNMNGIISLAPGRMGPAI  288 (417)
T ss_pred             CCCCc-e-----ecccccccCCCCEEEEeehhhc-CCCCcceeEEEc---cHH----HHHHHHhccceeeecCCCccHHH
Confidence            54322 1     11111 1245699999999995 899999999755   777    45545555444445778888888


Q ss_pred             HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-----CCHHHHHHhhhcCcE
Q 015283          303 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-----LNKAQSDNMTNKWHV  377 (410)
Q Consensus       303 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi  377 (410)
                      ++.+++.+++.+.-+   +-+|-.|+++.+...+.|++.++ ...+.+.+|.+++|+|+-     ++...+.+.+|+.||
T Consensus       289 a~~mie~gdl~rlse---qVIrPFY~~~~q~~~~~l~~~lp-~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gv  364 (417)
T COG3977         289 AAEMIESGDLLRLSE---QVIRPFYRNRVQTTIAILRRYLP-EYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGV  364 (417)
T ss_pred             HHHHhhcchHHHHHH---HhhhHHHHHHHHHHHHHHHHhcC-ccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeE
Confidence            999999887754322   34455666666666666653444 233678899999998873     355555445566799


Q ss_pred             EEcCCC-----------------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          378 YMTKDG-----------------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       378 ~v~~~g-----------------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .++||.                 |+++.. +++.++..+++|.+.+++
T Consensus       365 l~VPG~~FFpGl~~ewpH~hqC~Rmn~~~-~~~~ie~Gva~lae~ve~  411 (417)
T COG3977         365 LMVPGHYFFPGLDKEWPHTHQCMRMNYVP-EPEKIEKGVAILAEEVER  411 (417)
T ss_pred             EEecccccCCCCCCCCCCccceEEEecCC-CHHHHHHHHHHHHHHHHH
Confidence            999982                 999987 899999999999888765

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1e-31  Score=237.45  Aligned_cols=337  Identities=16%  Similarity=0.136  Sum_probs=257.6

Q ss_pred             cHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC-CCCE
Q 015283           54 LDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAK  130 (410)
Q Consensus        54 ~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~-~gd~  130 (410)
                      |..+++.....++.  +....|....|++-.|+.+|+++.+.+|.+.++++|.+  |.|++.|+..+..++  +. +.+.
T Consensus        88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~il~l~--~~~~~~G  163 (475)
T KOG0258|consen   88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSILSLL--IAGKKTG  163 (475)
T ss_pred             CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHHHHHH--hcCCCCc
Confidence            34444444444422  34577999999999999999999999998899999999  999999999975544  44 7799


Q ss_pred             EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 015283          131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADV  208 (410)
Q Consensus       131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~  208 (410)
                      |++|-|.|+-|...+..+|...+.+.+.++.+|.+|.+++++.+.+.  .-+.+++++-||.||||+++|.+.+++|+.+
T Consensus       164 vliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~f  243 (475)
T KOG0258|consen  164 VLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICF  243 (475)
T ss_pred             eEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHH
Confidence            99999999999999999999999999988899999999999887663  2345666667899999999999999999999


Q ss_pred             HHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc----CC---cEEEEecccccc-cccCCCcceEEEEeCCchhHHHH
Q 015283          209 IQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR----GM---ELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       209 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~----~~---~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      |.++++.++.||+|++..+.+ +...+++.+.+.+    ..   ..+.++|.||.+ |-.|.|-||+-++.-+++..+.+
T Consensus       244 a~~~~l~llaDEVYQ~Nvy~~-~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi  322 (475)
T KOG0258|consen  244 AAEEGLVLLADEVYQDNVYTT-GSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQI  322 (475)
T ss_pred             HHHcCeEEechHHHHhhccCC-CcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHH
Confidence            999999999999999998763 3345566554322    11   456678889986 66899999998766677765555


Q ss_pred             HHHHHhhccCcccCCChhHHHHHHHHhCC----hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcc
Q 015283          281 KSQLKRLARPMYSNPPVHGARIVANVVGN----PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIG  356 (410)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~  356 (410)
                      .+...     ....++..+|.......+-    ....+.|..+...+...++++...+.+.+. ++..   +.+.+++++
T Consensus       323 ~Kl~s-----i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~n-s~~g---i~cn~~qGA  393 (475)
T KOG0258|consen  323 KKLAS-----IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFN-SLEG---ISCNPVQGA  393 (475)
T ss_pred             HHHHh-----hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHh-hcCc---eeeccCccc
Confidence            55333     2234555555544444442    123445666777888889999999999998 7742   689999999


Q ss_pred             eeeecCC---------------CHH-H-HHHhhhcCcEEEcCCC-----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          357 MFSFTGL---------------NKA-Q-SDNMTNKWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       357 ~~~~~~~---------------~~~-~-~~~ll~~~gi~v~~~g-----------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +|+|..+               .++ + +.+||+..||+++||.           |.++-.  .. + +.++++++.-++
T Consensus       394 MY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~fH~~  469 (475)
T KOG0258|consen  394 MYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKFHAE  469 (475)
T ss_pred             eeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHHHHH
Confidence            9998743               333 3 6799999999999982           888743  23 4 777777766443

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=4e-32  Score=243.77  Aligned_cols=323  Identities=16%  Similarity=0.114  Sum_probs=244.9

Q ss_pred             CccCcCCcccHHHHHHHHHHhcCCCCCc-ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC
Q 015283           70 NKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA  148 (410)
Q Consensus        70 ~~~y~~~~g~~~lr~aia~~~~~~~~~~-~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~  148 (410)
                      ..+|++..|.+++...+.++.....+.+ +..=+|++  |+|.|.+++.+.+.+  +++||.|++..++|++.....+..
T Consensus        93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~~l~~~--~N~gd~vlie~~ty~~AL~s~~a~  168 (472)
T KOG0634|consen   93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFKVLRTL--INRGDHVLIEEYTYPSALQSMEAL  168 (472)
T ss_pred             hhccccccCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHHHHHHh--hcCCCceEEecccchHHHHhcccc
Confidence            4789999999999999999744233333 33336877  999999999984444  889999999999999999999999


Q ss_pred             CCCccceeeecCCCcccChhhHHHHHhcC-------CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283          149 RVPWSEYRYYDPKTVGLDFEGMIADIKAA-------PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA  221 (410)
Q Consensus       149 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-------~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea  221 (410)
                      |++++.|++   +..++++|.|++.+..-       +...+++.+++-+||||..++.+..++|.++|++|+.+||+||.
T Consensus       169 gv~~ipv~m---d~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp  245 (472)
T KOG0634|consen  169 GVKIIPVKM---DQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP  245 (472)
T ss_pred             CceEEeccc---cCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence            999988887   44568999999888652       12345556888899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC------chhHhHHHh----------hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          222 YQGFASGSLDN------DASSVRLFA----------TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       222 y~~~~~~~~~~------~~~~~~~~~----------~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      |..+-++.+++      ...+.+.+.          +...+||...||||.++ ||+|+||+.+   ++-.++++...  
T Consensus       246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~---~~~~l~ril~~--  319 (472)
T KOG0634|consen  246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITG---NSLFLKRILDL--  319 (472)
T ss_pred             cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeec---CHHHHHHHhhh--
Confidence            98776553211      111111111          23459999999999997 9999999644   77655554433  


Q ss_pred             hhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-
Q 015283          286 RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-  364 (410)
Q Consensus       286 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-  364 (410)
                        ...++.+|+.+.|.+.-.+|+.-. .+-|.+.+.+.+..|.+++.++..++.+.++. ..+++.+|.+|+|+|+.++ 
T Consensus       320 --ae~~t~~pSg~sq~iv~a~l~~wg-qeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~-~~~~~~~P~aGmFiwv~i~~  395 (472)
T KOG0634|consen  320 --AEVATSGPSGFSQGIVYAMLKRWG-QEGFLRWIQHLRSSYTERRNALLSALDKYLPK-SVCEYHPPKAGMFIWVEIPY  395 (472)
T ss_pred             --cceeecCcccccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CeeEEecCCcceEEEEEecc
Confidence              233455788888888766666322 12356677899999999999999988733442 1267889999999998652 


Q ss_pred             ------------HHHHHHhhhcCcEEEcCCC---------------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          365 ------------KAQSDNMTNKWHVYMTKDG---------------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       365 ------------~~~~~~ll~~~gi~v~~~g---------------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                                  .+.....+.+.||.+++|.               |++++..+.|+++++++++..++++.
T Consensus       396 ~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~  467 (472)
T KOG0634|consen  396 INFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH  467 (472)
T ss_pred             cccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence                        2345555567899998872               99998888999999999999998763

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=100.00  E-value=8.6e-32  Score=259.37  Aligned_cols=362  Identities=11%  Similarity=0.055  Sum_probs=247.3

Q ss_pred             CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeee-cCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283           12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYR-TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      ++++++|..+..+..+.+.  ..+.++|+|++|+|. |....+. ...+.++..+++..+. ..|++..|.++||+++++
T Consensus        12 r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~-t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~   89 (460)
T PRK13238         12 RIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSG-TGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKD   89 (460)
T ss_pred             eeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCC-chhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHH
Confidence            4556666666666655443  335689999999983 2222211 1246666666554444 789999999999999999


Q ss_pred             HhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC------CC
Q 015283           89 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP------KT  162 (410)
Q Consensus        89 ~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~------~~  162 (410)
                      ++..        +++++  |+||++|+.++  +...+.||| |++++|.|..|...++..|++++.+++.+.      +.
T Consensus        90 ~~~~--------~~vv~--t~ggt~A~~~~--~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~  156 (460)
T PRK13238         90 IFGY--------PYTIP--THQGRAAEQIL--FPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHP  156 (460)
T ss_pred             HhCC--------CcEEE--CCCHHHHHHHH--HHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEecccccccccccc
Confidence            9743        45777  99999999998  444588999 999999999999999999999999988531      23


Q ss_pred             c--ccChhhHHHHHhcCC-CCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCC--CCCCC-C--CCc
Q 015283          163 V--GLDFEGMIADIKAAP-GGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQG--FASGS-L--DND  233 (410)
Q Consensus       163 ~--~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~--~~~~~-~--~~~  233 (410)
                      |  .+|++.+++.+.+.+ ++++++++++|+|||| .+++.+++++|.++|++||++||+|+++..  ..+.. .  ...
T Consensus       157 f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~  236 (460)
T PRK13238        157 FKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYK  236 (460)
T ss_pred             ccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhcccccc
Confidence            4  499999999997532 3688888899999997 999999999999999999999999997632  21110 0  001


Q ss_pred             hhHhHHHhhcCCcEEEEecccccccccCCCcc-----eEEEEeCCchhHHHHHHHHHhhccC-cccCCChhHHHHHHHHh
Q 015283          234 ASSVRLFATRGMELLVAQSYSKNLGLYAERIG-----AMNVVCSSSDLAARVKSQLKRLARP-MYSNPPVHGARIVANVV  307 (410)
Q Consensus       234 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G-----~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~l  307 (410)
                      ..++...      +..++|++|.+.++|+|+|     +++ .++++++++++....-..... ++.+.+...|.+++..|
T Consensus       237 ~~si~~i------~~~~~s~~D~~~~Sg~K~g~~~~GG~i-~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l  309 (460)
T PRK13238        237 DKSIKEI------AREMFSYADGLTMSAKKDAMVNIGGLL-CFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGL  309 (460)
T ss_pred             CCCHHHH------hhhhcccCcEEEEecccCCCCcceeEE-EcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhH
Confidence            1111111      2334677777777777763     332 334456555543322111111 23333343355555444


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhc
Q 015283          308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNK  374 (410)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~  374 (410)
                      .+. ..       +...+...+++++|.+.|. +.|    +.+..|.+|+|+|++.             +.+++.+|+++
T Consensus       310 ~e~-~~-------~~~~~~~~~~~~~l~~~L~-~~G----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e  376 (460)
T PRK13238        310 YEG-MD-------EDYLAYRIGQVEYLGEGLE-EAG----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLE  376 (460)
T ss_pred             HHh-hC-------hHHHHHHHHHHHHHHHHHH-HCC----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHH
Confidence            321 00       1112222335788999998 887    5778899999998754             24568899999


Q ss_pred             CcEEEcCCC---------------------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          375 WHVYMTKDG---------------------RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       375 ~gi~v~~~g---------------------Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                      .||.+.|+|                     |++++.  .|.++++.++++|+++.++
T Consensus       377 ~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~  433 (460)
T PRK13238        377 AGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN  433 (460)
T ss_pred             cCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence            999998852                     898874  4899999999999988643

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=5.7e-31  Score=248.79  Aligned_cols=332  Identities=20%  Similarity=0.219  Sum_probs=242.1

Q ss_pred             eeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283           37 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR  116 (410)
Q Consensus        37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~  116 (410)
                      +||+.|.+    .+.. ++.+.....+.........|.+..|..++++++++++...++.....+++++  ++|+++++.
T Consensus         1 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~~   73 (350)
T cd00609           1 IDLSIGEP----DFPP-PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEALS   73 (350)
T ss_pred             CCCCCCCC----CCCC-CHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHHH
Confidence            46777776    2222 3444444433112222366888999999999999999776654445678888  999999998


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh--hhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          117 LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF--EGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       117 ~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~--~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                      .+...+  ..+||+|+++.|+|.++...++..|.+++.+++.+.  ...+.  +.++....   +++.++++++|+||||
T Consensus        74 ~~~~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG  146 (350)
T cd00609          74 LLLRAL--LNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE--GGFLLDLELLEAAKT---PKTKLLYLNNPNNPTG  146 (350)
T ss_pred             HHHHHh--CCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccc--cCCccCHHHHHhhcC---ccceEEEEECCCCCCC
Confidence            874333  568999999999999999999999999999988432  22332  44444433   3566777777999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .+++.+++++|+++|+++|+++|+|++|+++.+.+...   .........+.+++++|++|.++.+|.|+||+++   ++
T Consensus       147 ~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~---~~  220 (350)
T cd00609         147 AVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP---PALALLDAYERVIVLRSFSKTFGLPGLRIGYLIA---PP  220 (350)
T ss_pred             cccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc---ccccCcCccCcEEEEeecccccCCcccceEEEec---CH
Confidence            99999999999999999999999999998877542111   1011123445789999999999989999999844   55


Q ss_pred             -hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          275 -DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       275 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                       ++.+.+.....    ..+.+++..++.++...++...      +..++.+++++++++++.+.|. +.+.   .....+
T Consensus       221 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~  286 (350)
T cd00609         221 EELLERLKKLLP----YTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALK-ELGP---LVVVKP  286 (350)
T ss_pred             HHHHHHHHHHHH----hcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHH-hcCC---ccccCC
Confidence             65565544332    3345667777777777777542      3356888889999999999998 7763   121456


Q ss_pred             CcceeeecCCC----HHHHHHhhhcCcEEEcCC------C----eEEecCCCcccHHHHHHHHH
Q 015283          354 QIGMFSFTGLN----KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYLADAII  403 (410)
Q Consensus       354 ~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~------g----Ris~~~~~~~~i~~~~~~l~  403 (410)
                      .+++++|+.+.    ...+.++++++||.+.++      +    ||+++.. ++++++++++|+
T Consensus       287 ~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~  349 (350)
T cd00609         287 SGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA  349 (350)
T ss_pred             CccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence            77888887652    456777778789999876      2    9999885 899999999886

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.96  E-value=1.2e-27  Score=227.38  Aligned_cols=336  Identities=12%  Similarity=0.089  Sum_probs=227.8

Q ss_pred             CCCCeeeeeeeeee----cCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           32 TDEKKLNLGVGAYR----TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        32 ~~~~~i~l~~g~~~----~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .+..++.|.+++++    +..++    ..+.++...++..+. ..|.+..|..+|++++++++..        +++++  
T Consensus         9 ~g~n~~~l~~~~v~iDlltds~t----~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g~--------~~vv~--   73 (431)
T cd00617           9 AGYNVFLLRSEDVYIDLLTDSGT----GAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFGF--------KHIIP--   73 (431)
T ss_pred             cCCCEEeCCCCCcCCCCCCCCCc----HHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHCC--------CeEEE--
Confidence            34678888888772    22222    233333333332333 5699999999999999999733        46777  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC--------CcccChhhHHHHHhcC-C
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAA-P  178 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~-~  178 (410)
                      |+||++|+.++  +...+.|||.| +++|.|..+...+...|++++.+++.+..        .+.+|++++++.+.+. .
T Consensus        74 t~~Gt~Al~la--~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~  150 (431)
T cd00617          74 THQGRGAENIL--FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA  150 (431)
T ss_pred             cCCHHHHHHHH--HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC
Confidence            99999999998  44457899987 68999999999999999999999885432        3459999999999863 2


Q ss_pred             CCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCCC--CC-----CCCCCchhHhHHHhhcCCcEEEE
Q 015283          179 GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF--AS-----GSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       179 ~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~--~~-----~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      .+++++++++|+||+ |++++.+++++|.++|++||++||+|++....  .+     ++.  ...++..      .++.+
T Consensus       151 ~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~--~~~si~e------i~~e~  222 (431)
T cd00617         151 ENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGY--RDKSIAE------IAREM  222 (431)
T ss_pred             CCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccc--cCCCHHH------HHHHh
Confidence            346777788999998 99999999999999999999999999994321  11     001  1111111      23445


Q ss_pred             ecccccccccCCC------cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAER------IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       251 ~S~sK~~~~~G~r------~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~  323 (410)
                      +|++|.+.++|+|      .||+  ++++++++++++..........+.+..+..+.++ +..|.+..      + .+..
T Consensus       223 ~s~sd~~~mS~~K~~~~~~GG~i--~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~------~-~~~l  293 (431)
T cd00617         223 FSYADGCTMSAKKDGLVNIGGFL--ALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV------E-EDYL  293 (431)
T ss_pred             hccCCEEEEEeecCCCCccceEE--EeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc------c-HHHH
Confidence            6778877777777      4576  4445567777654321111111112222222222 32443210      0 1223


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCC--------
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKD--------  382 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~--------  382 (410)
                      .++++ +++++.+.|. +.|    +.+..|.+++++|++.             ...++.+|+++.||.+..-        
T Consensus       294 ~~~~~-~r~~l~~~L~-~~G----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~  367 (431)
T cd00617         294 RHRVE-QVRYLGDRLD-EAG----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD  367 (431)
T ss_pred             HHHHH-HHHHHHHHHH-HCC----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccC
Confidence            33444 5588999999 888    5777889999999853             2345778999999986431        


Q ss_pred             ---C----------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          383 ---G----------RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       383 ---g----------Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                         |          |+++..  .|.++++.++++|++++++
T Consensus       368 ~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~  408 (431)
T cd00617         368 PNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER  408 (431)
T ss_pred             CCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence               1          888764  4899999999999998765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PLN02483 serine palmitoyltransferase

Probab=99.96  E-value=1.8e-27  Score=231.90  Aligned_cols=334  Identities=13%  Similarity=0.014  Sum_probs=217.7

Q ss_pred             CCeeeeeeeeeecCCCc-ccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQ-PYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~-~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ..++||++..||....+ +.+++.+.+++.+....  .....|+...++.++++++|+++..       ++.+++   ++
T Consensus       100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-------~~ai~~---~~  169 (489)
T PLN02483        100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-------PAAIVF---GM  169 (489)
T ss_pred             ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-------CcEEEE---CC
Confidence            46899999999866643 33567888888776432  2224477788899999999999753       466776   44


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----------CCC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----------PGG  180 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----------~~~  180 (410)
                      |..++..+  +...+.+||.|++++|+|.++...++..|++++.++..       |.+++++.+++.          +.+
T Consensus       170 G~~an~~~--i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~  240 (489)
T PLN02483        170 GYATNSTI--IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK  240 (489)
T ss_pred             HHHHHHHH--HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence            55555544  33457799999999999999999999999999998862       445555554321          112


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh--hcCCcEEEEeccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLG  258 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~~  258 (410)
                      .+++++....|++|.   ..++++|+++|++||++||+||+|+....+ ....  ++....  ...+.+|+++||||++|
T Consensus       241 k~livve~v~s~~G~---~~~l~~I~~la~~~~~~livDEa~s~g~~G-~~G~--g~~~~~~v~~~~~dI~~~SfSKs~g  314 (489)
T PLN02483        241 KIIVIVEGIYSMEGE---LCKLPEIVAVCKKYKAYVYLDEAHSIGAVG-KTGR--GVCELLGVDPADVDIMMGTFTKSFG  314 (489)
T ss_pred             eEEEEECCCCCCCCc---ccCHHHHHHHHHHcCCEEEEECcCccCccC-CCCC--chHHhcCCCcccCcEEEEecchhcc
Confidence            345666667799998   557888888899999999999998743322 1111  111111  12346899999999999


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH--HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      ++|   ||+++   ++++++.+.......... ...++...+.++  ...+...+.    .+...+.+++++++++++.+
T Consensus       315 ~~G---G~i~~---~~~li~~l~~~~~~~~~~-~~~~p~~~~~~~aaL~~l~~~~g----~~~~~~~~~~l~~~~~~l~~  383 (489)
T PLN02483        315 SCG---GYIAG---SKELIQYLKRTCPAHLYA-TSMSPPAVQQVISAIKVILGEDG----TNRGAQKLAQIRENSNFFRS  383 (489)
T ss_pred             cCc---eEEEc---CHHHHHHHHHhCcccccc-CCcCHHHHHHHHHHHHHHHhCcc----ccchHHHHHHHHHHHHHHHH
Confidence            877   99744   788666654432111111 112223232222  222221110    11224557789999999999


Q ss_pred             HhhhccCCCCCcccccCCcceeeec--CC---CHHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHH
Q 015283          337 SLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLA  399 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~~~~~~~~~~--~~---~~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~  399 (410)
                      .|+ ++|+    .+..+..++.+++  ..   ..++..++++ +||.+.+.         +  ||+++. .+++++++++
T Consensus       384 ~L~-~~G~----~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l  457 (489)
T PLN02483        384 ELQ-KMGF----EVLGDNDSPVMPIMLYNPAKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKAL  457 (489)
T ss_pred             HHH-HCCC----cccCCCCCCEEEEEECCHHHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHH
Confidence            999 8873    4443333334332  21   2345677776 59998742         1  888875 5899999999


Q ss_pred             HHHHHHhhhc
Q 015283          400 DAIIDSYHNV  409 (410)
Q Consensus       400 ~~l~~~l~~~  409 (410)
                      ++|+++++.+
T Consensus       458 ~~L~~~~~~~  467 (489)
T PLN02483        458 EVISEVGDLV  467 (489)
T ss_pred             HHHHHHHHHh
Confidence            9999987653

>PRK10534 L-threonine aldolase; Provisional

Probab=99.96  E-value=4e-27  Score=220.89  Aligned_cols=319  Identities=13%  Similarity=0.020  Sum_probs=206.2

Q ss_pred             eeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283           37 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR  116 (410)
Q Consensus        37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~  116 (410)
                      |+|+++..      |.++|.+.+++.+....  ...|.|..+..+|++++++++..        +.+.+  +.||++++.
T Consensus         2 ~~~~~~~~------~~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~g~--------~~~~v--~~~g~~a~~   63 (333)
T PRK10534          2 IDLRSDTV------TRPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSGK--------EAALF--LPTGTQANL   63 (333)
T ss_pred             cccccccC------CCCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHhCC--------CeEEE--eCchHHHHH
Confidence            56776654      33579999998775433  36787888899999999999532        23345  688888877


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCcc-hhhh-hhhCC-CCccceeeecCCCcccChhhHHHHHhcCC---CCcEEEEeCCCC
Q 015283          117 LAAALIERYFPGAKVLISSPTWGN-HKNI-FNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAH  190 (410)
Q Consensus       117 ~~~~~~~~~~~gd~Vl~~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~---~~~~~ii~~~p~  190 (410)
                      ++  +...+.+||+|+++.|+|.. |... ....+ .+++.++.  .+++.+|++++++.+.+..   .++++++++||+
T Consensus        64 ~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~  139 (333)
T PRK10534         64 VA--LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA--AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH  139 (333)
T ss_pred             HH--HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC--CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC
Confidence            76  34457799999999888753 3221 23333 56666665  3467899999998885410   146677777654


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                        ||.+++.+++++|+++|++|++++++||+|........+.   .........+.++  .||||.++++   +||.  +
T Consensus       140 --~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~---~~~~~~~~~~~~~--~s~SK~~~~~---~G~~--~  207 (333)
T PRK10534        140 --NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGC---ELKEITQYCDSFT--ICLSKGLGTP---VGSL--L  207 (333)
T ss_pred             --CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCC---CHHHHHhcCCEEE--EEeEcCCCCc---ccce--E
Confidence              6999999999999999999999999999976221100011   1111111112233  4899998754   6842  3


Q ss_pred             eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                      +.++++++.+.........  ..+.....+.++...|++.          .+..++..+.++++.+.|+ ++|    +.+
T Consensus       208 ~~~~~~i~~~~~~~~~~~~--~~~~~~~~~a~~~~~l~~~----------~~~~~~~~~~r~~l~~~L~-~~g----~~~  270 (333)
T PRK10534        208 VGNRDYIKRARRWRKMTGG--GMRQAGILAAAGLYALKHN----------VARLQEDHDNAAWLAEQLR-EAG----ADV  270 (333)
T ss_pred             EcCHHHHHHHHHHHHHhCC--chhhHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHH-hCC----Ccc
Confidence            3488877766553321100  0011223334443333321          1222234456788999998 887    455


Q ss_pred             ccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC--eEEec-CCCcccHHHHHHHHHHHhh
Q 015283          351 ILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG--RISLA-GLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       351 ~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g--Ris~~-~~~~~~i~~~~~~l~~~l~  407 (410)
                      .++ .++|+|+.+.   .+.+.++++++||.+.|+.  |++.+ ..+++++++++++|++.+.
T Consensus       271 ~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~l~~~~~  332 (333)
T PRK10534        271 MRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAHWRAFLA  332 (333)
T ss_pred             CCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence            656 4788888653   3455667777899999986  88754 3599999999999998764

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.96  E-value=1.4e-26  Score=222.75  Aligned_cols=331  Identities=11%  Similarity=0.066  Sum_probs=217.9

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      +.++|||+.|.++   +++. ++.+.+++.+.+....  ...|....|..++++++++++.+.++.   +++|++  ++|
T Consensus        41 g~~~i~l~~~~~~---~~~~-~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--tsG  111 (397)
T PRK06939         41 GKEVINFCANNYL---GLAN-HPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--SSC  111 (397)
T ss_pred             CCeEEEeeccCcc---ccCC-CHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--cCh
Confidence            4578999998742   3432 6788888877764421  122333468888888888887766553   356776  555


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHG  187 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~  187 (410)
                       ++++..+  +...+.+||.|++++|+|+.+...+...|.+++.++.       .|++.+++.+++   .+.++++++++
T Consensus       112 -~~a~~~~--~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~  181 (397)
T PRK06939        112 -FDANGGL--FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATD  181 (397)
T ss_pred             -HHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEe
Confidence             7777776  3344779999999999999999888888888877654       378888887764   12367777777


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcce
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      +.+||||.   .+++++|.++|++||++||+||+|.....+ ..... .. .... ..+.+++++|+||.++  |+|+||
T Consensus       182 ~v~~~~G~---~~~~~~l~~la~~~~~~li~De~~~~g~~~-~~~~~-~~-~~~~~~~~~~i~~~S~sK~~~--g~r~G~  253 (397)
T PRK06939        182 GVFSMDGD---IAPLPEICDLADKYDALVMVDDSHAVGFVG-ENGRG-TV-EHFGVMDRVDIITGTLGKALG--GASGGY  253 (397)
T ss_pred             cCcCCCCC---cCCHHHHHHHHHHhCCEEEEECcccccCcC-CCCCC-HH-HHcCCCCCCcEEEEECHHHhC--ccCceE
Confidence            78999998   567889999999999999999998532211 11111 11 1111 1235799999999984  569999


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCcccCC-ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYSNP-PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      +++   ++++++.+......   ..+.++ +...+.++...++..       +..++.+++++++++++.+.|. +.+  
T Consensus       254 v~~---~~~~~~~l~~~~~~---~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~~--  317 (397)
T PRK06939        254 TAG---RKEVIDWLRQRSRP---YLFSNSLAPAIVAASIKVLELL-------EESDELRDRLWENARYFREGMT-AAG--  317 (397)
T ss_pred             EEe---CHHHHHHHHHhCcc---ccccCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHH-HcC--
Confidence            854   77766665432111   112222 222222222222210       1124667888999999999998 776  


Q ss_pred             CCcccccCCcceeeec-CC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          346 KDWSFILRQIGMFSFT-GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~~~~~~~~~~~~~~-~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                        +....+.++++.+. +.   ..+++.+++++ ||.+.++       +    |++++. .+++++++++++|+++++++
T Consensus       318 --~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        318 --FTLGPGEHPIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             --CCcCCCCCCEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence              34444555554332 21   23456777765 9988642       1    888764 58999999999999998764

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.96  E-value=2.6e-26  Score=220.41  Aligned_cols=326  Identities=10%  Similarity=0.078  Sum_probs=213.0

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCc---cc----HHHHHHHHHHhcCCCCCcccCCceEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---GL----AAFNKVTAELLFGADNSVLKEQRVAT  105 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~----~~lr~aia~~~~~~~~~~~~~~~i~~  105 (410)
                      +.++|||+.|+|+   +.+. +|.+.+++.+++.... ..|++..   |.    .++++++++++..        +++++
T Consensus        37 g~~~i~~~~~~~l---g~~~-~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g~--------~~~ii  103 (393)
T TIGR01822        37 GREVLNFCANNYL---GLSS-HPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLGT--------EDTIL  103 (393)
T ss_pred             CceEEEeeCCCcc---ccCC-CHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhCC--------CcEEE
Confidence            4578999999875   3332 5677777766664311 2444433   64    7899999999643        34555


Q ss_pred             EecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcE
Q 015283          106 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSF  182 (410)
Q Consensus       106 ~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~  182 (410)
                        ++||++|+..+  +...+.+||.|++++|.|+.+...++..+.+...++       ..|++++++.+++.   +.+++
T Consensus       104 --~~~~~~a~~~~--~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~  172 (393)
T TIGR01822       104 --YASCFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHR  172 (393)
T ss_pred             --ECchHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCce
Confidence              68889998877  344478999999999999999988887776664433       26889998888752   22677


Q ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccC
Q 015283          183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYA  261 (410)
Q Consensus       183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G  261 (410)
                      ++++++++||||.+.+   +++|+++|++||+++|+||+|.....+ ....  +.....+ ..+.+++++|+||.++  |
T Consensus       173 ~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~-~~~~--~~~~~~~~~~~~di~~~s~sK~l~--g  244 (393)
T TIGR01822       173 LIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLG-PTGR--GSHELCGVMGRVDIITGTLGKALG--G  244 (393)
T ss_pred             EEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcC-CCCC--chHHhcCCCCCCeEEEEEChHHhh--C
Confidence            8888889999999654   678888899999999999998532221 1111  1111121 1245799999999875  7


Q ss_pred             CCcceEEEEeCCchhHHHHHHHHHhhccCcccC-CChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283          262 ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSN-PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA  340 (410)
Q Consensus       262 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  340 (410)
                      +|+||+++   ++++++.+.......   ..++ .+...+.++...++.       .+..++.+++++++++++.+.|+ 
T Consensus       245 ~r~G~~~~---~~~~~~~l~~~~~~~---~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~l~~~L~-  310 (393)
T TIGR01822       245 ASGGFTTA---RKEVVELLRQRSRPY---LFSNSLPPAVVGASIKVLEM-------LEASNELRDRLWANTRYFRERME-  310 (393)
T ss_pred             CCcEEEEe---CHHHHHHHHHhCccc---eecCCCCHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHH-
Confidence            89999754   778666654421111   1222 223222223323211       11235677889999999999998 


Q ss_pred             ccCCCCCcccccCCcceeeec-C--C-CHHHHHHhhhcCcEEEcC-------CC----eEEecC-CCcccHHHHHHHHHH
Q 015283          341 KDKSGKDWSFILRQIGMFSFT-G--L-NKAQSDNMTNKWHVYMTK-------DG----RISLAG-LSLAKCEYLADAIID  404 (410)
Q Consensus       341 ~~g~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~ll~~~gi~v~~-------~g----Ris~~~-~~~~~i~~~~~~l~~  404 (410)
                      +.|+    .+..+.+.++.+. .  . ..++...|++ +||.+..       .+    ||+++. .+++++++++++|++
T Consensus       311 ~~g~----~~~~~~~~~~~i~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~  385 (393)
T TIGR01822       311 AAGF----DIKPADHPIIPVMLYDAVLAQRFARRLLE-EGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR  385 (393)
T ss_pred             HcCC----CCCCCCCCEEEEEeCCHHHHHHHHHHHHH-CCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence            7763    4333333333221 1  1 2345666666 4998862       12    777654 389999999999999


Q ss_pred             Hhhhc
Q 015283          405 SYHNV  409 (410)
Q Consensus       405 ~l~~~  409 (410)
                      +++++
T Consensus       386 ~~~~~  390 (393)
T TIGR01822       386 IGREL  390 (393)
T ss_pred             HHHHh
Confidence            87654

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PLN02822 serine palmitoyltransferase

Probab=99.96  E-value=6.6e-27  Score=227.49  Aligned_cols=328  Identities=12%  Similarity=0.067  Sum_probs=220.0

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +.+++||+.|.+++..+    +|.+++++.+++.. +.     ...|.+..+..++++++++++..       ++.|++ 
T Consensus       108 G~~~id~~s~~~lgl~~----~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-------~~~i~~-  175 (481)
T PLN02822        108 GKDVVNFASANYLGLIG----NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-------PDSILY-  175 (481)
T ss_pred             CceEEEeECCCcCCCCC----CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence            35689999998754443    57777777776643 21     12467778899999999999742       467888 


Q ss_pred             ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---C---CCC
Q 015283          107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---A---PGG  180 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~---~~~  180 (410)
                       ++|++ ++..+  +.....+||.|++...+|..+...+...|.+++.+++.       |.+.++..+.+   .   +++
T Consensus       176 -s~G~~-a~~sa--i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~  244 (481)
T PLN02822        176 -SYGLS-TIFSV--IPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKK  244 (481)
T ss_pred             -CCHHH-HHHHH--HHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCC
Confidence             66666 55554  33346699999988888888877788888888888774       33344333321   1   122


Q ss_pred             -cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH-hhcCCcEEEEeccccccc
Q 015283          181 -SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       181 -~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~  258 (410)
                       ++++++.+++|+||.+.+   +++|+++|++||+++|+||+|+...++.... . ....+ ......+++++||||.+|
T Consensus       245 ~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~-G-~~e~~~v~~~~~dii~~s~sKalg  319 (481)
T PLN02822        245 LRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGR-G-LSEHFGVPIEKIDIITAAMGHALA  319 (481)
T ss_pred             CcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC-C-hHHHcCCCCCCCeEEEecchhhhh
Confidence             367888889999999888   6788888999999999999998555432111 1 11111 111246789999999999


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      ++|   ||+++   ++++++.+...   ....+++ +.|...+.++...|+..       +...+.+++++++++++.+.
T Consensus       320 ~~G---G~i~g---~~~ii~~~~~~---~~~~~fsa~lPp~~~~Aa~~aL~~l-------~~~~~~~~~l~~~~~~l~~~  383 (481)
T PLN02822        320 TEG---GFCTG---SARVVDHQRLS---SSGYVFSASLPPYLASAAITAIDVL-------EDNPSVLAKLKENIALLHKG  383 (481)
T ss_pred             hCC---eEEEc---CHHHHHHHHhc---CCceeeccccCHHHHHHHHHHHHHH-------HhCHHHHHHHHHHHHHHHHH
Confidence            888   88644   77765554321   1111233 33444445554444211       11246778899999999999


Q ss_pred             hhhcc-CCCCCcccccCCcceeeecCCC-------------HHHHHHhhhcCcEEEcCC------------C-eEEecC-
Q 015283          338 LSAKD-KSGKDWSFILRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKD------------G-RISLAG-  389 (410)
Q Consensus       338 l~~~~-g~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ll~~~gi~v~~~------------g-Ris~~~-  389 (410)
                      |+ +. |    +.+..+..++++++.+.             .++++++++++||.+.++            + ||+++. 
T Consensus       384 L~-~~~g----~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~  458 (481)
T PLN02822        384 LS-DIPG----LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAG  458 (481)
T ss_pred             HH-hcCC----cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCC
Confidence            98 75 4    45555556666665331             245778886679999854            1 887664 


Q ss_pred             CCcccHHHHHHHHHHHhhhc
Q 015283          390 LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .++++|++++++|++++.++
T Consensus       459 ~t~edI~~~~~~l~~~~~~~  478 (481)
T PLN02822        459 HTESDILKASESLKRVAASV  478 (481)
T ss_pred             CCHHHHHHHHHHHHHHHHHH
Confidence            49999999999999988763

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.96  E-value=8e-27  Score=224.14  Aligned_cols=325  Identities=14%  Similarity=0.090  Sum_probs=212.9

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccC-CCccCcC-------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERG-ENKEYLP-------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~-------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .|+|..+..++|+.+.+++.+.+... ....+.+       ....+++|+.+++++...     ++++|++  |+|+|++
T Consensus        18 iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~--t~g~t~~   90 (398)
T TIGR03392        18 VYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAP-----DAENIVW--TRGTTES   90 (398)
T ss_pred             EEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCChHHH
Confidence            45555566667899999988776321 1111211       123567999999997542     2578999  9999999


Q ss_pred             HHHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283          115 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC  188 (410)
Q Consensus       115 ~~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~  188 (410)
                      +.+++..+.  .+.+||+|++++|+|++    +...++..|++++.++..  .++.+|++.+++.+.+   +++++++++
T Consensus        91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~---~t~lv~i~~  165 (398)
T TIGR03392        91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG--ADLLPDIRQLPELLTP---RTRILALGQ  165 (398)
T ss_pred             HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHHhcc---CceEEEEEC
Confidence            999844332  24689999999999866    445567889999999873  3466899999998875   678888899


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      |+||||.+.+   +++|+++|+++|+++++|++|......   .   .+    ...+.++++.|.+|.+|++|  +||++
T Consensus       166 ~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~---~---~~----~~~~~d~~~~s~~K~~gp~G--~G~l~  230 (398)
T TIGR03392       166 MSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP---P---DV----QALDIDFYAFSGHKLYGPTG--IGVLY  230 (398)
T ss_pred             ccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC---C---Ch----hhcCCCEEEEecccccCCCc--eEEEE
Confidence            9999999765   567788899999999999997543321   1   11    11234677889999998766  79986


Q ss_pred             EEeCCchhHHHHHHHHHhh-----------------ccCcccCCChhHHH---HHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVKSQLKRL-----------------ARPMYSNPPVHGAR---IVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~---~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +   +++.++++.......                 .+...++++..+..   ++...+.+.        ..++++++.+
T Consensus       231 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~--------g~~~i~~~~~  299 (398)
T TIGR03392       231 G---KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDI--------DIAAAEAWSV  299 (398)
T ss_pred             E---cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHh--------CHHHHHHHHH
Confidence            5   677555542211000                 00001122222222   223333221        2346677788


Q ss_pred             HHHHHHHHHhhhccCCCCCccccc-CCcceeee--cCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFIL-RQIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG  389 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~  389 (410)
                      +.++++.+.|+ ++..   +.... +..+++.|  .+.+.+.+.+.++++||.+.+|              |  |+|+..
T Consensus       300 ~l~~~l~~~l~-~l~g---~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~  375 (398)
T TIGR03392       300 SLADLAEERLA-QLPG---FRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAP  375 (398)
T ss_pred             HHHHHHHHHHh-cCCC---eEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeec
Confidence            88888998887 6631   33332 33333332  2444444444456679998753              2  998764


Q ss_pred             -CCcccHHHHHHHHHHHhhhc
Q 015283          390 -LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 -~~~~~i~~~~~~l~~~l~~~  409 (410)
                       .|++|++++++.|+++++.+
T Consensus       376 ~~t~~ei~~l~~~l~~~~~~~  396 (398)
T TIGR03392       376 YNTQQDVDALVDAVGAALELL  396 (398)
T ss_pred             cCCHHHHHHHHHHHHHHHHHh
Confidence             38999999999999988754

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.95  E-value=7e-27  Score=224.74  Aligned_cols=328  Identities=16%  Similarity=0.132  Sum_probs=214.8

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCC-C-c--cCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGE-N-K--EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~--~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .|+|..+.+++++.+.+++.+.+.... . +  .+.    .....+++|+.+++++...     ++++|++  ++|+|++
T Consensus        21 ~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~--~~~~t~~   93 (401)
T PRK10874         21 VYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAP-----DAKNIVW--TRGTTES   93 (401)
T ss_pred             EEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE--ECCHHHH
Confidence            455566666778899999887764311 0 0  110    1223678899999987542     2688999  9999999


Q ss_pred             HHHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283          115 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC  188 (410)
Q Consensus       115 ~~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~  188 (410)
                      +.+++..+.  .+.+||+|++++|.|++    +...++..|++++.++.  ++++.+|++++++.+++   +++++++++
T Consensus        94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~i~~---~t~lv~i~~  168 (401)
T PRK10874         94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPL--GADRLPDVDLLPELITP---RTRILALGQ  168 (401)
T ss_pred             HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEec--CCCCcCCHHHHHHhcCc---CcEEEEEeC
Confidence            999854442  24699999999999865    44556778999999987  34567899999999865   678888899


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      |+||||.+.+   +++|+++|+++|+++++|++|...... .     .+    ...+.++++.|++|.+|++|  +||++
T Consensus       169 ~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~-~-----~~----~~~~~d~~~~s~~K~~gp~G--~G~l~  233 (401)
T PRK10874        169 MSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP-A-----DV----QALDIDFYAFSGHKLYGPTG--IGVLY  233 (401)
T ss_pred             CcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc-C-----Cc----hhcCCCEEEEecccccCCCc--cEEEE
Confidence            9999999775   557777799999999999997532211 1     11    12235688899999998777  48886


Q ss_pred             EEeCCchhHHHHHHHHHhh-----------------ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVKSQLKRL-----------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      +   +++.++++.......                 .+...++++..++.++...++   +..  .....+.+++.++.+
T Consensus       234 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~---~l~--~~g~~~~~~~~~~l~  305 (401)
T PRK10874        234 G---KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALE---WLA--DIDINQAESWSRSLA  305 (401)
T ss_pred             E---chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHH---HHH--HhCHHHHHHHHHHHH
Confidence            5   777655543211000                 000111233233333333322   100  112345677888888


Q ss_pred             HHHHHHhhhccCCCCCccccc-CCcceeee--cCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC-CC
Q 015283          332 QKLFDSLSAKDKSGKDWSFIL-RQIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG-LS  391 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~-~~  391 (410)
                      +++.+.|+ ++..   +.... +..+++.|  .+++.+.+.+.|+++||.+.++              |  |+|+.. .|
T Consensus       306 ~~l~~~l~-~~~g---~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt  381 (401)
T PRK10874        306 TLAEDALA-KLPG---FRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT  381 (401)
T ss_pred             HHHHHHHh-cCCC---EEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC
Confidence            99999888 7621   33332 33333332  2344455555556679998762              2  999774 38


Q ss_pred             cccHHHHHHHHHHHhhhc
Q 015283          392 LAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~~~  409 (410)
                      ++|++++++.|+++++.+
T Consensus       382 ~edid~ll~al~~~~~~~  399 (401)
T PRK10874        382 QSDVDALVNAVDRALELL  399 (401)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            899999999999987653

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.95  E-value=2.9e-27  Score=198.69  Aligned_cols=276  Identities=18%  Similarity=0.181  Sum_probs=210.0

Q ss_pred             cccCCceEEEecCChhhHHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh
Q 015283           97 VLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK  175 (410)
Q Consensus        97 ~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~  175 (410)
                      +.++++|++  -.|+.+.+++++++.  +.|| ++|+...|+|..|.-.+...++.++.+|+.  .+|++|.+.+.+.++
T Consensus        83 pLt~dnic~--GvGsDE~ID~iiR~~--c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~--pdF~lnvdai~evl~  156 (375)
T KOG0633|consen   83 PLTSDNICV--GVGSDELIDLIIRCV--CDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLN--PDFSLNVDAIAEVLE  156 (375)
T ss_pred             CCCccceEE--ecCcHHHHHHHHhhe--ecCCccceeecCCcceeEEEEeecCCceEEEecCC--CCccccHHHHHHHHh
Confidence            356899999  777888888864333  5599 999999999999988888889999999984  478999999988887


Q ss_pred             cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283          176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK  255 (410)
Q Consensus       176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  255 (410)
                      . ....++++.++|+||||..++.+++++|.+-=.  |.++++||+|-+|....      +-..+...+++.+++.++||
T Consensus       157 ~-ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~------S~~~lV~kYpNLivlqTlSK  227 (375)
T KOG0633|consen  157 L-DSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVE------SRMKLVKKYPNLIVLQTLSK  227 (375)
T ss_pred             c-cccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeecccc------ccchHhHhCCceeehhhhhh
Confidence            6 236778888999999999999999999864333  78999999999998421      22255678899999999999


Q ss_pred             cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      .||++|+|+||..+   +..+++.+....    .  ..+.+..+..+|..++++...     +.++..++.+.+.+.+|.
T Consensus       228 sfGLAGiRvG~~~~---~~~ia~iln~~K----a--PYNiS~~~s~~AL~Als~~n~-----kkme~~rdaiv~er~RL~  293 (375)
T KOG0633|consen  228 SFGLAGIRVGYGAF---PLSIAEILNRAK----A--PYNISVAGSVAALAALSDSNG-----KKMEDVRDAIVRERERLF  293 (375)
T ss_pred             hcCcceeEeecccc---cHHHHHHHHhcc----C--CccccchhHHHHHHhcCcccc-----hHHHHHHHHHHHHHHHHH
Confidence            99999999999766   777555544422    1  235566666778888886553     456888999999999999


Q ss_pred             HHhhhccCCCCCcccccCCcceeeecCC-------CHHHHHHhhhcCcEEEcCC-------C--eEEecCCCcccHHHHH
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLA  399 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~~i~~~~  399 (410)
                      +.|. ++....  ++..+..+.|+.+..       ......+++.+.||.|+--       |  ||+++  ++|+-.-++
T Consensus       294 keLt-~v~~~~--~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG--t~EentvL~  368 (375)
T KOG0633|consen  294 KELT-EVPFLN--DYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG--TPEENTVLM  368 (375)
T ss_pred             HHhh-cCcccc--CCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC--CcccchHHH
Confidence            9998 876422  345555566766533       2344555656689998643       2  99985  567778899


Q ss_pred             HHHHHHh
Q 015283          400 DAIIDSY  406 (410)
Q Consensus       400 ~~l~~~l  406 (410)
                      +.+++++
T Consensus       369 k~~K~~l  375 (375)
T KOG0633|consen  369 KCLKQFL  375 (375)
T ss_pred             HHHHhhC
Confidence            9888764

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.95  E-value=3e-26  Score=217.51  Aligned_cols=320  Identities=13%  Similarity=0.039  Sum_probs=208.2

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-CccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +..+|||+.|.|   .|.+. ++.+.+++.+++.. +. ...|..    .....++++++++++..       ++++++ 
T Consensus        15 g~~~id~~~~~~---~g~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~-   82 (360)
T TIGR00858        15 GRRLLNFSSNDY---LGLAS-HPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-------EAALLF-   82 (360)
T ss_pred             CceEEecccCCc---ccCCC-CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence            457899999864   24322 57888888777643 11 011211    22355688888888632       456766 


Q ss_pred             ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEE
Q 015283          107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILL  185 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii  185 (410)
                       ++| ++++..+  +...+.+||.|++++|+|..+...++..|.+++.++.       +|++.+++.+++.. +++++++
T Consensus        83 -~~G-~~~~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~  151 (360)
T TIGR00858        83 -SSG-YLANVGV--ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV  151 (360)
T ss_pred             -Cch-HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence             544 5555554  2334679999999999999999988888988877764       58889998887532 3467888


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh--hcCCcEEEEecccccccccCCC
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLGLYAER  263 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~~~~G~r  263 (410)
                      +++++||||...   ++++|.++|+++|+++|+||+|..+.++. ...  +.....  ...+++++++|+||.++++|  
T Consensus       152 ~~~~~~~~G~~~---~~~~i~~l~~~~~~~li~De~~~~~~~~~-~~~--~~~~~~~~~~~~~~i~i~s~sK~~~~~g--  223 (360)
T TIGR00858       152 TDGVFSMDGDIA---PLPQLVALAERYGAWLMVDDAHGTGVLGE-DGR--GTLEHFGLKPEPVDIQVGTLSKALGSYG--  223 (360)
T ss_pred             EeCCccCCCCCc---CHHHHHHHHHHcCcEEEEECcccccCcCC-CCC--chHHhcCCCccCCcEEEEechhhhhccC--
Confidence            899999999854   46778888999999999999987654431 111  111111  12357899999999998766  


Q ss_pred             cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          264 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       264 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                       ||+++   ++++.+.+........  ....++...+.++...++.       .+..++.+++++++++++.+.|+ +++
T Consensus       224 -G~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~l~~~L~-~~~  289 (360)
T TIGR00858       224 -AYVAG---SQALIDYLINRARTLI--FSTALPPAVAAAALAALEL-------IQEEPWRREKLLALIARLRAGLE-ALG  289 (360)
T ss_pred             -cEEEc---CHHHHHHHHHhCccce--ecCCCCHHHHHHHHHHHHH-------HhhCHHHHHHHHHHHHHHHHHHH-HcC
Confidence             89744   7775555433211110  1112333333333333321       11124667899999999999998 876


Q ss_pred             CCCCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHH
Q 015283          344 SGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAII  403 (410)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~  403 (410)
                          +... +..+.++|+.+.     .++.+++++ +||.+.++       +    |+++.. .+++++++++++|+
T Consensus       290 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       290 ----FTLM-PSCTPIVPVIIGDNASALALAEELQQ-QGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             ----CccC-CCCCCEEEEEeCCHHHHHHHHHHHHH-CCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence                3444 334567666442     234556654 69999641       2    999874 48899999998874

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.95  E-value=5.8e-26  Score=216.99  Aligned_cols=332  Identities=13%  Similarity=0.060  Sum_probs=208.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...|||..|...+..|+.  +|.+.+++.+++....  ...| +.....++.+.+++++    +    .+++++  ++||
T Consensus        27 ~~~id~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~~~~--~~sg   93 (379)
T TIGR00707        27 KEYLDFVAGIAVNSLGHA--HPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS----G----ADRVFF--CNSG   93 (379)
T ss_pred             CEEEEcCcchhhccCCCC--CHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCCc
Confidence            468999997543344543  5888888887765421  1234 3444566666676664    2    247888  8999


Q ss_pred             hhHHHHHHHHHHHhC-----CCCEEEEcCCCCcchhhhhhhCCCCccc----eeeecCCCcc--cChhhHHHHHhcCCCC
Q 015283          112 TGSLRLAAALIERYF-----PGAKVLISSPTWGNHKNIFNDARVPWSE----YRYYDPKTVG--LDFEGMIADIKAAPGG  180 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~--~d~~~l~~~i~~~~~~  180 (410)
                      ++++..+.+++..+.     +||+|++++|+|..+.......+.....    .++..+..+.  .|++.+++.+.+   +
T Consensus        94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~  170 (379)
T TIGR00707        94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD---E  170 (379)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh---C
Confidence            999999876654432     3799999999998876655544433211    2221111111  178899888865   5


Q ss_pred             cEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      +.++++++++||+|.. ++.+++++|.++|+++++++|+||+|.+++..+   ....... ....++++   +|||.++ 
T Consensus       171 ~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g---~~~~~~~-~~~~~d~~---t~sK~~~-  242 (379)
T TIGR00707       171 TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG---KFFAYEH-YGIEPDII---TLAKGLG-  242 (379)
T ss_pred             eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhhHHh-cCCCCCEE---EEccccc-
Confidence            6666666667777764 689999999999999999999999998876431   1111111 12223433   7899999 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      +|+|+||++.   ++++++.+    .........+.+..++.++...|+.-+        ....+++++++++.+.+.|.
T Consensus       243 ~G~riG~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~aa~aaL~~~~--------~~~~~~~~~~~~~~~~~~l~  307 (379)
T TIGR00707       243 GGVPIGATLA---KEEVAEAF----TPGDHGSTFGGNPLACAAALAVLEVIE--------KERLLENVKEKGDYFKERLE  307 (379)
T ss_pred             CCcccEEEEE---cHHHHhhh----cCCCCCCCCCCCHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHHHHH
Confidence            9999999854   67754443    322222222456666666665543110        02344556666666666665


Q ss_pred             hccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHh
Q 015283          340 AKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       340 ~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                       +++....+... +..|.|+|+.+  +...+.+.+.+.||.+.|++    ||+++. .+++++++++++|++++
T Consensus       308 -~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~  379 (379)
T TIGR00707       308 -ELGKNYPNKEV-RGKGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI  379 (379)
T ss_pred             -HHHhhCCCCcc-ccCceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence             54321112112 23466666644  33344444455799999865    998653 58999999999998864

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.95  E-value=5.4e-26  Score=218.44  Aligned_cols=334  Identities=13%  Similarity=0.027  Sum_probs=210.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|.+-...|+.  .|.+.+++.+.+....   +.......++++++++++....+    .+++++  ++||++
T Consensus        39 ~~~iD~~~g~~~~~lG~~--~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~--~~gg~e  107 (396)
T PRK02627         39 KEYLDFLAGIAVNNLGHC--HPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG----MDKVFF--CNSGAE  107 (396)
T ss_pred             CEEEECCccHHhccCCCC--CHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC----CCEEEE--CCCcHH
Confidence            467899888763344543  4788888887765421   11111234677777777765543    478999  999999


Q ss_pred             HHHHHHHHHHHhCC-----CCEEEEcCCCCcchhhhhhhCCCCc-c---ceeeecCCCc----ccChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFP-----GAKVLISSPTWGNHKNIFNDARVPW-S---EYRYYDPKTV----GLDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~-----gd~Vl~~~p~y~~~~~~~~~~g~~~-~---~v~~~~~~~~----~~d~~~l~~~i~~~~~~  180 (410)
                      |++.+.+++.....     .++|++..++|.++.......+... .   ..++.  .++    ..|++.+++.+.+   +
T Consensus       108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~---~  182 (396)
T PRK02627        108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITD---K  182 (396)
T ss_pred             HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCC---C
Confidence            99999776644332     1789999999987754443332211 1   11111  111    1288899988853   6


Q ss_pred             cEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      +.++++.+++|||| .+++.+.+++|.++|++||+++|+||+|.+|+..+   ..+.... .+..+++   .+|||.++ 
T Consensus       183 ~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g---~~~~~~~-~~~~pdi---~t~sK~~~-  254 (396)
T PRK02627        183 TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG---KLFAYQH-YGIEPDI---MTLAKGLG-  254 (396)
T ss_pred             eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC---ceeeehh-cCCCCCE---EEEcchhh-
Confidence            77777788899999 68899999999999999999999999999886432   1122111 1222233   37999999 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      +|+|+||++.   ++++++.+    .......+.+.+.+++.++...|+..+.        ++..++++++.+.+.+.|.
T Consensus       255 ~G~rig~~~~---~~~~~~~~----~~~~~~~t~~~~~~~~~aa~~~l~~~~~--------~~~~~~~~~~~~~~~~~l~  319 (396)
T PRK02627        255 GGVPIGAVLA---KEKVADVF----TPGDHGSTFGGNPLACAAALAVIEIIEE--------EGLLENAAEVGEYLRAKLR  319 (396)
T ss_pred             CCcccEEEEE---cHHHHhcc----CCCCCCCCCCCCHHHHHHHHHHHHHHhh--------ccHHHHHHHHHHHHHHHHH
Confidence            8999999855   66644443    2222222334566677777666542211        1223333444444444443


Q ss_pred             hccCCC-CCcccccCCcceeeecCC--C-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          340 AKDKSG-KDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       340 ~~~g~~-~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       ++... ..+... +..|.+.|+.+  + .+++.+++++ ||.+.|++    ||+++ ..+++++++++++|+++++++
T Consensus       320 -~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~l~~~-Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~  395 (396)
T PRK02627        320 -ELLEKYPGIKEV-RGLGLMIGIELDRPAAEIVKKALEK-GLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLKEL  395 (396)
T ss_pred             -HHHHhCCCeeee-ccCcEEEEEEecCcHHHHHHHHHHC-CeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence             32100 001222 23466777754  2 3456777765 99999865    88764 358999999999999998764

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.95  E-value=6e-26  Score=217.32  Aligned_cols=331  Identities=14%  Similarity=0.121  Sum_probs=216.9

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      +.+++||+.|.++   +++. +|.+.+++.+++.. . ....|....|..++++++++++....+.   ++.+++  ++|
T Consensus        32 g~~~id~~~~~~~---g~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~sG  102 (385)
T TIGR01825        32 GKEVINLSSNNYL---GFAD-HPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QSG  102 (385)
T ss_pred             CceEEEeeccCcc---CCCC-CHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--CcH
Confidence            4678999988642   4433 67888887777643 2 1245777889999999999998766553   345665  544


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEeCCC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCA  189 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p  189 (410)
                       ++++..+  +...+.+||.|++++|+|+.+...+...|.++..++       .+|++++++.+++.. +++++++++++
T Consensus       103 -~~a~~~a--~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v  172 (385)
T TIGR01825       103 -FNTNQGV--LSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGV  172 (385)
T ss_pred             -HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecC
Confidence             6666665  334477999999999999999877777777765543       267888888776532 36778888889


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      +||||.+.+   +++|.++|++||+++|+||+|..+.++.. ... ....+.-..+.++++.||||.++++|   ||++.
T Consensus       173 ~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~-~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~  244 (385)
T TIGR01825       173 FSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEA-GRG-TVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAG  244 (385)
T ss_pred             CcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCC-CCc-cHhhcCCCcCCcEEEEeccHHhhcCC---CEEec
Confidence            999999665   67788889999999999999976654311 110 11111112457899999999998665   89643


Q ss_pred             EeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          270 VCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                         ++++++.+.......   ... ..+...+.++...++..      .+ ..+..++++++++++.+.|+ ++|    +
T Consensus       245 ---~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~al~~~------~~-~~~~~~~~~~~~~~l~~~L~-~~g----~  306 (385)
T TIGR01825       245 ---HKELIEYLKNRARPF---LFSTAQPPAVVAALAAAVDEL------QR-SPELMERLWDNTRFFKAGLG-KLG----Y  306 (385)
T ss_pred             ---CHHHHHHHHHhCccc---cccCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH-HcC----C
Confidence               777666654321111   112 22333344443333211      00 12345667778899999998 776    3


Q ss_pred             ccccCCcceeeec-CC---CHHHHHHhhhcCcEEEcCC-------C----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          349 SFILRQIGMFSFT-GL---NKAQSDNMTNKWHVYMTKD-------G----RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       349 ~~~~~~~~~~~~~-~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++..+.+.++.+. +.   ..++...++++ ||.+.+.       |    |++++ ..+++++++++++|+++++++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~  382 (385)
T TIGR01825       307 DTGGSETPITPVVIGDEKAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL  382 (385)
T ss_pred             CCCCCCCCEEEEEECCHHHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence            4444544433222 21   23456777775 9988431       2    77654 359999999999999998764

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.95  E-value=9.3e-26  Score=210.69  Aligned_cols=292  Identities=15%  Similarity=0.111  Sum_probs=197.3

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI  133 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~  133 (410)
                      .|.++++..+.+...  .  ++..-+.++++.+++++..      +++++++  ++||++++..+  +...+.+||.|++
T Consensus        35 ~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~g~------~~e~ilv--~~gg~~a~~~~--~~al~~~gd~Vli  100 (346)
T TIGR03576        35 GFKIDEEDLELLETY--V--GPAIFEEKVQELGREHLGG------PEEKILV--FNRTSSAILAT--ILALEPPGRKVVH  100 (346)
T ss_pred             ChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHcCC------CcceEEE--ECCHHHHHHHH--HHHhCCCCCEEEE
Confidence            477777766655331  1  1223456777777777532      2688988  99999999998  4445779999997


Q ss_pred             c---CCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 015283          134 S---SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ  210 (410)
Q Consensus       134 ~---~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~  210 (410)
                      +   .|+|..|...++..|+++..+         .+++.++. .    +++.++++ ++.+++|.+++.+++++|+++|+
T Consensus       101 ~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~----~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~  165 (346)
T TIGR03576       101 YLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I----DGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAK  165 (346)
T ss_pred             CCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C----cCceEEEE-ECCCCCCcccCHHHHHHHHHHHH
Confidence            5   478888888888888765322         13444322 1    23455554 35699999999999999999999


Q ss_pred             HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283          211 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP  290 (410)
Q Consensus       211 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~  290 (410)
                      ++|+++|+||+|..+..+..+..  ..   ... ...+++.|+||  +++|+|+||+++   ++++++.+.....    .
T Consensus       166 ~~~~~livDEAy~~~~~~~~~~~--~~---~~~-~~divv~s~SK--alaG~r~G~v~~---~~~li~~l~~~~~----~  230 (346)
T TIGR03576       166 SKEAIVLVDDASGARVRRLYGQP--PA---LDL-GADLVVTSTDK--LMDGPRGGLLAG---RKELVDKIKSVGE----Q  230 (346)
T ss_pred             HcCCEEEEECCccccccccCCCC--CH---HHc-CCcEEEeccch--hccccceEEEEe---CHHHHHHHHHhhc----C
Confidence            99999999999987653211111  11   111 23467889999  568999999755   7786666554433    2


Q ss_pred             cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----HH
Q 015283          291 MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KA  366 (410)
Q Consensus       291 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~  366 (410)
                      ...+.+...+.++...|+...        .+..++.++++++++.+.+. .++      +.++..+ |+|+.+.    .+
T Consensus       231 ~~~s~~~~~~~aa~~aL~~~~--------~~~~~~~l~~r~~~~~~~l~-~~~------~~~~~~~-f~~~~~~~~~~~~  294 (346)
T TIGR03576       231 FGLEAQAPLLAAVVRALEEFE--------LSRIRDAFKRKEEVYLRLFD-KLN------VERTPTG-FVIKGVEEEKLIE  294 (346)
T ss_pred             cccCccHHHHHHHHHHHhhcc--------HHHHHHHHHHHHHHHHHHHH-hCC------CCcCCCe-EEEEeCCCCCHHH
Confidence            222345556666666665421        13557788888887777776 443      2333434 7888663    36


Q ss_pred             HHHHhhhcCcEEEcCC-------C--eEEecCCCcc---cHHHHHHHHHHHh
Q 015283          367 QSDNMTNKWHVYMTKD-------G--RISLAGLSLA---KCEYLADAIIDSY  406 (410)
Q Consensus       367 ~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~---~i~~~~~~l~~~l  406 (410)
                      ++.++++++||.++|+       +  |||++. +++   +++.+++.|++.+
T Consensus       295 ~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~-~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       295 IGLDLLRNYGIITITAVGMPGASKTLRFDLAA-KDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             HHHHHHHhCCEEEeCCcccCCCCCeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence            7888998899999984       2  999986 444   7999999998865

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PLN02721 threonine aldolase

Probab=99.95  E-value=1.6e-25  Score=212.01  Aligned_cols=324  Identities=14%  Similarity=0.093  Sum_probs=203.3

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .+++|+.|.+    ..  +++.+.+++.+.........|  .....++++++++++...        .+++  +.+|+++
T Consensus         6 ~~~~~~~~~~----~~--~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~--------~~~~--~~~Gs~a   67 (353)
T PLN02721          6 RVVDLRSDTV----TK--PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFGKE--------AALF--VPSGTMG   67 (353)
T ss_pred             hhhhhhcccc----cC--CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhCCc--------eeEE--ecCccHH
Confidence            4688998887    22  368888888764111111333  333789999999997432        3455  6777877


Q ss_pred             HHHHHHHHHHhC-CCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEe
Q 015283          115 LRLAAALIERYF-PGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLH  186 (410)
Q Consensus       115 ~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~  186 (410)
                      +..+  +...+. +||+|++++|+|.....   .+...|.+++.++.  .+++.+|++.+++.+++.    .++++++++
T Consensus        68 ~~~~--l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l  143 (353)
T PLN02721         68 NLIS--VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKN--NEDGTMDLDAIEAAIRPKGDDHFPTTRLICL  143 (353)
T ss_pred             HHHH--HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCC--CcCCCcCHHHHHHHHHhccCCCCCcceEEEE
Confidence            6654  333455 99999999999864443   56678999988886  345678999999999742    024556665


Q ss_pred             CC-CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283          187 GC-AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       187 ~~-p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      ++ ++||||.+++.+++++|.++|+++|+++|+|++|........+.+..   .....  ...++.|+||.++.   ++|
T Consensus       144 ~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~---~~~~~--~d~~~~s~sK~l~~---~~G  215 (353)
T PLN02721        144 ENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVH---RLVKA--ADSVSVCLSKGLGA---PVG  215 (353)
T ss_pred             eccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHH---HHhhh--CCEEEEecccccCC---cee
Confidence            44 68999999999999999999999999999999975322100011111   11212  23445589999873   357


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |+  +..++++++.+......    ....+...+..++..+.   .+    ++..++. ++..++++.+.+.|+ +++. 
T Consensus       216 ~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~l----~~~~~~~-~~~~~~~~~l~~~L~-~~~~-  279 (353)
T PLN02721        216 SV--IVGSKSFIRKAKRLRKT----LGGGMRQVGVLAAAALV---AL----QENVPKL-EDDHKKAKLLAEGLN-QIKG-  279 (353)
T ss_pred             eE--EecCHHHHHhHHHHHHh----cCCCeehhHHHHHHHHH---HH----HHHHHHH-HHHHHHHHHHHHHHH-hCCC-
Confidence            64  33477766665442221    11111112212111111   11    1222232 333566778888888 7631 


Q ss_pred             CCcc--cccCCcceeeecCC------CHH-HHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283          346 KDWS--FILRQIGMFSFTGL------NKA-QSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       346 ~~~~--~~~~~~~~~~~~~~------~~~-~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~  408 (410)
                        +.  ...++ +.|+|+.+      +.+ +.++|. ++||.+.|++    |+++. ..+++++++++++|++++..
T Consensus       280 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~  352 (353)
T PLN02721        280 --LRVNVAAVE-TNIVYFDITDGSRITAEKLCKSLE-EHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALT  352 (353)
T ss_pred             --cEEecCCcc-ceEEEEEccCCccccHHHHHHHHH-hCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence              22  33344 44566533      233 455554 6799999986    99976 45899999999999998765

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.95  E-value=1.2e-25  Score=213.29  Aligned_cols=315  Identities=12%  Similarity=-0.000  Sum_probs=201.1

Q ss_pred             cHHHHHHHHHhhccCCCccCc-C------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283           54 LDVVKKAENLMLERGENKEYL-P------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~-~------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      .+.+.+++.+........++. .      ..-..++++.+++++..        +.+.+  ++||++++..++  ...+.
T Consensus        21 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~--------~~~~i--~~g~~~a~~~~~--~~l~~   88 (370)
T TIGR02539        21 TEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGM--------DEARV--THGAREGKFAVM--HALCK   88 (370)
T ss_pred             cHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCC--------CceEE--ECChHHHHHHHH--HHhhC
Confidence            577888877764321111111 0      11356788888888532        34555  799999998873  34467


Q ss_pred             CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEeCCCCCCCCCCCCHHHH
Q 015283          127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPEQW  202 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~~~p~NPtG~~~~~~~l  202 (410)
                      +||.|+++.+.|.+....++..|++++.++..++.++.+|++++++.+++.    .+++.++++++|+||||...   ++
T Consensus        89 ~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~---~l  165 (370)
T TIGR02539        89 EGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP---DA  165 (370)
T ss_pred             CCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc---CH
Confidence            999999988886555567788999999999754456889999999988641    12466777899999999954   56


Q ss_pred             HHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH
Q 015283          203 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       203 ~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                      ++|+++|+++|+++|+|++|.....+   .+.      . ..+.+++++|+||.++ +|.|+||+++   ++++++.+..
T Consensus       166 ~~i~~la~~~~~~livDea~~~g~~~---~~~------~-~~~~di~v~s~sK~~~-~~g~~G~l~~---~~~~i~~l~~  231 (370)
T TIGR02539       166 GKVAKVCREKGVPLLLNCAYTVGRMP---VSA------K-EIGADFIVGSGHKSMA-ASGPCGVLGM---SEEWEDIVLR  231 (370)
T ss_pred             HHHHHHHHHcCCeEEEECccccCCcC---CCH------H-HcCCCEEEeeCccccc-CCCCEEEEEE---CHHHHhhhcc
Confidence            67777899999999999998764321   111      1 1134577799999998 5678999865   7786666554


Q ss_pred             HHHhhccCc---c-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc--ccCCcc
Q 015283          283 QLKRLARPM---Y-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF--ILRQIG  356 (410)
Q Consensus       283 ~~~~~~~~~---~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--~~~~~~  356 (410)
                      .......+.   + ..+...++.++...+.+      +.+.+++.++.++. ++++.+.|+ ++|+    ..  ..+..+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~l~~~~~~~~~-~~~l~~~L~-~~g~----~~~~~~~s~t  299 (370)
T TIGR02539       232 KSRYSPVKEVELLGCTSRGAPIVTMMASFPH------VVERVKRWDEEVKK-TRWFVAELE-DIGF----IQLGQKPKEH  299 (370)
T ss_pred             cccCCccceeeeecccccccHHHHHHHHHHH------HHHHHHHHHHHHHH-HHHHHHHHH-hCCc----EEEccCCCcC
Confidence            322111100   0 11111222233333321      12233344444444 457999998 8873    32  223445


Q ss_pred             eeeecCCC------------HHHHHHhhhcCcEE-EcCCC----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          357 MFSFTGLN------------KAQSDNMTNKWHVY-MTKDG----RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       357 ~~~~~~~~------------~~~~~~ll~~~gi~-v~~~g----Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .|+++...            ...+.+.|.++||. +.++.    |+++.+.++++++++++.|+++++++
T Consensus       300 ~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~  369 (370)
T TIGR02539       300 DLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY  369 (370)
T ss_pred             ceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence            56655321            11344444456997 77753    88864459999999999999998764

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.94  E-value=4.7e-25  Score=207.48  Aligned_cols=310  Identities=15%  Similarity=0.008  Sum_probs=205.7

Q ss_pred             ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEE
Q 015283           53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL  132 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl  132 (410)
                      +++.+++++.+.....  ..|.+.....++++.+++++.        ++++++  +.||++++..+.  ...+.+||.|+
T Consensus        10 ~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~g--------~~~~~~--~~~gt~a~~~~~--~~l~~~gd~v~   75 (338)
T cd06502          10 PTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELFG--------KEAALF--VPSGTAANQLAL--AAHTQPGGSVI   75 (338)
T ss_pred             CCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHhC--------CCeEEE--ecCchHHHHHHH--HHhcCCCCeEE
Confidence            3789999988765331  357667778899999999864        245666  788999888773  33467999999


Q ss_pred             EcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283          133 ISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQWEKI  205 (410)
Q Consensus       133 ~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~----~~~~~ii~~~p~NPtG~~~~~~~l~~i  205 (410)
                      ++.|+|..+..   .....|++++.++.  + .+.+|++++++++.+..    ++++++++++|+|| |.+++.+++++|
T Consensus        76 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i  151 (338)
T cd06502          76 CHETAHIYTDEAGAPEFLSGVKLLPVPG--E-NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAI  151 (338)
T ss_pred             EecCcceeeecCCcHHHHcCceEEeecC--C-CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHH
Confidence            99999876543   23457888888876  2 26789999999987421    25677888999997 667799999999


Q ss_pred             HHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          206 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       206 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      +++|+++|+++|+||+|..+.......   .+.... . ...+++.|+||.++++|   |++  +..++++++++.....
T Consensus       152 ~~~~~~~~~~livDea~~~~~~~~~~~---~~~~~~-~-~~d~~~~s~sK~~~~~~---g~~--~~~~~~~~~~~~~~~~  221 (338)
T cd06502         152 SALAKENGLPLHLDGARLANAAAALGV---ALKTYK-S-GVDSVSFCLSKGGGAPV---GAV--VVGNRDFIARARRRRK  221 (338)
T ss_pred             HHHHHHcCCeEeechHHHHHHHHhcCC---CHHHHH-h-cCCEEEEeccccCCCcc---ceE--EECCHHHHHHHHHHHH
Confidence            999999999999999975432110111   111111 1 22356889999999886   553  3447777676654332


Q ss_pred             hhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceee-ecCCC
Q 015283          286 RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS-FTGLN  364 (410)
Q Consensus       286 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~  364 (410)
                      ...  ...+.+...+.++...|++..+        .+..+++.++++++.+.|+ ++|.    ...++.++++. +..-.
T Consensus       222 ~~~--~~~~~~~~~~~a~~~~L~~~~~--------~~~~~~~~~~~~~l~~~L~-~~~~----~~~~~~~~~~~v~~~~~  286 (338)
T cd06502         222 QAG--GGMRQSGFLAAAGLAALENDLW--------LRRLRHDHEMARRLAEALE-ELGG----LESEVQTNIVLLDPVEA  286 (338)
T ss_pred             HhC--CChhhHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHHHHHHH-hcCC----CcccccCCeEEEecCCc
Confidence            111  1112344555556666665422        2445677777889999998 8773    34445544432 22212


Q ss_pred             HHHHHHhhh------cCcEEEcCCC----eEEecCC-CcccHHHHHHHHHHH
Q 015283          365 KAQSDNMTN------KWHVYMTKDG----RISLAGL-SLAKCEYLADAIIDS  405 (410)
Q Consensus       365 ~~~~~~ll~------~~gi~v~~~g----Ris~~~~-~~~~i~~~~~~l~~~  405 (410)
                      .....++.+      ++|+.+.+.+    ||+.... +++++++++++++++
T Consensus       287 ~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~  338 (338)
T cd06502         287 NAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKAV  338 (338)
T ss_pred             cHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhcC
Confidence            222333332      3699887653    9987643 889999999998753

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.94  E-value=2.2e-25  Score=213.28  Aligned_cols=337  Identities=12%  Similarity=0.045  Sum_probs=207.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++.... ...........++.+.+++.    .+    .+++.+  +++|+
T Consensus        31 ~~~lD~~~g~~~~~lGh~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~----~~----~~~v~~--~~sGs   98 (389)
T PRK01278         31 ERYLDFASGIAVNSLGHA--HPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVEN----SF----ADKVFF--TNSGA   98 (389)
T ss_pred             CEEEECCccHhhccCCCC--CHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhh----CC----CCEEEE--cCCcH
Confidence            468899887543345663  6899998888875421 11111122233455555444    21    368888  99999


Q ss_pred             hHHHHHHHHHHHh--CCCC----EEEEcCCCCcchhhhhhhCCCCccceeee-c-CCCcc----cChhhHHHHHhcCCCC
Q 015283          113 GSLRLAAALIERY--FPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYY-D-PKTVG----LDFEGMIADIKAAPGG  180 (410)
Q Consensus       113 ~a~~~~~~~~~~~--~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~----~d~~~l~~~i~~~~~~  180 (410)
                      +|++.+.++.+.+  .+||    +|++.+++|.++.......+......+.. + ..++.    .|++.+++.+.+   +
T Consensus        99 eA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~  175 (389)
T PRK01278         99 EAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP---N  175 (389)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC---C
Confidence            9999997777654  3676    99999999998876555443332221100 0 11111    588999988864   6


Q ss_pred             cEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      ++++++.+++||+| .+++.+.+++|.++|++||+++|+||+|.+++..+   ..+..... ...++   +.|+||.++ 
T Consensus       176 ~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~~-~~~pd---i~t~sK~l~-  247 (389)
T PRK01278        176 TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG---KLFAHEWA-GVTPD---IMAVAKGIG-  247 (389)
T ss_pred             eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---cceeeccc-CCCCC---EEEEehhcc-
Confidence            77777777888998 78899999999999999999999999999886432   11111111 11123   348999998 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      +|+|+||+++   ++++.+.+    .......+.+.+.+++.++...|+.-+ ...+.++.++..++++++.+.+.+   
T Consensus       248 ~G~~ig~~~~---~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~l~~l~~---  316 (389)
T PRK01278        248 GGFPLGACLA---TEEAAKGM----TPGTHGSTYGGNPLAMAVGNAVLDVIL-APGFLDNVQRMGLYLKQKLEGLVD---  316 (389)
T ss_pred             CCcceEEEEE---cHHHHhcc----CCCCCCCCCCccHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHh---
Confidence            8999999855   66644443    322222333455666666644443110 001122333344444433333222   


Q ss_pred             hccCCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          340 AKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       340 ~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                       +.+  ..+....+ .|.+.++.+   ..++..+++++ ||.+.|++    ||+++. .+++++++++++|++++.++
T Consensus       317 -~~~--~~~~~v~g-~G~~~~i~~~~~~~~~~~~l~~~-GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~  389 (389)
T PRK01278        317 -RFP--DVIEEVRG-KGLLLGLKCVVPNRDLVQALRDE-GLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAESL  389 (389)
T ss_pred             -hCC--CceeeEec-ccEEEEEEEecCHHHHHHHHHHC-CeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence             121  00122233 455655433   24556777775 99999875    888643 58999999999999998753

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.94  E-value=2.5e-25  Score=214.14  Aligned_cols=326  Identities=13%  Similarity=0.074  Sum_probs=213.6

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCC----CccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGE----NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .|+|..+..++++.+.+++.+......    ...|.    -..-.+++|+++++++...     ++++|++  |+|+|++
T Consensus        25 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~--t~g~t~~   97 (406)
T PRK09295         25 AYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINAR-----SAEELVF--VRGTTEG   97 (406)
T ss_pred             EEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcC-----CCCeEEE--eCCHHHH
Confidence            455666777778999999877764211    01111    0123568899999987542     2678999  9999999


Q ss_pred             HHHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283          115 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC  188 (410)
Q Consensus       115 ~~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~  188 (410)
                      +..++..+.  .+.+||+|+++++.|++    +...++..|++++.++..  .++.+|++++++.+++   +++++++++
T Consensus        98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~---~t~lv~l~~  172 (406)
T PRK09295         98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPALFDE---RTRLLAITH  172 (406)
T ss_pred             HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCCCHHHHHHhcCC---CcEEEEEec
Confidence            998754331  35699999999988764    445556789999999873  4566899999998865   678888899


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      |+||||.+.+   +++|+++|+++|+++++|++|...... .     .+    ...+.++++.|++|.+|++|  +||++
T Consensus       173 ~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~-~-----~~----~~~~~D~~~~s~~K~~gp~G--~G~l~  237 (406)
T PRK09295        173 VSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHHP-V-----DV----QALDCDFYVFSGHKLYGPTG--IGILY  237 (406)
T ss_pred             chhcccccCC---HHHHHHHHHHcCCEEEEEcccccCccc-c-----Cc----hhcCCCEEEeehhhccCCCC--cEEEE
Confidence            9999999776   566777799999999999997543311 1     11    12235688899999988776  68986


Q ss_pred             EEeCCchhHHHHHHHHHhh------------------ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVKSQLKRL------------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +   +++..+.+.......                  .+...++++..+..++...++.-   .  ...+++++++.++.
T Consensus       238 ~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~---~--~~g~~~i~~~~~~l  309 (406)
T PRK09295        238 V---KEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYV---S--ALGLNNIAEYEQNL  309 (406)
T ss_pred             E---chHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHH---H--HhCHHHHHHHHHHH
Confidence            5   666544432111000                  00011123333333333222210   0  11245777888888


Q ss_pred             HHHHHHHhhhccCCCCCcccccC--Ccceeee--cCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecCC
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILR--QIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAGL  390 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~--~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~~  390 (410)
                      ++++.+.|. +++.   +++..+  ..+++.|  .+.+.+.+.+.++++||.++.|              +  |+|+...
T Consensus       310 ~~~l~~~l~-~~~~---~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~y  385 (406)
T PRK09295        310 MHYALSQLE-SVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY  385 (406)
T ss_pred             HHHHHHHHh-cCCC---EEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCC
Confidence            999999887 6631   333332  2344433  2345555555667789999654              2  9987643


Q ss_pred             -CcccHHHHHHHHHHHhh
Q 015283          391 -SLAKCEYLADAIIDSYH  407 (410)
Q Consensus       391 -~~~~i~~~~~~l~~~l~  407 (410)
                       |++|++.+++.|+++..
T Consensus       386 nt~~did~l~~~l~~i~~  403 (406)
T PRK09295        386 NTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence             88999999999998754

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.94  E-value=4.4e-25  Score=212.68  Aligned_cols=329  Identities=15%  Similarity=0.097  Sum_probs=209.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .+.+++..++|+   +..+ +|.+++++.+.+... .     ...|+......+|++.+++++..       ++.+++  
T Consensus        46 ~~~~~~~sn~yl---~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-------~~~i~~--  112 (410)
T PRK13392         46 RRVTIWCSNDYL---GMGQ-HPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-------ESALLF--  112 (410)
T ss_pred             ceEEEEECCCcc---CCCC-CHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-------CCEEEE--
Confidence            457888887764   3222 578888887766431 1     01232233467899999999642       455666  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-CCCcEEEEe
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLH  186 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~~ii~  186 (410)
                       ++|++++..+...+....+||.|+++.+.|..+...++..|.++..++.   +    |.+.+++.+... .++++++++
T Consensus       113 -~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i  184 (410)
T PRK13392        113 -TSGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAF  184 (410)
T ss_pred             -CcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEE
Confidence             5567777666443322348898888777887777777778887765543   1    455666666532 246788888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC-cEEEEecccccccccCCCcc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~sK~~~~~G~r~G  265 (410)
                      ++|+||||.+.+   +++|.++|+++|+++|+||+|....+++.. .  ++.......+ .+++++|+||.||.+|   |
T Consensus       185 ~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g-~--g~~~~~~~~~~~div~~tlsK~~g~~G---G  255 (410)
T PRK13392        185 ESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARG-G--GIAERDGLMDRIDMIQGTLAKAFGCLG---G  255 (410)
T ss_pred             eCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCC-C--chhhhccCCCCCcEEEEEChHhhhccc---c
Confidence            999999999876   667777799999999999998833322111 1  1111111112 2488899999999887   8


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |+++   ++++++.+........  .....+...+.++...|+..+       .....+++++++++++.+.|+ ++|  
T Consensus       256 ~~~~---~~~~~~~l~~~~~~~~--~s~~~~~~~~~a~~aaL~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g--  320 (410)
T PRK13392        256 YIAA---SADLIDFVRSFAPGFI--FTTALPPAVAAGATAAIRHLK-------TSQTERDAHQDRVAALKAKLN-ANG--  320 (410)
T ss_pred             hhhc---CHHHHHHHHHhCcchh--ccCcCCHHHHHHHHHHHHHHh-------cCHHHHHHHHHHHHHHHHHHH-HcC--
Confidence            8643   7776665443221111  112233344555544444211       113455778888999999998 877  


Q ss_pred             CCcccccCCccee-eecCCC---HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          346 KDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~~~~~~~~~~~-~~~~~~---~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                        +.+.++.++++ ++++..   .++.++|++++||.+.+.       |    ||++.. .++++++++++.|+++++++
T Consensus       321 --~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~  398 (410)
T PRK13392        321 --IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL  398 (410)
T ss_pred             --CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence              35555555554 444532   244566776679998752       2    888753 38999999999999987653

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.94  E-value=3.5e-25  Score=212.12  Aligned_cols=326  Identities=13%  Similarity=0.085  Sum_probs=208.2

Q ss_pred             CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-CccCcCCcc----cHHHHHHHHHHhcCCCCCcccCCceEE
Q 015283           32 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVAT  105 (410)
Q Consensus        32 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~y~~~~g----~~~lr~aia~~~~~~~~~~~~~~~i~~  105 (410)
                      .+.+.|||+.|.+   .|+. .+|.+.+++.+.+.. .. ...|....|    ..++++.+++++.    .   ++.+++
T Consensus        37 ~g~~~id~~~~~~---~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~----~---~~~i~~  105 (385)
T PRK05958         37 DGRRMLNFASNDY---LGLA-RHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG----A---ERALLF  105 (385)
T ss_pred             CCceEEEeeCCCc---ccCC-CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----C---CcEEEE
Confidence            3467899998864   2332 257888888777643 10 122222223    4566666666642    1   344544


Q ss_pred             EecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283          106 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL  185 (410)
Q Consensus       106 ~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii  185 (410)
                         ++|++++..+  +...+.+||.|++++|+|+.+...+...|++++.++.       .|++.+++.++..++.+.+++
T Consensus       106 ---~~g~~~~~~~--l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi  173 (385)
T PRK05958        106 ---SSGYAANLAV--LTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIV  173 (385)
T ss_pred             ---CcHHHHHHHH--HHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEE
Confidence               5677766654  2334679999999999999999888888988887765       378899888875333467777


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      +++++||||..   .++++|+++|++||+++|+||+|..+.++........ .......++++++.|+||.++++|   |
T Consensus       174 ~~~~~~~~G~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G---g  246 (385)
T PRK05958        174 TESVFSMDGDL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAA-EAGLAGEPDVILVGTLGKALGSSG---A  246 (385)
T ss_pred             EEecccCCCCc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHH-hhCCCCCCceEEEEechhhcccCC---c
Confidence            78899999984   4577888889999999999999865433211111111 011223458899999999998766   8


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |++.   ++++.+.+.......  .....++...+.++...|+..      .+ ..+.++++.++++++.+.|+ +.+  
T Consensus       247 ~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~aal~~~------~~-~~~~~~~~~~~~~~l~~~L~-~~~--  311 (385)
T PRK05958        247 AVLG---SETLIDYLINRARPF--IFTTALPPAQAAAARAALRIL------RR-EPERRERLAALIARLRAGLR-ALG--  311 (385)
T ss_pred             EEEc---CHHHHHHHHHhCccc--eecCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH-HcC--
Confidence            8643   667555543221111  111123333333333333311      01 13567788889999999998 776  


Q ss_pred             CCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHh
Q 015283          346 KDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                        +++..+.++ |+++.+.     .++.+++.+ +||.+.++       |    ||+++. .+++++++++++|++++
T Consensus       312 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~  385 (385)
T PRK05958        312 --FQLMDSQSA-IQPLIVGDNERALALAAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL  385 (385)
T ss_pred             --CCcCCCCCC-EEEEEeCCHHHHHHHHHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence              344555544 4444331     234566654 69999752       2    999863 48999999999998864

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.94  E-value=5e-25  Score=211.64  Aligned_cols=327  Identities=14%  Similarity=0.051  Sum_probs=211.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+.+...  ....|.+. ...++.+.+++++...     .++++++  ++||
T Consensus        43 ~~~lD~~s~~~~~~lG~~--~p~v~~ai~~~~~~~~~~~~~~~~~-~~~~la~~l~~~~~~~-----~~~~v~~--~~sg  112 (398)
T PRK03244         43 KEYLDLLGGIAVNALGHA--HPAVVEAVTRQLATLGHVSNLFATE-PQIALAERLVELLGAP-----EGGRVFF--CNSG  112 (398)
T ss_pred             CEEEECCcCHhhccCCCC--CHHHHHHHHHHHHhccCccCccCCH-HHHHHHHHHHHhCCCC-----CCCEEEE--eCch
Confidence            567899887653344542  588888888777541  12346433 2346777777664211     2468999  9999


Q ss_pred             hhHHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCCcccChhhHHHHHhcC
Q 015283          112 TGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKTVGLDFEGMIADIKAA  177 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~  177 (410)
                      ++++..+.++...  +| +.|+..+++|..+..... ..|.            ++..+|.       .|++.+++.+.+ 
T Consensus       113 sea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-  182 (398)
T PRK03244        113 AEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD-  182 (398)
T ss_pred             HHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcC-
Confidence            9999999776644  44 678888888877643222 1221            1222222       378888888753 


Q ss_pred             CCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283          178 PGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN  256 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  256 (410)
                        ++.++++++++||||.+++.++ +++|.++|++||+++|+||+|.+|+..   ...+.... ....+++   .+|||.
T Consensus       183 --~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~---g~~~~~~~-~~~~pDi---~t~sK~  253 (398)
T PRK03244        183 --DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRT---GAWFAHQH-DGVTPDV---VTLAKG  253 (398)
T ss_pred             --CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccc---chHHhhhh-hCCCCCE---EEEchh
Confidence              6677777888999999998776 999999999999999999999887643   12222111 1222343   388999


Q ss_pred             ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          257 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       257 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      ++ +|+|+||+++   ++++.+.+    .......+.+.+.+++.++...|+.-.        .++..++++++++++.+
T Consensus       254 l~-~G~~ig~~~~---~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~l~~~~--------~~~~~~~~~~~~~~l~~  317 (398)
T PRK03244        254 LG-GGLPIGACLA---FGPAADLL----TPGLHGSTFGGNPVACAAALAVLDTIA--------SEGLLENAERLGEQLRA  317 (398)
T ss_pred             hh-CCcccEEEEE---cHHHHhhc----cCCCCcCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHH
Confidence            99 8999999855   66654443    222222223455566666655543110        02345667777888888


Q ss_pred             HhhhccCCCCCcccccCCcceeeecCCC----HHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          337 SLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      .|+ +++.+  .....+..|.+.|+.+.    ..+..++++ +||.+.+.+    |++++. .+++++++++++|++++.
T Consensus       318 ~L~-~~~~~--~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~  393 (398)
T PRK03244        318 GIE-ALGHP--LVDHVRGRGLLLGIVLTAPVAKAVEAAARE-AGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD  393 (398)
T ss_pred             HHH-hcCCC--ceeeEeeccEEEEEEEeccHHHHHHHHHHH-CCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence            888 76521  11112235677777552    234555655 699998754    888665 589999999999999987


Q ss_pred             hc
Q 015283          408 NV  409 (410)
Q Consensus       408 ~~  409 (410)
                      +.
T Consensus       394 ~~  395 (398)
T PRK03244        394 AA  395 (398)
T ss_pred             hc
Confidence            64

>PRK02948 cysteine desulfurase; Provisional

Probab=99.94  E-value=1.8e-25  Score=213.66  Aligned_cols=322  Identities=13%  Similarity=0.046  Sum_probs=209.0

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCC---CccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGE---NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR  116 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~  116 (410)
                      |+|..+.+++++.+.+++.+.+....   ...|.    ...-.+++|+.+++++...      +++|++  ++|+++++.
T Consensus         3 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~i~~--~~g~t~a~~   74 (381)
T PRK02948          3 YLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGE------EQGIYF--TSGGTESNY   74 (381)
T ss_pred             eccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCcHHHHHH
Confidence            56777777778999999887764211   01110    0122467788888886432      678999  999999998


Q ss_pred             HHHHHHHH--hCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          117 LAAALIER--YFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       117 ~~~~~~~~--~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      .+...+..  ..+||.|+++...|+.+..   .++..|.+++.+++.  +++.+|++++++.+++   ++.++++++|+|
T Consensus        75 ~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~---~~~lv~~~~~~n  149 (381)
T PRK02948         75 LAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAITP---DTVLASIQHANS  149 (381)
T ss_pred             HHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcCC---CCEEEEEECCcC
Confidence            87433321  1478999999977765544   456779999999873  4567899999998864   677888899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+.+   +++|.++|+++|+++++|++ +.++..+.+         ....+.++++.|++|.+|++|  +|++++  
T Consensus       150 ~tG~~~~---~~~I~~l~~~~~~~vivD~~-~~~g~~~~~---------~~~~~~d~~~~s~~K~~gp~G--~G~l~~--  212 (381)
T PRK02948        150 EIGTIQP---IAEIGALLKKYNVLFHSDCV-QTFGKLPID---------VFEMGIDSLSVSAHKIYGPKG--VGAVYI--  212 (381)
T ss_pred             CcEeehh---HHHHHHHHHHcCCEEEEECh-hhccccccC---------cccCCCCEEEecHHhcCCCCc--EEEEEE--
Confidence            9999766   55777789999999999976 555532111         112346788999999999888  588754  


Q ss_pred             CCchh-HHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          272 SSSDL-AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       272 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                       +++. ...+.............+++..++.++...++..      .+.+++.+++++++++++.+.|+ +++.    ++
T Consensus       213 -~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~----~v  280 (381)
T PRK02948        213 -NPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI------LKNMQEESLRFKELRSYFLEQIQ-TLPL----PI  280 (381)
T ss_pred             -cCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHh-cCCC----CE
Confidence             4442 1111000000000112244555555554444321      23356778999999999999998 8873    22


Q ss_pred             ccCCccee--------eecCCCHHH-HHHhhhcCcEEEcC-------------------------CC--eEEecC-CCcc
Q 015283          351 ILRQIGMF--------SFTGLNKAQ-SDNMTNKWHVYMTK-------------------------DG--RISLAG-LSLA  393 (410)
Q Consensus       351 ~~~~~~~~--------~~~~~~~~~-~~~ll~~~gi~v~~-------------------------~g--Ris~~~-~~~~  393 (410)
                      .......+        ...+++.+. ..++ +++||.+.+                         .+  |||+.. .|++
T Consensus       281 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~  359 (381)
T PRK02948        281 EVEGHSTSCLPHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKD  359 (381)
T ss_pred             EEeCCCccCcCCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHH
Confidence            21111111        112334443 4454 567999973                         12  999774 3899


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      |++++++.|+++++.
T Consensus       360 di~~l~~~l~~~~~~  374 (381)
T PRK02948        360 QIDTTIHALETIGNQ  374 (381)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998764

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.94  E-value=4.4e-25  Score=212.50  Aligned_cols=329  Identities=15%  Similarity=0.161  Sum_probs=211.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .+.++|..|..       ++++.+++++.+.+..      .....|.+..+.+.+++.+++++.+.++..  ...|.+  
T Consensus        19 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~--   87 (402)
T cd00378          19 RETLELIASEN-------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQP--   87 (402)
T ss_pred             HhCeeeeccCC-------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeec--
Confidence            45788876653       3479999998765421      112445566677777776655544444432  234444  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-----hhhCCCCccceeeecC-CCcccChhhHHHHHhcCCCCc
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-----FNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGS  181 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~  181 (410)
                       .+|++++..++  ...+.+||+|++++|+|+.+...     ++..|.++..+++..+ +++.+|++.+++.+.+  +++
T Consensus        88 -~sgt~a~~~~l--~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~--~~~  162 (402)
T cd00378          88 -HSGSQANLAVY--FALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE--FKP  162 (402)
T ss_pred             -CCcHHHHHHHH--HHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh--CCC
Confidence             46788888873  44467999999999999877544     5567777766665323 2688999999999864  255


Q ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC-CCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      +++++++|+||+.     .++++|+++|+++|+++|+|++| .++.+.+..  ...    ..  ...++++|+||.+  +
T Consensus       163 ~~v~~~~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~--~~~----~~--~~dv~~~s~sK~l--~  227 (402)
T cd00378         163 KLIVAGASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVF--PNP----LP--GADVVTTTTHKTL--R  227 (402)
T ss_pred             CEEEecCcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhcccC--CCc----cc--CCcEEEeccccCC--C
Confidence            6677778887753     36888999999999999999995 444332110  011    11  2247899999987  7


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA  340 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  340 (410)
                      |+|.||++  +.++++.+++.......   ..+++......++...+..  ..   ....++.+++++++++++.+.|+ 
T Consensus       228 G~~gg~i~--~~~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~~al~~--~~---~~~~~~~~~~~~~~~~~l~~~L~-  296 (402)
T cd00378         228 GPRGGLIL--TRKGELAKKINSAVFPG---LQGGPHLHVIAAKAVALKE--AL---EPEFKAYAKQVVENAKALAEALK-  296 (402)
T ss_pred             CCCceEEE--eccHHHHHHHHHHhCcc---ccCCchHHHHHHHHHHHHH--Hh---hHHHHHHHHHHHHHHHHHHHHHH-
Confidence            89999984  44437666654432211   1222222222222222211  10   11345677888999999999998 


Q ss_pred             ccCCCCCcccc-cCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------------C-eEEecC-----CCcccH
Q 015283          341 KDKSGKDWSFI-LRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISLAG-----LSLAKC  395 (410)
Q Consensus       341 ~~g~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------------g-Ris~~~-----~~~~~i  395 (410)
                      +.|+    .+. .+.+++++|+.+     +...+.++++++||.+.+.             + ||++..     ++++++
T Consensus       297 ~~g~----~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di  372 (402)
T cd00378         297 ERGF----KVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEM  372 (402)
T ss_pred             hCCC----eEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHH
Confidence            7773    433 356688888755     2455666777789999531             1 887643     358999


Q ss_pred             HHHHHHHHHHhhh
Q 015283          396 EYLADAIIDSYHN  408 (410)
Q Consensus       396 ~~~~~~l~~~l~~  408 (410)
                      +++++.|++++++
T Consensus       373 ~~~~~~l~~~~~~  385 (402)
T cd00378         373 EEIADFIARALKD  385 (402)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999998754

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.94  E-value=1.1e-24  Score=209.75  Aligned_cols=329  Identities=13%  Similarity=0.071  Sum_probs=213.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC----CccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE----NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +++-|..|      +..++|+.+.+++.+.+....    ...+.    .....+++|+.+++++...     ++++|++ 
T Consensus        18 ~~~yld~~------~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~-----~~~~v~~-   85 (403)
T TIGR01979        18 PLVYLDSA------ATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAA-----SDEEIVF-   85 (403)
T ss_pred             ceEEEeCc------cccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE-
Confidence            45555544      444557889998877653211    01111    1225678999999987433     1468999 


Q ss_pred             ecCChhhHHHHHHHHHH--HhCCCCEEEEcCCCCcch----hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283          107 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~--~~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~  180 (410)
                       ++|+++++.+++..+.  .+.+||.|+++++.|++.    ....+..|++++.++..  +++.+|++.+++.+.+   +
T Consensus        86 -~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~---~  159 (403)
T TIGR01979        86 -TRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTE---K  159 (403)
T ss_pred             -eCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhcc---C
Confidence             9999999988754332  246899999999987663    34556789999999873  5567899999998875   6


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      ++++++++|+||||...+   +++|.++|+++|+++++|++|...... .     .+    ...+.++++.|++|.+|++
T Consensus       160 ~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~-~-----~~----~~~~~d~~~~s~~K~~gp~  226 (403)
T TIGR01979       160 TKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMP-V-----DV----QALDCDFYVFSGHKMYGPT  226 (403)
T ss_pred             CeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCccc-c-----Cc----cccCCCEEEEecccccCCC
Confidence            788888999999999877   567777799999999999997543211 1     11    1224678899999999877


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHhh-----------------ccCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHH
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKRL-----------------ARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEM  322 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~  322 (410)
                      |  +|++++   +++.++.+.......                 .+...++++.....++...++.      +.+ ..++
T Consensus       227 G--~g~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~------~~~~g~~~  295 (403)
T TIGR01979       227 G--IGVLYG---KEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDY------LEAIGLEN  295 (403)
T ss_pred             C--ceEEEE---chHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHH------HHHhCHHH
Confidence            6  688755   666544432110000                 0000112233222222222211      111 2456


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCC-----cceeee--cCCCHHHHHHhhhcCcEEEcCC-------------
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-----IGMFSF--TGLNKAQSDNMTNKWHVYMTKD-------------  382 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~ll~~~gi~v~~~-------------  382 (410)
                      .+++..+.++.+.+.|+ .++.   +++..+.     ++++.|  .+.+...+.+.++++||.+.+|             
T Consensus       296 ~~~~~~~l~~~l~~~l~-~~~g---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~  371 (403)
T TIGR01979       296 IEAHEHELTAYALERLG-EIPG---LRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGV  371 (403)
T ss_pred             HHHHHHHHHHHHHHHHh-cCCC---EEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCC
Confidence            77888888889999887 6631   3443332     344433  2344545556667789998752             


Q ss_pred             -C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          383 -G--RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 -g--Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                       +  |||+.. .+++|++++++.|+++++.+
T Consensus       372 ~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~  402 (403)
T TIGR01979       372 PATCRASFYIYNTEEDIDALVEALKKVRKFF  402 (403)
T ss_pred             CCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence             2  999874 38899999999999988764

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.94  E-value=9.2e-25  Score=206.42  Aligned_cols=321  Identities=16%  Similarity=0.071  Sum_probs=203.7

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccC----cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y----~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .+++|+...+|   |.+. +|.+.+++.+.++....  ..|    .......++++++++++..       ++.+ +  +
T Consensus         2 ~~~~~~~~~~~---~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~~i-v--~   67 (349)
T cd06454           2 KVLNFCSNDYL---GLAN-HPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK-------EAAL-V--F   67 (349)
T ss_pred             CceecccCCcc---ccCC-CHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC-------CCEE-E--e
Confidence            35677766653   4443 47788888887753210  112    1233446778888877532       2334 4  4


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC--CCCcEEEEe
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLH  186 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii~  186 (410)
                      ++|++++..+  +...+.+||.|++++|+|+++...++..|++++.++.       +|.+++++.+.+.  +++++++++
T Consensus        68 ~sg~~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~  138 (349)
T cd06454          68 SSGYAANDGV--LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVT  138 (349)
T ss_pred             ccHHHHHHHH--HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEE
Confidence            6777777765  3344679999999999999998888888988877653       4677888887653  245678888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH-hhcCCcEEEEecccccccccCCCcc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      ++++||||...   ++++|+++|+++|+++|+|++|.....+ ....  ..... ....+.+++++|+||.++++|   |
T Consensus       139 ~~~~~~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~-~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g---G  209 (349)
T cd06454         139 EGVYSMDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYG-PHGR--GVEEFGGLTDDVDIIMGTLGKAFGAVG---G  209 (349)
T ss_pred             eccccCCCCcc---CHHHHHHHHHHcCCEEEEEccccccccC-CCCC--ChhhhccccccCcEEEeechhhhcccC---C
Confidence            99999999965   4678888899999999999998643221 1111  11111 123346899999999998655   8


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |++.   +++..+.+.........  ....+...+.++...++..      .+ .+..+++++++++.+.+.|. +++. 
T Consensus       210 ~i~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~------~~-~~~~~~~~~~~~~~l~~~l~-~~g~-  275 (349)
T cd06454         210 YIAG---SKELIDYLRSYARGFIF--STSLPPAVAAAALAALEVL------QG-GPERRERLQENVRYLRRGLK-ELGF-  275 (349)
T ss_pred             EEEC---CHHHHHHHHHhchhhhc--cCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH-hcCC-
Confidence            8643   66765555443221111  1123333333333333211      11 24667888899999999998 7763 


Q ss_pred             CCcccccCCcceeeec-C---CC-HHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHHHHHHHH
Q 015283          346 KDWSFILRQIGMFSFT-G---LN-KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       346 ~~~~~~~~~~~~~~~~-~---~~-~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                         ....+..+.+.+. .   .+ .++.+.+++ .||.+.++         +  ||++.. .+++++++++++|+++
T Consensus       276 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         276 ---PVGGSPSHIIPPLIGDDPAKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             ---cccCCCCCcEEEEeCCChHHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence               3333333333222 1   12 334566665 49998642         2  998864 5899999999999875

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.94  E-value=1.6e-24  Score=193.67  Aligned_cols=313  Identities=19%  Similarity=0.147  Sum_probs=201.2

Q ss_pred             ccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-h--C-C----------CCEEEEcC
Q 015283           71 KEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-Y--F-P----------GAKVLISS  135 (410)
Q Consensus        71 ~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~--~-~----------gd~Vl~~~  135 (410)
                      -+| +...|++++|+-.++.+.-.      +++|    ..||+.+++++..++.. +  . +          .-+.++|.
T Consensus        62 RNY~G~l~Gipe~r~l~a~llgv~------~~~v----iv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPv  131 (425)
T PF12897_consen   62 RNYPGGLDGIPEARELFAELLGVP------PENV----IVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPV  131 (425)
T ss_dssp             TSS-S-SS--HHHHHHHHHHHTS-------GGGE----EE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEE
T ss_pred             cCCCCccCChHHHHHHHHHHhCCC------HHHE----EEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecC
Confidence            569 88999999999999997443      7888    45788888876655432 1  1 1          23789999


Q ss_pred             CCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHH-HHHcC
Q 015283          136 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADV-IQEKN  213 (410)
Q Consensus       136 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~-~~~~~  213 (410)
                      |+|..+..+++..|.+.+.||+.++   ++|.+.+++++.+. +..+.++ ++.-+||||.++|.+..++++.+ +...+
T Consensus       132 PGYDRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~D  207 (425)
T PF12897_consen  132 PGYDRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAED-PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPD  207 (425)
T ss_dssp             S--HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTS-TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT
T ss_pred             CCchHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcC-CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcC
Confidence            9999999999999999999999543   58999999998652 3445444 44559999999999999999888 34579


Q ss_pred             CcccccccCCCCCC-CCCCCch-hHhHHH---hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283          214 HIPFFDVAYQGFAS-GSLDNDA-SSVRLF---ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA  288 (410)
Q Consensus       214 ~~li~Deay~~~~~-~~~~~~~-~~~~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~  288 (410)
                      ..|+.|++|.-... .+.+.+. ..+...   .+..++++.+.|+||.- .||.+++++..   +++.++.+++.+..  
T Consensus       208 FRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aa---S~~Nl~~~~~~~~~--  281 (425)
T PF12897_consen  208 FRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAA---SEANLAWIKKHLSV--  281 (425)
T ss_dssp             -EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE----HHHHHHHHHHHHH--
T ss_pred             eEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeec---CHHHHHHHHHHhcC--
Confidence            99999999964332 1111111 122222   34567999999999975 68999999644   77777777776551  


Q ss_pred             cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceeeecCC---C
Q 015283          289 RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL---N  364 (410)
Q Consensus       289 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~---~  364 (410)
                        .+.++.-+.|..-..++.|.+  +....|+++.++.++-+.+.+.+.|.++++ ..+.-++..|.+|||+.++.   +
T Consensus       282 --~tIgpdKvNQLRHvrff~d~~--gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~  357 (425)
T PF12897_consen  282 --QTIGPDKVNQLRHVRFFKDAE--GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGT  357 (425)
T ss_dssp             --H-S---HHHHHHHHHHHHSHH--THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-
T ss_pred             --ceeCccHHHHHHHHHHhcChh--hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCCh
Confidence              133677888888888888754  123678899999999999999888875665 22223788999999988743   5


Q ss_pred             HHHHHHhhhcCcEEEcCCC--------------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          365 KAQSDNMTNKWHVYMTKDG--------------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       365 ~~~~~~ll~~~gi~v~~~g--------------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      .+.+-++.++.||.++|.|              ||+.+..+.++++.+++.+.-+++
T Consensus       358 AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~  414 (425)
T PF12897_consen  358 AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK  414 (425)
T ss_dssp             HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence            6677788888999999964              998877788999999999877653

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.93  E-value=1.8e-24  Score=209.06  Aligned_cols=338  Identities=12%  Similarity=0.030  Sum_probs=206.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCC----cccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI----EGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      ...||+..|......|+.  +|.+.+++.+++...  ..|...    .-..++.+.+++++    +.  ..+++++  ++
T Consensus        36 ~~~id~~~~~~~~~lG~~--~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~----~~--~~~~v~~--~~  103 (413)
T cd00610          36 NRYLDFLSGIGVLNLGHN--HPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALT----PE--GLDKVFF--VN  103 (413)
T ss_pred             CEEEEcCccHHhhccCCC--CHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhC----CC--CCCEEEE--cC
Confidence            568999887432234543  688898888877442  334322    22345555555553    22  2578999  99


Q ss_pred             ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-------------CCCccceeeecC----CCcccChhhHHH
Q 015283          110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-------------RVPWSEYRYYDP----KTVGLDFEGMIA  172 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~----~~~~~d~~~l~~  172 (410)
                      ||++|+..+.+++..+.++++|++.+++|.+........             ..++..+|..+.    ..+..|++.+++
T Consensus       104 sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~  183 (413)
T cd00610         104 SGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEE  183 (413)
T ss_pred             cHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHH
Confidence            999999999777766678999999999998764433221             123444554211    124458899999


Q ss_pred             HHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          173 DIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       173 ~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      .+.+++.+..++++...+|++|..+ +.+.+++|.++|++||+++|+||+|.+++..+   ....... .+..++   +.
T Consensus       184 ~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g---~~~~~~~-~~~~~d---~~  256 (413)
T cd00610         184 ALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG---KMFAFEH-FGVEPD---IV  256 (413)
T ss_pred             HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhhHhh-cCCCCC---eE
Confidence            8876444566777666677889876 66669999999999999999999999875321   1111111 122223   34


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      |+||.++. |+|+||+++   ++++++.+.  ........+.+.+.+++.++...|+.-      .+  .+..++++++.
T Consensus       257 t~sK~l~~-g~~~g~~~~---~~~~~~~~~--~~~~~~~~t~~~~~~~~~a~~a~l~~l------~~--~~~~~~~~~~~  322 (413)
T cd00610         257 TLGKGLGG-GLPLGAVLG---REEIMDAFP--AGPGLHGGTFGGNPLACAAALAVLEVL------EE--EGLLENAAELG  322 (413)
T ss_pred             EEcccccC-ccccEEEEE---cHHHHHhhc--cCCCCCCCCCCcCHHHHHHHHHHHHHH------Hh--ccHHHHHHHHH
Confidence            88999995 899999854   777555540  112222122234444445544333210      11  23455666666


Q ss_pred             HHHHHHhhhccCCCCCcccccCCcceeeecCC--C-----------HHHHHHhhhcCcEEEcCCC----eEEecC-CCcc
Q 015283          332 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-----------KAQSDNMTNKWHVYMTKDG----RISLAG-LSLA  393 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~  393 (410)
                      +++.+.++ ++..........+..|.+.++.+  .           ..+...+++ +||.+.|++    |++++. .+++
T Consensus       323 ~~l~~~l~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~v~~~~~~~lR~~~~~~~t~~  400 (413)
T cd00610         323 EYLRERLR-ELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALE-RGLLLRPSGGNVIRLLPPLIITEE  400 (413)
T ss_pred             HHHHHHHH-HHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHH-CCeEEeecCCCEEEEECCCcCCHH
Confidence            67766666 54311011111123344544422  1           223455555 699999873    887654 3889


Q ss_pred             cHHHHHHHHHHHh
Q 015283          394 KCEYLADAIIDSY  406 (410)
Q Consensus       394 ~i~~~~~~l~~~l  406 (410)
                      ++++++++|++++
T Consensus       401 ~i~~~~~~l~~~l  413 (413)
T cd00610         401 EIDEGLDALDEAL  413 (413)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999998864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.93  E-value=7.4e-24  Score=204.87  Aligned_cols=337  Identities=15%  Similarity=0.096  Sum_probs=215.5

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +...+|+..|..-...|+.  +|.+.+++.+++.... ..+.+..+..++++++++++..       .+++.+  ++||+
T Consensus        47 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~-~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~~sGs  114 (423)
T TIGR00713        47 GNEYIDYVLSWGPLILGHA--HPRVVEAVKEALERGT-SYGAPTEAEILLAKEIISRVPS-------VEMVRF--VNSGT  114 (423)
T ss_pred             CCEEEEccccccccccCCC--CHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--eCCHH
Confidence            3568999988763345665  6999999988886543 2223566888999999998643       257888  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh---CCCCccceeeecC-------CCc---ccChhhHHHHHhcCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND---ARVPWSEYRYYDP-------KTV---GLDFEGMIADIKAAPG  179 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~-------~~~---~~d~~~l~~~i~~~~~  179 (410)
                      +|++.+.++.+.+...++|+..+++|.++...+..   .+......+..+.       ...   -.|++.+++.+.+.++
T Consensus       115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~  194 (423)
T TIGR00713       115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE  194 (423)
T ss_pred             HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence            99999988877777779999999999887543221   1111111111000       000   0278899988875333


Q ss_pred             CcEEEE-eCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          180 GSFILL-HGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       180 ~~~~ii-~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                      ++.+++ .+.++| +|.+.+ .+.+++|.++|++||+++|+||+|.++..+.    .+.. ......+++   .+|||.+
T Consensus       195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~----~~~~-~~~~~~pDi---~t~sK~l  265 (423)
T TIGR00713       195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL----GGAQ-EYFGVEPDL---TTLGKII  265 (423)
T ss_pred             cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc----chhH-HHhCCCcch---hhhhhhh
Confidence            545555 467888 798887 5779999999999999999999998886431    1111 112222332   3799999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l  334 (410)
                      + +|+|+||++.   ++++.+.+... .......+.+.+.+++.++...|+   ++.+       .++.++..+..++.+
T Consensus       266 ~-~G~pig~v~~---~~~i~~~~~~~-~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~-------~~~~~~~~~~~~~~l  333 (423)
T TIGR00713       266 G-GGLPVGAFGG---RREIMERLAPE-GPVYQAGTLSGNPLAMAAGLATLKLLDEEGV-------YTELDELAKRLAEGL  333 (423)
T ss_pred             c-CCCceeeeeE---HHHHHHhhCcC-CCeeeccCCCCCHHHHHHHHHHHHHHhcccH-------HHHHHHHHHHHHHHH
Confidence            9 8999999755   77755554321 011111222455555565544443   3222       245555566666666


Q ss_pred             HHHhhhccCCCCCccc-ccCCccee-eecCC------------CH----HHHHHhhhcCcEEEcCCC----eEEecCCCc
Q 015283          335 FDSLSAKDKSGKDWSF-ILRQIGMF-SFTGL------------NK----AQSDNMTNKWHVYMTKDG----RISLAGLSL  392 (410)
Q Consensus       335 ~~~l~~~~g~~~~~~~-~~~~~~~~-~~~~~------------~~----~~~~~ll~~~gi~v~~~g----Ris~~~~~~  392 (410)
                      .+.++ +.+.    .. ....+.++ +++..            +.    .+...+++ +||.+.+++    |++++. ++
T Consensus       334 ~~~~~-~~~~----~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~l~~~~-t~  406 (423)
T TIGR00713       334 SEVLE-DTGI----PHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPSQFEACFLSAAH-TE  406 (423)
T ss_pred             HHHHH-hcCC----CeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecCCccceeeECCC-CH
Confidence            66666 6653    22 22334444 32321            11    23446665 699987654    888764 99


Q ss_pred             ccHHHHHHHHHHHhhhc
Q 015283          393 AKCEYLADAIIDSYHNV  409 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++|.+++.++
T Consensus       407 ~~i~~~~~~l~~~l~~~  423 (423)
T TIGR00713       407 EDIENTIEAAEEVFAEL  423 (423)
T ss_pred             HHHHHHHHHHHHHHhhC
Confidence            99999999999998753

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.93  E-value=1.1e-23  Score=200.84  Aligned_cols=333  Identities=11%  Similarity=0.014  Sum_probs=209.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|..-...|+.  +|.+.+++.++++... . . +.....++++.+++++....+    .+.+++  +++|++
T Consensus        29 ~~~lD~~s~~~~~~lG~~--~p~v~~a~~~~~~~~~-~-~-~~~~~~~~~~~la~~l~~~~~----~~~~~~--~~sG~~   97 (377)
T PRK02936         29 KTYLDFTSGIAVCNLGHC--HPTVTKAVQEQLDDIW-H-V-SNLFTNSLQEEVASLLAENSA----GDLVFF--CNSGAE   97 (377)
T ss_pred             CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhcc-c-c-ccccCCHHHHHHHHHHHhcCC----CCEEEE--eCCcHH
Confidence            468999888632234553  6888888888875421 1 1 223446888999999866542    257888  899999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhCCCCcc---ceeeecCCCc--ccChhhHHHHHhcCCCCcEEEEeC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARVPWS---EYRYYDPKTV--GLDFEGMIADIKAAPGGSFILLHG  187 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~g~~~~---~v~~~~~~~~--~~d~~~l~~~i~~~~~~~~~ii~~  187 (410)
                      |++.+.++.......++|++.+++|.+... .+...+....   ..+..+...+  -.|++.+++.+.+   ++.++++.
T Consensus        98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~ii~e  174 (377)
T PRK02936         98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE---EVAAVMLE  174 (377)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC---CeEEEEEe
Confidence            999997655444444789999988875432 2222221110   1111100000  0278888888864   57778878


Q ss_pred             CCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283          188 CAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       188 ~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      .+++++|.. .+++.+++|.++|++||+++|+||+|.+|+..+   ..+..... ...+++   .++||.++ +|+|+||
T Consensus       175 ~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~-~~~~di---~t~sK~l~-~G~~ig~  246 (377)
T PRK02936        175 VVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQF-GLDPDI---VTVAKGLG-NGIPVGA  246 (377)
T ss_pred             cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhh-CCCCcE---EEEccccc-CCCccEE
Confidence            889999877 578889999999999999999999998876432   22222222 222233   37999999 8999999


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CC
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD--KS  344 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--g~  344 (410)
                      ++.   ++++.+.+    .......+.+++.+++.++...|+....        +...++++++.+++.+.|+ +.  +.
T Consensus       247 v~~---~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~l~~~~~--------~~~~~~~~~~~~~l~~~L~-~~~~~~  310 (377)
T PRK02936        247 MIG---KKELGTAF----GPGSHGSTFGGNPLAMAAAKEVLQVIKQ--------PSFLEEVQEKGEYFLQKLQ-EELEHL  310 (377)
T ss_pred             EEE---cHHHHhhc----cCCCCCCCCCCCHHHHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHHHHH-HHHhhC
Confidence            754   77754443    3222222334566677777666543210        1334555566666666665 42  11


Q ss_pred             CCCcccccCCcceeeecCCC--HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHh
Q 015283          345 GKDWSFILRQIGMFSFTGLN--KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l  406 (410)
                      +. +.... ..|+++|+.+.  .+.+.+.+.+.||.+.|+|    ||+++ ..+++++++++++|++++
T Consensus       311 ~~-~~~v~-~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        311 EC-VKNIR-GKGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             Cc-EEeEe-ecceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            00 11122 34677887663  3334444555799999875    88853 359999999999998864

>PRK07179 hypothetical protein; Provisional

Probab=99.93  E-value=1.3e-23  Score=202.33  Aligned_cols=322  Identities=15%  Similarity=0.088  Sum_probs=204.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CC-CccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GE-NKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~-~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      ..++++....|++...+    |.+++++.+++..    .+ ...| .+.....++++.+++++..        +.+++  
T Consensus        54 ~~~~~~~~~~YL~l~~~----p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~--  119 (407)
T PRK07179         54 PDAIILQSNDYLNLSGH----PDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--------ESCLL--  119 (407)
T ss_pred             CcEEEeecCCccCCCCC----HHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--------CcEEE--
Confidence            46789999988877765    5566665555422    11 1122 1223467888999998532        34566  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG  187 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~  187 (410)
                      +++|++|+..++.  ....+||.|++..+.|......+...|.++..++.       .|++.+++.+++  ..+.+++++
T Consensus       120 ~~sG~~An~~~l~--~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~--~~~~lV~v~  188 (407)
T PRK07179        120 CQSGWAANVGLLQ--TIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIER--HGPGIIVVD  188 (407)
T ss_pred             ECCHHHHHHHHHH--HhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHh--cCCeEEEEC
Confidence            8999999988743  33568999999999988887777777777655443       488999998875  236677789


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM  267 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l  267 (410)
                      +++||||.+.+   +++|.++|+++|+++|+||+|.....+ ..... .+..+.-....++++.|+||.+|   .|+||+
T Consensus       189 ~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g-~~g~g-~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l  260 (407)
T PRK07179        189 SVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHG-PQGAG-LVAELGLTSRVHFITASLAKAFA---GRAGII  260 (407)
T ss_pred             CCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcC-CCCCc-hHHhcCCCCCCCEEEeechHhhh---ccCeEE
Confidence            99999999887   567778899999999999998643322 11111 11111101123588999999986   368997


Q ss_pred             EEEeCCchhHHHHHHHHHhhccC-cccCC-ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          268 NVVCSSSDLAARVKSQLKRLARP-MYSNP-PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      ++   ++++++.+..    .... .++.+ +.....++...++.       .+...+.+++++++++++.+.|+ ++|. 
T Consensus       261 ~~---~~~~~~~~~~----~~~~~~~~~t~~~~~~aa~~aal~~-------~~~~~~~~~~l~~~~~~l~~~L~-~~g~-  324 (407)
T PRK07179        261 TC---PRELAEYVPF----VSYPAIFSSTLLPHEIAGLEATLEV-------IESADDRRARLHANARFLREGLS-ELGY-  324 (407)
T ss_pred             Ee---CHHHHHHHHH----hCcCeeeCCCCCHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHH-HcCC-
Confidence            54   6675444332    1111 12222 22111112222211       11123567889999999999998 8763 


Q ss_pred             CCcccccCCcceeeecCC----CHHHHHHhhhcCcEEE----cCC-----C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          346 KDWSFILRQIGMFSFTGL----NKAQSDNMTNKWHVYM----TKD-----G--RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v----~~~-----g--Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                         .+. +. +.++++.+    ..+.+.+.+.++||.+    .|+     +  ||+++. .|+++++++++.|++++.+.
T Consensus       325 ---~v~-~~-~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        325 ---NIR-SE-SQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             ---CCC-CC-CCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence               333 33 34444322    2234444455579973    332     2  999875 48999999999999988753

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.93  E-value=6.1e-24  Score=201.43  Aligned_cols=312  Identities=13%  Similarity=0.007  Sum_probs=196.8

Q ss_pred             ccHHHHHHHHHhhccCCCc-------cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh
Q 015283           53 VLDVVKKAENLMLERGENK-------EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY  125 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~-------~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~  125 (410)
                      +.+.+.+++.+........       .+....-+.++++.+++++..        +++++  ++|+++++..+.  ...+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--------~~i~~--~~g~t~al~~~l--~~~~   80 (361)
T cd06452          13 LTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--------DEARV--TPGAREGKFAVM--HSLC   80 (361)
T ss_pred             CCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--------ceEEE--eCCHHHHHHHHH--HHhc
Confidence            4688888888876321101       111112356889999998521        57888  999999998873  3446


Q ss_pred             CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC----CCcEEEEeCCCCCCCCCCCCHHH
Q 015283          126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQ  201 (410)
Q Consensus       126 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~----~~~~~ii~~~p~NPtG~~~~~~~  201 (410)
                      .+||+|+++.++|......++..|++++.++..+..++.+|++.+++.+++..    +++.++++++|+||||.   ..+
T Consensus        81 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~---~~~  157 (361)
T cd06452          81 EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGN---LHD  157 (361)
T ss_pred             CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCee---ecc
Confidence            79999999999887776678889999999988433346899999998886321    25677778999999998   466


Q ss_pred             HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283          202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK  281 (410)
Q Consensus       202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~  281 (410)
                      +++|+++|+++|+++|+|++|......   .   ..    ...+.+++++|+||.++ ++.|+||+++   +++.++++.
T Consensus       158 ~~~i~~~~~~~~~~vivD~a~~~g~~~---~---~~----~~~~~d~~~~s~~K~l~-~~~~~G~l~~---~~~~~~~l~  223 (361)
T cd06452         158 AKKIAKVCHEYGVPLLLNGAYTVGRMP---V---SG----KELGADFIVGSGHKSMA-ASAPIGVLAT---TEEWADIVF  223 (361)
T ss_pred             HHHHHHHHHHcCCeEEEECCcccCCcC---C---CH----HHcCCCEEEecCCcccc-CCCCeEEEEE---CHHHHHHHh
Confidence            788888899999999999998743211   1   11    12235789999999998 4569999855   677666654


Q ss_pred             HHHHhhc--c-Cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccccc--CC
Q 015283          282 SQLKRLA--R-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFIL--RQ  354 (410)
Q Consensus       282 ~~~~~~~--~-~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~--~~  354 (410)
                      .......  . ..+. ++....+..+...+..      +.+.+++..+ ..++++++.+.|+ ++ |    +++..  +.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~~~~-~~~~~~~l~~~L~-~l~g----~~v~~~~~~  291 (361)
T cd06452         224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPH------VKERVKRWDE-EVEKARWFVAELE-KIEG----IKQLGEKPK  291 (361)
T ss_pred             ccccccccceeeeeccccCchHHHHHHHHHHH------HHHHHHHHHH-HHHHHHHHHHHHh-cCCC----eEEECCCCC
Confidence            3221100  0 0011 1111111122221110      1122222222 2334578888888 77 5    33321  12


Q ss_pred             cceeeecCC------------C-HHHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHh
Q 015283          355 IGMFSFTGL------------N-KAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       355 ~~~~~~~~~------------~-~~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      ...|+.+..            + .++.+.|++ +||.+...+     |++..+.++++++.+++.|++++
T Consensus       292 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         292 NHDLMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             CCceEEEEcCCcchhhhhccccchhHHHHHHH-cCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            222322211            0 135566655 599975443     78875558999999999999875

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.93  E-value=3.6e-24  Score=207.23  Aligned_cols=327  Identities=14%  Similarity=0.095  Sum_probs=208.4

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCCC-----ccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGEN-----KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      |+|..+..++++.+.+++.+.+.....     ..|..   ....+++|+.+++++...     ++++|++  ++|+|+++
T Consensus        35 yLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~--t~g~t~al  107 (424)
T PLN02855         35 YLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINAS-----TSREIVF--TRNATEAI  107 (424)
T ss_pred             EeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE--eCCHHHHH
Confidence            334444455678899998776532110     11111   123568999999997542     1478999  99999999


Q ss_pred             HHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283          116 RLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA  189 (410)
Q Consensus       116 ~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p  189 (410)
                      ..++..+.  .+.+||+|+++++.|++    +....+..|.+++.++..  .++.+|++.+++.+.+   ++++++++++
T Consensus       108 ~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~---~t~lv~i~~~  182 (424)
T PLN02855        108 NLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT--PDEVLDVEQLKELLSE---KTKLVATHHV  182 (424)
T ss_pred             HHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHHhcc---CceEEEEeCc
Confidence            98754332  35699999999998765    344556789999988873  2345899999999875   6788888999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      +||||.+++.   ++|+++|+++|+++++|++|.. +..+.     .+    ...+.++++.|++|.+|++|  +||+++
T Consensus       183 ~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~~-g~~~~-----~~----~~~~~d~~~~s~~K~~gp~G--~G~l~~  247 (424)
T PLN02855        183 SNVLGSILPV---EDIVHWAHAVGAKVLVDACQSV-PHMPV-----DV----QTLGADFLVASSHKMCGPTG--IGFLWG  247 (424)
T ss_pred             cccccccCCH---HHHHHHHHHcCCEEEEEhhhhc-CCcCC-----Cc----hhcCCCEEEeecccccCCCc--cEEEEE
Confidence            9999998875   5677779999999999999742 21111     11    12234678999999888666  799866


Q ss_pred             EeCCchhHHHHHHHHHhh----------------ccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283          270 VCSSSDLAARVKSQLKRL----------------ARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQ  332 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  332 (410)
                         +++.++++.......                ......+.+.+...++ ...++   +..  ...+++++++.++.++
T Consensus       248 ---~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~---~~~--~~g~~~i~~~~~~l~~  319 (424)
T PLN02855        248 ---KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAID---YLS--EIGMDRIHEYEVELGT  319 (424)
T ss_pred             ---chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHH---HHH--HhCHHHHHHHHHHHHH
Confidence               666555442211000                0001112233322222 22222   110  1235677888888999


Q ss_pred             HHHHHhhhccCCCCCcccccC-------Ccceeee--cCCCHHHHH-HhhhcCcEEEcCC--------------C--eEE
Q 015283          333 KLFDSLSAKDKSGKDWSFILR-------QIGMFSF--TGLNKAQSD-NMTNKWHVYMTKD--------------G--RIS  386 (410)
Q Consensus       333 ~l~~~l~~~~g~~~~~~~~~~-------~~~~~~~--~~~~~~~~~-~ll~~~gi~v~~~--------------g--Ris  386 (410)
                      ++.+.|+ ++..   +++..+       ..++..+  .+.+.+.+. .|.+++||.+..|              +  |+|
T Consensus       320 ~l~~~L~-~~~g---~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS  395 (424)
T PLN02855        320 YLYEKLS-SVPG---VRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARAS  395 (424)
T ss_pred             HHHHHHh-cCCC---EEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEE
Confidence            9999887 6621   233321       1233322  244555444 4444449998753              1  999


Q ss_pred             ecC-CCcccHHHHHHHHHHHhhhc
Q 015283          387 LAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       387 ~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.. .|++|++++++.|++++..+
T Consensus       396 ~~~ynt~~di~~l~~~l~~~~~~~  419 (424)
T PLN02855        396 LYFYNTKEEVDAFIHALKDTIAFF  419 (424)
T ss_pred             eccCCCHHHHHHHHHHHHHHHHHH
Confidence            764 38899999999999988653

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.93  E-value=2.2e-23  Score=197.54  Aligned_cols=317  Identities=12%  Similarity=0.066  Sum_probs=201.7

Q ss_pred             CCcccccHHHHHHHHHhhccCCCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283           48 ELQPYVLDVVKKAENLMLERGENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        48 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      .|.+++++.+.+++.+.+..   ..|.. ..-.+++++.+++++...     .++.+++  +.+|++++..+.  ...+.
T Consensus         5 ~~~~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~g~~-----~~~~~~~--~~~~t~al~~~~--~~~~~   72 (356)
T cd06451           5 PGPSNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVFQTE-----NGLTFLL--SGSGTGAMEAAL--SNLLE   72 (356)
T ss_pred             CCCcCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHhcCC-----CCCEEEE--ecCcHHHHHHHH--HHhCC
Confidence            35556689999998665422   22321 112557788888886432     1344667  888899998873  34467


Q ss_pred             CCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283          127 PGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK  204 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~  204 (410)
                      +||+|+++.++|..  +...++..|++++.++..  .++.+|++++++.+++  .++.++++++|+||||.+.+   +++
T Consensus        73 ~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~---~~~  145 (356)
T cd06451          73 PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKP--WGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP---LEG  145 (356)
T ss_pred             CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecC--CCCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccC---HHH
Confidence            99999999987765  456778899999999873  3467899999999874  25667777899999999776   556


Q ss_pred             HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH--
Q 015283          205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS--  282 (410)
Q Consensus       205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~--  282 (410)
                      |.++|+++|+++++|++|. ++..     ...+   . ..+.++++.|.+|.++.| .++||+++   +++.++++..  
T Consensus       146 i~~~a~~~~~~li~D~~~~-~g~~-----~~~~---~-~~~~d~~~~s~~K~l~~p-~g~G~l~~---~~~~~~~~~~~~  211 (356)
T cd06451         146 IGALAKKHDALLIVDAVSS-LGGE-----PFRM---D-EWGVDVAYTGSQKALGAP-PGLGPIAF---SERALERIKKKT  211 (356)
T ss_pred             HHHHHHhcCCEEEEeeehh-ccCc-----cccc---c-ccCccEEEecCchhccCC-CCcceeEE---CHHHHHHHHhcC
Confidence            7777999999999999854 3321     0111   1 113346678899999854 45799865   6776665542  


Q ss_pred             -HHHh---------hc--cCcccCCChhHH-HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283          283 -QLKR---------LA--RPMYSNPPVHGA-RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS  349 (410)
Q Consensus       283 -~~~~---------~~--~~~~~~~~~~~~-~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~  349 (410)
                       ....         ..  ...+.+++...+ .++...++.  +.   ...+++..++.+++++++.+.|. ..|.    .
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~--l~---~~~~~~~~~~~~~~~~~l~~~L~-~~g~----~  281 (356)
T cd06451         212 KPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDL--IL---EEGLENRWARHRRLAKALREGLE-ALGL----K  281 (356)
T ss_pred             CCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHH--HH---HhhHHHHHHHHHHHHHHHHHHHH-HcCC----e
Confidence             0000         00  001222233322 222222221  10   12345677888889999999998 7763    3


Q ss_pred             cccC---CcceeeecC----CCH-HHHHHhhhcCcEEEcCC------C--eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          350 FILR---QIGMFSFTG----LNK-AQSDNMTNKWHVYMTKD------G--RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       350 ~~~~---~~~~~~~~~----~~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      ...+   ..+.+.|+.    .+. ++++++.+++||.+.++      +  |++++. .++++++++++.|+++++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~  356 (356)
T cd06451         282 LLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK  356 (356)
T ss_pred             eccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence            3221   123333432    233 44556655449999764      2  999864 388999999999998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.93  E-value=4.9e-24  Score=204.95  Aligned_cols=325  Identities=15%  Similarity=0.139  Sum_probs=203.8

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCC---CccCcCCcc----cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g----~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      .++|..+..++|+.+++++.+.+....   ...|....+    .+++|+.+++++...      +++|++  ++|+++++
T Consensus        19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~------~~~v~~--~~~~t~~l   90 (397)
T TIGR01976        19 VFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNAD------PPEVVF--GANATSLT   90 (397)
T ss_pred             EEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCC------CCeEEE--eCCHHHHH
Confidence            445555666678999999888764311   123533323    468888888886432      456888  89999988


Q ss_pred             HHHHHHHH-HhCCCCEEEEcCCCCcchh----hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          116 RLAAALIE-RYFPGAKVLISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       116 ~~~~~~~~-~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      ..+...+. .+.+||+|++++|.|.+..    ..++..|++++.++.. .+++.+|++++++.+.+   ++.++++++|+
T Consensus        91 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~i~~---~~~lv~i~~~~  166 (397)
T TIGR01976        91 FLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVD-EATGELHPDDLASLLSP---RTRLVAVTAAS  166 (397)
T ss_pred             HHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecc-ccCCCcCHHHHHHhcCC---CceEEEEeCCC
Confidence            87644443 3569999999999887643    4456789999988874 33467899999999874   67888889999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||||.+.+   +++|+++|+++|+++++|+++.. +..     ...+    ...+.++++.|++|.+|   .|+|++++ 
T Consensus       167 n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~-~~~-----~~~~----~~~~~d~~~~s~~K~~g---~~~G~l~~-  229 (397)
T TIGR01976       167 NTLGSIVD---LAAITELVHAAGALVVVDAVHYA-PHG-----LIDV----QATGADFLTCSAYKFFG---PHMGILWG-  229 (397)
T ss_pred             CCCCccCC---HHHHHHHHHHcCCEEEEehhhhc-ccc-----CCCH----HHcCCCEEEEechhhcC---CceEEEEE-
Confidence            99999764   77778889999999999999642 211     0111    12234566789999875   46899865 


Q ss_pred             eCCchhHHHHHHHHHhhccC-----ccc-CCChh---HHHHHHHHhCChh------hHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          271 CSSSDLAARVKSQLKRLARP-----MYS-NPPVH---GARIVANVVGNPA------LFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~---~~~~a~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                        +++.++++..........     ... +++..   +..++...+.+.+      ......+.+++.+++..+.++++.
T Consensus       230 --~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  307 (397)
T TIGR01976       230 --RPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLL  307 (397)
T ss_pred             --cHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence              777555543321110000     011 12211   2223333332211      111111235677888888999999


Q ss_pred             HHhhhccCCCCCcccccC-----Ccceeeec--CCCHHHHHHhhhcCcEEEcCC-----------------C--eEEecC
Q 015283          336 DSLSAKDKSGKDWSFILR-----QIGMFSFT--GLNKAQSDNMTNKWHVYMTKD-----------------G--RISLAG  389 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~ll~~~gi~v~~~-----------------g--Ris~~~  389 (410)
                      +.|+ +++.   +++..+     .++++.+.  +.+...+.+.|+++||.+..+                 +  |||+..
T Consensus       308 ~~L~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~  383 (397)
T TIGR01976       308 VGLS-DLPG---VTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAH  383 (397)
T ss_pred             HHHh-cCCC---EEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeec
Confidence            9998 7651   333322     33333221  234444444445569998743                 2  998754


Q ss_pred             -CCcccHHHHHHHH
Q 015283          390 -LSLAKCEYLADAI  402 (410)
Q Consensus       390 -~~~~~i~~~~~~l  402 (410)
                       .|++|++++++.|
T Consensus       384 ~~t~~di~~l~~~l  397 (397)
T TIGR01976       384 YNTAEEVDRLLEAL  397 (397)
T ss_pred             cCCHHHHHHHHHhC
Confidence             3888999998864

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.93  E-value=6.5e-24  Score=202.83  Aligned_cols=326  Identities=11%  Similarity=0.076  Sum_probs=211.1

Q ss_pred             eecCCCcccccHHHHHHHHHhhccC-----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERG-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA  118 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~-----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~  118 (410)
                      |+|..+.+++++.+++++.+.....     ..+.| +..+.+.++++++++.... +. .++++|++  |+|+|+++..+
T Consensus         2 yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~~-~~-~~~~~i~~--t~g~teal~~~   76 (382)
T TIGR03403         2 YLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKGI-NA-RDLDDIII--TSCATESNNWV   76 (382)
T ss_pred             cccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHHc-Cc-CCCCeEEE--eCCHHHHHHHH
Confidence            4677788888899999987776321     11223 3456778888888886432 22 14688999  99999999987


Q ss_pred             HHHHH--Hh-CC-CCEEEEcCCCCcchhhh---hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          119 AALIE--RY-FP-GAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       119 ~~~~~--~~-~~-gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ...+.  .+ .+ ||+|+++.+.|+.+...   ++..|.+++.++..  +++.+|++.+++.+++   ++.++++++|+|
T Consensus        77 ~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~--~~g~~d~~~l~~~i~~---~t~lv~~~~~~n  151 (382)
T TIGR03403        77 LKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN--EQGTITAEQVREAITE---KTALVSVMWANN  151 (382)
T ss_pred             HHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC--CCCCCCHHHHHHhccc---CCeEEEEEcccC
Confidence            54331  12 45 47899998777766544   45689999999873  4467899999998875   567888899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++.   ++|.++|+++|+++++|+++. ++..+.     .+    ...+.++++.|++|.+|++|+  |++++  
T Consensus       152 ~tG~~~~~---~~I~~la~~~g~~~ivD~a~~-~g~~~~-----~~----~~~~~D~~~~s~~K~~gp~G~--g~l~v--  214 (382)
T TIGR03403       152 ETGMIFPI---KEIGEICKERGVLFHTDAVQA-IGKIPV-----DV----QKAGVDFLSFSAHKFHGPKGV--GGLYI--  214 (382)
T ss_pred             CCccccCH---HHHHHHHHHcCCEEEEechhh-cCCCcc-----Cc----cccCCCEEEEcchhhCCCCce--EEEEE--
Confidence            99998875   567777999999999999955 331101     11    122345888999999888885  77754  


Q ss_pred             CCchhHHHHHHHHHh---hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          272 SSSDLAARVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                       ++..  .+...+..   .......+++..++.++...++.      ..+.++..++++++.++++.+.|+ +++.   +
T Consensus       215 -r~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~------~~~~~~~~~~~~~~l~~~l~~~L~-~~~~---~  281 (382)
T TIGR03403       215 -RKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL------ANEYLDFEKSHVRRLRDRLEDALL-ELPD---V  281 (382)
T ss_pred             -CCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHh-cCCC---E
Confidence             2221  01111100   00001123444444344433321      123356777889999999999998 7642   3


Q ss_pred             ccccCC----cc--eeeecCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCccc
Q 015283          349 SFILRQ----IG--MFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSLAK  394 (410)
Q Consensus       349 ~~~~~~----~~--~~~~~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~~~  394 (410)
                      .+..+.    .+  .|.+.+.+.+.+.+.|.++||.++.|                         +  |+|+.. .|++|
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~d  361 (382)
T TIGR03403       282 FVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEE  361 (382)
T ss_pred             EEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHH
Confidence            444332    11  22333445555444456679999842                         2  999775 48899


Q ss_pred             HHHHHHHHHHHhhhc
Q 015283          395 CEYLADAIIDSYHNV  409 (410)
Q Consensus       395 i~~~~~~l~~~l~~~  409 (410)
                      ++++++.|+++++++
T Consensus       362 id~~~~~l~~~~~~~  376 (382)
T TIGR03403       362 IDYTIEVFKKAVQRL  376 (382)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987653

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.93  E-value=2.5e-23  Score=199.99  Aligned_cols=329  Identities=14%  Similarity=0.084  Sum_probs=204.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .++++|+.++|+....    +|.+++++.+++.. +.     ...|.......+|++.+++++. .      +..++   
T Consensus        45 ~~~~~~~sn~ylgl~~----~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g-~------~~~l~---  110 (402)
T TIGR01821        45 KDVTVWCSNDYLGMGQ----HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG-K------ESALV---  110 (402)
T ss_pred             eeEEEeEccCcCCCCC----CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC-C------CeEEE---
Confidence            4689999998864444    47777777766643 11     0112233446789999999863 2      23344   


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEe
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH  186 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~  186 (410)
                      +++|++++..+..++....+|+.|+.....|......+...|.++..++.       .|++++++.++... ++++++++
T Consensus       111 ~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~  183 (402)
T TIGR01821       111 FTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAF  183 (402)
T ss_pred             ECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence            47788888877544432336777777666776666666667766544433       36777877776432 25678888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      ++|+||||.+.+   +++|.++|++||+++|+||+|....+++...   ++....+. ...+++++||||.+|.+|   |
T Consensus       184 e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~---g~~~~~~~~~~~div~~t~sKa~g~~G---G  254 (402)
T TIGR01821       184 ESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGG---GIAERDGLMHRIDIIEGTLAKAFGVVG---G  254 (402)
T ss_pred             cCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCC---ccchhccCCCCCeEEEEechhhhccCC---c
Confidence            999999999776   6677778999999999999987332221111   11111111 124688899999999877   8


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |++.   ++++++.+........  ...+.+..++.++...|+..      .+ ....+++.+++++++.+.|+ ++|. 
T Consensus       255 ~i~~---~~~~~~~l~~~~~~~~--~t~~~~~~~~aaa~aaL~~~------~~-~~~~~~~~~~~~~~l~~~L~-~~g~-  320 (402)
T TIGR01821       255 YIAA---SRKLIDAIRSYAPGFI--FTTSLPPAIAAGATASIRHL------KE-SQDLRRAHQENVKRLKNLLE-ALGI-  320 (402)
T ss_pred             eeec---CHHHHHHHHHhCcCce--ecCcCCHHHHHHHHHHHHHh------hc-CHHHHHHHHHHHHHHHHHHH-HcCC-
Confidence            8633   7776655543221111  11233443444443333321      11 13445566788888999998 8773 


Q ss_pred             CCcccccCCcceee-ecCC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          346 KDWSFILRQIGMFS-FTGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~~~~~~~~~~~~-~~~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                         ....+.+++.. .++.   ..++.+++++++||.+.+.       |    ||++.. .++++++++++.|+++++++
T Consensus       321 ---~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  397 (402)
T TIGR01821       321 ---PVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL  397 (402)
T ss_pred             ---CcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence               44445444332 2232   1234566666679998652       2    888753 48999999999999998764

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.93  E-value=3.5e-23  Score=199.43  Aligned_cols=328  Identities=14%  Similarity=0.086  Sum_probs=204.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .++++|+.++|+   |... +|.+.+++.+.+... .     ...|.+.....++++.+++++. .      ++.+++  
T Consensus        46 ~~~~~~~s~dyl---gl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~------~~~~~~--  112 (407)
T PRK09064         46 REVTVWCSNDYL---GMGQ-HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-K------EAALVF--  112 (407)
T ss_pred             ceEEEEECCCCc---CCCC-CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-C------CcEEEE--
Confidence            468899988774   4333 577888887766331 1     1123344557789999998853 2      344554  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEe
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH  186 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~  186 (410)
                       ++|++++..+..++....+++.|+.....|......+...|.++..++.       .|++++++.++... ++++++++
T Consensus       113 -~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~  184 (407)
T PRK09064        113 -TSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAF  184 (407)
T ss_pred             -CcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence             6677777776444433347776666666666665666666666554443       37788888776432 35678888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      ++++||+|.+.+   +++|.++|++||+++|+||+|....+++.. .  .+....+. ...+++++||||.+|++|   |
T Consensus       185 ~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g-~--g~~~~~~~~~~~div~~t~sKa~g~~G---G  255 (407)
T PRK09064        185 ESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRG-G--GIAERDGLMDRIDIIEGTLAKAFGVMG---G  255 (407)
T ss_pred             eCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCC-C--ChHHhcCCCCCCeEEEEecchhhhccC---c
Confidence            999999999665   667777799999999999998732222111 1  11111111 134788999999999877   8


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |++.   ++++++.+........  .....+..++.++...++   +.    +.....+++++++++++.+.|+ +.|  
T Consensus       256 ~~~~---~~~~~~~l~~~~~~~~--~t~~~~~~~~~aa~~al~---~~----~~~~~~~~~~~~~~~~l~~~L~-~~g--  320 (407)
T PRK09064        256 YIAG---SAALVDAVRSYAPGFI--FTTSLPPAIAAAALASIR---HL----KESNEERERHQERAAKLKAALD-AAG--  320 (407)
T ss_pred             eEec---CHHHHHHHHHhCcccc--ccCcCCHHHHHHHHHHHH---HH----hcCHHHHHHHHHHHHHHHHHHH-HcC--
Confidence            8643   7776665543222111  112233333333333332   11    1112346788889999999998 877  


Q ss_pred             CCcccccCCcceeeec--CC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          346 KDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       346 ~~~~~~~~~~~~~~~~--~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                        ++...+.+. ++.+  +.   ..++.+++++++||.+.+.       |    ||++.. .+++|++++++.|++++.+
T Consensus       321 --~~~~~~~~~-iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~  397 (407)
T PRK09064        321 --IPVMPNESH-IVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWAR  397 (407)
T ss_pred             --CCCCCCCCC-EEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence              344444443 3333  32   1234566766679998641       2    888753 4899999999999998865


Q ss_pred             c
Q 015283          409 V  409 (410)
Q Consensus       409 ~  409 (410)
                      +
T Consensus       398 ~  398 (407)
T PRK09064        398 L  398 (407)
T ss_pred             c
Confidence            4

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.93  E-value=1.7e-23  Score=200.89  Aligned_cols=328  Identities=16%  Similarity=0.090  Sum_probs=205.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|.--+..|+.  +|.+.+++.+.+... ....+....-..++.+.++++.    +    .+.+.+  +++|+
T Consensus        40 ~~~iD~~~~~~~~~lGh~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~sGs  107 (403)
T PRK05093         40 KEYIDFAGGIAVTALGHC--HPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT----F----AERVFF--ANSGA  107 (403)
T ss_pred             CEEEEcCcCHHhccCCCC--CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC----C----CCEEEE--eCchH
Confidence            468999877332344653  688888888877542 1111111112235555555542    1    257888  89999


Q ss_pred             hHHHHHHHHHHHhC------CCCEEEEcCCCCcchhh-hhhhCC------------CCccceeeecCCCcccChhhHHHH
Q 015283          113 GSLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus       113 ~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                      +|++.+.++.+.+.      ..++|+..+-+|.+... .+...|            .++..++.       .|++.+++.
T Consensus       108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  180 (403)
T PRK05093        108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAV  180 (403)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHH
Confidence            99999988776552      23578888877665432 222111            11222221       278888888


Q ss_pred             HhcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          174 IKAAPGGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      +.+   ++++++++ |.||+|.++  +.+.+++|.++|++||+++|+||+|.++++.+   ..+.... ....++   +.
T Consensus       181 l~~---~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~-~~~~pd---i~  249 (403)
T PRK05093        181 IDD---HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG---DLFAYMH-YGVTPD---IL  249 (403)
T ss_pred             hcC---CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchhhhh-cCCCCC---EE
Confidence            864   56666655 788887765  88999999999999999999999999887542   1222111 111123   45


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      ||||.++ +|+|+||++.   ++++++.+    .......+.+.+.+.|.++...|+...        ..+..+++++++
T Consensus       250 s~sK~l~-~G~rig~vv~---~~~i~~~l----~~~~~~~t~~~~~~~~~aa~a~L~~~~--------~~~~~~~~~~~~  313 (403)
T PRK05093        250 TSAKALG-GGFPIGAMLT---TAEIASHF----KVGTHGSTYGGNPLACAVAEAVFDIIN--------TPEVLEGVKARR  313 (403)
T ss_pred             Eeccccc-CCcceEEEEE---cHHHHhhc----CCCCCCCCCCCCHHHHHHHHHHHHHHh--------hccHHHHHHHHH
Confidence            8999999 8999999855   77744443    322222233455566666655442110        024457788888


Q ss_pred             HHHHHHhhhccCCCCCcccccCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC----eEEecCC-CcccHHHHH
Q 015283          332 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----RISLAGL-SLAKCEYLA  399 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g----Ris~~~~-~~~~i~~~~  399 (410)
                      +++.+.|+ +++....+....+..|.+.|+.+       ..+++.++++ .||.+.++|    ||+++.. +++++++++
T Consensus       314 ~~l~~~L~-~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~-~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~  391 (403)
T PRK05093        314 QRFVDGLQ-KINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAE-EGVMVLVAGPDVLRFAPSLVIEEADIDEGL  391 (403)
T ss_pred             HHHHHHHH-HHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHH-CCeEEecCCCCEEEEeCCCCCCHHHHHHHH
Confidence            88888887 76421111223345577777644       2345667766 599999865    8875543 899999999


Q ss_pred             HHHHHHhhhc
Q 015283          400 DAIIDSYHNV  409 (410)
Q Consensus       400 ~~l~~~l~~~  409 (410)
                      ++|++++..+
T Consensus       392 ~~l~~~l~~~  401 (403)
T PRK05093        392 ARFEKAVAKV  401 (403)
T ss_pred             HHHHHHHHHh
Confidence            9999988653

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.92  E-value=5.8e-23  Score=196.80  Aligned_cols=323  Identities=13%  Similarity=0.041  Sum_probs=211.6

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      |+..+++.+.+++......     |. ..+..++.+++.+.+...++... .+.+++  +++||+++..+  +...+.+|
T Consensus        16 GP~~~~~~V~~a~~~~~~~-----~~-~~~~~~~~~~~~~~l~~~~g~~~-~~~vi~--~~~gt~a~~~a--~~~~~~~G   84 (401)
T PLN02409         16 GPVNIPERVLRAMNRPNED-----HR-SPAFPALTKELLEDVKYIFKTKS-GTPFIF--PTTGTGAWESA--LTNTLSPG   84 (401)
T ss_pred             CCCCCCHHHHHHhcCCCCC-----CC-CHHHHHHHHHHHHHHHHHhCCCC-CCEEEE--eCCcHHHHHHH--HHhcCCCC
Confidence            5566789999988664311     21 23445666666665555444421 234666  78889998887  44457799


Q ss_pred             CEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283          129 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKI  205 (410)
Q Consensus       129 d~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~~~~~l~~i  205 (410)
                      |+|++++++|.+.  ...++..|.+++.++..  .+..+|++.+++.+++.. ++++++++++++||||.+++.+++.++
T Consensus        85 d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l  162 (401)
T PLN02409         85 DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESP--WGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKL  162 (401)
T ss_pred             CEEEEeCCCchhHHHHHHHHHcCCceEEEECC--CCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHH
Confidence            9999999888655  46677889999999873  334578999999987521 257778889999999999988877777


Q ss_pred             HHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHH-
Q 015283          206 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL-  284 (410)
Q Consensus       206 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~-  284 (410)
                      ++ |+++|+++|+|++++ ++..+.+.         ...+.++++.|.+|.++.| .++||+++   +++.++++.... 
T Consensus       163 ~~-~~~~g~~~vvD~v~s-~g~~~id~---------~~~~~D~~~~s~~K~l~~P-~G~G~l~~---~~~~~~~~~~~~~  227 (401)
T PLN02409        163 LD-CAQHPALLLVDGVSS-IGALDFRM---------DEWGVDVALTGSQKALSLP-TGLGIVCA---SPKALEASKTAKS  227 (401)
T ss_pred             Hh-hhccCcEEEEEcccc-cCCccccc---------cccCccEEEEcCccccCcC-CCcceeEE---CHHHHHHHhcCCC
Confidence            77 999999999999965 33211111         1223457778889998643 36899866   777666654210 


Q ss_pred             -----------Hhh-ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          285 -----------KRL-ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       285 -----------~~~-~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                                 ... ....+. +++...+.++...++.-     ....+++++++.+++++++.+.|+ ++|+    ++.
T Consensus       228 ~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~-----~~~G~e~i~~~~~~l~~~l~~~L~-~~g~----~~~  297 (401)
T PLN02409        228 PRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLI-----FEEGLENVIARHARLGEATRLAVE-AWGL----KLC  297 (401)
T ss_pred             CCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHH-HcCC----eec
Confidence                       000 000112 33333333333332211     123467888999999999999998 8874    332


Q ss_pred             cC----Ccceeeec----CCCH-HHHHHhhhcCcEEEcCC-----C---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          352 LR----QIGMFSFT----GLNK-AQSDNMTNKWHVYMTKD-----G---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       352 ~~----~~~~~~~~----~~~~-~~~~~ll~~~gi~v~~~-----g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+    ..+...++    +.+. ++...+++++||.+.+|     +   ||+..+ .+.+++..++++|.++++++
T Consensus       298 ~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~  373 (401)
T PLN02409        298 TKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV  373 (401)
T ss_pred             cCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence            22    12222222    3344 45567778889999876     2   998444 58899999999999998764

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.92  E-value=1.4e-23  Score=201.99  Aligned_cols=320  Identities=13%  Similarity=0.066  Sum_probs=202.0

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      ++++++.|.+    ++++ |+.+.++..+.  .. ...|.+     ..|..++++++++++.+.++.+  .+++.+  +.
T Consensus        21 ~~~~l~~g~~----~~~~-p~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~--~~   88 (398)
T cd00613          21 SMSFLGSGTY----KHNP-PAVIKRNILEN--EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASL--QD   88 (398)
T ss_pred             Cccccccccc----CCcC-cHHHHHHhccc--cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceec--cC
Confidence            5689999998    6653 45555545554  22 245655     6899999999999988776653  346666  56


Q ss_pred             ChhhHHHHHHHHHHHhCC--CCEEEEcCCCCcchhhhhhhCC----CCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          110 SGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFNDAR----VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~--gd~Vl~~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      +|+.+.+.+. ....+.+  ||.|++++|.|+.+...+...|    .+++.+++.  +++.+|++.+++.+.+   ++++
T Consensus        89 ~g~~~~~~~~-~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~t~~  162 (398)
T cd00613          89 EATAAAEAAG-LAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVSE---EVAA  162 (398)
T ss_pred             chHHHHHHHH-HHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcCC---CeEE
Confidence            5554444332 2223445  9999999999999988887766    888888873  3457899999998864   6777


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc---
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY---  260 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~---  260 (410)
                      +++++|+ |||.+.  +.+++|.++|++||+++|+|+++...... ...         ...+.+++++|++|.+ .|   
T Consensus       163 viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~-~~~---------~~~~~d~~~~s~~K~~-~p~g~  228 (398)
T cd00613         163 LMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL-KPP---------GEYGADIVVGNLQKTG-VPHGG  228 (398)
T ss_pred             EEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC-CCh---------HHcCCCEEEeeccccC-CCCCC
Confidence            7777775 899973  34699999999999999999986432211 111         1224678999999998 45   


Q ss_pred             -CCCcceEEEEeCCchhHHHHHHHHH--------------------------hhccCcccCCChhHHHHHHHHhCChhhH
Q 015283          261 -AERIGAMNVVCSSSDLAARVKSQLK--------------------------RLARPMYSNPPVHGARIVANVVGNPALF  313 (410)
Q Consensus       261 -G~r~G~l~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~a~~~l~~~~~~  313 (410)
                       |+|+||+++   ++++++.+.....                          ....+++...+...+.++..+....   
T Consensus       229 Ggp~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~---  302 (398)
T cd00613         229 GGPGAGFFAV---KKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG---  302 (398)
T ss_pred             CCCceeEEEE---hhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC---
Confidence             799999865   6665444211000                          0000011111122222222221111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee--eecCCC-------HHHHHHhhhcCcEEEcC---
Q 015283          314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGLN-------KAQSDNMTNKWHVYMTK---  381 (410)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~ll~~~gi~v~~---  381 (410)
                         .+.+++++++++++++++.+.|+ +++.    .. .+.+..+  +++.+.       .+++..|++ +||.+..   
T Consensus       303 ---~~g~~~~~~~~~~~~~~l~~~L~-~~~~----~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~-~gi~~~~~~~  372 (398)
T cd00613         303 ---PEGLKEIAERAHLNANYLAKRLK-EVGG----VL-PFNGPFFHEFVLRLPPLYGIRAEDLAKALID-GGFHAPTMYL  372 (398)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHH-hcCC----cc-cCCCCeeEEEEEEcCCcchHHHHHHHHhhhh-cCcccccccc
Confidence               22346788999999999999998 7763    21 1222222  233221       234556655 6988754   


Q ss_pred             -C-C--eEEecC-CCcccHHHHHHHH
Q 015283          382 -D-G--RISLAG-LSLAKCEYLADAI  402 (410)
Q Consensus       382 -~-g--Ris~~~-~~~~~i~~~~~~l  402 (410)
                       + +  |+++.. .|++|++++++.|
T Consensus       373 ~~~~~lRis~~~~~t~edid~~~~~L  398 (398)
T cd00613         373 PVDGTLMIEPTETETKEELDALLEAL  398 (398)
T ss_pred             CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence             2 2  888654 4899999998764

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=7e-23  Score=193.59  Aligned_cols=325  Identities=17%  Similarity=0.154  Sum_probs=222.7

Q ss_pred             eecCCCcccccHHHHHHHHHhhcc----CCCccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLER----GENKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      |+|+...++.|..+.+++.+.+..    .+...|..    ..-+++.|+.++++++...     .++|++  |.|+|+++
T Consensus        25 ylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~-----~~eIvf--t~~tT~al   97 (405)
T COG0520          25 YLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADS-----SDEIVF--TRGTTEAL   97 (405)
T ss_pred             EecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCC-----CCeEEE--eCChhHHH
Confidence            455666677789999998877622    12122322    2246789999999975541     378999  99999999


Q ss_pred             HHHHHHHHH-hCCCCEEEEcCCCCcch----hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          116 RLAAALIER-YFPGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       116 ~~~~~~~~~-~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      ++++..+.. +.+||+|++.+-.|.+.    ....+..|++++.+|+.  +++.++.+.++..+++   +++++.++..+
T Consensus        98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~---~Tklvais~vS  172 (405)
T COG0520          98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITP---KTKLVALSHVS  172 (405)
T ss_pred             HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCC---CceEEEEECcc
Confidence            998654433 57999999999888655    44555679999999983  6678999999998875   89999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc-cccccCCCcceEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK-NLGLYAERIGAMNV  269 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK-~~~~~G~r~G~l~~  269 (410)
                      |.||+   ..++++|+++|+++|+++++|.+++ ....+.+         .+..+.++++.|-.| .+|+.|  +|.+++
T Consensus       173 n~tG~---~~pv~~I~~la~~~ga~v~VDaaq~-~~h~~id---------v~~l~~Df~afsgHKwl~gP~G--iGvLy~  237 (405)
T COG0520         173 NVTGT---VNPVKEIAELAHEHGALVLVDAAQA-AGHLPID---------VQELGCDFLAFSGHKWLLGPTG--IGVLYV  237 (405)
T ss_pred             ccccc---cchHHHHHHHHHHcCCEEEEECccc-cCccCCC---------chhcCCCEEEEcccccccCCCc--eEEEEE
Confidence            99999   5557788888999999999999944 3321111         234468899999999 777667  578766


Q ss_pred             EeCCchhHHHHHHHHHh-----------------hccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          270 VCSSSDLAARVKSQLKR-----------------LARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                         .+++.+.+......                 .-..+..+.+.+.+.+. ...++   +..  .-.++++.++.+++.
T Consensus       238 ---r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~---~~~--~ig~~~i~~~e~~L~  309 (405)
T COG0520         238 ---RKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALD---YLL--EIGMEAIEAHERELT  309 (405)
T ss_pred             ---chHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHH---HHH--HHhHHHHHHHHHHHH
Confidence               77866655221100                 00001112333333322 22221   111  122568888889999


Q ss_pred             HHHHHHhhhccCCCCCcccccC----Ccceeee--cCCCHHHHHHhhhcCcEEEcCCC----------------eEEecC
Q 015283          332 QKLFDSLSAKDKSGKDWSFILR----QIGMFSF--TGLNKAQSDNMTNKWHVYMTKDG----------------RISLAG  389 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~~----~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~g----------------Ris~~~  389 (410)
                      +++.+.|+ +++.   +.+..+    ..+.+.|  .+.++..+...|.++||.++.|.                |+|++.
T Consensus       310 ~~~~~~L~-~~~~---v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~  385 (405)
T COG0520         310 EYLLEGLS-ELPG---VEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHL  385 (405)
T ss_pred             HHHHHHHh-cCCC---eEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEee
Confidence            99999998 7763   344433    3455544  35566666555566789998771                888664


Q ss_pred             -CCcccHHHHHHHHHHHhh
Q 015283          390 -LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       390 -~~~~~i~~~~~~l~~~l~  407 (410)
                       .|++|++++++.|+++.+
T Consensus       386 YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         386 YNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             cCCHHHHHHHHHHHHHHhh
Confidence             399999999999998864

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.92  E-value=8.7e-23  Score=195.63  Aligned_cols=325  Identities=11%  Similarity=0.110  Sum_probs=204.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+.++.. +...+.......++.+.++++.    +    .+.+.+  +++|+
T Consensus        40 ~~~lD~~~g~~~~~lGh~--~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~SGs  107 (396)
T PRK04073         40 NRYMDMLSAYSAVNQGHR--HPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT----G----KDMVLP--MNTGA  107 (396)
T ss_pred             CEEEEcCCCHHhccCCCC--CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC----C----CCeEEE--cCChH
Confidence            467888777542344554  588888888877542 1111222233445666666652    1    257888  89999


Q ss_pred             hHHHHHHHHHHHhC-------CC-CEEEEcCCCCcchh-hhhhhCCCC------------ccceeeecCCCcccChhhHH
Q 015283          113 GSLRLAAALIERYF-------PG-AKVLISSPTWGNHK-NIFNDARVP------------WSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus       113 ~a~~~~~~~~~~~~-------~g-d~Vl~~~p~y~~~~-~~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~  171 (410)
                      +|++.+.++.+.+.       +| ++|+...-+|.+.. ..+...+..            +..++.       .|++.++
T Consensus       108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~  180 (396)
T PRK04073        108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALK  180 (396)
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHH
Confidence            99999988776541       34 67888877665543 332222211            111221       2778888


Q ss_pred             HHHhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          172 ADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      +.+.+   +++++++++++||||.+++.+ .+++|.++|++||+++|+||+|.+++..   ...+... ..+..++++  
T Consensus       181 ~~i~~---~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~---g~~~~~~-~~~~~pdi~--  251 (396)
T PRK04073        181 AAITP---NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRT---GKLFACD-WDNVTPDMY--  251 (396)
T ss_pred             Hhccc---CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcC---cHHHHhh-hcCCCCCEE--
Confidence            88864   678888899999999998765 5999999999999999999999988643   1222211 112223333  


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                       ++||.+|.+|+|+||+++   ++++.+.+    .......+.+.+.+++.++...|+..      .+  +...++.+++
T Consensus       252 -~~sK~lg~gg~~ig~~~~---~~~i~~~~----~~~~~~~t~~~~~~~~aaa~aaL~~~------~~--~~l~~~~~~~  315 (396)
T PRK04073        252 -ILGKALGGGVFPISCVAA---NRDILGVF----TPGSHGSTFGGNPLACAVSIAALEVL------EE--EKLPERSLEL  315 (396)
T ss_pred             -EecccccCCCCcceEEEE---cHHHHhhh----cCCCCCCCCCCCHHHHHHHHHHHHHH------Hh--cCHHHHHHHH
Confidence             589999988899999855   77755443    22222222345566666665555311      00  1334566677


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCC--C-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAI  402 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l  402 (410)
                      ++++.+.|+ +++.+. +....+. |.|+++.+  + .++..++++ +||.+.+.+    ||+.+ ..+++++++++++|
T Consensus       316 ~~~l~~~L~-~l~~~~-i~~~~~~-g~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l  391 (396)
T PRK04073        316 GEYFKEQLK-EIDNPM-IKEVRGR-GLFIGVELNEPARPYCEALKE-EGLLCKETHETVIRFAPPLVITKEELDWAFEKI  391 (396)
T ss_pred             HHHHHHHHH-hhcCCc-ccceecc-eEEEEEEecchHHHHHHHHHH-CCeEEecCCCCEEEEECCcccCHHHHHHHHHHH
Confidence            888888888 764211 2333344 55665544  2 344566655 699998753    88853 24999999999999


Q ss_pred             HHHh
Q 015283          403 IDSY  406 (410)
Q Consensus       403 ~~~l  406 (410)
                      ++++
T Consensus       392 ~~~l  395 (396)
T PRK04073        392 KAVL  395 (396)
T ss_pred             HHHh
Confidence            9875

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.92  E-value=9.9e-23  Score=193.01  Aligned_cols=316  Identities=17%  Similarity=0.107  Sum_probs=201.0

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      |+..+++.+.+++..... .....|.  .-..++|+.+++++....    +...|++  +.||++++..+  +...+.+|
T Consensus         6 ~p~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~la~~~~~~~----~~~~i~~--~~~gt~~l~~~--~~~~~~~~   74 (355)
T TIGR03301         6 GPLSTSATVRDAMLVDWC-HWDSEFN--DVTDQVRDRLLALAGGDD----NHTCVLL--QGSGTFAVEAT--IGSLVPRD   74 (355)
T ss_pred             CCCCCCHHHHHHhhhhcc-CCCHHHH--HHHHHHHHHHHHHhcCCC----CCcEEEE--eCCcHHHHHHH--HHhccCCC
Confidence            334457888888877321 1112342  346688888888864431    1235667  89999999998  34446678


Q ss_pred             CEEEEcCC-CCcc-hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          129 AKVLISSP-TWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       129 d~Vl~~~p-~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      |+|++..+ .|+. +...++..|.+++.++.  ++++.+|++.+++.++++ ++..++++++++||||...+   +++|+
T Consensus        75 ~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~---~~~i~  148 (355)
T TIGR03301        75 GKLLVLINGAYGERLAKICEYLGIPHTDLNF--SEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILNP---LEAIA  148 (355)
T ss_pred             CeEEEECCCchhhHHHHHHHHcCCceEEEec--CCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchhH---HHHHH
Confidence            88776655 4544 45667788999998887  345678999999998763 34556667889999999554   77888


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      ++|++||+++|+|++++ ++..  +   ..+    ...+.+++++|++|.+ |++|  +||+++   +++.++++.....
T Consensus       149 ~l~~~~~~~livD~~~s-~g~~--~---~~~----~~~~~d~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~~~~~~  213 (355)
T TIGR03301       149 KVARSHGAVLIVDAMSS-FGAI--P---IDI----EELDVDALIASANKCLEGVPG--FGFVIA---RRDLLEASAGNAR  213 (355)
T ss_pred             HHHHHcCCEEEEEeccc-cCCc--c---cch----hhcCccEEEecCCcccccCCc--eeEEEE---CHHHHHHhhCCCC
Confidence            88999999999998754 3321  1   111    1224568899999986 5556  599866   7776666541000


Q ss_pred             -----------hh--ccCcccCCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          286 -----------RL--ARPMYSNPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       286 -----------~~--~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                                 ..  ......+++...+.++...++.  +   ..+. +++.+++++++++++.+.|+ ++|.    .+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~--~---~~~g~~~~~~~~~~~~~~~~~~~L~-~~g~----~~~  283 (355)
T TIGR03301       214 SLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEE--L---EAEGGVPARIARYRRNRELLVDGLR-ALGF----QPL  283 (355)
T ss_pred             CceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHH--H---HHcccHHHHHHHHHHHHHHHHHHHH-HcCC----eee
Confidence                       00  0111123444443433333321  1   0111 45677788999999999998 8773    322


Q ss_pred             cC---CcceeeecCC------CHHHHHHhhhcCcEEEcCCC-------eEEe-cCCCcccHHHHHHHHHHHh
Q 015283          352 LR---QIGMFSFTGL------NKAQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       352 ~~---~~~~~~~~~~------~~~~~~~ll~~~gi~v~~~g-------Ris~-~~~~~~~i~~~~~~l~~~l  406 (410)
                      .+   .++.++|+.+      +.+.+.+.+++.||.+.+++       ||++ ...++++++++++.|++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~  355 (355)
T TIGR03301       284 LPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL  355 (355)
T ss_pred             cCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence            22   2344444432      22344444455699998863       9986 3458899999999998864

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.92  E-value=4.8e-23  Score=195.96  Aligned_cols=319  Identities=14%  Similarity=0.036  Sum_probs=202.7

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      |+..+++.+++++.+.. ......|.  .-..++|+.+++++...    -+.+.+++  +.+|+.++..+  +.+.+.+|
T Consensus        12 gP~~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~~~----~~~~~i~~--~~~gt~~l~~~--~~~l~~~~   80 (368)
T PRK13479         12 GPLTTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIATGE----EGYTCVPL--QGSGTFSVEAA--IGSLVPRD   80 (368)
T ss_pred             CCCCCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhCCC----CCceEEEE--cCCcHHHHHHH--HHhccCCC
Confidence            44445788888876643 21112242  35678888888886532    11244767  89999999998  44456799


Q ss_pred             CEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          129 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       129 d~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      |.|+++.++|.+.  ...++..|++++.++..  .++.+|++++++.+++. ++.+++.+++|+||||...+   +++|.
T Consensus        81 ~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~---~~~i~  154 (368)
T PRK13479         81 GKVLVPDNGAYGARIAQIAEYLGIAHVVLDTG--EDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILNP---LDEIA  154 (368)
T ss_pred             CeEEEEeCCchHHHHHHHHHHcCCcEEEEECC--CCCCCCHHHHHHHHHhC-CCCcEEEEEcccCccccccC---HHHHH
Confidence            9999988877655  36778899999999873  44678999999988752 34556667999999999766   56777


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      ++|+++|+++|+|++ +.++..+     ..+    ...+..+++.|++|.+ |++|  +||+++   +++.++++.....
T Consensus       155 ~l~~~~~~~livDa~-~~~g~~~-----~~~----~~~~~d~~v~s~~K~l~g~~G--~G~l~~---~~~~~~~~~~~~~  219 (368)
T PRK13479        155 AVAKRHGKRLIVDAM-SSFGAIP-----IDI----AELGIDALISSANKCIEGVPG--FGFVIA---RRSELEACKGNSR  219 (368)
T ss_pred             HHHHHcCCEEEEEcc-cccCCcc-----ccc----cccCceEEEecCccccccCCC--ceEEEE---CHHHHHHhhcCCC
Confidence            779999999999955 5555321     111    1112447778999965 6777  599866   7776665443110


Q ss_pred             h--------h-----ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          286 R--------L-----ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       286 ~--------~-----~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      .        .     ......+++.....++...+..  +.+  ...+++..++++++++++.+.|+ ++|+    ....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~--l~~--~~~~~~~~~~~~~~~~~l~~~L~-~~g~----~~~~  290 (368)
T PRK13479        220 SLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLE--LEE--EGGVPARGARYANNQRTLVAGMR-ALGF----EPLL  290 (368)
T ss_pred             CeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHH-HcCC----cccC
Confidence            0        0     0001012332222222222211  000  01235667888999999999998 8874    3221


Q ss_pred             C---C--cceeeecC----CCH-HHHHHhhhcCcEEEcCCC-------eEEe-cCCCcccHHHHHHHHHHHhhhc
Q 015283          353 R---Q--IGMFSFTG----LNK-AQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       353 ~---~--~~~~~~~~----~~~-~~~~~ll~~~gi~v~~~g-------Ris~-~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +   .  .....+..    .+. ++..++.+ +||.+.++.       |++. ...++++++++++.|+++++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~  364 (368)
T PRK13479        291 DAEIQSPIIVTFHAPADPAYDFKEFYERLKE-QGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM  364 (368)
T ss_pred             CchhcCceEEEEECCCCCCcCHHHHHHHHHH-CCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence            1   1  11222222    233 34555554 699998752       9984 5568999999999999998764

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.92  E-value=7.6e-23  Score=195.30  Aligned_cols=316  Identities=13%  Similarity=0.029  Sum_probs=200.8

Q ss_pred             cccHHHHHHHHHhhccCC-------CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283           52 YVLDVVKKAENLMLERGE-------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER  124 (410)
Q Consensus        52 ~~~~~v~~a~~~~~~~~~-------~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~  124 (410)
                      ++++.+.+++.+......       ...+.....+.++++.+++++..        +++.+  ++|+++++..+  +...
T Consensus        31 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--------~~~~~--~~g~t~a~~~a--l~~l   98 (387)
T PRK09331         31 ILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--------DEARV--THGAREGKFAV--MHSL   98 (387)
T ss_pred             CCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHh
Confidence            347889999888763211       11122233578999999999632        35667  89999999887  4444


Q ss_pred             hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEeCCCCCCCCCCCCHH
Q 015283          125 YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPE  200 (410)
Q Consensus       125 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~~~p~NPtG~~~~~~  200 (410)
                      +.+||+|+++.++|......++..|++++.++...++++.+|++.+++.+++.    .+++.++++++|+||||.   ..
T Consensus        99 ~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~---~~  175 (387)
T PRK09331         99 CKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGN---LA  175 (387)
T ss_pred             cCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcc---cc
Confidence            67999999999998877777888999999998732346779999999988752    135778888999999998   55


Q ss_pred             HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283          201 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       201 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      ++++|+++|+++|+++++|++|.....+ .+     ..    ..+.++++.|++|.++ .+.|+||+++   +++.++.+
T Consensus       176 ~l~~I~~la~~~g~~livD~a~~~g~~~-~~-----~~----~~g~D~~~~s~~K~l~-~~~~~G~l~~---~~~~i~~~  241 (387)
T PRK09331        176 DAKKVAKVAHEYGIPFLLNGAYTVGRMP-VD-----GK----KLGADFIVGSGHKSMA-ASAPSGVLAT---TEEYADKV  241 (387)
T ss_pred             cHHHHHHHHHHcCCEEEEECCcccCCcC-CC-----HH----HcCCCEEEeeCccccc-CCCCEEEEEE---CHHHHhhc
Confidence            6888888899999999999997643211 11     11    1235688999999998 4568899755   77766654


Q ss_pred             HHHHHhhcc-C--ccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccccc--C
Q 015283          281 KSQLKRLAR-P--MYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFIL--R  353 (410)
Q Consensus       281 ~~~~~~~~~-~--~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~--~  353 (410)
                      ......+.. .  .+. +.+.....++...+.  .    +.+.. +..++..++.+++.+.|+ ++ |    +++..  +
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~--~----~~~~~-~~~~~~~~~~~~l~~~L~-~l~g----~~~~~~~~  309 (387)
T PRK09331        242 FRTSRKFGVKEVELLGCTLRGAPLVTLMASFP--H----VVERV-KRWDEEVKKARWFVDELE-KIEG----FKQLGEKP  309 (387)
T ss_pred             ccccCCCcccceeeeceecCchHHHHHHHHHH--H----HHHHH-HHHHHHHHHHHHHHHHHh-cCCC----EEEeccCc
Confidence            332111100 0  011 111111111111111  1    11222 233444567778888998 88 5    33331  1


Q ss_pred             Ccceeeec---CC---------C-HHHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          354 QIGMFSFT---GL---------N-KAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       354 ~~~~~~~~---~~---------~-~~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ....+..+   .+         + ..+.+.| +++||...+.+     |+...+.++++++++++.|+++++++
T Consensus       310 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~  382 (387)
T PRK09331        310 RNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKEIAEKY  382 (387)
T ss_pred             CcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence            11222211   11         1 2244555 45699954433     66654569999999999999987754

>PRK07049 methionine gamma-lyase; Validated

Probab=99.91  E-value=2.2e-22  Score=192.96  Aligned_cols=225  Identities=17%  Similarity=0.138  Sum_probs=159.3

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----h
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~  146 (410)
                      .+| +......|++.++++..        .+++++  ++||++++..+  +...+.+||+|++++|+|+.+...+    +
T Consensus        78 ~R~-~~Pt~~~Le~~lA~leg--------~~~~iv--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~  144 (427)
T PRK07049         78 SRF-NHPNSEIVEDRLAVYEG--------AESAAL--FSSGMSAIATT--LLAFVRPGDVILHSQPLYGGTETLLAKTFR  144 (427)
T ss_pred             cCC-CCcCHHHHHHHHHHHhC--------CCcEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHH
Confidence            445 45567899999999952        235666  79999998877  4556789999999999999997654    4


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH---cCCccccccc
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE---KNHIPFFDVA  221 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~---~~~~li~Dea  221 (410)
                      ..|.+++.++.  .    .|++.+++.+.+.  .++++++++++|+||||.+++.+++.+|++.|..   +++++|+||+
T Consensus       145 ~~Gi~~v~~~~--~----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet  218 (427)
T PRK07049        145 NFGVGAVGFAD--G----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT  218 (427)
T ss_pred             hcCcEEEEEeC--C----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence            56777655542  1    4667777666431  1367788889999999999999999999888754   6899999999


Q ss_pred             CCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHH
Q 015283          222 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA  300 (410)
Q Consensus       222 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (410)
                      |..+...    .  ++     ..+.++++.|+||.++ .+|+|+||++   .++++++++....    .......+...+
T Consensus       219 y~~~~~~----~--pl-----~~g~divv~S~SK~~gG~~glr~G~vv---~~~~l~~~l~~~~----~~~g~~ls~~~a  280 (427)
T PRK07049        219 LLGPVFQ----K--PL-----EHGADLSVYSLTKYVGGHSDLVAGAVL---GRKALIRQVRALR----SAIGTQLDPHSC  280 (427)
T ss_pred             ccccccC----C--cc-----ccCCCEEEEcCceeecCCCCcEEEEEE---CCHHHHHHHHHHH----HhcCCCCCHHHH
Confidence            8765421    1  11     1235788999999998 6999999974   3777666655422    222234566666


Q ss_pred             HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .++...|+.-          ....++..+++..+.+.|+ +.+
T Consensus       281 ~l~~r~L~tl----------~~R~~~~~~~a~~la~~L~-~~p  312 (427)
T PRK07049        281 WMLGRSLETL----------VLRMERANRNARAVAEFLR-DHP  312 (427)
T ss_pred             HHHHcCCChH----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence            6666665532          2334455778888888887 663

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.91  E-value=8.6e-23  Score=195.93  Aligned_cols=335  Identities=14%  Similarity=0.048  Sum_probs=207.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++... + ...| ......++.+.+++..    +    .+.+.+  +++|
T Consensus        39 ~~~lD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~----~~~v~~--~~sG  105 (406)
T PRK12381         39 KEYIDFAGGIAVNALGHA--HPALREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFF--CNSG  105 (406)
T ss_pred             CEEEEcCcCHhhccCCCC--CHHHHHHHHHHHhhcccccCcc-CCHHHHHHHHHHHhhC----C----CCeEEE--cCCc
Confidence            468899886443355665  588998888877542 1 1122 1222345666666552    1    368888  9999


Q ss_pred             hhHHHHHHHHHHHhC------CCCEEEEcCCCCcchhhhhhhCCCCcc----ceeeec--CCCcccChhhHHHHHhcCCC
Q 015283          112 TGSLRLAAALIERYF------PGAKVLISSPTWGNHKNIFNDARVPWS----EYRYYD--PKTVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       112 t~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~~~~~~g~~~~----~v~~~~--~~~~~~d~~~l~~~i~~~~~  179 (410)
                      ++|++.+.++.+.+.      +..+|+..+.+|.+........+....    ..++.+  ....-.|++.+++.+.+   
T Consensus       106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---  182 (406)
T PRK12381        106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD---  182 (406)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC---
Confidence            999999988876652      447899999988776543322221110    001100  00011378888888864   


Q ss_pred             CcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          180 GSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                      ++.++++ .|.||+|.+.  +.+.+++|.++|++||+++|+||+|.+++..+   ..+.... ....+++   .|+||.+
T Consensus       183 ~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G---~~~~~~~-~~v~pDi---~t~sK~l  254 (406)
T PRK12381        183 QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMH-YGVTPDV---LTTAKAL  254 (406)
T ss_pred             CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc---chhhhHh-hCCCCCE---EEehhhh
Confidence            5666664 6899998755  68889999999999999999999998886432   2222211 1112232   4999999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      + +|+|+||++.   ++++++.+    .......+.+.+.+.+.++...|+--      .  .++.+++++++.+++.+.
T Consensus       255 ~-gG~~ig~~~~---~~~~~~~~----~~~~~~~t~~~~pl~~aaa~a~l~~l------~--~~~~~~~~~~~~~~l~~~  318 (406)
T PRK12381        255 G-GGFPIGAMLT---TEKCASVM----TVGTHGTTYGGNPLASAVAGKVLELI------N--TPEMLNGVKQRHDWFVER  318 (406)
T ss_pred             h-CCCceEEEEE---cHHHHhhc----CCCCCCCCCCCCHHHHHHHHHHHHHH------h--hccHHHHHHHHHHHHHHH
Confidence            8 8999999855   67744443    33222223344555555554433211      0  124567788888888888


Q ss_pred             hhhccCCCCCcccccCCcceeeecCCC------HHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHh
Q 015283          338 LSAKDKSGKDWSFILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                      |+ +++....+....+..|.+.++.+.      ...+...+.++||.+.+.+    ||+++. .+++++++++++|++++
T Consensus       319 L~-~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l  397 (406)
T PRK12381        319 LN-TINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFARAC  397 (406)
T ss_pred             HH-HHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence            87 664211111122334566555432      1233344445799998654    888764 59999999999999998


Q ss_pred             hhc
Q 015283          407 HNV  409 (410)
Q Consensus       407 ~~~  409 (410)
                      +++
T Consensus       398 ~~~  400 (406)
T PRK12381        398 ERF  400 (406)
T ss_pred             HHH
Confidence            754

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.91  E-value=4.4e-23  Score=187.79  Aligned_cols=327  Identities=18%  Similarity=0.112  Sum_probs=226.3

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccC-----CCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERG-----ENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~-----~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      .|+|++.++++.|++.+++..++...     ..+.|+  ...-+++.|+.+|+.+...      +++|+|  |+|||++.
T Consensus         3 iYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~------~~eIiF--TSG~TEsn   74 (386)
T COG1104           3 IYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGAD------PEEIIF--TSGATESN   74 (386)
T ss_pred             ccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--ecCCcHHH
Confidence            35788888888999999987776331     223332  1224678899999997554      789999  99999999


Q ss_pred             HHHHHHHHH-h-C--CCCEEEEcCCCCcchhhhhhhC---CCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283          116 RLAAALIER-Y-F--PGAKVLISSPTWGNHKNIFNDA---RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC  188 (410)
Q Consensus       116 ~~~~~~~~~-~-~--~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~  188 (410)
                      +++..-... . .  .|.+|+++.-.++...+.++..   |.++.+++.  ..++.+|+++|++.+++   ++.++-+..
T Consensus        75 NlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V--~~~G~v~~e~L~~al~~---~T~LVSim~  149 (386)
T COG1104          75 NLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPV--DSNGLVDLEQLEEALRP---DTILVSIMH  149 (386)
T ss_pred             HHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCC--CCCCeEcHHHHHHhcCC---CceEEEEEe
Confidence            998543111 2 1  5789999999998887777655   889999988  45788999999999986   788888888


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      .||.||+   ..++++|.++|+++++++.+|.+ +.++--+.+         .....-++...|-+|..|+.|  +|+++
T Consensus       150 aNnE~G~---IQpI~ei~~i~k~~~i~fHvDAv-Qa~Gkipi~---------~~~~~vD~ls~SaHK~~GpkG--iGaLy  214 (386)
T COG1104         150 ANNETGT---IQPIAEIGEICKERGILFHVDAV-QAVGKIPID---------LEELGVDLLSFSAHKFGGPKG--IGALY  214 (386)
T ss_pred             cccCeee---cccHHHHHHHHHHcCCeEEEehh-hhcCceecc---------ccccCcceEEeehhhccCCCc--eEEEE
Confidence            9999999   56677888889999999999999 666532111         112225677788999999888  58885


Q ss_pred             EEeCCch-hHHHHHH--HHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CC
Q 015283          269 VVCSSSD-LAARVKS--QLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KS  344 (410)
Q Consensus       269 ~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~  344 (410)
                      +   ++. ..+.+..  -...-.++-+.+.+.++..+.+.-+.        .++++....++...|+++.+.|. +. +.
T Consensus       215 v---~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a--------~~~~~~~~~~~~~lr~~l~~~l~-~~~p~  282 (386)
T COG1104         215 V---RPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIA--------VEELEEENARLRKLRDRLEDGLL-EIIPD  282 (386)
T ss_pred             E---CCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-hcCCc
Confidence            4   332 1111110  00111233333444443322222211        33456777888889999999998 65 21


Q ss_pred             ---CCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC-----------------C----------eEEecCC-Ccc
Q 015283          345 ---GKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-----------------G----------RISLAGL-SLA  393 (410)
Q Consensus       345 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~-----------------g----------Ris~~~~-~~~  393 (410)
                         .+.-..-.|....+.|.++..+.+...|+.+||++..|                 |          |||++.. |++
T Consensus       283 ~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~e  362 (386)
T COG1104         283 VYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEE  362 (386)
T ss_pred             EEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHH
Confidence               01001122444556777888888888888889999876                 1          9999864 889


Q ss_pred             cHHHHHHHHHHHhhhc
Q 015283          394 KCEYLADAIIDSYHNV  409 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~~  409 (410)
                      |++++++.++++++++
T Consensus       363 ei~~~~~~l~~~i~~l  378 (386)
T COG1104         363 EIDAAAEALKEIIKRL  378 (386)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998764

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.91  E-value=3e-22  Score=190.71  Aligned_cols=328  Identities=12%  Similarity=0.077  Sum_probs=208.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|..  ..+..+ .|++.+++.+++....  .+ +..-..++++++++.+....     ...+.+  +++|++
T Consensus        29 ~~~lD~~s~~~--~~~lG~-~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~~-----~~~~~~--~~SGse   95 (375)
T PRK04260         29 KKYLDFSSGIG--VTNLGF-HPQVQQALQKQAGLIW--HS-PNLYLNSLQEEVAQKLIGDK-----DYLAFF--CNSGAE   95 (375)
T ss_pred             CEEEECCCCcc--cccCCC-CHHHHHHHHHHHHhcC--cc-cCccCCHHHHHHHHHHhcCc-----CCEEEE--cCccHH
Confidence            46789987743  222333 5779999888775421  12 11234578889998764421     223567  899999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcch-hhhhhhCCCC---------ccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNH-KNIFNDARVP---------WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~~~~~~~g~~---------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      ++..+.++.+.+.++++|++.+.+|.+. ...+...|.+         +..++..+    -.|++.+++.+.+   +..+
T Consensus        96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~dl~~l~~~l~~---~~a~  168 (375)
T PRK04260         96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FNDLNSVKALVNK---NTAA  168 (375)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCCHHHHHHhcCC---CeEE
Confidence            9999877776666778999988887653 2222222211         11111110    1378888887753   5677


Q ss_pred             EEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          184 LLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       184 ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      +++.+++|++|...+ .+.++++.++|+++|+++|+||+|.+++..   ...+.... ....+++   .||||.++ +|+
T Consensus       169 vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~---g~~~~~~~-~~~~pdi---~t~sK~l~-~G~  240 (375)
T PRK04260        169 VMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRT---GKLYAFEH-YGIEPDI---FTLAKGLA-NGV  240 (375)
T ss_pred             EEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---cchhhhHh-hCCCCCE---EEeccccc-CCc
Confidence            788899999998765 456999999999999999999999887643   22222211 1222343   38999998 799


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      |+||+++   ++++.+.+    .......+.+.+.+++.++...|+..+.    .+..++.++..+..++.+.+.+. +.
T Consensus       241 ~ig~~~~---~~~~~~~~----~~~~~~~t~~~~~~~~~aa~a~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~-~~  308 (375)
T PRK04260        241 PVGAMLA---KSSLGGAF----GYGSHGSTFGGNKLSMAAASATLDIMLT----AGFLEQALENGNYLQEQLQKALQ-DK  308 (375)
T ss_pred             ceEEEEE---cHHHHhhc----CCCCCCCCCCcCHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHh-hC
Confidence            9999855   66744443    2211222234456666666666643221    22345666666666666666665 54


Q ss_pred             CCCCCcccccCCcceeeecCC--CHH-HHHHhhhcCcEEEcCCC----eEEe-cCCCcccHHHHHHHHHHHh
Q 015283          343 KSGKDWSFILRQIGMFSFTGL--NKA-QSDNMTNKWHVYMTKDG----RISL-AGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       343 g~~~~~~~~~~~~~~~~~~~~--~~~-~~~~ll~~~gi~v~~~g----Ris~-~~~~~~~i~~~~~~l~~~l  406 (410)
                      +.   +... +..|+++|+.+  +.. +.+++.+ +||.+.|.+    ||++ ...+++++++++++|++++
T Consensus       309 ~~---~~~~-~~~g~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~  375 (375)
T PRK04260        309 ET---VTTV-RGLGYMIGIETTADLSQLVEAARD-KGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF  375 (375)
T ss_pred             CC---eeEE-eccceEEEEEecCcHHHHHHHHHh-CCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence            31   1222 23688888864  333 4555554 699998865    8887 4569999999999998764

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.91  E-value=1.8e-22  Score=191.58  Aligned_cols=319  Identities=14%  Similarity=0.023  Sum_probs=200.9

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      |+..+++.+.+++.... ......|  ..-.+++|+.+++++....    ..+.|++  |+|||++++.+  +.+.+.+|
T Consensus        10 gp~~~~~~v~~~~~~~~-~~~~~~~--~~~~~~~r~~la~l~~~~~----~~~~i~~--t~~~t~al~~~--~~~l~~~~   78 (363)
T TIGR02326        10 GPLTTSRTVKEAMLFDW-CTWDSDY--NIVVEQIRQQLLALATAEE----GYTSVLL--QGSGTFAVEAV--IGSAVPKD   78 (363)
T ss_pred             CCCCCCHHHHHHhCCCC-CCCChHH--HHHHHHHHHHHHHHhCCCC----CceEEEE--cCCCHHHHHHH--HHhcCCCC
Confidence            55556788888765533 1111112  2235677888888864431    1246888  99999999998  44446688


Q ss_pred             CEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          129 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       129 d~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      |.+++..+++.+.  ...++..|.+++.+++  ++++.+|++.+++.++.. ++..++.+++++||||+..+   +++|.
T Consensus        79 ~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~---i~~I~  152 (363)
T TIGR02326        79 GKLLVVINGAYGARIVQIAEYLGIPHHVVDT--GEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILNP---IEAVA  152 (363)
T ss_pred             CeEEEEeCChhhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccCc---HHHHH
Confidence            8877766554433  4667889999999987  345678999999998763 23455667888999999776   56888


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      ++|+++|+++++|+++ .++..+     ..+    ...+.+++++|++|.+ |++|  +||+++   +++.++++.....
T Consensus       153 ~l~~~~g~~livD~~~-~~g~~~-----~~~----~~~~~D~~~~s~~K~l~~p~G--~G~l~~---~~~~~~~~~~~~~  217 (363)
T TIGR02326       153 KLAHRHGKVTIVDAMS-SFGGIP-----IDI----AELHIDYLISSANKCIQGVPG--FGFVIA---RQAELAACKGNAR  217 (363)
T ss_pred             HHHHHcCCEEEEEccc-cccCcc-----cch----hhcCccEEEecCccccccCCc--ceEEEE---CHHHHHHhhcCCC
Confidence            8899999999999884 444211     111    1223468889999987 5556  699865   6666555421100


Q ss_pred             -----------hh---ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          286 -----------RL---ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       286 -----------~~---~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                                 ..   .......++...+.++...++.  +..  ...+++.+++++++++++.+.|+ ++|+    ...
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~--l~~--~g~~~~~~~~~~~~~~~l~~~L~-~~g~----~~~  288 (363)
T TIGR02326       218 SLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLE--LEK--EGGVAARHQRYQQNQKTLVAGMR-ALGF----EPL  288 (363)
T ss_pred             ceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHH-HcCC----eec
Confidence                       00   0001112333343433322221  100  01245677899999999999998 8874    222


Q ss_pred             cC---Cccee---eecC---CCHHHHHHhhhcCcEEEcCCC-------eEEe-cCCCcccHHHHHHHHHHHhhh
Q 015283          352 LR---QIGMF---SFTG---LNKAQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       352 ~~---~~~~~---~~~~---~~~~~~~~ll~~~gi~v~~~g-------Ris~-~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+   .++..   .+.+   ++...+.+.++++||.+.++.       ||++ +..+.++++++++.|++++.+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~~  362 (363)
T TIGR02326       289 LDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMYW  362 (363)
T ss_pred             cCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence            11   23222   2222   233344444455699998872       9985 546899999999999998864

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PLN02242 methionine gamma-lyase

Probab=99.91  E-value=2.5e-22  Score=191.93  Aligned_cols=219  Identities=15%  Similarity=0.120  Sum_probs=154.4

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-----hCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-----DAR  149 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-----~~g  149 (410)
                      +.....+|++.++++...        +..++  ++||++|+..+  +...+.+||+|+++.|.|+.+...+.     ..|
T Consensus        74 ~~Pt~~~LE~~lA~l~g~--------~~~l~--~~sG~~Ai~~a--l~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G  141 (418)
T PLN02242         74 FNPTVLNLGRQMAALEGT--------EAAYC--TASGMSAISSV--LLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCN  141 (418)
T ss_pred             CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccC
Confidence            455678999999998533        34556  89999999998  44557899999999999998876653     356


Q ss_pred             CCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC
Q 015283          150 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS  229 (410)
Q Consensus       150 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~  229 (410)
                      .+++.++.       .|++.+++.+++  ++++++++++|+||||.+.   ++++|+++|+++|++||+|++|..+.+. 
T Consensus       142 ~~~~~~d~-------~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~-  208 (418)
T PLN02242        142 ITTTFVDI-------TDLEAVKKAVVP--GKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLS-  208 (418)
T ss_pred             ceEEEcCC-------CCHHHHHHhcCc--CCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCC-
Confidence            66655543       278999888864  2477888899999999966   5778888899999999999999766532 


Q ss_pred             CCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283          230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~  308 (410)
                            .. .    ...+++++|+||.++.+|+++ ||++   .++++++++.......  ....+++...+.++...+.
T Consensus       209 ------~~-~----~g~divv~S~SK~l~g~g~~~gG~iv---~~~~li~~l~~~~~~~--~~~~g~~~~~~~A~l~~~~  272 (418)
T PLN02242        209 ------PA-R----LGADVVVHSISKFISGGADIIAGAVC---GPAELVNSMMDLHHGA--LMLLGPTMNPKVAFELSER  272 (418)
T ss_pred             ------HH-H----cCCcEEEEeCccccCCCCCceEEEEE---cCHHHHHHHHHHhhhh--hhccCCCCCHHHHHHHHcC
Confidence                  11 1    135789999999999899885 7753   4777666655432210  1122333334444443333


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ...        +....+++++++..+.+.|+ +.+
T Consensus       273 l~t--------l~~r~~~~~~~a~~la~~L~-~~~  298 (418)
T PLN02242        273 LPH--------LSLRMKEHCRRAMEYAKRMK-ELG  298 (418)
T ss_pred             CCc--------HHHHHHHHHHHHHHHHHHHH-hCC
Confidence            222        23455678889999999998 775

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.91  E-value=1.1e-22  Score=194.27  Aligned_cols=320  Identities=14%  Similarity=0.064  Sum_probs=202.4

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCCCccCcC---------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGENKEYLP---------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      |+|..+..++++.+.+++.+.+...  ..++.         ..-..++|+.+++++..      ++++|++  ++|+|++
T Consensus         2 yld~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~i~~--t~~~t~a   71 (379)
T TIGR03402         2 YLDNNATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEEAREQVAKLLGA------EPDEIIF--TSGGTES   71 (379)
T ss_pred             cCCCcCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCcHHHH
Confidence            4677777777899999988776421  11111         11245777788887643      2678999  9999999


Q ss_pred             HHHHHHHHHH-hCCCCEEEEcCCCCcchhhh---hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          115 LRLAAALIER-YFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       115 ~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      +.++...+.. ..+||.|++...+|+.+...   ++..|.+++.++.  .+++.+|++++++.+++   ++.++++++++
T Consensus        72 ~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~--~~~g~~~~~~l~~~i~~---~~~lv~i~~~~  146 (379)
T TIGR03402        72 DNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPV--DEEGRLDLEELRAAITD---DTALVSVMWAN  146 (379)
T ss_pred             HHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEcc--CCCCcCCHHHHHHhcCC---CcEEEEEEccc
Confidence            9987543322 24678999999888776543   3456889888887  34567899999999875   67888889999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||||.+++.   ++|.++|+++|+++++|+++.. +..+.+         ....+.++++.|.+|.+|++|  +|++++ 
T Consensus       147 n~tG~~~~~---~~I~~l~~~~g~~vivD~~~~~-g~~~~~---------~~~~~~D~~~~s~~K~~gp~G--~g~l~v-  210 (379)
T TIGR03402       147 NETGTIFPI---EEIGEIAKERGALFHTDAVQAV-GKIPID---------LKEMNIDMLSLSGHKLHGPKG--VGALYI-  210 (379)
T ss_pred             CCeeecccH---HHHHHHHHHcCCEEEEECcccc-cccccC---------cccCCCCEEEEcHHHcCCCCc--eEEEEE-
Confidence            999998875   4677789999999999999653 321111         112235677788889888777  577754 


Q ss_pred             eCCchhHHHHHHHHH-hh-ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCC
Q 015283          271 CSSSDLAARVKSQLK-RL-ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGK  346 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~  346 (410)
                        +++.  .+..... .. ...... +++..+..++...++   +.   .+.+++..++.+++++++.+.|+ + +..  
T Consensus       211 --~~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~---~~---~~~~~~~~~~~~~l~~~l~~~l~-~~~~~--  277 (379)
T TIGR03402       211 --RKGT--RFRPLLRGGHQERGRRAGTENVPGIVGLGKAAE---LA---TEHLEEENTRVRALRDRLEAGLL-ARIPD--  277 (379)
T ss_pred             --CCCC--CCCCcccCCccCCCcCCCCccHHHHHHHHHHHH---HH---HHhHHHHHHHHHHHHHHHHHHHH-hhCCC--
Confidence              3331  1111110 00 000111 222222222222221   11   22345666788888888888887 5 321  


Q ss_pred             CcccccCC----ccee-ee-cCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCc
Q 015283          347 DWSFILRQ----IGMF-SF-TGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSL  392 (410)
Q Consensus       347 ~~~~~~~~----~~~~-~~-~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~  392 (410)
                       +.+..+.    .+.. ++ .+.+.+.+...++++||.+.+|                         |  |+|+.. .|+
T Consensus       278 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~  356 (379)
T TIGR03402       278 -ARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTE  356 (379)
T ss_pred             -EEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCH
Confidence             2222211    1222 23 3456665555666789998642                         3  999775 388


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      +||+++++.|+++++.
T Consensus       357 ~di~~~~~~l~~~~~~  372 (379)
T TIGR03402       357 EDIDYVLEVLPPIIAR  372 (379)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998765

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.91  E-value=8.4e-23  Score=194.76  Aligned_cols=318  Identities=15%  Similarity=0.117  Sum_probs=200.4

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCCC--c----cCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGEN--K----EYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~--~----~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      ++|..+.+++++.+.+++.+.+.....  +    .+.  -.....++|+.+++++...     +++++++  ++|+++++
T Consensus         2 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~a~   74 (373)
T cd06453           2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAP-----SPDEIIF--TRNTTEAI   74 (373)
T ss_pred             cccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCCHHHHH
Confidence            356667777789999998776522110  0    110  1234567889999886432     1568888  99999999


Q ss_pred             HHHHHHHHHhC---CCCEEEEcCCCCcch----hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283          116 RLAAALIERYF---PGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC  188 (410)
Q Consensus       116 ~~~~~~~~~~~---~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~  188 (410)
                      .++...  ...   +||+|++++++|++.    ....+..|++++.++.  .+++.+|++++++.+.+   ++.++++++
T Consensus        75 ~~~~~~--l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~---~~~~v~~~~  147 (373)
T cd06453          75 NLVAYG--LGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPV--DDDGQLDLEALEKLLTE---RTKLVAVTH  147 (373)
T ss_pred             HHHHHH--hhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeec--CCCCCcCHHHHHHHhcC---CceEEEEeC
Confidence            987433  344   899999999999874    3344577999999987  35567999999999875   677778899


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      |+||||.+.+.   ++|+++|+++|++|++|++|...... .     .+    .....++++.|++|.++.  .++|+++
T Consensus       148 ~~~~tG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~-~-----~~----~~~~~d~~~~s~~K~~~~--~g~g~~~  212 (373)
T cd06453         148 VSNVLGTINPV---KEIGEIAHEAGVPVLVDGAQSAGHMP-V-----DV----QDLGCDFLAFSGHKMLGP--TGIGVLY  212 (373)
T ss_pred             cccccCCcCCH---HHHHHHHHHcCCEEEEEhhhhcCcee-e-----ec----cccCCCEEEeccccccCC--CCcEEEE
Confidence            99999997764   57777799999999999997633211 0     11    111345677899999985  5579875


Q ss_pred             EEeCCchhHHHHHHHHHhh----------------ccCcc-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVKSQLKRL----------------ARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~----------------~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      +   +++.++.+.......                ..... .+++..+..++...++.  +.   ...+++.+++.++++
T Consensus       213 ~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~--l~---~~g~~~~~~~~~~~~  284 (373)
T cd06453         213 G---KEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDY--LE---KIGMEAIAAHEHELT  284 (373)
T ss_pred             E---chHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHH--HH---HcCHHHHHHHHHHHH
Confidence            5   667555543321100                00001 12332222222222221  00   112356677777888


Q ss_pred             HHHHHHhhhccCCCCCccccc---CCcceeee--cCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC-
Q 015283          332 QKLFDSLSAKDKSGKDWSFIL---RQIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG-  389 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~---~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~-  389 (410)
                      +++.+.|+ +++.   +++..   ...+++.+  .+.+.+.+.+.++++||.+.++              +  |+|+.. 
T Consensus       285 ~~l~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~  360 (373)
T cd06453         285 AYALERLS-EIPG---VRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLY  360 (373)
T ss_pred             HHHHHHHh-cCCC---eEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCC
Confidence            88999888 7742   23321   12333322  2234444444445579988642              2  999874 


Q ss_pred             CCcccHHHHHHHH
Q 015283          390 LSLAKCEYLADAI  402 (410)
Q Consensus       390 ~~~~~i~~~~~~l  402 (410)
                      .|.++++++++.|
T Consensus       361 ~t~~di~~~~~~l  373 (373)
T cd06453         361 NTEEEIDALVEAL  373 (373)
T ss_pred             CCHHHHHHHHhhC
Confidence            3889999998864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.91  E-value=3.9e-22  Score=192.45  Aligned_cols=343  Identities=9%  Similarity=0.014  Sum_probs=207.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++.... +.+.+..+.+. ..++++.+....+... .+.+.+  +.+|++
T Consensus        41 ~~~lD~~~g~~~~~lGh~--~~~i~~a~~~~~~~~~-~~~~~~~~~~~-~~~la~~l~~~~~~~~-~~~~~f--~~sGse  113 (425)
T PRK08088         41 REYLDFAGGIAVLNTGHL--HPKVVAAVEAQLKKLS-HTCFQVLAYEP-YLELCEKMNQKVPGDF-AKKTLL--VTTGSE  113 (425)
T ss_pred             CEEEEcCCchhhcCCCCC--CHHHHHHHHHHHhhCC-CccccccCCHH-HHHHHHHHHHhCCCCC-CCEEEE--eCCcHH
Confidence            467899887652334544  6888888888875532 12222222332 2355555444322221 246777  889999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcc--------------c--eeeecCCCccc--ChhhHHHHHh
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS--------------E--YRYYDPKTVGL--DFEGMIADIK  175 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~--------------~--v~~~~~~~~~~--d~~~l~~~i~  175 (410)
                      |++.+.++...+.+..+|+..+++|.+....+...+....              .  +|.. ..+...  +++.+++.+.
T Consensus       114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~l~  192 (425)
T PRK08088        114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCP-LHGVSEDDAIASIERIFK  192 (425)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcc-ccCccHHHHHHHHHHHHH
Confidence            9999988877766567788889999877644443222111              0  1110 010101  1456777775


Q ss_pred             c--CCCCc-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283          176 A--APGGS-FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS  252 (410)
Q Consensus       176 ~--~~~~~-~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  252 (410)
                      .  .++.. .+++-+..++++...++.+.+++|.++|++||+++|+||+|.+++..   ...+.+.    ....+..+.|
T Consensus       193 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~---g~~~~~~----~~~~~pdi~s  265 (425)
T PRK08088        193 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRT---GTLFAME----QMGVAADLTT  265 (425)
T ss_pred             hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---cchhHHh----hcCCCCCEEE
Confidence            2  12233 44444445777777889999999999999999999999999987643   2222221    1123344789


Q ss_pred             ccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283          253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ  332 (410)
Q Consensus       253 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  332 (410)
                      |||.++ +|+|+||++.   ++++.+.+.    ......+...+.+.+.++...|+....    .+++++.++..+..++
T Consensus       266 ~sK~l~-~G~rig~v~~---~~~~~~~~~----~~~~~~t~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~  333 (425)
T PRK08088        266 FAKSIA-GGFPLAGVTG---RAEVMDAIA----PGGLGGTYAGNPIACAAALAVLKVFEQ----ENLLQKANALGEKLKD  333 (425)
T ss_pred             Eecccc-CCCcceeeEe---cHHHHhhcC----CCCCCCCCCcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHH
Confidence            999998 8999999855   777555443    223333445667777877777764322    2334444444444444


Q ss_pred             HHHHHhhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCCC------eEEecC-CCc
Q 015283          333 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG------RISLAG-LSL  392 (410)
Q Consensus       333 ~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~g------Ris~~~-~~~  392 (410)
                      .+.+... ..+.   +.... ..|+++|+.+             ...+..++++ .||.+.|++      ||+++. .++
T Consensus       334 ~l~~l~~-~~~~---~~~v~-g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~iRl~~~~~~t~  407 (425)
T PRK08088        334 GLLAIAE-KHPE---IGDVR-GLGAMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPYYNVLRILVPLTIED  407 (425)
T ss_pred             HHHHHHH-hCCC---eEEEe-ccceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCCCCEEEEECCCCcCH
Confidence            4444333 3331   11122 2277888754             1223445554 698887753      999874 589


Q ss_pred             ccHHHHHHHHHHHhhhc
Q 015283          393 AKCEYLADAIIDSYHNV  409 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++|++++.++
T Consensus       408 ~ei~~~i~~l~~~l~~~  424 (425)
T PRK08088        408 AQIRQGLEIIAQCFDEA  424 (425)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998765

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.91  E-value=3.4e-22  Score=190.37  Aligned_cols=330  Identities=12%  Similarity=0.111  Sum_probs=196.1

Q ss_pred             eeeeeeeeecCCCcccccHHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           37 LNLGVGAYRTEELQPYVLDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      +||+..+||....+    |.++++..++++.      .....|+...++.+|++++++++..       ++.+++   ++
T Consensus         1 ~~f~s~dyLgl~~~----~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~al~~---~s   66 (392)
T PLN03227          1 LNFATHDFLSTSSS----PTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ESAILY---SD   66 (392)
T ss_pred             CCCcCcCccCCCCC----HHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEe---cC
Confidence            46777777655554    5566555555422      1123476667889999999999744       355666   45


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC--------CCCcE
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--------PGGSF  182 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--------~~~~~  182 (410)
                      |+.+...+  +...+.+||.|+++++.|.++...+...+.+++.++..+.    -+++.+.+.+...        .++++
T Consensus        67 G~~a~~~~--i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~  140 (392)
T PLN03227         67 GASTTSST--VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRR  140 (392)
T ss_pred             cHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcE
Confidence            54444454  3445789999999999999998877766777666665211    1334444444321        13577


Q ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh--hcCCcEEEEeccccccccc
Q 015283          183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~~~~  260 (410)
                      ++++.+++||+|.+.+   ++++.++|++||+++|+||+|. ++..+.... +....+.  +..+.++++.|+||.+|  
T Consensus       141 ~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~-g~~~~~g~~p~~~~Div~~slsk~~g--  213 (392)
T PLN03227        141 FLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLENAFG--  213 (392)
T ss_pred             EEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCCC-cHHHHcCCCCCCCceEEEeechhhhh--
Confidence            8888999999999887   6677888999999999999986 442211111 1111111  12235888999999876  


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                       +..|++.   .++++++.+...   ....+++ +.+...+.++...+...      . ..++.+++++++.+++.+.|+
T Consensus       214 -~~gg~v~---~~~~~~~~~~~~---~~~~~~~~~~~p~~~~aa~~al~~~------~-~~~~~~~~l~~~~~~l~~~L~  279 (392)
T PLN03227        214 -SVGGMTV---GSEEVVDHQRLS---GSGYCFSASAPPFLAKADATATAGE------L-AGPQLLNRLHDSIANLYSTLT  279 (392)
T ss_pred             -ccCcEEe---cCHHHHHHHHHh---CcCccccCCCCHHHHHHHHHHHHHH------h-cCHHHHHHHHHHHHHHHHHHH
Confidence             4447753   366755443321   1111223 22333333332222211      0 013566778888888888887


Q ss_pred             hccCCCC------CcccccCCcceeeecCC-C-------------HHHHHHhhhcCcEEEcCC-------------C--e
Q 015283          340 AKDKSGK------DWSFILRQIGMFSFTGL-N-------------KAQSDNMTNKWHVYMTKD-------------G--R  384 (410)
Q Consensus       340 ~~~g~~~------~~~~~~~~~~~~~~~~~-~-------------~~~~~~ll~~~gi~v~~~-------------g--R  384 (410)
                       +.+.+.      .........++++.+.+ +             .++.+++++ +|+.+.+.             .  |
T Consensus       280 -~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~~P~~~iR  357 (392)
T PLN03227        280 -NSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLS-EGVAVVSTGGHVKKFLQLVPPPCLR  357 (392)
T ss_pred             -hcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHH-CCCEEEecccccCCcCCCCCCceEE
Confidence             544210      00000111222322222 1             133455555 59887531             1  8


Q ss_pred             EEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          385 ISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       385 is~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++.. +|++|++++++.|++++.++
T Consensus       358 ~~~~~~~t~eei~~~~~~l~~~~~~~  383 (392)
T PLN03227        358 VVANASHTREDIDKLLTVLGEAVEAI  383 (392)
T ss_pred             EEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            88664 59999999999999998653

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.91  E-value=3.5e-22  Score=190.44  Aligned_cols=319  Identities=11%  Similarity=0.058  Sum_probs=197.0

Q ss_pred             cHHHHHHHHHhhccC--CCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--CCC
Q 015283           54 LDVVKKAENLMLERG--ENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG  128 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~--~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~~g  128 (410)
                      .|.+.+++.+.+...  ....|+. ..-..++++.+++++.    .  ++.++++  ++||++++..+...+...  .+|
T Consensus        33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~--~~~~~~~--~~ggt~a~~~a~~~~~~~~~~~~  104 (371)
T PRK13520         33 HPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLH----L--PDAYGYI--TSGGTEANIQAVRAARNLAKAEK  104 (371)
T ss_pred             hHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhC----C--CCCCeEE--ecCcHHHHHHHHHHHHhhccCCC
Confidence            688888887776432  1111211 0111456666666643    2  1446777  899999998875544333  257


Q ss_pred             CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 015283          129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV  208 (410)
Q Consensus       129 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~  208 (410)
                      |+|++++++|..+...++..|.+++.++.  ++++.+|++.+++.+.+   ++..++.+.++|+||.+.+   +++|.++
T Consensus       105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~---l~~I~~l  176 (371)
T PRK13520        105 PNIVVPESAHFSFDKAADMLGVELRRAPL--DDDYRVDVKAVEDLIDD---NTIGIVGIAGTTELGQVDP---IPELSKI  176 (371)
T ss_pred             ceEEecCcchHHHHHHHHHcCceEEEecC--CCCCcCCHHHHHHHHhh---CCEEEEEEcCCcCCcccCC---HHHHHHH
Confidence            99999999999998888889999988887  34567899999999975   4555555678899999765   6677777


Q ss_pred             HHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283          209 IQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA  288 (410)
Q Consensus       209 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~  288 (410)
                      |+++|+++++|++|..+..+ .......+.  ........+..|.+| ++.+|.++|+++  ..+++.++.+... ....
T Consensus       177 ~~~~g~~livD~a~~~~~~~-~~~~~~~~~--~~~~~vd~~~~s~~K-~~~a~~~~G~~~--~~~~~~~~~l~~~-~~~~  249 (371)
T PRK13520        177 ALENGIFLHVDAAFGGFVIP-FLDDPPNFD--FSLPGVDSITIDPHK-MGLAPIPAGGIL--FRDESYLDALAVD-TPYL  249 (371)
T ss_pred             HHHcCCCEEEEecchhHHHH-hhcCCCCcc--ccCCCCceEEECCcc-ccCccCCceEEE--EcCHHHHHhhccc-Cccc
Confidence            99999999999998765421 001100000  011123445567778 455678899874  4455544443210 0010


Q ss_pred             cC-----cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc-cccCCcceeeecC
Q 015283          289 RP-----MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-FILRQIGMFSFTG  362 (410)
Q Consensus       289 ~~-----~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~~~  362 (410)
                      ..     ...+.+.....++...|+.-     ..+.+++.+++..++++++.+.|+ ++|+    + +..+..+ ++.+.
T Consensus       250 ~~~~~~~~~gt~~~~~~~~~~~al~~l-----~~~g~~~~~~~~~~~~~~l~~~L~-~~g~----~~~~~~~~~-~v~~~  318 (371)
T PRK13520        250 TSKKQATLTGTRSGAGVAATYAVMKYL-----GREGYRKVVERCMENTRWLAEELK-ERGF----EPVIEPVLN-IVAFD  318 (371)
T ss_pred             cCCCCcceEeeccChHHHHHHHHHhhh-----cHhHHHHHHHHHHHHHHHHHHHHH-hCCC----EEecCCCce-EEEEe
Confidence            00     00011112222222223211     022346777888889999999998 7763    4 3444444 33333


Q ss_pred             C-CHH-HHHHhhhcCcEEEcCCC-----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          363 L-NKA-QSDNMTNKWHVYMTKDG-----RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       363 ~-~~~-~~~~ll~~~gi~v~~~g-----Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      + +.+ +..+|.+ +||.+.+++     |+|+.. .|+++++++++.|+++++
T Consensus       319 ~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        319 DPNPDEVREKLRE-RGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             cCCHHHHHHHHHH-CCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence            3 334 4455554 599987753     998653 389999999999998875

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.90  E-value=1.6e-21  Score=187.59  Aligned_cols=329  Identities=15%  Similarity=0.104  Sum_probs=202.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCC-----ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GEN-----KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~-----~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .++++|+.+.|+....    +|++.+++.++++. +..     ..+....-..++++.+++++..        +..++  
T Consensus        45 ~~~~~~~sn~ylgl~~----~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~--  110 (406)
T PRK13393         45 REVTVWCSNDYLGMGQ----HPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--------EAALL--  110 (406)
T ss_pred             ccEEEeecccccCCCC----CHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--------CcEEE--
Confidence            4689999998864444    46777777766643 110     1111122356788888888532        23444  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-CCCcEEEEe
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLH  186 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~~ii~  186 (410)
                      .++|++++..+...+....+||.|++....|+.....+...|.++..++.       .|++.+++.++.. +++++++++
T Consensus       111 ~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~  183 (406)
T PRK13393        111 FTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAF  183 (406)
T ss_pred             eCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEE
Confidence            46677788887554433337887777778888777777777777666654       3677777777543 235677888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      ++++|++|.+.+   +++|.++|+++|+++|+||+|....+++.. ..+ . ...+. ...+++++||||.+|++|   |
T Consensus       184 ~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g~-~-~~~~~~~~~~i~~~tlsKa~g~~G---G  254 (406)
T PRK13393        184 ESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GGI-A-EREGLADRLTIIEGTLAKAFGVMG---G  254 (406)
T ss_pred             cCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCC-Cch-h-hhcCCCCCCeEEEEeCchhhcccC---c
Confidence            999999999776   667777799999999999997633322111 111 1 11111 123678899999999877   8


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |++   .++++++.+......+.  .+...+..++.++...|+..      .+. ...+.+++++++++.+.|+ +.+  
T Consensus       255 ~~~---~~~~~~~~l~~~~~~~~--~t~~~~p~~~aa~~aaL~~~------~~~-~~~~~~~~~~~~~l~~~L~-~~g--  319 (406)
T PRK13393        255 YIT---GSAALCDFIRSFASGFI--FTTSLPPAVAAGALASVRHL------KAS-SAERERHQDRVARLRARLD-KAG--  319 (406)
T ss_pred             eee---CCHHHHHHHHHhCcCce--ecCccCHHHHHHHHHHHHHH------hhC-HHHHHHHHHHHHHHHHHHH-HcC--
Confidence            863   37775555443211111  12223333333333333211      011 1234567788889999998 776  


Q ss_pred             CCcccccCCcceeee-cCCC---HHHHHHhhhcCcEEEcC--------C-C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          346 KDWSFILRQIGMFSF-TGLN---KAQSDNMTNKWHVYMTK--------D-G--RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~~~~~~~~~~~~~-~~~~---~~~~~~ll~~~gi~v~~--------~-g--Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                        +...++.+.++.+ ++..   .++..++++++||.+.+        + +  ||++.. .+++|++++++.|++++.++
T Consensus       320 --~~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        320 --IPHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             --CCcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence              3444455444322 2221   23455666656999864        2 2  888763 48999999999999987653

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.90  E-value=1.2e-21  Score=181.75  Aligned_cols=324  Identities=15%  Similarity=0.135  Sum_probs=215.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      .+++||++++||....+|.+-+.+.+++.+.-..  +...-++...-+.+|.+.+|+|+ +.      +.-+++   ++|
T Consensus        39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~------e~al~f---~SG  108 (388)
T COG0156          39 RKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GA------EAALLF---SSG  108 (388)
T ss_pred             ceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------CcEEEE---ccc
Confidence            5789999999986666643333344444432111  11122444455678999999995 32      345666   666


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC---CCcEEEEeCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGC  188 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~---~~~~~ii~~~  188 (410)
                      -.|+..+  +...+.+||-|+..+-.+.+..+.++..+++.+.+.+       .|++.|++++.+.+   .+.++|++..
T Consensus       109 y~AN~~~--i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivteg  179 (388)
T COG0156         109 FVANLGL--LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEG  179 (388)
T ss_pred             chhHHHH--HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEec
Confidence            6666665  3444668999999999999999999999999999887       48899999987631   1356677666


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH-HHh-hcCCcEEEEecccccccccCCCcce
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LFA-TRGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~-~~~-~~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      .-.-.|.   .++|.+|++++++|+.++++||+|+-..+++...   ++. .+. .....+|.++||||++|..|   ||
T Consensus       180 VfSMdGd---iApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~Gr---G~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~  250 (388)
T COG0156         180 VFSMDGD---IAPLPELVELAEKYGALLYVDEAHAVGVLGPNGR---GLAEHFGLEPEEVDIIVGTLGKALGSSG---GY  250 (388)
T ss_pred             cccCCCC---cCCHHHHHHHHHHhCcEEEEEccccccccCCCCc---cHHHHhCCCCccceEEEEEchhhhcccC---ce
Confidence            6666666   6778888888999999999999977666542211   222 221 22345899999999999776   78


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH--HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI--VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                         ++++..+++.++...+.+++++. -||..+..+  +...+.+.          ...+++++++.+.+...++ ..+ 
T Consensus       251 ---v~g~~~~~d~L~~~ar~~ifSta-lpP~~aaa~~~al~~l~~~----------~~~r~~L~~~~~~~~~~~~-~~~-  314 (388)
T COG0156         251 ---IAGSAALIDYLRNRARPFIFSTA-LPPAVAAAALAALRILEEG----------PERRERLQELAAFFRSLLK-ALG-  314 (388)
T ss_pred             ---eeCcHHHHHHHHHhCCceeccCC-CCHHHHHHHHHHHHHHHhC----------HHHHHHHHHHHHHHHHHHH-hcC-
Confidence               45588877777776665555433 233322111  23333322          4677888888888886666 655 


Q ss_pred             CCCcccccCCccee-eecCC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHH
Q 015283          345 GKDWSFILRQIGMF-SFTGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       345 ~~~~~~~~~~~~~~-~~~~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                         +...+..+.+. +.++.   ..+....++++ ||++.+-       |    |+++.. .|+++|+.+++.|.++
T Consensus       315 ---~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         315 ---LVLLPSESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             ---CccCCCCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence               23333333333 33454   23456788776 9998653       3    888764 5999999999998875

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.90  E-value=1.5e-21  Score=184.15  Aligned_cols=315  Identities=17%  Similarity=0.117  Sum_probs=197.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++||-. |.. ..-|.+++++.+++++.++.+.     |.   +.+++++++.+++.+.+|    .+++++  ++|+|.
T Consensus         8 ~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~--~~g~t~   71 (363)
T TIGR01437         8 KKVINAS-GKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVI--VSSASA   71 (363)
T ss_pred             ceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEE--EcCHHH
Confidence            3566654 433 4556666789999999887532     32   244666666666655554    346777  999999


Q ss_pred             HHHHHHHHHHHhCCCC---------------EEEEcCCCCcch----hhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283          114 SLRLAAALIERYFPGA---------------KVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI  174 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd---------------~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i  174 (410)
                      ++.++  +...+.+||               +|+++.|.|..|    ...+...|++++.++.    .+.+|++++++.+
T Consensus        72 al~~a--l~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai  145 (363)
T TIGR01437        72 GIAQS--VAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAI  145 (363)
T ss_pred             HHHHH--HHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhc
Confidence            99998  444477887               999999888766    4566778999988865    2458999999999


Q ss_pred             hcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283          175 KAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY  253 (410)
Q Consensus       175 ~~~~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  253 (410)
                      .+   ++++++ +++|+||+|.+.+.   ++|+++|++||+++++|++|.. .          +...... +.++++.|+
T Consensus       146 ~~---~t~ai~~v~~~~~~~g~~~~~---~~i~~~a~~~gi~vivD~a~~~-~----------~~~~~~~-g~D~~~~S~  207 (363)
T TIGR01437       146 TE---KTAAILYIKSHHCVQKSMLSV---EDAAQVAQEHNLPLIVDAAAEE-D----------LQKYYRL-GADLVIYSG  207 (363)
T ss_pred             Ch---hceEEEEEecCCCCcCCcCCH---HHHHHHHHHcCCeEEEECCCCC-c----------hHHHHHc-CCCEEEEeC
Confidence            75   455444 67889999997765   5678889999999999999751 1          1111112 356788999


Q ss_pred             cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283          254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ  332 (410)
Q Consensus       254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  332 (410)
                      +|.+  +|++.|+++.   +++.++.+........+.... .....++.++...+.+.         ..+..+...++++
T Consensus       208 ~K~l--~gp~~G~l~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~---------~~~~~~~~~~~~~  273 (363)
T TIGR01437       208 AKAI--EGPTSGLVLG---KKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLST---------GKESGAEMVAKLT  273 (363)
T ss_pred             Cccc--CCCceEEEEE---cHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHcc---------CcccHHHHHHHHH
Confidence            9976  5788899744   666555543211111111101 11122333333332221         1122233334566


Q ss_pred             HHHHHhhhccCCCCCccccc--CCcce------eeec----CCCHHHHHHhhhcCc--EEEcC----CC--eEEecCCCc
Q 015283          333 KLFDSLSAKDKSGKDWSFIL--RQIGM------FSFT----GLNKAQSDNMTNKWH--VYMTK----DG--RISLAGLSL  392 (410)
Q Consensus       333 ~l~~~l~~~~g~~~~~~~~~--~~~~~------~~~~----~~~~~~~~~ll~~~g--i~v~~----~g--Ris~~~~~~  392 (410)
                      .+.+.|. +++.   +....  +..+.      ..+-    +.+...+.+.|++.|  |.+++    .|  |+++..+++
T Consensus       274 ~l~~~L~-~i~g---~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~  349 (363)
T TIGR01437       274 PFIEALN-TLKG---VSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTG  349 (363)
T ss_pred             HHHHHHh-cCCC---eEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCH
Confidence            7888887 6631   33321  11111      1121    446656555555445  88774    34  777777789


Q ss_pred             ccHHHHHHHHHHHh
Q 015283          393 AKCEYLADAIIDSY  406 (410)
Q Consensus       393 ~~i~~~~~~l~~~l  406 (410)
                      +|++.++++|++++
T Consensus       350 ~e~~~~~~~l~~~~  363 (363)
T TIGR01437       350 GQLDIIVERIREIV  363 (363)
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999998864

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.90  E-value=1.9e-21  Score=188.00  Aligned_cols=323  Identities=17%  Similarity=0.203  Sum_probs=193.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC-----ccCc-CCcccHHH----HHHHHHHhcCCCCCcccCCce
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-----KEYL-PIEGLAAF----NKVTAELLFGADNSVLKEQRV  103 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~~y~-~~~g~~~l----r~aia~~~~~~~~~~~~~~~i  103 (410)
                      ...++|..+..      + +++.+++++...+.....     ..|. ...-...+    |+.+++++...      ..+|
T Consensus        25 ~~~~~l~~~~n------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~------~~~i   91 (416)
T PRK00011         25 EEHIELIASEN------F-VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAE------YANV   91 (416)
T ss_pred             hcCeeeecccC------c-CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC------ceee
Confidence            46789997764      3 479999988665421110     1111 11112223    23455554322      3445


Q ss_pred             EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-----hhhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283          104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      ++   .+|+.++..++  ...+.+||+|+++.|+|..+...     +...|++++.++.. .+++.+|++++++.+++  
T Consensus        92 ~~---~sgt~al~~~l--~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~--  163 (416)
T PRK00011         92 QP---HSGSQANAAVY--FALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVD-EETGLIDYDEVEKLALE--  163 (416)
T ss_pred             ec---CCchHHHHHHH--HHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcC-cccCCcCHHHHHHHHHh--
Confidence            44   45788888763  33467999999999999865322     23345677777763 24578999999999875  


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC-CCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                      .+++++++++++||  .   ..++++|.++|+++|+++|+|++|.. +...+.  ....    ..  ..+++++|+||.+
T Consensus       164 ~~~k~v~~~~~~~~--~---~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~--~~~~----~~--~~di~~~S~~K~l  230 (416)
T PRK00011        164 HKPKLIIAGASAYS--R---PIDFKRFREIADEVGAYLMVDMAHIAGLVAAGV--HPSP----VP--HADVVTTTTHKTL  230 (416)
T ss_pred             cCCCEEEECCCcCC--C---ccCHHHHHHHHHHcCCEEEEECcchhcccccCc--cCCC----CC--CCcEEEecCCcCC
Confidence            24555665555544  3   34578888899999999999999742 221100  0001    11  2457799999976


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                        +|.|.||+  ++.++++.+++....    ... ..++......++...+.  ..   ..+.+++.+++++++++++.+
T Consensus       231 --~g~~gg~i--~~~~~~~~~~l~~~~----~~~~~~~~~~~~~aa~~~a~~--~~---~~~~~~~~~~~~~~~~~~l~~  297 (416)
T PRK00011        231 --RGPRGGLI--LTNDEELAKKINSAV----FPGIQGGPLMHVIAAKAVAFK--EA---LEPEFKEYAQQVVKNAKALAE  297 (416)
T ss_pred             --CCCCceEE--EeCCHHHHHHHHHHh----CccccCCccHHHHHHHHHHHH--HH---HhhhHHHHHHHHHHHHHHHHH
Confidence              68899997  444567666554422    211 11222212122111111  11   122346778889999999999


Q ss_pred             HhhhccCCCCCccccc-CCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------------C-eEEe-----cCCC
Q 015283          337 SLSAKDKSGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISL-----AGLS  391 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------------g-Ris~-----~~~~  391 (410)
                      .|+ +.|+    ++.. ...++++|+.+     +.+.+.+.++++||.+..+             + |++.     .+++
T Consensus       298 ~L~-~~g~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t  372 (416)
T PRK00011        298 ALA-ERGF----RVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFK  372 (416)
T ss_pred             HHH-hCCC----eeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcC
Confidence            998 8773    3332 12236666644     3445555666679998621             2 7742     1357


Q ss_pred             cccHHHHHHHHHHHhhh
Q 015283          392 LAKCEYLADAIIDSYHN  408 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++.|++++..
T Consensus       373 ~~di~~l~~~l~~~~~~  389 (416)
T PRK00011        373 EAEMKEIAELIADVLDN  389 (416)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            89999999999998654

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.90  E-value=2.9e-22  Score=189.05  Aligned_cols=299  Identities=13%  Similarity=0.032  Sum_probs=201.1

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--C-----
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--F-----  126 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~-----  126 (410)
                      +..+.+.+....+... ..|....+..++++++++++.+..|.+.+++++++  |+|||+++.++...+..-  .     
T Consensus        12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~   88 (345)
T cd06450          12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVF--TSGGSESNLLALLAARDRARKRLKAG   88 (345)
T ss_pred             HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEE--eCChhHHHHHHHHHHHHHhhhhhhcc
Confidence            4555566666655443 55887888999999999998777776534567888  999999999885544321  1     


Q ss_pred             ---C--CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCC
Q 015283          127 ---P--GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPT  198 (410)
Q Consensus       127 ---~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~  198 (410)
                         +  ++.|++++++|..+...++..|.+++.+++.  +++.+|++.+++.+.+   ...++.++++++|+||||.+  
T Consensus        89 ~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~--  164 (345)
T cd06450          89 GGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVD--EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI--  164 (345)
T ss_pred             cccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeC--CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC--
Confidence               2  3478888999999988888889999999883  3457999999999864   12256677778999999995  


Q ss_pred             HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHH
Q 015283          199 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA  278 (410)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~  278 (410)
                       .++++|+++|+++|+++++|++|..+... .+... .  ......+.+.+..|++|.++ ++.+.|++++   +     
T Consensus       165 -~~~~~i~~~~~~~~~~l~vD~a~~~~~~~-~~~~~-~--~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~---~-----  230 (345)
T cd06450         165 -DPLEEIADLAEKYDLWLHVDAAYGGFLLP-FPEPR-H--LDFGIERVDSISVDPHKYGL-VPLGCSAVLV---R-----  230 (345)
T ss_pred             -CCHHHHHHHHHHhCCeEEEechhhHHHhh-ChhhH-H--HhcCccccCEEEEchhHhhC-CCcchHHHHH---H-----
Confidence             56788888899999999999998876642 11111 0  01111224566779999775 5577888622   1     


Q ss_pred             HHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc-cCCcce
Q 015283          279 RVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI-LRQIGM  357 (410)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~  357 (410)
                                        ...+.++...+..        +.+++.+++..++++++.+.|+ +++.   +.+. .+..++
T Consensus       231 ------------------~~~~~~~l~~l~~--------~g~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~~~~~i  280 (345)
T cd06450         231 ------------------ALKLWATLRRFGR--------DGYGEHIDRIVDLAKYLAELIR-ADPG---FELLGEPNLSL  280 (345)
T ss_pred             ------------------HHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHh-cCCC---eEEecCCceeE
Confidence                              2223333333332        2345777888889999999888 7642   3332 345555


Q ss_pred             eeec--C-----CC-HHHHHHhhhcCcEEEcCC------C--eEEecC-C-CcccHHHHHHHHHH
Q 015283          358 FSFT--G-----LN-KAQSDNMTNKWHVYMTKD------G--RISLAG-L-SLAKCEYLADAIID  404 (410)
Q Consensus       358 ~~~~--~-----~~-~~~~~~ll~~~gi~v~~~------g--Ris~~~-~-~~~~i~~~~~~l~~  404 (410)
                      +.|.  +     .. .++.+++. ++|+.+.++      +  |+++.. . ++++++++++.|++
T Consensus       281 v~f~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         281 VCFRLKPSVKLDELNYDLSDRLN-ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             EEEEECCcchhhHHHHHHHHHHH-hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence            5443  2     12 23345554 455443321      2  999875 3 88999999999876

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.89  E-value=4e-22  Score=191.52  Aligned_cols=323  Identities=15%  Similarity=0.097  Sum_probs=203.1

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCCCcc----C----cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGENKE----Y----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~----y----~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .|+|..+..++++.+.+++.+.+.......    +    ......+++|+.+++++..      ++++|++  ++|+|++
T Consensus         5 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~v~~--~~g~t~a   76 (402)
T TIGR02006         5 IYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGA------DSREIVF--TSGATES   76 (402)
T ss_pred             EEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCCHHHH
Confidence            466777777778999999877653211010    1    1123466778888888643      2678999  9999999


Q ss_pred             HHHHHHHHHH--hCCCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283          115 LRLAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA  189 (410)
Q Consensus       115 ~~~~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p  189 (410)
                      +.+++..+..  ..+||.|+++.+.|+.+...+   +..|.+++.++.  .+++.+|++.+++.+++   ++.+++++++
T Consensus        77 ~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~l~~---~~~lv~v~~~  151 (402)
T TIGR02006        77 NNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPP--KSNGLIDLEELKAAIRD---DTILVSIMHV  151 (402)
T ss_pred             HHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEcc--CCCCcCCHHHHHHhcCC---CCEEEEEECC
Confidence            9987544432  258999999999998766544   456888888887  34567899999998865   5778888999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      +||||.+.+   +++|.++|+++|+++++|++++ ++..+.+         ......++++.|.+|.+|++|  +|++++
T Consensus       152 ~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a-~g~~~~~---------~~~~~~D~~~~s~~K~~gp~G--~G~l~~  216 (402)
T TIGR02006       152 NNEIGVIQD---IAAIGEICRERKVFFHVDAAQS-VGKIPIN---------VNELKVDLMSISGHKIYGPKG--IGALYV  216 (402)
T ss_pred             CcCceeccc---HHHHHHHHHHcCCEEEEEcchh-cCCcccC---------ccccCCCEEEEehhhhcCCCc--eEEEEE
Confidence            999999665   6678888999999999999964 3321111         112235678889999888667  578754


Q ss_pred             EeCCchhHHHHHHHHHh--hccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283          270 VCSSSDLAARVKSQLKR--LARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~  346 (410)
                         +++...++......  ..+.... +++.....++...++.      ..+.++...++.++.++++.+.|+ ++..  
T Consensus       217 ---~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~------~~~~~~~~~~~~~~l~~~l~~~l~-~~~~--  284 (402)
T TIGR02006       217 ---RRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI------AKEEMAQDTAHVLALRDRLLNGIK-SIEE--  284 (402)
T ss_pred             ---ccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHh-cCCC--
Confidence               33222111111100  0011122 2333222222233321      122356677888999999999987 6541  


Q ss_pred             Cccccc------CCcceeeecCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCc
Q 015283          347 DWSFIL------RQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSL  392 (410)
Q Consensus       347 ~~~~~~------~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~  392 (410)
                       +.+..      |....+.|.+...+.+...++  ++.+..|                         +  |+|+.. .|+
T Consensus       285 -v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l~--~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~  361 (402)
T TIGR02006       285 -VYLNGDLEHRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTE  361 (402)
T ss_pred             -EEEeCCccccCCCeEEEEEeCcCHHHHHHhcC--CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCH
Confidence             22211      111134444444444333332  4544221                         2  999875 388


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      +|++++++.|+++++.
T Consensus       362 edid~l~~~l~~~~~~  377 (402)
T TIGR02006       362 EEIDYAVKLVKSAIDK  377 (402)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998764

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.89  E-value=1.1e-21  Score=187.43  Aligned_cols=321  Identities=17%  Similarity=0.115  Sum_probs=196.4

Q ss_pred             ecCCCcc-cccHHHHHHHHHhhccCC----CccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           45 RTEELQP-YVLDVVKKAENLMLERGE----NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        45 ~~~~~~~-~~~~~v~~a~~~~~~~~~----~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      +|..+.+ +.|+.+.+++.+.+....    ...|..    ..+..++|+.+++++...     ..++|++  ++|+++++
T Consensus         3 ld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~al   75 (376)
T TIGR01977         3 FDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAP-----SSAHVVF--TNNATTAL   75 (376)
T ss_pred             ccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE--eCCHHHHH
Confidence            3444444 346888888877664321    112322    256778999999997432     1357888  99999999


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          116 RLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       116 ~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ..+  +...+.+||+|+++.++|+.+..    .++.+|.+++.++..  +++.+|++++++.+++   +++++++++|+|
T Consensus        76 ~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~---~~~~v~~~~~~n  148 (376)
T TIGR01977        76 NIA--LKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIKT---NTKLIVVSHASN  148 (376)
T ss_pred             HHH--HHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcCC---CCeEEEEECCCC
Confidence            987  34446799999999999987643    344568898888873  4567899999998864   677788899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++.   ++|.++|+++|+++|+|++++.... +.+.         .....++++.|.+|.++.|. ..|.+++  
T Consensus       149 ~tG~~~~~---~~i~~l~~~~~~~livD~a~~~g~~-~~~~---------~~~~~D~~~~s~~K~l~~p~-g~g~l~~--  212 (376)
T TIGR01977       149 VTGTILPI---EEIGELAQENGIFFILDAAQTAGVI-PIDM---------TELAIDMLAFTGHKGLLGPQ-GTGGLYI--  212 (376)
T ss_pred             CccccCCH---HHHHHHHHHcCCEEEEEhhhccCcc-CCCc---------hhcCCCEEEecccccccCCC-CceEEEE--
Confidence            99998875   5677779999999999999643221 1111         12245688889999875332 2466643  


Q ss_pred             CCchhHHHHHHH---HHh--------h-ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          272 SSSDLAARVKSQ---LKR--------L-ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       272 ~~~~~~~~~~~~---~~~--------~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      +++..++.+...   ...        . .+...++++.....++...++   +.  .+...+.++++.+++.+.+.+.|.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~---~~--~~~g~~~~~~~~~~l~~~~~~~l~  287 (376)
T TIGR01977       213 REGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIK---FI--EKIGIANIAKKECMLTEKLLNGLR  287 (376)
T ss_pred             cCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHH---HH--HHhCHHHHHHHHHHHHHHHHHHHh
Confidence            233211111100   000        0 000111222222222222221   10  012245677888888888888887


Q ss_pred             hccCCCCCcccccC-----Cccee--eecCCCHHHHH-HhhhcCcEEEcCC----------------C--eEEecC-CCc
Q 015283          340 AKDKSGKDWSFILR-----QIGMF--SFTGLNKAQSD-NMTNKWHVYMTKD----------------G--RISLAG-LSL  392 (410)
Q Consensus       340 ~~~g~~~~~~~~~~-----~~~~~--~~~~~~~~~~~-~ll~~~gi~v~~~----------------g--Ris~~~-~~~  392 (410)
                       +.+.   +....+     ..+..  ...+.+.+.+. .|.+++||.+.+|                +  |+++.. .|+
T Consensus       288 -~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~  363 (376)
T TIGR01977       288 -EINK---VKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTE  363 (376)
T ss_pred             -cCCC---eEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCH
Confidence             6542   232221     12222  11234555554 4444448887542                2  998664 489


Q ss_pred             ccHHHHHHHHHH
Q 015283          393 AKCEYLADAIID  404 (410)
Q Consensus       393 ~~i~~~~~~l~~  404 (410)
                      ++++.++++|++
T Consensus       364 ~dv~~~~~~l~~  375 (376)
T TIGR01977       364 EEIEKLLEALSE  375 (376)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999976

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.89  E-value=9.7e-21  Score=180.76  Aligned_cols=217  Identities=16%  Similarity=0.078  Sum_probs=149.3

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~  150 (410)
                      +..+..+|++++++++..        ++.++  +++|++|+..+  +...+.+||+|+++.|.|+.+...    ++..|.
T Consensus        62 ~~p~~~~Le~~iA~~~g~--------~~~l~--~~sG~~Ai~~a--l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~  129 (400)
T PRK06234         62 GNPTSTEVENKLALLEGG--------EAAVV--AASGMGAISSS--LWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV  129 (400)
T ss_pred             CCccHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence            677899999999999642        23455  69999998877  445578999999999999876544    456788


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc--CCcccccccCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASG  228 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~  228 (410)
                      +++.++.       .|++++++.+++   +++++++++|+||||.+.+   +++|+++|+++  |+++|+|++|......
T Consensus       130 ~v~~vd~-------~d~e~l~~~i~~---~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~  196 (400)
T PRK06234        130 EVTFVDT-------SNLEEVRNALKA---NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ  196 (400)
T ss_pred             EEEEECC-------CCHHHHHHHhcc---CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence            8888765       278899988875   6778888999999999776   66777778986  9999999998765532


Q ss_pred             CCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh
Q 015283          229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV  307 (410)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l  307 (410)
                      .      .+     ..+.++++.|+||.++.+|+++ ||++.   +++++++++......  ......+......+...|
T Consensus       197 ~------~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~---~~~~~~~l~~~~~~~--~~g~~l~p~~a~l~~~~l  260 (400)
T PRK06234        197 R------PL-----QLGADVVVHSATKYLNGHGDVIAGFVVG---KEEFINQVKLFGIKD--MTGSVIGPFEAFLIIRGM  260 (400)
T ss_pred             C------ch-----hhCCcEEEeeccccccCCCCceeEEEEe---cHHHHHHHHHHHHHH--hcCCCCCHHHHHHHHhcc
Confidence            1      11     1135689999999999889876 88643   667666654321111  111233343333344444


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      +..          ....++..++...+.+.|+ +.+
T Consensus       261 ~tl----------~~r~~~~~~na~~~a~~L~-~~~  285 (400)
T PRK06234        261 KTL----------QIRMEKHCKNAMKVAKFLE-SHP  285 (400)
T ss_pred             CcH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence            432          2333344456666666666 543

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.89  E-value=7.2e-21  Score=183.01  Aligned_cols=327  Identities=11%  Similarity=0.075  Sum_probs=202.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|..-...|+.  .|.+.+++.+.++.. +...+.......++.+.++++. .       .+++++  +++|+
T Consensus        41 ~~~lD~~~~~~~~~~Gh~--~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~SGs  108 (401)
T PRK00854         41 NRYLDCLSAYSAVNQGHC--HPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT-G-------SHKVLP--MNSGA  108 (401)
T ss_pred             CEEEEcCcchhhccCCCC--CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC-C-------CCEEEE--eCCcH
Confidence            467888777432233443  588888888877542 2111223345566777777763 1       246888  89999


Q ss_pred             hHHHHHHHHHHHhC-------CC-CEEEEcCCCCcchhhhhhhCCC-------------CccceeeecCCCcccChhhHH
Q 015283          113 GSLRLAAALIERYF-------PG-AKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus       113 ~a~~~~~~~~~~~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~l~  171 (410)
                      +|++.+.+++..+.       +| ++|++..-+|.+....+...+.             ++..++.       .|++.++
T Consensus       109 ~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le  181 (401)
T PRK00854        109 EAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALE  181 (401)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHH
Confidence            99999987775541       24 6888887766554322221111             1222222       3789999


Q ss_pred             HHHhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          172 ADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      +.+.+   +++++++++|+||||.+++.. .+++|.++|++||+++|+||+|.+++..+   ..+.... .+...+.+ +
T Consensus       182 ~~i~~---~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g---~~~~~~~-~g~~~D~~-~  253 (401)
T PRK00854        182 AAITP---NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTG---KLLAEEH-EGIEADVT-L  253 (401)
T ss_pred             HHhCC---CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---hHhHHhh-cCCCCCEE-E
Confidence            88864   678888899999999999755 59999999999999999999998776432   1111111 11122333 2


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                        +||.++...+|+||++.   ++++++.+    .......+.+.+.+.+.++...|+..      .+  ....+.++++
T Consensus       254 --~~K~l~gg~~~ig~v~~---~~~~~~~l----~~~~~~~t~~~~~~~~aa~~a~L~~l------~~--~~~~~~~~~~  316 (401)
T PRK00854        254 --IGKALSGGFYPVSAVLS---NSEVLGVL----KPGQHGSTFGGNPLACAVARAALKVL------TE--EGMIENAAEM  316 (401)
T ss_pred             --ecccccCCccCeEEEEE---cHHHHhcc----cCCCCCCCCCcCHHHHHHHHHHHHHH------HH--cCHHHHHHHH
Confidence              47999744479999754   77755443    22222222234555666655554321      10  2345777888


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeec--CC--C-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL--N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLAD  400 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~--~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~  400 (410)
                      .+++.+.|+ +++... +....+.+.++.+.  +-  + .++.+.+++ .||.+.+.+    ||++. ..++++++++++
T Consensus       317 ~~~l~~~L~-~~~~~~-~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~-~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~  393 (401)
T PRK00854        317 GAYFLEGLR-SIRSNI-VREVRGRGLMLAVELEPEAGGARQYCEALKE-RGLLAKDTHDHTIRLAPPLVITREQVDWALE  393 (401)
T ss_pred             HHHHHHHHH-hhccCc-eEEEeccceEEEEEEecCchhHHHHHHHHHH-CCeEEecCCCCEEEEeCCcccCHHHHHHHHH
Confidence            888888888 765210 11223444444432  21  2 334566665 599997653    88864 349999999999


Q ss_pred             HHHHHhh
Q 015283          401 AIIDSYH  407 (410)
Q Consensus       401 ~l~~~l~  407 (410)
                      +|++++.
T Consensus       394 ~l~~~l~  400 (401)
T PRK00854        394 QIAKVLA  400 (401)
T ss_pred             HHHHHhh
Confidence            9999874

>PLN00144 acetylornithine transaminase

Probab=99.89  E-value=7.3e-21  Score=180.63  Aligned_cols=333  Identities=13%  Similarity=0.033  Sum_probs=198.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++... +...+.......++.+.+++.    .+    .+.+.+  +++|+
T Consensus        15 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~----~~----~~~v~f--~~sGs   82 (382)
T PLN00144         15 KEYLDMAAGIAVNALGHG--DPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVAS----SF----ADRVFF--CNSGT   82 (382)
T ss_pred             CEEEECCcCHHhccCCCC--CHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhc----CC----CCeEEE--eCCcH
Confidence            467888877532344554  588888888887542 111111122223444444443    11    358888  99999


Q ss_pred             hHHHHHHHHHHHhCC-------------CCEEEEcCCCCcchhhhhh-hCCCCc---cceeeecCCC--cccChhhHHHH
Q 015283          113 GSLRLAAALIERYFP-------------GAKVLISSPTWGNHKNIFN-DARVPW---SEYRYYDPKT--VGLDFEGMIAD  173 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~-------------gd~Vl~~~p~y~~~~~~~~-~~g~~~---~~v~~~~~~~--~~~d~~~l~~~  173 (410)
                      +|++.+.++.+.+..             ..+|+....+|.+...... ..+...   ...+..+.-.  .-.|++.+++.
T Consensus        83 eA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~  162 (382)
T PLN00144         83 EANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKL  162 (382)
T ss_pred             HHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHh
Confidence            999999888776531             2478888888866543222 111110   0011100000  01268888888


Q ss_pred             HhcCCCCcEEEEeCCCCCCCCCCCCHHH--HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          174 IKAAPGGSFILLHGCAHNPTGIDPTPEQ--WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~--l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      +..  ....++++...+||.| +++...  +++|.++|++||+++|+||+|.+|+..+   ..+... .....++   +.
T Consensus       163 ~~~--~~~aavi~eP~q~~gg-~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g---~~~~~~-~~~~~PD---i~  232 (382)
T PLN00144        163 IQK--GKTAAVFVEPVQGEGG-IYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG---YLWAHE-AYGVEPD---IM  232 (382)
T ss_pred             cCC--CCeEEEEEccccCCCC-CccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hHhhhh-hcCCCCC---EE
Confidence            753  3455555455599944 444444  9999999999999999999999887432   222221 1222234   66


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH---HHhCChhhHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +|||.++ +|+|+||+++   ++++.+.+..    .....+...+.+++.++.   .+++++++    .+++++..+.+ 
T Consensus       233 t~sK~l~-~G~pig~v~~---~~~~~~~~~~----~~~~~T~~~~pl~~aaa~a~l~~i~~~~~----~~~~~~~g~~l-  299 (382)
T PLN00144        233 TLAKPLA-GGLPIGAVLV---TEKVASAINP----GDHGSTFAGGPLVCNAALAVLDKISKPGF----LASVAKKGEYL-  299 (382)
T ss_pred             Eeccccc-CCcceEEEEE---cHHHHhccCC----CCCCCCCCCCHHHHHHHHHHHHHHhhchH----HHHHHHHHHHH-
Confidence            8999998 7999999855   7775554422    122222344555555555   55555443    33344444444 


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC-----eEEecC-CCcccHHHHH
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG-----RISLAG-LSLAKCEYLA  399 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g-----Ris~~~-~~~~~i~~~~  399 (410)
                        ++.+.+.+. +.+.   +. .....|++.|+.++   ..+...+++ .||.+.|++     ||+++. .+++++++++
T Consensus       300 --~~~l~~~~~-~~~~---~~-~vrg~G~~~~l~l~~~~~~~~~~~~~-~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~  371 (382)
T PLN00144        300 --RELLRRKLG-GNPH---VK-EVRGVGLLVGIQLDVPAGPLVDACRD-SGLLVLTAGKGDVVRLVPPLVISEAELEQAV  371 (382)
T ss_pred             --HHHHHHHHh-hCCC---ce-eeecCceEEEEEecCccHHHHHHHHH-CCeEEeecCCCCEEEEeCCCccCHHHHHHHH
Confidence              333444444 3331   11 12237888888652   345556655 699998864     898876 6899999999


Q ss_pred             HHHHHHhhhc
Q 015283          400 DAIIDSYHNV  409 (410)
Q Consensus       400 ~~l~~~l~~~  409 (410)
                      ++|.+++.+.
T Consensus       372 ~~l~~~l~~~  381 (382)
T PLN00144        372 EILADCLPAL  381 (382)
T ss_pred             HHHHHHHHhc
Confidence            9999998753

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.89  E-value=1.1e-20  Score=178.56  Aligned_cols=277  Identities=14%  Similarity=0.154  Sum_probs=186.2

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcch----hhhhh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFN  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~----~~~~~  146 (410)
                      .+| +.....+|++.++++....       ..+ +  ++||++++.++   +..+.+||+|++++|+|+..    ...+.
T Consensus        47 ~r~-~~pt~~~le~~la~l~g~~-------~~~-~--~~sG~~ai~~~---~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~  112 (366)
T PRK08247         47 SRT-GNPTRGVLEQAIADLEGGD-------QGF-A--CSSGMAAIQLV---MSLFRSGDELIVSSDLYGGTYRLFEEHWK  112 (366)
T ss_pred             cCC-CCchHHHHHHHHHHHhCCC-------cEE-E--EcCHHHHHHHH---HHHhCCCCEEEEecCCcCcHHHHHHHHhh
Confidence            444 4556789999999996432       223 3  68899998875   34567999999999999874    33455


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.+++.++.       .|++.+++.+.+   +++++++++|+||+|.   ..++++|+++|+++|+++|+|++|....
T Consensus       113 ~~G~~v~~vd~-------~d~~~l~~~i~~---~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~  179 (366)
T PRK08247        113 KWNVRFVYVNT-------ASLKAIEQAITP---NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPV  179 (366)
T ss_pred             ccCceEEEECC-------CCHHHHHHhccc---CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccc
Confidence            68888877765       378899988875   6788888999999876   8899999999999999999999985433


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                      ..    .  ++     ....+++++|+||.++.+ +++.||+  +++++++.+++.....    ......+...+.++..
T Consensus       180 ~~----~--p~-----~~g~di~i~S~sK~~~g~~d~~~G~i--v~~~~~l~~~~~~~~~----~~g~~~s~~~a~l~~~  242 (366)
T PRK08247        180 LQ----R--PL-----EEGADIVIHSATKYLGGHNDVLAGLV--VAKGQELCERLAYYQN----AAGAVLSPFDSWLLIR  242 (366)
T ss_pred             cc----C--ch-----hcCCcEEEeecceeccCCCceeeeEE--ecChHHHHHHHHHHHH----hcCCCCChHHHHHHHh
Confidence            21    0  11     123579999999999643 4578886  4444665555543222    1122334444555555


Q ss_pred             HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc-c-ccCCcceeeecCC-CHHHHHHhhh---------
Q 015283          306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-F-ILRQIGMFSFTGL-NKAQSDNMTN---------  373 (410)
Q Consensus       306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~ll~---------  373 (410)
                      .|+.-          ....++.+++++.+.+.|+ +.+.   +. + .++.+++|.|. + ..+...++++         
T Consensus       243 ~l~tl----------~~r~~~~~~~a~~l~~~L~-~~p~---v~~v~~P~~gg~~sf~-~~~~~~~~~~~~~l~~~~~~~  307 (366)
T PRK08247        243 GMKTL----------ALRMRQHEENAKAIAAFLN-EQPG---VTDVLYPGRGGMLSFR-LQDEEWVNPFLKSLKLITFAE  307 (366)
T ss_pred             ccCcH----------HHHHHHHHHHHHHHHHHHH-hCCC---eeEEecCCcCcEEEEE-ECCHHHHHHHHHcCCcceEcc
Confidence            44422          2344456888899999998 7642   22 2 44478998883 3 2222322222         


Q ss_pred             ----cCcEEEcCC---------------C------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          374 ----KWHVYMTKD---------------G------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       374 ----~~gi~v~~~---------------g------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                          ..++.+.|+               |      |||++-   |+++.+++.|.++++.+
T Consensus       308 slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~~  365 (366)
T PRK08247        308 SLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQV  365 (366)
T ss_pred             CCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhhc
Confidence                123444443               1      888854   88999999999998764

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.89  E-value=2.9e-21  Score=184.23  Aligned_cols=318  Identities=10%  Similarity=0.055  Sum_probs=190.6

Q ss_pred             cHHHHHHHHHhhcc--CCCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh----C
Q 015283           54 LDVVKKAENLMLER--GENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY----F  126 (410)
Q Consensus        54 ~~~v~~a~~~~~~~--~~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~----~  126 (410)
                      .+.+.+++......  +....|+. ..-..++++.+++++...      ++++++  ++|+++++..+...+..+    .
T Consensus        33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~------~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~  104 (373)
T TIGR03812        33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLP------DAYGYI--VSGGTEANIQAVRAAKNLAREEK  104 (373)
T ss_pred             hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCC------CCCeEE--eccHHHHHHHHHHHHHHHHhccC
Confidence            45556666555422  11122321 111246666677665322      456666  789999887764433321    3


Q ss_pred             CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      +||.|++++++|..+...++..|++++.++.  .+++.+|++++++.+.+   ++..++..+|+||||.+.   ++++|.
T Consensus       105 ~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~--~~~~~~d~~~l~~~l~~---~~~~vv~~~~~~~tG~~~---~~~~i~  176 (373)
T TIGR03812       105 RTPNIIVPESAHFSFEKAAEMLGLELRYAPL--DEDYTVDVKDVEDLIDD---NTIGIVGIAGTTELGQID---DIEELS  176 (373)
T ss_pred             CCcEEEECCcchHHHHHHHHHcCCeEEEEee--CCCCCcCHHHHHHHHhh---CcEEEEEECCCCCCCccC---CHHHHH
Confidence            6799999999999999999999999999987  34677899999999875   343333334789999965   466777


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCC---CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLD---NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ  283 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~  283 (410)
                      ++|+++|+++++|++|..+... ..   .....+.  .....-..+..|.+| +++++.|.|++  +..+++.++.+...
T Consensus       177 ~l~~~~~~~livD~a~~~~~~~-~~~~~~~~~~~d--~~~~~~d~~~~s~~K-~~~~~~~~G~~--~~~~~~~~~~l~~~  250 (373)
T TIGR03812       177 KIALENGIYLHVDAAFGGFVIP-FLKKGYNPPPFD--FSLPGVQSITIDPHK-MGLSPIPAGGI--LFRSKSYLKYLSVD  250 (373)
T ss_pred             HHHHHcCCeEEEEcCchhHHHH-HHhcCCCCCCcc--ccCCCCCEEEECccc-cCCCcCCceEE--EEeCHHHHhhhccc
Confidence            7799999999999998754311 00   0000000  001112344567789 66677888876  33466655544210


Q ss_pred             HHhhccCc----c-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee
Q 015283          284 LKRLARPM----Y-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF  358 (410)
Q Consensus       284 ~~~~~~~~----~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~  358 (410)
                       ..+....    . .+++.....++...|+.-.     ++.+++..+++.++++++.+.|+ ++|.   ..+..+... +
T Consensus       251 -~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~-----~~g~~~~~~~~~~~~~~l~~~L~-~~g~---~~~~~~~~~-~  319 (373)
T TIGR03812       251 -APYLTVKKQATITGTRSGASAAATYAVIKYLG-----REGYRKIVAECMENTRYLVEELK-KIGF---EPVIEPVLN-I  319 (373)
T ss_pred             -CcccCCCCCcceEeechhHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHH-hCCC---eEEcCCCce-E
Confidence             1110000    0 1112222222223332110     23456778899999999999999 8763   123333333 3


Q ss_pred             eecCC-C-HHHHHHhhhcCcEEEcCCC-----eEEecC-CCcccHHHHHHHHHHH
Q 015283          359 SFTGL-N-KAQSDNMTNKWHVYMTKDG-----RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       359 ~~~~~-~-~~~~~~ll~~~gi~v~~~g-----Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                      +.+.. + .++.++|.+ +||.+.++.     |+++.. .++++++.+++.|+++
T Consensus       320 v~~~~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~~  373 (373)
T TIGR03812       320 VAFEVDDPEEVRKKLRD-RGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKEI  373 (373)
T ss_pred             EEEEeCCHHHHHHHHHH-CCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence            33333 2 334555554 699997652     998764 3889999999999763

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.88  E-value=1.4e-20  Score=178.72  Aligned_cols=324  Identities=11%  Similarity=0.028  Sum_probs=192.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-----CCCccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceE
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-----GENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVA  104 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----~~~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~  104 (410)
                      ..+++|++++||+...+|++.+.+.+++.+....     .+.....    ...-+.++++.+++++...       +.++
T Consensus         4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-------~~l~   76 (370)
T PRK05937          4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-------EAFI   76 (370)
T ss_pred             CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-------eEEE
Confidence            4689999999999999988788888888776311     0001111    2334678999999986442       3355


Q ss_pred             EEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCC
Q 015283          105 TVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGG  180 (410)
Q Consensus       105 ~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~  180 (410)
                      +  ++ |+.++..+   ...+ .+||.|++..-.|......+.......+.++.       .|++++++.++..   ++.
T Consensus        77 ~--~s-G~~a~~~~---~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~  143 (370)
T PRK05937         77 V--PS-GYMANLGL---CAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFG  143 (370)
T ss_pred             E--CC-hHHHHHHH---HHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCC
Confidence            5  44 44444332   3333 47788877777887776666654333333322       4789998888642   134


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      +.++++++++|+||.+.|   +++|.++|+++|+++++|++|.....+ .+..  .+.......+..+.+.|+||.+|+.
T Consensus       144 ~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g-~~g~--g~~~~~~~~~~~~~~~tlsK~~g~~  217 (370)
T PRK05937        144 RIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFG-DDGK--GFCHSLGYENFYAVLVTYSKALGSM  217 (370)
T ss_pred             cEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccC-CCCC--chHHhhCCCCCcEEEEechhhhhcC
Confidence            566777899999999777   556777799999999999998643322 2111  1111111112236688999999977


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      |.+  .+ .   .++..+.+...........  +.+..+..++   ...+.+.         .+..+++++++++++.+.
T Consensus       218 G~~--vl-~---~~~~~~~~~~~~~~~~~s~--~~~~~~~~a~~aal~~l~~~---------~~~~~~~l~~l~~~l~~~  280 (370)
T PRK05937        218 GAA--LL-S---SSEVKQDLMLNSPPLRYST--GLPPHLLISIQVAYDFLSQE---------GELARKQLFRLKEYFAQK  280 (370)
T ss_pred             ceE--EE-c---CHHHHHHHHHhCCCCeecC--CCCHHHHHHHHHHHHHHHhC---------cHHHHHHHHHHHHHHHHh
Confidence            732  22 2   4554444432222222111  2222222222   2222211         134566778888888877


Q ss_pred             hhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcC----C-C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          338 LSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTK----D-G--RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~----~-g--Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +. ..+.    ...    ..+.+.+...+.+.+.++++||.+..    . +  |+|+.. .|++|++++++.|+++++++
T Consensus       281 l~-~~~~----~~~----~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~  351 (370)
T PRK05937        281 FS-SAAP----GCV----QPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKY  351 (370)
T ss_pred             cC-CCCC----CCE----EEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence            76 4321    000    11222233444455555667998863    1 2  999864 38999999999999988654

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.88  E-value=1.8e-20  Score=180.32  Aligned_cols=337  Identities=10%  Similarity=0.022  Sum_probs=194.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+.+... +...........++++.++++.    +    .+.+++  +++|+
T Consensus        31 ~~~lD~~~~~~~~~~Gh~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~----~~~~~~--~~SGs   98 (400)
T PTZ00125         31 KKYYDFLSAYSAVNQGHC--HPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF----G----YDKVLP--MNSGA   98 (400)
T ss_pred             CEEEEcccCHhhccCCcC--CHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC----C----CCEEEE--eCCcH
Confidence            467898877542233443  688999888876431 1111111223345555555542    2    257788  89999


Q ss_pred             hHHHHHHHHHHHh--------CCCCEEEEcCCCCcchhh-hhhhCCCC-cc--ceeeecC--CCcccChhhHHHHHhcCC
Q 015283          113 GSLRLAAALIERY--------FPGAKVLISSPTWGNHKN-IFNDARVP-WS--EYRYYDP--KTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       113 ~a~~~~~~~~~~~--------~~gd~Vl~~~p~y~~~~~-~~~~~g~~-~~--~v~~~~~--~~~~~d~~~l~~~i~~~~  178 (410)
                      +|++.+.++....        ..+++|+..+-+|.+... .+...+.. ..  ..+..+.  .-.-.|++.+++.+..  
T Consensus        99 ~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--  176 (400)
T PTZ00125         99 EAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD--  176 (400)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC--
Confidence            9999987766432        134788888877765532 22222211 00  0000000  0001378999988862  


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                      +++.++++.+++||||.+++.+ .+++|.++|++||+++|+||+|.+++..+   ..+... .....++++   ++||.+
T Consensus       177 ~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G---~~~~~~-~~~~~pd~~---~~sK~l  249 (400)
T PTZ00125        177 PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG---KLLAHD-HEGVKPDIV---LLGKAL  249 (400)
T ss_pred             CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhHHH-hcCCCCCEE---EEcccc
Confidence            3677777788899999998755 49999999999999999999998876431   122111 111122333   478999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      +.+++|+||+++   ++++++.+..    .....+.+.+...+.++...|+.-      .+  +...++.+++.+++.+.
T Consensus       250 ~~g~~~ig~v~~---~~~~~~~~~~----~~~~~t~~~~~~~~~aa~~~l~~i------~~--~~~~~~~~~~~~~l~~~  314 (400)
T PTZ00125        250 SGGLYPISAVLA---NDDVMLVIKP----GEHGSTYGGNPLACAVAVEALEVL------KE--EKLAENAQRLGEVFRDG  314 (400)
T ss_pred             cCCCcCcEEEEE---cHHHHhhccC----CCCCCCCCcCHHHHHHHHHHHHHH------Hh--cCHHHHHHHHHHHHHHH
Confidence            855569999855   7775555432    222222234445555554333210      00  11233444455555555


Q ss_pred             hhhcc-CCCCCcccccCCcceeeecCC------C-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHH
Q 015283          338 LSAKD-KSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIID  404 (410)
Q Consensus       338 l~~~~-g~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~  404 (410)
                      |+ ++ +....+....+ .|.+.++.+      . .++..++++ +||.+.|++    ||+.. ..+++++++++++|.+
T Consensus       315 l~-~l~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~  391 (400)
T PTZ00125        315 LK-ELLKKSPWVKEIRG-KGLLNAIVFDHSDGVNAWDLCLKLKE-NGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKK  391 (400)
T ss_pred             HH-HHHhcCCCeEEEec-ccEEEEEEEccCcchHHHHHHHHHHH-CCeEEeecCCCEEEEECCccCCHHHHHHHHHHHHH
Confidence            55 43 11011122333 345544422      1 234566665 699999865    89854 2489999999999999


Q ss_pred             Hhhhc
Q 015283          405 SYHNV  409 (410)
Q Consensus       405 ~l~~~  409 (410)
                      ++.++
T Consensus       392 ~l~~~  396 (400)
T PTZ00125        392 VLKSF  396 (400)
T ss_pred             HHHHH
Confidence            88764

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.88  E-value=9.6e-21  Score=181.25  Aligned_cols=327  Identities=15%  Similarity=0.105  Sum_probs=199.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-+..|+.  +|.+.+++.+++....  ...| +..-..++.+.++++.    +    .+.+.+  +++|
T Consensus        35 ~~ylD~~~g~~~~~lGh~--~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~L~~~~----~----~~~~~f--~~SG  101 (397)
T TIGR03246        35 KEYIDFAGGIAVNALGHA--HPELVKALIEQADKLWHIGNGY-TNEPVLRLAKKLVDAT----F----ADKVFF--CNSG  101 (397)
T ss_pred             CEEEECCcCHhhccCCCC--CHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCCc
Confidence            568999887433455664  6899999888775421  1122 2223446666666652    1    357888  8999


Q ss_pred             hhHHHHHHHHHHHhC------CCCEEEEcCCCCcchhh-hhhhCCCC------------ccceeeecCCCcccChhhHHH
Q 015283          112 TGSLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus       112 t~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~~  172 (410)
                      ++|++.+.++.+.+.      ..++|+..+-+|.+... .+...+..            +..++.       .|++.+++
T Consensus       102 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~  174 (397)
T TIGR03246       102 AEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKA  174 (397)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHH
Confidence            999999988876652      23678887777665532 22322211            111221       37889988


Q ss_pred             HHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          173 DIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       173 ~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      .+.+   ++.++++.+++++.|... +.+.+++|.++|++||+++|+||+|.+++..   ...+....+ +..++++   
T Consensus       175 ~l~~---~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~---G~~~a~~~~-gv~pDi~---  244 (397)
T TIGR03246       175 LISD---KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRT---GELYAYMHY-GVTPDIL---  244 (397)
T ss_pred             Hhcc---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcc---ccchhhhhc-CCCCCEE---
Confidence            8864   566777665566666554 7888999999999999999999999888633   222222111 1122333   


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      ++||.++ +|+++||+++   ++++.+.+    .......+.+.+.+++.++...|+..+        .++..++++++.
T Consensus       245 t~~K~lg-gG~pigav~~---~~~i~~~~----~~~~~~~t~~~~p~~~aaa~a~l~~~~--------~~~l~~~~~~~~  308 (397)
T TIGR03246       245 TSAKALG-GGFPIGAMLT---TTEIAAHL----KVGTHGTTYGGNPLACAVAGKVLDLVN--------TPELLAGVKQRH  308 (397)
T ss_pred             Eeehhhh-CCcceeEEEE---cHHHHHhc----cCCCcCCCCCCCHHHHHHHHHHHHHHh--------hccHHHHHHHHH
Confidence            7899998 7999999755   77754443    222222222334444455444433110        124567777888


Q ss_pred             HHHHHHhhhccCCCCCc-ccccCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHH
Q 015283          332 QKLFDSLSAKDKSGKDW-SFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYL  398 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~  398 (410)
                      +++.+.|+ +++....+ ......+.++ .+.+       ...+..++++ +|+.+.+.|    |++.+. .++++++++
T Consensus       309 ~~l~~~L~-~l~~~~~~~~~vrg~G~~~-~i~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~  385 (397)
T TIGR03246       309 DLFVDGLE-KINARYNVFSEIRGKGLLI-GAVLTEAYQGKAKQFVNAAAE-EGVIALIAGPNVVRFAPSLVISDDDIDEG  385 (397)
T ss_pred             HHHHHHHH-HHHhcCCCeEeeecCceEE-EEEEcCchhhHHHHHHHHHHH-CCeEEeecCCCEEEEeCCCCCCHHHHHHH
Confidence            88888887 66421111 1222333322 2211       2234556665 699987654    785332 499999999


Q ss_pred             HHHHHHHhhhc
Q 015283          399 ADAIIDSYHNV  409 (410)
Q Consensus       399 ~~~l~~~l~~~  409 (410)
                      +++|.+++.++
T Consensus       386 ~~~l~~~l~~~  396 (397)
T TIGR03246       386 LARFERAIEQV  396 (397)
T ss_pred             HHHHHHHHHHh
Confidence            99999998754

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.88  E-value=3.1e-20  Score=177.04  Aligned_cols=219  Identities=12%  Similarity=0.108  Sum_probs=145.3

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----h
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~  146 (410)
                      .+| +.....++++.++++....        ...+  +++|+.++..+  +...+.+||+|+++.|.|+.+...+    .
T Consensus        60 ~r~-~~p~~~~Le~~lA~l~G~~--------~~~~--~~sG~~Ai~~~--l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~  126 (398)
T PRK07504         60 SRY-SNPTVDMFEKRMCALEGAE--------DARA--TASGMAAVTAA--ILCQVKAGDHVVAARALFGSCRYVVETLLP  126 (398)
T ss_pred             ecC-CCchHHHHHHHHHHHhCCC--------eeeE--ecCHHHHHHHH--HHHHhCCCCEEEEcCCchhHHHHHHHHHHh
Confidence            334 4556789999999995332        2223  57888888765  4445789999999999999765544    3


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.+++.++.       +|++++++.+.+   +++++++++|+||||.+.+   +++|.++|+++|+++|+|++|....
T Consensus       127 ~~G~~v~~vd~-------~d~e~l~~ai~~---~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~  193 (398)
T PRK07504        127 RYGIESTLVDG-------LDLDNWEKAVRP---NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPL  193 (398)
T ss_pred             hcCeEEEEECC-------CCHHHHHHhcCc---CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccc
Confidence            56776666642       688999998864   7888888999999999776   6677777999999999999987554


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHH-HHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                      ..    .  .+     ..+.++++.|+||.++.+|+++|++  ++.+++.+. ++...+.    ......+...+.++..
T Consensus       194 ~~----~--~~-----~~gaDivv~S~sK~l~g~g~~~GG~--vv~~~~~i~~~~~~~~~----~~g~~~s~~~A~~~l~  256 (398)
T PRK07504        194 FQ----K--PL-----ELGAHIVVYSATKHIDGQGRCLGGV--VLSDKAWIEEHLQDYFR----HTGPSLSPFNAWTLLK  256 (398)
T ss_pred             cC----C--ch-----hhCCCEEEeeccccccCCccceEEE--EEeCcHHHHHHHHHHHH----HhCCCCCHHHHHHHHh
Confidence            32    1  11     1135688999999999899999765  333555443 2332222    1122334433333444


Q ss_pred             HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .|+.-          ....++..++...+.+.|+ +.+
T Consensus       257 ~L~tl----------~~R~~~~~~na~~la~~L~-~~p  283 (398)
T PRK07504        257 GLETL----------PVRVRQQTESAAAIADFLA-GHP  283 (398)
T ss_pred             ccchH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence            44332          2333444466666677776 543

>PRK14012 cysteine desulfurase; Provisional

Probab=99.88  E-value=6e-21  Score=183.57  Aligned_cols=324  Identities=15%  Similarity=0.113  Sum_probs=197.1

Q ss_pred             eeecCCCcccccHHHHHHHHHhhc--cCCC--cc------CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLE--RGEN--KE------YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~--~~~~--~~------y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      .|+|..+..++++.+.+++.++..  ....  ..      +.......++|+.+++++...      ++++++  ++|||
T Consensus         5 iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~------~~~v~~--~~g~t   76 (404)
T PRK14012          5 IYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD------PREIVF--TSGAT   76 (404)
T ss_pred             EEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC------cCeEEE--eCCHH
Confidence            567777877778999999877663  1110  10      111124567788888886432      577988  99999


Q ss_pred             hHHHHHHHHHHH--hCCCCEEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283          113 GSLRLAAALIER--YFPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG  187 (410)
Q Consensus       113 ~a~~~~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~  187 (410)
                      +++.++...+..  +.+||.|++++++|+.+...+.   ..|++++.++.  ++++.+|++.+++.+++   ++++++++
T Consensus        77 ~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~--~~~g~~d~~~l~~~i~~---~t~lv~~~  151 (404)
T PRK14012         77 ESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDP--QSNGIIDLEKLEAAMRD---DTILVSIM  151 (404)
T ss_pred             HHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEcc--CCCCcCCHHHHHHhcCC---CCEEEEEE
Confidence            999987544422  3589999999999987755443   46888888887  34567899999999975   67788889


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM  267 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l  267 (410)
                      +++||||.+.   ++++|.++|+++|+++++|+++. ++..+.+     +    ...+.++++.|++|.+|++  ++|++
T Consensus       152 ~~~n~tG~~~---~~~~I~~la~~~g~~vivD~a~~-~g~~~~~-----~----~~~~~D~~~~s~~K~~gp~--g~G~l  216 (404)
T PRK14012        152 HVNNEIGVIQ---DIAAIGEICRERGIIFHVDAAQS-VGKVPID-----L----SKLKVDLMSFSAHKIYGPK--GIGAL  216 (404)
T ss_pred             CcCCCccchh---hHHHHHHHHHHcCCEEEEEcchh-cCCcccC-----c----ccCCCCEEEEehhhccCCC--ceEEE
Confidence            9999999955   56788888999999999999965 3321111     1    1223567778999988743  47888


Q ss_pred             EEEeCCchhHHHHHHHHHhh--ccCcccCCChhHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          268 NVVCSSSDLAARVKSQLKRL--ARPMYSNPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      ++  +++. ..++.......  .+....+.+.....+ ....+..   .   +....+..++.++.++++.+.|+ ++..
T Consensus       217 ~~--~~~~-~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~---~~~~~~~~~~~~~l~~~l~~~L~-~~~~  286 (404)
T PRK14012        217 YV--RRKP-RVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARI---A---KEEMATENERIRALRDRLWNGIK-DIEE  286 (404)
T ss_pred             EE--ecCC-CCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHH---H---HhhHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence            54  2222 11221110000  000111111221111 1111111   0   11234566777888888888887 6531


Q ss_pred             CCCccccc----C-CcceeeecC-CCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-C
Q 015283          345 GKDWSFIL----R-QIGMFSFTG-LNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-L  390 (410)
Q Consensus       345 ~~~~~~~~----~-~~~~~~~~~-~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~  390 (410)
                         +.+..    . ...++++.. .+.+.+...++  ++.+..+                         +  |+++.. .
T Consensus       287 ---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~  361 (404)
T PRK14012        287 ---VYLNGDLEQRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT  361 (404)
T ss_pred             ---EEEeCCccccCCCEEEEEEeCcCHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCC
Confidence               22211    1 112233333 23333333333  3332211                         2  898775 5


Q ss_pred             CcccHHHHHHHHHHHhhhc
Q 015283          391 SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~~  409 (410)
                      |++|++++++.|+++++.+
T Consensus       362 t~~dvd~~~~~l~~~~~~~  380 (404)
T PRK14012        362 TEEEIDYAIELVRKSIGKL  380 (404)
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            8999999999999987653

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.87  E-value=4.2e-20  Score=177.96  Aligned_cols=338  Identities=10%  Similarity=0.025  Sum_probs=196.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.......+  .+.....++.+.+++.....     ..+.+.+  +++|
T Consensus        33 ~~ylD~~~g~~~~~lGh~--~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f--~~sG  103 (420)
T TIGR00700        33 NRLIDFASGIAVLNIGHS--HPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS-----GPKKSVF--FNSG  103 (420)
T ss_pred             CEEEECccCHHhccCCCC--CHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC-----CCCEEEE--eCCc
Confidence            467888887542344554  58899988888754221222  12222345566666553211     1257888  8999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CC--------C-----CccceeeecC---------CCcccChh
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDP---------KTVGLDFE  168 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g--------~-----~~~~v~~~~~---------~~~~~d~~  168 (410)
                      ++|++.+.++.+.+....+|+....+|.+....... .+        .     .+..++..+.         ..+.-+++
T Consensus       104 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (420)
T TIGR00700       104 AEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELA  183 (420)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHH
Confidence            999999998888776657888888888665432221 11        0     1111222100         00001245


Q ss_pred             hHHHHHh--cCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          169 GMIADIK--AAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       169 ~l~~~i~--~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      .+++.+.  ..++...++++...+.-+|..++..+ +++|.++|++||+++|+||+|.+|+..+   ..+..... +..+
T Consensus       184 ~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~~a~~~~-~~~p  259 (420)
T TIGR00700       184 AARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AMFACEHE-GPEP  259 (420)
T ss_pred             HHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hhHHHhhc-CCCC
Confidence            5666653  22346677776667778888776665 9999999999999999999999987532   23332221 1222


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH---hCChhhHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEM  322 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~~~~  322 (410)
                      +   +.++||.++ +|+|+||+++   ++++.+.+..    .....+.+.+.+++.++...   +.++.+    .+..++
T Consensus       260 D---i~~lsK~l~-~G~pig~v~~---~~~i~~~~~~----~~~~~T~~~~pl~~aaa~a~l~~l~~~~~----~~~~~~  324 (420)
T TIGR00700       260 D---LITTAKSLA-DGLPLSGVTG---RAEIMDAPAP----GGLGGTYAGNPLACAAALAVLAIIESEGL----IERARQ  324 (420)
T ss_pred             C---EEEeecccc-CCcceEEEEe---cHHHHhhcCC----CCcCCCCCcCHHHHHHHHHHHHHHHhccH----HHHHHH
Confidence            3   346999999 8999999855   7775444321    12222334555666665333   333322    222333


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--------CHHHHHHhh---hcCcEEEcCCC------eE
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--------NKAQSDNMT---NKWHVYMTKDG------RI  385 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ll---~~~gi~v~~~g------Ri  385 (410)
                      ..+++++..+.+.   . +.+.   +....+. |.+.|+.+        +.+...++.   .++||.+.|++      ||
T Consensus       325 ~g~~l~~~L~~l~---~-~~~~---~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl  396 (420)
T TIGR00700       325 IGRLVTDRLTTLK---A-VDPR---IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRF  396 (420)
T ss_pred             HHHHHHHHHHHHH---h-hCCC---EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEE
Confidence            3333332222222   2 2221   2233344 55555432        122222222   35799999863      88


Q ss_pred             EecC-CCcccHHHHHHHHHHHhh
Q 015283          386 SLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       386 s~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      +++. .+++++++++++|.+++.
T Consensus       397 ~p~l~~~~~~l~~~~~~l~~~l~  419 (420)
T TIGR00700       397 LPPLTIGDELLSEGLDILCAILA  419 (420)
T ss_pred             ECCCCcCHHHHHHHHHHHHHHhh
Confidence            8764 589999999999999875

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.87  E-value=1.6e-19  Score=165.95  Aligned_cols=322  Identities=14%  Similarity=0.073  Sum_probs=210.8

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      |+.+++++|++++....-.+.+..|.  .-..+.++.+...+....     .+-+++  +.+||.+.+.+  +.+.+.||
T Consensus        12 GP~~v~~~V~~am~~~~~~h~s~~F~--~~~~~~~~~L~~v~~t~~-----~~~~ll--~gsGt~amEAa--v~sl~~pg   80 (383)
T COG0075          12 GPVPVPPRVLLAMARPMVGHRSPDFV--GIMKEVLEKLRKVFGTEN-----GDVVLL--SGSGTLAMEAA--VASLVEPG   80 (383)
T ss_pred             CCCCCCHHHHHHhcCCCCCCCCHHHH--HHHHHHHHHHHHHhcCCC-----CcEEEE--cCCcHHHHHHH--HHhccCCC
Confidence            55667899999887643222212221  223455666666544331     122344  78888989887  56667799


Q ss_pred             CEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          129 AKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       129 d~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      |+|++..-+..+  +.++++.+|++++.+..  +++..+|++++++.+++.++ ..++.+.+...+||+   .+++++|+
T Consensus        81 dkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~~~-~~~V~~vH~ETSTGv---lnpl~~I~  154 (383)
T COG0075          81 DKVLVVVNGKFGERFAEIAERYGAEVVVLEV--EWGEAVDPEEVEEALDKDPD-IKAVAVVHNETSTGV---LNPLKEIA  154 (383)
T ss_pred             CeEEEEeCChHHHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcCCC-ccEEEEEeccCcccc---cCcHHHHH
Confidence            999998865543  46789999999999987  57788999999999996443 444555677888999   66888999


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHH--
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQ--  283 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~--  283 (410)
                      ++|++||.++|+|.+ +.++..+.+.+.|+         -++++.+.=|.+ ++||+  |.+.+   +++..+++...  
T Consensus       155 ~~~k~~g~l~iVDaV-sS~Gg~~~~vd~wg---------iDv~itgSQK~l~~PPGl--a~v~~---S~~a~e~~~~~~~  219 (383)
T COG0075         155 KAAKEHGALLIVDAV-SSLGGEPLKVDEWG---------IDVAITGSQKALGAPPGL--AFVAV---SERALEAIEERKH  219 (383)
T ss_pred             HHHHHcCCEEEEEec-ccCCCcccchhhcC---------ccEEEecCchhccCCCcc--ceeEE---CHHHHHHHhcCCC
Confidence            999999999999999 77775544444443         345555666666 55675  66544   77766655421  


Q ss_pred             ----------HHhhcc-Cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          284 ----------LKRLAR-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       284 ----------~~~~~~-~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                                .+.... ..+. +|+.....++...|+.     ...+.++...++.+++...++++++ ++|+....+ .
T Consensus       220 ~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~-----i~~EGle~r~~RH~~~~~a~r~~~~-alGl~~~~~-~  292 (383)
T COG0075         220 PSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDL-----ILEEGLEARIARHRRLAEALRAGLE-ALGLELFAD-P  292 (383)
T ss_pred             CceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHH-----HHHhhHHHHHHHHHHHHHHHHHHHH-HcCCccccC-c
Confidence                      111111 2233 4444443443333331     1244568889999999999999999 999632110 0


Q ss_pred             cCCccee--eec--CCC-HHHHHHhhhcCcEEEcCCC--------eEE-ecCCCcccHHHHHHHHHHHhhhc
Q 015283          352 LRQIGMF--SFT--GLN-KAQSDNMTNKWHVYMTKDG--------RIS-LAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       352 ~~~~~~~--~~~--~~~-~~~~~~ll~~~gi~v~~~g--------Ris-~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ...+...  ++.  +.+ .+....+++++|+.+.+|.        ||+ ++..+..++..++.+|..++.++
T Consensus       293 ~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~  364 (383)
T COG0075         293 ERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL  364 (383)
T ss_pred             ccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence            0111111  122  333 3344478888899998872        997 55568899999999999998765

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.87  E-value=1.2e-20  Score=183.84  Aligned_cols=320  Identities=13%  Similarity=0.070  Sum_probs=194.0

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCC--cccHHHHHHHH---HHhcCCCCCcccCCceEEEecC
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKVTA---ELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~aia---~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      .+++++.|.+    .+. .+..+.++.....   ....|.+.  .-....++++.   +++....|.+  .+++.+  ++
T Consensus        69 ~~~~lg~g~~----~~~-~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~--~~~v~~--~~  136 (447)
T PRK00451         69 YPSFLGAGAY----DHY-IPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTGMD--VANASM--YD  136 (447)
T ss_pred             CcccCccccc----CCc-CcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCC--cceEEe--cC
Confidence            5678888886    322 2445544443221   11335441  11223444444   2334444443  457888  99


Q ss_pred             ChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhh----CCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEE
Q 015283          110 SGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL  184 (410)
Q Consensus       110 ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~i  184 (410)
                      ||+++++.+.  .+. ..+||+|+++++.|+.+...++.    .|.+++.+++.  ++ .+|++++++.+++   +++++
T Consensus       137 g~t~~~~~~~--~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~--~~-~~d~~~l~~~i~~---~t~~v  208 (447)
T PRK00451        137 GATALAEAAL--MAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE--DG-VTDLEALEAAVDD---DTAAV  208 (447)
T ss_pred             cHHHHHHHHH--HHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC--CC-CCCHHHHHHhcCC---CeEEE
Confidence            9999888763  333 35899999999999998877654    68899999873  34 7899999998874   67777


Q ss_pred             EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc--cccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe---cccccccc
Q 015283          185 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF--DVAYQGFASGSLDNDASSVRLFATRGMELLVAQ---SYSKNLGL  259 (410)
Q Consensus       185 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~--Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---S~sK~~~~  259 (410)
                      ++++| ||||.+   .++++|.++|+++|+++++  |.+..++...            ....+.+++++   +|||.+.+
T Consensus       209 ~l~~p-n~tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g~~~~------------~~~~~~D~~~~s~~k~~~~~~~  272 (447)
T PRK00451        209 VVQYP-NFFGVI---EDLEEIAEIAHAGGALFIVGVDPVSLGLLKP------------PGEYGADIVVGEGQPLGIPLSF  272 (447)
T ss_pred             EEECC-CCCCee---CCHHHHHHHHHHCCCEEEEEcChHHhccCCC------------cccCCCCEEEECCCcCCCCCCC
Confidence            87888 899996   4577888889999999988  5442211100            01223445555   67888888


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHH------------------------HHhhccCccc-CCChhHH-HHHHHHhCChhhH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQ------------------------LKRLARPMYS-NPPVHGA-RIVANVVGNPALF  313 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~-~~~~~~~-~~a~~~l~~~~~~  313 (410)
                      +|+|+||+++   ++++++.+...                        .+.. ..+.. ..+...+ .++...+...   
T Consensus       273 ~Gpg~G~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aaa~~l~~~---  345 (447)
T PRK00451        273 GGPYLGFFAT---RKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRRE-KATSNICTNQALNALAAAIYMSLL---  345 (447)
T ss_pred             CCCCchHHHh---hHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccc-cccccccccHHHHHHHHHHHHHHH---
Confidence            8999999854   66655442100                        0000 01111 1111112 1221111100   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeee--cC--CC-HHHHHHhhhcCcEEE-cCC-----
Q 015283          314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--TG--LN-KAQSDNMTNKWHVYM-TKD-----  382 (410)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--~~--~~-~~~~~~ll~~~gi~v-~~~-----  382 (410)
                        -.+.+++.++++.++++++.+.|+ +++.   +++.  .+++|.+  +.  .+ .++.++|++ +||.+ .++     
T Consensus       346 --~~~g~~~~~~~~~~~~~~l~~~L~-~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~~-~gi~~~~~~~~~~~  416 (447)
T PRK00451        346 --GPEGLRELAEQNHQKAHYLAERLA-EIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALLE-KGILGGYDLGRYYP  416 (447)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHHHh-hcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHHh-cCCCCCcccccccC
Confidence              023457888999999999999998 7752   3443  3344433  33  23 445667766 46653 111     


Q ss_pred             ---C--eEEecC-CCcccHHHHHHHHHHHh
Q 015283          383 ---G--RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       383 ---g--Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                         +  |+++.. .|+++++++++.|++++
T Consensus       417 ~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        417 ELGNHLLVCVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             CcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence               2  888753 38999999999999875

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.87  E-value=3.5e-20  Score=178.69  Aligned_cols=338  Identities=14%  Similarity=0.074  Sum_probs=204.8

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +...+|+..|..-...|+.  +|.+.+++.+++.... ..|.+..+..+|.+.+++.+..       .+.+.+  +++|+
T Consensus        49 G~~~lD~~~g~~~~~lGh~--~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~~~-------~~~v~~--~~sGs  116 (426)
T PRK00062         49 GNEYIDYVGSWGPMILGHA--HPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELVPS-------IEMVRM--VNSGT  116 (426)
T ss_pred             CCEEEEcccchhhhhcCCC--CHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCC-------CCEEEE--ecCHH
Confidence            3578999988753345664  5889988888886543 4455666677888888877421       357888  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCC------------CccceeeecCCCcccChhhHHHHHhcCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV------------PWSEYRYYDPKTVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~  179 (410)
                      +|++.+.++...+..+++|+..+++|.++...+.. .|.            ....++.....-.-.|++.+++.+.+..+
T Consensus       117 eA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~  196 (426)
T PRK00062        117 EATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGD  196 (426)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCC
Confidence            99999988776666678999999999887632221 110            00000000000001378888888865444


Q ss_pred             CcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          180 GSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      +..++++.....-+|.+.+ .+.+++|.++|++||+++|+||+|.++..+.    .+.... .+..++   +.++||.++
T Consensus       197 ~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~~~-~~~~pD---i~~~gK~l~  268 (426)
T PRK00062        197 EIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQGY-YGVTPD---LTTLGKIIG  268 (426)
T ss_pred             cEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHHHH-hCCCcc---hHhhhhHhh
Confidence            5666665544555888776 7779999999999999999999998875331    112211 122223   358999998


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh---CChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                       .|+++|+++.   ++++++.+.........+++ +.+...+.++...|   +++++       .++.++.....++.|.
T Consensus       269 -~G~p~ga~~~---~~~i~~~~~~~~~~~~~~T~-~~~p~~~aaa~a~L~~~~~~~~-------~~~~~~~~~~~~~~l~  336 (426)
T PRK00062        269 -GGLPVGAFGG---RREIMEQLAPLGPVYQAGTL-SGNPLAMAAGLATLKLLKEPGF-------YEELEALTKRLAEGLK  336 (426)
T ss_pred             -CCCcceeeeE---HHHHHHhhccCCCceecccC-cCCHHHHHHHHHHHHHHhcchH-------HHHHHHHHHHHHHHHH
Confidence             8899999744   77755554321011112222 33444444443333   33221       2333333344444444


Q ss_pred             HHhhhccCCCCCccc-ccCCcceeee-cCC------------C----HHHHHHhhhcCcEEEcCCC----eEEecCCCcc
Q 015283          336 DSLSAKDKSGKDWSF-ILRQIGMFSF-TGL------------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSLA  393 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~-~~~~~~~~~~-~~~------------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~~  393 (410)
                      +..+ +.+.    .. ..+.+.++.+ +..            +    ..+...+++ +||.+.+.+    |+++. ++++
T Consensus       337 ~~~~-~~~~----~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~Gv~v~~~~~~~~~~~~~-~t~~  409 (426)
T PRK00062        337 EAAK-KAGI----PLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLD-EGVYLAPSQFEAGFVSAA-HTDE  409 (426)
T ss_pred             HHHH-HcCC----ceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHH-CCeEeecCCcCceeeecc-CCHH
Confidence            4333 4442    22 2344444422 111            1    123445555 699998865    77754 4999


Q ss_pred             cHHHHHHHHHHHhhhc
Q 015283          394 KCEYLADAIIDSYHNV  409 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++|++++..+
T Consensus       410 ei~~~~~~l~~~l~~~  425 (426)
T PRK00062        410 DIEKTLEAARKAFAAL  425 (426)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999998764

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.87  E-value=1.1e-19  Score=165.39  Aligned_cols=327  Identities=15%  Similarity=0.131  Sum_probs=212.3

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ....|||..|.-....|+.  +|.+.+++.++.+.  .....|. .....++.+.+++... .      .+.+.+  .++
T Consensus        41 G~~YlDf~~Giav~~lGH~--hP~iv~al~~Q~~kl~h~sn~~~-~~~~~~la~~L~~~s~-~------~d~vff--~NS  108 (404)
T COG4992          41 GREYLDFAAGIAVNNLGHC--HPALVEALKEQAEKLWHVSNLFY-NEPQAELAEKLVELSP-F------ADRVFF--CNS  108 (404)
T ss_pred             CCEeeeeccceeeeccCCC--CHHHHHHHHHHHHHhhhcccccC-ChHHHHHHHHHHhhCc-c------ccEEEE--cCC
Confidence            3568999988775667775  69999999887744  2223342 2333455555555532 1      588999  999


Q ss_pred             hhhHHHHHHHHHHHhCC---CCEEEEcCCCCcchhh-------------hhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283          111 GTGSLRLAAALIERYFP---GAKVLISSPTWGNHKN-------------IFNDARVPWSEYRYYDPKTVGLDFEGMIADI  174 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~---gd~Vl~~~p~y~~~~~-------------~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i  174 (410)
                      |++|++.++++.+.+..   ..+|+...-+|.+..-             .+...=..+..+|+       -|++.+++++
T Consensus       109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai  181 (404)
T COG4992         109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAI  181 (404)
T ss_pred             cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHh
Confidence            99999999999988764   2477777766644322             11111112233333       3899999999


Q ss_pred             hcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283          175 KAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY  253 (410)
Q Consensus       175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  253 (410)
                      ++   .+..+++-..+-..|+..+..+ ++++.++|++||+++|.||++.+++-   ..+.|....+ +-.++++   ++
T Consensus       182 ~~---~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GR---TGk~fA~e~~-gV~PDI~---tl  251 (404)
T COG4992         182 DE---DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGR---TGKLFAYEHY-GVEPDIL---TL  251 (404)
T ss_pred             cc---CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCc---cchHHHHHHh-CCCCCEE---Ee
Confidence            87   7888888888999999887777 99999999999999999999999883   3455544333 2233555   68


Q ss_pred             cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      .|.+| .|+.+|.+..   +++.    ...+......++.+.+.++..++   ...+.++           ...++.+++
T Consensus       252 aK~Lg-GG~PigA~la---~~~~----~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e-----------~ll~~v~~~  312 (404)
T COG4992         252 AKALG-GGFPIGAMLA---TEEI----ASAFTPGDHGSTFGGNPLACAVALAVLEVLLEE-----------GLLENVREK  312 (404)
T ss_pred             ecccc-CCccceeeEE---chhh----hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcch-----------hHHHHHHHH
Confidence            99999 7899999844   4442    22232222222333444444443   4444444           334556666


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCC--C---HHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLAD  400 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~---~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~  400 (410)
                      .+++.+.|+ ++..+.++....+.-|.++=+.+  +   .+.+..+.+ .|+.+.+.|    ||..+- +++++++++++
T Consensus       313 g~~~~~~L~-~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~-~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~  390 (404)
T COG4992         313 GEYLLQRLR-ELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALRE-EGVLVLPAGPNVIRFLPPLVITEEEIDEALD  390 (404)
T ss_pred             HHHHHHHHH-HHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHH-CCeEEecCCCCeEEecCCccCCHHHHHHHHH
Confidence            666777776 65422111122234454433333  2   445666665 599998876    887553 59999999999


Q ss_pred             HHHHHhhhc
Q 015283          401 AIIDSYHNV  409 (410)
Q Consensus       401 ~l~~~l~~~  409 (410)
                      +|++++...
T Consensus       391 ~l~~~l~~~  399 (404)
T COG4992         391 ALERALAAA  399 (404)
T ss_pred             HHHHHHHHh
Confidence            999998753

>PLN02624 ornithine-delta-aminotransferase

Probab=99.87  E-value=1.3e-19  Score=176.39  Aligned_cols=332  Identities=11%  Similarity=0.057  Sum_probs=197.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+.+... +...+.......++.+.+++++ .       .+.+.+  +++|+
T Consensus        75 ~~ylD~~sg~~~~~~Gh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~-~-------~~~~~f--~~SGs  142 (474)
T PLN02624         75 KKYLDFLSAYSAVNQGHC--HPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF-G-------YDMVLP--MNTGA  142 (474)
T ss_pred             CEEEEcccchhcccCCCC--CHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc-C-------CCeEEE--eCChH
Confidence            356777766432233443  689999988887542 1111123344567777777763 1       257888  89999


Q ss_pred             hHHHHHHHHHHHhC-------CCC-EEEEcCCCCcchhhh-hhhCCC------------CccceeeecCCCcccChhhHH
Q 015283          113 GSLRLAAALIERYF-------PGA-KVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus       113 ~a~~~~~~~~~~~~-------~gd-~Vl~~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~~~~~d~~~l~  171 (410)
                      +|++.+.++.+.+.       +++ .|+...-+|.+.... +...+-            .+..++.       .|++.++
T Consensus       143 eA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~  215 (474)
T PLN02624        143 EGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALE  215 (474)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHH
Confidence            99999988776542       133 566666666554221 211110            1111221       2678888


Q ss_pred             HHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          172 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      +.++..+++..++++.+++|++|.+++.++ +++|.++|++||+++|+||+|.+++..   ...+.... ....++++  
T Consensus       216 ~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Grt---G~~~a~~~-~~i~pDiv--  289 (474)
T PLN02624        216 KIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLART---GKMLACDW-EEVRPDVV--  289 (474)
T ss_pred             HHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcC---cchhhHHh-cCCCCCEE--
Confidence            888765556788888999999999988776 999999999999999999999887643   22222211 12223333  


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                       ++||.+|.+++++|++++   ++++.+.+    .......+.+.+.+++.++...|+.  +.    +  ....+++.++
T Consensus       290 -~lsK~lggG~~pigav~~---~~~i~~~~----~~~~~~~T~~g~pl~~aaa~aaLe~--l~----~--~~l~~~~~~~  353 (474)
T PLN02624        290 -ILGKALGGGVIPVSAVLA---DKDVMLCI----KPGEHGSTFGGNPLASAVAMAALQV--VQ----D--EKLAERSAKL  353 (474)
T ss_pred             -EecccccCCCCcceeeee---cHHHHhHh----ccCCcCCCCCCCHHHHHHHHHHHHH--HH----h--chHHHHHHHH
Confidence             468999977799999854   66644433    2222222223455555555444431  10    0  1223344444


Q ss_pred             HHHHHHHhhhccCC--CCCcccccCCcceee-ecCCC-------HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccH
Q 015283          331 RQKLFDSLSAKDKS--GKDWSFILRQIGMFS-FTGLN-------KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKC  395 (410)
Q Consensus       331 ~~~l~~~l~~~~g~--~~~~~~~~~~~~~~~-~~~~~-------~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i  395 (410)
                      .+.+.+.|. ++..  +..+....+.+.++. +++..       .++...+ .++||++.|++    ||+++ ..+++++
T Consensus       354 ~~~l~~~L~-~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L-~e~GV~v~p~~~~~lR~~p~l~~t~e~i  431 (474)
T PLN02624        354 GQELRDQLQ-KIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKL-KERGLLAKPTHDTIIRLAPPLSISEDEL  431 (474)
T ss_pred             HHHHHHHHH-HHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHH-HhCCeEEecCCCCEEEEECCccCCHHHH
Confidence            455555554 4321  001222334444443 33321       1334555 45799999875    88753 3599999


Q ss_pred             HHHHHHHHHHhhh
Q 015283          396 EYLADAIIDSYHN  408 (410)
Q Consensus       396 ~~~~~~l~~~l~~  408 (410)
                      ++++++|++++.+
T Consensus       432 d~~l~~L~~~l~~  444 (474)
T PLN02624        432 QECSKALSDVLEH  444 (474)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998754

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.87  E-value=5.7e-20  Score=174.45  Aligned_cols=320  Identities=12%  Similarity=0.031  Sum_probs=195.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .++++|+.++||....+    |.++++..+++.. +.     ...++...-+.+|.+.+++++..        +..++  
T Consensus       102 r~~l~FsSndYLGL~~~----p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~--------e~all--  167 (476)
T PLN02955        102 KKLLLFSGNDYLGLSSH----PTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK--------EDCLV--  167 (476)
T ss_pred             ceEEEeeccCccCCCCC----HHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC--------CcEEE--
Confidence            36799999999766655    5555555444422 11     01111122347899999999633        33444  


Q ss_pred             cCChhhHHHHHHHHHHH------------hCCCCEEEEcCCCCcchhhhhhhC----CCCccceeeecCCCcccChhhHH
Q 015283          108 GLSGTGSLRLAAALIER------------YFPGAKVLISSPTWGNHKNIFNDA----RVPWSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~------------~~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~  171 (410)
                      .++|..|+..++..+..            ..++|.|+...-.|.+....++..    ++++..+++       .|+++|+
T Consensus       168 ~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le  240 (476)
T PLN02955        168 CPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLN  240 (476)
T ss_pred             ECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHH
Confidence            47787777766433311            124567777777888887777655    456666665       3889999


Q ss_pred             HHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          172 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      +.++..+.+..++++....+++|.+.+   +++|.++|++||.++|+||+|..+..+.....  ....+.-..+.+++++
T Consensus       241 ~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G--~~e~~g~~~di~ii~~  315 (476)
T PLN02955        241 SLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGG--VAEEFNCEADVDLCVG  315 (476)
T ss_pred             HHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCc--HHHHhCCCCCCcEEEE
Confidence            988765555667777778999999776   66666668999999999999887766531111  1112222346789999


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH--HHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ||||++|..|   |++   ++++++++.+......+.+++ ..++..+..+.  ...+..+          ...++++++
T Consensus       316 TLsKA~G~~G---Gfi---~gs~~~~~~l~~~~~~~ifSt-alpp~~aaa~laal~l~~~~----------~~~r~~L~~  378 (476)
T PLN02955        316 TLSKAAGCHG---GFI---ACSKKWKQLIQSRGRSFIFST-AIPVPMAAAAYAAVVVARKE----------KWRRKAIWE  378 (476)
T ss_pred             eCccchhccC---cee---ecHHHHHHHHHHhCCCCeecc-cccHHHHHHHHHHHHHHhcC----------HHHHHHHHH
Confidence            9999987665   885   347776665554333332222 22222222221  2222211          245567777


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCccee-eecCCC---HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcc
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLA  393 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~---~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~  393 (410)
                      +.+++.+.    .|    +..   .+.++ ++++..   .++.++|++ .||++.+-       |    ||++.. .+++
T Consensus       379 n~~~fr~~----~G----~~~---~sPI~pI~ig~~~~a~~~~~~L~~-~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~e  446 (476)
T PLN02955        379 RVKEFKAL----SG----VDI---SSPIISLVVGNQEKALKASRYLLK-SGFHVMAIRPPTVPPNSCRLRVTLSAAHTTE  446 (476)
T ss_pred             HHHHHHHh----cC----CCC---CCCEEEEEeCCHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCceEEEeeCCCCCHH
Confidence            77777652    23    222   12233 444542   233556665 69998542       2    888765 5999


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      ||+++++.|+++...
T Consensus       447 dId~lv~~L~~~~~~  461 (476)
T PLN02955        447 DVKKLITALSSCLDF  461 (476)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999987643

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.87  E-value=7.6e-20  Score=175.79  Aligned_cols=334  Identities=11%  Similarity=0.069  Sum_probs=195.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++.......+.  +..-..++.+.+++.....     ..+.+.+  +++|
T Consensus        40 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~~~f--~~sG  110 (421)
T PRK09792         40 NEYIDFAAGIAVLNTGHR--HPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVS-----GQAKTAF--FTTG  110 (421)
T ss_pred             CEEEEccCchhhhcCCCC--CHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCC-----CCceEEE--eCCh
Confidence            467888777542344554  588888888877542212221  2222235555555542111     1257888  8899


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCC-------------CccceeeecCCCc---ccChhhHHHHH
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYDPKTV---GLDFEGMIADI  174 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~~~~~---~~d~~~l~~~i  174 (410)
                      ++|++.+.++.+.+....+|+....+|.+.... +...|.             .+..+|.......   .-+++.+++.+
T Consensus       111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~  190 (421)
T PRK09792        111 AEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLF  190 (421)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHH
Confidence            999999988887765556888888877665321 111111             1222222111100   01346777777


Q ss_pred             hc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          175 KA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       175 ~~--~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      .+  .+++..++++...++|+|..+ +.+.+++|.++|++||+++|+||++.+|+..   ...+....+ ...++   +.
T Consensus       191 ~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---G~~~a~~~~-~~~pD---i~  263 (421)
T PRK09792        191 KSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFART---GKLFAMDHY-ADKPD---LM  263 (421)
T ss_pred             HhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC---CchhHHHhc-CCCCc---EE
Confidence            63  123456666666699999876 7888999999999999999999999998753   233443333 22223   46


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +|||.++ +|+|+||+++   ++++.+.+..    .....+...+.+++.++   ...+++++           ..++++
T Consensus       264 t~gK~l~-~G~pigav~~---~~~i~~~~~~----~~~~~T~~gnpl~~aaa~a~l~~l~~~~-----------~~~~~~  324 (421)
T PRK09792        264 TMAKSLA-GGMPLSGVVG---NANIMDAPAP----GGLGGTYAGNPLAVAAAHAVLNIIDKES-----------LCERAN  324 (421)
T ss_pred             Eeehhhc-CCCceEEEEE---cHHHHhccCC----CCcCCCCCCCHHHHHHHHHHHHHHHhhh-----------HHHHHH
Confidence            8999998 8999999755   7775444321    11222224445555543   33443332           222233


Q ss_pred             HHHHHHHHHhh---hccCCCCCcccccCCcceeeecCCC------------HHHHHHhhhcCcEEEcCCC------eEEe
Q 015283          329 NVRQKLFDSLS---AKDKSGKDWSFILRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG------RISL  387 (410)
Q Consensus       329 ~~~~~l~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ll~~~gi~v~~~g------Ris~  387 (410)
                      +..+++.+.|+   ++.+    ........|.+.|+.+.            ..+..++++ +||.+.+.|      ||.+
T Consensus       325 ~~g~~l~~~l~~l~~~~p----~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~g~~~~~irl~P  399 (421)
T PRK09792        325 QLGQRLKNTLIDAKESVP----AIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLTCGAYGNVIRFLY  399 (421)
T ss_pred             HHHHHHHHHHHHHHHhCC----CcceecccceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEeecCCCCCEEEEeC
Confidence            33333333333   0233    11122233777776541            123445555 699986532      7876


Q ss_pred             cC-CCcccHHHHHHHHHHHhh
Q 015283          388 AG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       388 ~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      +. ++++++++++++|.+++.
T Consensus       400 ~l~i~~~ei~~~~~~l~~~l~  420 (421)
T PRK09792        400 PLTIPDAQFDAAMKILQDALS  420 (421)
T ss_pred             CCcCCHHHHHHHHHHHHHHHh
Confidence            65 699999999999999875

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.87  E-value=1.4e-19  Score=172.25  Aligned_cols=216  Identities=14%  Similarity=0.075  Sum_probs=143.5

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh----CCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----ARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~----~g~  150 (410)
                      +.....+|++.+++++..       ++.++   +++|+.++..+  +...+.+||+|+++.|.|+.....+..    .|.
T Consensus        59 ~~pt~~~Le~~lA~l~G~-------~~al~---~~sG~~Ai~~~--l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi  126 (386)
T PRK06767         59 GNPTVKLFEERMAVLEGG-------EEALA---FGSGMAAISAT--LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI  126 (386)
T ss_pred             CCcchHHHHHHHHHHhCC-------CcEEE---ECCHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence            455678999999999642       34454   47788888776  444577999999999999876655543    333


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++.       .|++.+++.+.+   +++++++++|+||||.+.+   +++|.++|+++|+++|+|++|......  
T Consensus       127 ~~~~~~~-------~d~~~l~~~i~~---~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~--  191 (386)
T PRK06767        127 THSFCDM-------ETEADIENKIRP---NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ--  191 (386)
T ss_pred             EEEEeCC-------CCHHHHHHhhCc---CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence            3332222       378888888864   6778888999999999776   567777799999999999998643321  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                       .   ++     ....++++.|+||.++.+|.++ ||++.   +++.++++........   ....+...+.++...|+.
T Consensus       192 -~---pl-----~~g~Div~~S~sK~l~g~g~~~gG~v~~---~~~~i~~~~~~~~~~~---g~~~~~~~a~l~~~~L~t  256 (386)
T PRK06767        192 -R---PL-----ELGCDAVVHSATKYIGGHGDVVAGVTIC---KTRALAEKIRPMRKDI---GGIMAPFDAWLLLRGLKT  256 (386)
T ss_pred             -C---ch-----hcCCcEEEecCcceecCCCCceeEEEEe---ChHHHHHHHHHHHHHh---CCCCCHHHHHHHHcCCCc
Confidence             1   11     1134688899999998889886 77633   6666655544333221   122233333333333332


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .          ....++.+++...+.+.|+ +.+
T Consensus       257 l----------~~r~~~~~~~a~~la~~L~-~~p  279 (386)
T PRK06767        257 L----------AVRMDRHCDNAEKIVSFLK-NHD  279 (386)
T ss_pred             H----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence            2          3444566778888888888 764

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.86  E-value=5.6e-20  Score=173.59  Aligned_cols=276  Identities=16%  Similarity=0.111  Sum_probs=177.4

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----h
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~  146 (410)
                      .+| +.....+|+++++++. .       ++.++   +.+|+.++..+  +...+.+||+|+++.|+|..+...+    .
T Consensus        46 ~ry-~~p~~~~Le~~lA~l~-~-------~~~v~---~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~  111 (366)
T PRK07582         46 GRA-SNPTWRALEAALGELE-G-------AEALV---FPSGMAAITAV--LRALLRPGDTVVVPADGYYQVRALAREYLA  111 (366)
T ss_pred             ECC-CCccHHHHHHHHHHHc-C-------CCEEE---ECCHHHHHHHH--HHHhcCCCCEEEEeCCCcHhHHHHHHHHHh
Confidence            445 6678899999999995 2       34454   47888888877  4445789999999999998886644    4


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.+++.++..+.      .+    .+.   +++.++++++|+||||.+   .++++|+++|+++|+++|+|++|....
T Consensus       112 ~~G~~v~~v~~~~~------~~----~~~---~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~  175 (366)
T PRK07582        112 PLGVTVREAPTAGM------AE----AAL---AGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL  175 (366)
T ss_pred             cCeEEEEEECCCCh------HH----Hhc---cCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc
Confidence            57888888876211      11    122   256777789999999974   467888888999999999999985322


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                       +   ..  ++    +. ..+++++|+||.+ |.+|+|+||+  +++++++++++.....    .....++...+..+..
T Consensus       176 -~---~~--p~----~~-g~Divv~S~sK~l~G~~g~~~G~v--~~~~~~l~~~l~~~~~----~~g~~~~~~~a~l~~r  238 (366)
T PRK07582        176 -G---QR--PL----EL-GADLVVASDTKALTGHSDLLLGYV--AGRDPELMAAVERWRL----LAGAIPGPFEAWLAHR  238 (366)
T ss_pred             -c---cC--ch----hc-CCcEEEecccccccCCCCeeEEEE--EcCcHHHHHHHHHHHH----HhCCCCCHHHHHHHHh
Confidence             1   11  11    11 2357889999998 4577999997  4456676666554322    2233445555555555


Q ss_pred             HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc----ccC-----------Ccceeeec-CCCHHHHH
Q 015283          306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF----ILR-----------QIGMFSFT-GLNKAQSD  369 (410)
Q Consensus       306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~~~-----------~~~~~~~~-~~~~~~~~  369 (410)
                      .|+..+          ...++..++...+.+.|+ +.+.-..+.+    ..|           .+|++.|. + +.+.+.
T Consensus       239 ~l~tl~----------~R~~~~~~na~~la~~L~-~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~  306 (366)
T PRK07582        239 SLGTLG----------LRFARQCANALAVAELLA-GHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAE  306 (366)
T ss_pred             ccccHH----------HHHHHHHHHHHHHHHHHH-hCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHH
Confidence            555432          223455567777777776 5542110110    011           34555432 2 555566


Q ss_pred             HhhhcCcEEEc-C--------------------CC--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          370 NMTNKWHVYMT-K--------------------DG--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       370 ~ll~~~gi~v~-~--------------------~g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +++++.++... +                    .+  |+|++-   |+.+.+++.|.++++.
T Consensus       307 ~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~  365 (366)
T PRK07582        307 RFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA  365 (366)
T ss_pred             HHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence            66666565442 1                    12  889854   7889999999988875

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.86  E-value=2e-19  Score=174.55  Aligned_cols=340  Identities=13%  Similarity=0.077  Sum_probs=190.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++........  ....-..++.+.+++.+....     .+.+.+  +++|
T Consensus        54 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~-----~~~v~f--~~sG  124 (451)
T PRK06918         54 NQYIDFAGAIGTINVGHS--HPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSF-----DKKVLF--LNSG  124 (451)
T ss_pred             CEEEEcCCchhhcCCCCC--CHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCC-----CCEEEE--cCCc
Confidence            457888777542344554  58899998888754221111  112223455555555532211     257899  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCC-------------CccceeeecC--CCcccC--------h
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV-------------PWSEYRYYDP--KTVGLD--------F  167 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~--~~~~~d--------~  167 (410)
                      ++|++.+.++.+.+....+|+....+|.+...... ..+.             .+..+|..+.  ......        +
T Consensus       125 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (451)
T PRK06918        125 AEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMI  204 (451)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHH
Confidence            99999999988877655788888888866543222 1110             1112222100  000110        1


Q ss_pred             hhHHHHHhc--CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          168 EGMIADIKA--APGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       168 ~~l~~~i~~--~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      +.+++.+..  .++...++++...+...|.+++.++ +++|.++|++||+++|+||+|.+|+..+   ..+....+ +..
T Consensus       205 ~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g---~~~a~~~~-~v~  280 (451)
T PRK06918        205 EEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG---KYFAIEHF-DVV  280 (451)
T ss_pred             HHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC---ceehhHhc-CCC
Confidence            223333321  1234555554433444476565555 9999999999999999999999997532   23333222 212


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh---CChhhHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEME  321 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~  321 (410)
                      ++   +.|+||.++ +|+|+||+++   ++++.+.+    .......+.+.+.+++.++...|   .++.+    .++.+
T Consensus       281 pD---i~t~sK~l~-~G~pig~v~~---~~~i~~~~----~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~----~~~~~  345 (451)
T PRK06918        281 PD---LITVSKSLG-AGVPISGVIG---RKEIMDES----APGELGGTYAGSPLGCAAALAVLDIIEKENL----NDRAI  345 (451)
T ss_pred             CC---EEeeehhhc-CCCccEEEEE---cHHHHhcc----CCCCcCcCCCcCHHHHHHHHHHHHHHHHCCH----HHHHH
Confidence            33   448999999 8999999855   67744443    22222233345666666644333   33322    22233


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-------C-CHHH----HHHhhhcCcEEEcCCC------
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------L-NKAQ----SDNMTNKWHVYMTKDG------  383 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-------~-~~~~----~~~ll~~~gi~v~~~g------  383 (410)
                      +..+.+.+..+.+.+    +.+.   +....+.++++.|.-       . +...    ...+ .++||.+.|++      
T Consensus       346 ~~g~~l~~~l~~l~~----~~~~---~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~~~~l  417 (451)
T PRK06918        346 ELGKVVMNRFEEMKN----KYNC---IGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTYGNVI  417 (451)
T ss_pred             HHHHHHHHHHHHHHh----hCCC---ceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCCCCEE
Confidence            333333332222221    1221   122445666665431       1 1222    2333 45799998863      


Q ss_pred             eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          384 RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ||+++. ++++++++++++|.+++..+
T Consensus       418 rl~p~l~~t~~~id~~l~~l~~~l~~~  444 (451)
T PRK06918        418 RVLMPLVITDEQLEEGLTIIEESLQAC  444 (451)
T ss_pred             EEECCCccCHHHHHHHHHHHHHHHHHH
Confidence            888765 68999999999999998653

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.86  E-value=2.7e-19  Score=171.93  Aligned_cols=330  Identities=9%  Similarity=0.054  Sum_probs=202.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+.+|..-...|+.  +|.+.+++.+.+... +...........++.+.+++++    +    .+.+.+  +++|+
T Consensus        37 ~~~lD~~s~~~~~~~Gh~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~SGs  104 (401)
T TIGR01885        37 KRYLDFLSAYSAVNQGHC--HPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLP--MNTGA  104 (401)
T ss_pred             CEEEEcccCHhhccCCCC--CHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEE--eCccH
Confidence            567899887431123333  688888888776431 1111112334456777777764    2    257788  89999


Q ss_pred             hHHHHHHHHHHHh-------CCC-CEEEEcCCCCcch-hhhhhhCC---------C---CccceeeecCCCcccChhhHH
Q 015283          113 GSLRLAAALIERY-------FPG-AKVLISSPTWGNH-KNIFNDAR---------V---PWSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus       113 ~a~~~~~~~~~~~-------~~g-d~Vl~~~p~y~~~-~~~~~~~g---------~---~~~~v~~~~~~~~~~d~~~l~  171 (410)
                      +|++.+.++.+.+       .+| +.|+....+|.+. ...+...|         .   .+..++.       .|++.++
T Consensus       105 ~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le  177 (401)
T TIGR01885       105 EAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALE  177 (401)
T ss_pred             HHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHH
Confidence            9999997776554       133 5677777776543 33333222         1   1222222       2688898


Q ss_pred             HHHhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          172 ADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      +.+++.+++..++++.++++++|.+.+.+ .+++|.++|++||+++|+||+|.+++..+   ..+.. ......++++  
T Consensus       178 ~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G---~~~~~-~~~~~~~di~--  251 (401)
T TIGR01885       178 EALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG---KLLCV-DHENVKPDIV--  251 (401)
T ss_pred             HHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHH-hhcCCCCCEE--
Confidence            88865445667777788899999988755 59999999999999999999998776432   22222 1112223443  


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                       ++||.++.+|+|+||++.   ++++++.+...   ....++ +.+..++.++...|+..      .+  +...++.+++
T Consensus       252 -~~gK~l~~g~~~ig~v~~---~~~i~~~~~~~---~~~~t~-~~~p~~~~aa~a~L~~i------~~--~~l~~~~~~~  315 (401)
T TIGR01885       252 -LLGKALSGGVYPVSAVLA---DDDVMLTIKPG---EHGSTY-GGNPLACAVAVAALEVL------EE--EKLAENAEKL  315 (401)
T ss_pred             -EeeccccCCCCCcEEEEE---cHHHHhhccCC---CCCCCC-CCCHHHHHHHHHHHHHH------Hh--ccHHHHHHHH
Confidence             467999876699999754   77755544321   112222 33454555554444311      11  1344567777


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceee-ecCCC------HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFS-FTGLN------KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYL  398 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~------~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~  398 (410)
                      .+++.+.|+ +++.+ .+....+.+.++. +++.+      .++..++. ++||.+.|.+    ||+.. ..++++++++
T Consensus       316 ~~~~~~~L~-~l~~~-~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~  392 (401)
T TIGR01885       316 GEIFRDQLK-KLPKP-IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPTHGNIIRLAPPLVITEEQLDEG  392 (401)
T ss_pred             HHHHHHHHH-hccCC-ceeEEeecCeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEecCCCEEEEeCCccCCHHHHHHH
Confidence            888999998 77521 1122234444443 34332      23455555 4699998864    88764 3599999999


Q ss_pred             HHHHHHHhh
Q 015283          399 ADAIIDSYH  407 (410)
Q Consensus       399 ~~~l~~~l~  407 (410)
                      +++|++++.
T Consensus       393 l~~l~~~l~  401 (401)
T TIGR01885       393 LEIIKKVID  401 (401)
T ss_pred             HHHHHHHhC
Confidence            999998763

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK06460 hypothetical protein; Provisional

Probab=99.86  E-value=8.7e-20  Score=172.78  Aligned_cols=215  Identities=14%  Similarity=0.068  Sum_probs=141.8

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCc----chhhhhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWG----NHKNIFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~----~~~~~~~~~g~  150 (410)
                      ......++++++++++...       ..+++   ++|++++..+  +...+.+||+|+++.|.|+    .+...++..|.
T Consensus        43 ~~p~~~~L~~~lA~l~g~~-------~~v~~---~sG~~ai~~~--l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~  110 (376)
T PRK06460         43 ANPTVLELTKKIVELENAE-------MGVAF---SSGMGAISTT--ALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGV  110 (376)
T ss_pred             CCccHHHHHHHHHHHhCCC-------cEEEe---CCHHHHHHHH--HHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCc
Confidence            4567889999999996432       34544   7778888877  3444779999999986553    44566777888


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++..       +.+.+++.+.   ++++++++++|+||||.+++.+   +|+++|+++|+++|+|++|......  
T Consensus       111 ~v~~~~~~-------~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~~--  175 (376)
T PRK06460        111 NVDASNPG-------SDNIIEKAKS---KRYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPINQ--  175 (376)
T ss_pred             EEEEECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCccccC--
Confidence            87776641       2233333333   3677888899999999988876   5677799999999999998754211  


Q ss_pred             CCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                        .  .   +  ..+.++++.|+||.++.. +.++||++.   ++++++++.....    ....+.+..   .+...++.
T Consensus       176 --~--~---l--~~~~divv~S~sK~l~G~~~~~~G~~~~---~~~l~~~l~~~~~----~~g~~~~~~---~a~~~l~~  236 (376)
T PRK06460        176 --K--P---L--ELGADIVVHSASKFLAGHNDVIAGLAAG---YGKLLNVIDQMRR----TLGTSLDPH---AAYLTLRG  236 (376)
T ss_pred             --C--h---h--hcCCCEEEeecceeccCCCCceEEEEec---CHHHHHHHHHHHH----hcCCCCCHH---HHHHHHhc
Confidence              1  1   1  113579999999998522 357899643   7786666654332    112222322   22222333


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .+       .++...++..+++..+.+.|+ +.+
T Consensus       237 ~~-------~l~~r~~~~~~n~~~l~~~L~-~~p  262 (376)
T PRK06460        237 IK-------TLKIRMDVINRNAEQIAEFLE-GHP  262 (376)
T ss_pred             hh-------hHHHHHHHHHHHHHHHHHHHH-cCC
Confidence            22       235666778888888988888 664

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.86  E-value=1.2e-19  Score=172.77  Aligned_cols=216  Identities=18%  Similarity=0.160  Sum_probs=147.0

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~  150 (410)
                      +.....++++.++++...        +..++  +++|++|+..+  +...+.+||+|+++.|+|++....    +...|+
T Consensus        62 ~~p~~~~le~~lA~l~g~--------~~~i~--~ssG~~Ai~~~--l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi  129 (398)
T PRK08249         62 TNPTVQAFEEKVRILEGA--------EAATA--FSTGMAAISNT--LYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGV  129 (398)
T ss_pred             CChHHHHHHHHHHHHhCC--------CeEEE--eCChHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCe
Confidence            455678999999999643        23344  58888888887  444577999999999999876443    446677


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++.       .|++.+++.+++   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|..+...  
T Consensus       130 ~v~~vd~-------~d~e~l~~~i~~---~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~--  194 (398)
T PRK08249        130 DVTLCET-------GDHEQIEAEIAK---GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ--  194 (398)
T ss_pred             EEEEcCC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC--
Confidence            7666543       488999998875   6788888999999999876   556777799999999999998865422  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                        .  ++    . ....++++|+||.++.+|.++|++  ++.++++++++.....    ......+...+.++...++. 
T Consensus       195 --~--~l----~-~~~Divv~S~sK~l~g~~~~~gG~--vv~~~~l~~~l~~~~~----~~g~~~s~~~a~l~l~~l~t-  258 (398)
T PRK08249        195 --N--PL----A-LGADLVIHSATKFLSGHADALGGV--VCGSKELMEQVYHYRE----INGATMDPMSAYLILRGMKT-  258 (398)
T ss_pred             --C--ch----h-hCCCEEeccCceecCCCCCceEEE--EECCHHHHHHHHHHHH----hcCCCCCHHHHHHHHhCcch-
Confidence              1  11    1 123478899999998778777554  3447776666654322    12223444443434333332 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                               +....++..+++..+.+.|+ +.+
T Consensus       259 ---------L~~R~~~~~~na~~la~~L~-~~p  281 (398)
T PRK08249        259 ---------LKLRVRQQQESAMALAKYLQ-THP  281 (398)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence                     23334555667777777777 654

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.86  E-value=2.5e-19  Score=169.71  Aligned_cols=222  Identities=13%  Similarity=0.080  Sum_probs=147.5

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CC
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR  149 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g  149 (410)
                      .+| +.....+++++++++..        .+++++  ++||++++.++.  ...+.+||+|+++.|+|+.....+.. .+
T Consensus        46 ~R~-~~p~~~~le~~lA~l~g--------~~~v~~--~~gg~~Ai~~~l--~all~~GD~Vl~~~p~y~~~~~~~~~~~~  112 (382)
T TIGR02080        46 SRS-GNPTRDLLQQALAELEG--------GAGAVV--TNTGMSAIHLVT--TALLGPDDLLVAPHDCYGGTYRLLNALAK  112 (382)
T ss_pred             cCC-CCchHHHHHHHHHHHhC--------CCcEEE--EcCHHHHHHHHH--HHHcCCCCEEEEcCCCcHHHHHHHHHHHh
Confidence            555 45567899999999853        246777  899999999983  44478999999999999876554432 22


Q ss_pred             CCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC
Q 015283          150 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS  229 (410)
Q Consensus       150 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~  229 (410)
                      .....+...+.    .|++.+++.+++   +++++++++|+||||.+++   +++|+++|+++|+++|+|++|..+... 
T Consensus       113 ~~~~~v~~~d~----~d~~~l~~ai~~---~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~-  181 (382)
T TIGR02080       113 KGCFRVLFVDQ----GDEQALRAALAQ---KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ-  181 (382)
T ss_pred             hcCeEEEEECC----CCHHHHHHhcCc---CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence            22233333221    378889888875   6788888999999999876   456777799999999999999765421 


Q ss_pred             CCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283          230 LDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~  308 (410)
                         .  ++ .   . ..+++++|+||.++ .+|++.|++  +++++++++++.....    ......+.+.+..+...++
T Consensus       182 ---~--pl-~---~-gaDivv~S~sK~l~G~~~~~~G~i--~~~~~~~~~~l~~~~~----~~g~~~sp~~a~l~lr~l~  245 (382)
T TIGR02080       182 ---N--PL-A---L-GADLVLHSCTKYLNGHSDVIAGAV--IAKDPQVAEELAWWAN----NLGVTGGAFDSYLTLRGLR  245 (382)
T ss_pred             ---C--ch-h---h-CCCEEEeecceeccCCCCceeEEE--EeCCHHHHHHHHHHHH----ccCCCCCHHHHHHHHcccc
Confidence               1  11 1   1 23588899999885 577889997  4556776666543222    1222344444333333333


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .          +....++..++...+.+.|+ ..+
T Consensus       246 t----------l~~R~~~~~~na~~~a~~L~-~~p  269 (382)
T TIGR02080       246 T----------LVARMRLQQRNAQAIVEYLQ-TQP  269 (382)
T ss_pred             h----------HHHHHHHHHHHHHHHHHHHH-hCC
Confidence            2          22334455567777777776 554

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.86  E-value=1.5e-19  Score=173.70  Aligned_cols=340  Identities=13%  Similarity=0.066  Sum_probs=206.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++.......+  .+.....++.+.+++.....     ..+.+.+  +++|
T Consensus        40 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~~~f--~~sG  110 (421)
T PRK06777         40 REYIDFAAGIAVLNTGHR--HPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPID-----GPAKTAF--FTTG  110 (421)
T ss_pred             CEEEEcccCHHhhccCCC--CHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCC-----CCceEEE--eCCc
Confidence            467888777532234554  58888888888755321222  12233345666666553211     1357888  8999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCC-------------ccceeeecCCC---cccChhhHHHHH
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVP-------------WSEYRYYDPKT---VGLDFEGMIADI  174 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~-------------~~~v~~~~~~~---~~~d~~~l~~~i  174 (410)
                      ++|++.+.++.+.+....+|+..+.+|.+...... ..+..             +..++..+...   ..-+++.+++.+
T Consensus       111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~  190 (421)
T PRK06777        111 AEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLF  190 (421)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHH
Confidence            99999998888777655788888888876643322 11210             11112111000   012356677777


Q ss_pred             hc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          175 KA--APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       175 ~~--~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      .+  .++...++++...++..|. +++.+.+++|.++|++||+++|.||+|.+|+..   ...+....+ +..++++   
T Consensus       191 ~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---g~~~~~~~~-~~~pDiv---  263 (421)
T PRK06777        191 KADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFART---GKLFAMEYY-DVKPDLI---  263 (421)
T ss_pred             HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccC---Cchhhhhhc-CCCCCEE---
Confidence            53  2345666676667888886 578888999999999999999999999988743   223332222 2223433   


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      ++||.++ +|+|+||+++   ++++.+.+.    ......+.+.+.+++.++...|+..      ++  +...++++++.
T Consensus       264 ~~sK~l~-~G~pigav~~---~~~i~~~~~----~~~~~~T~~~~p~~~aaa~a~L~~~------~~--~~l~~~~~~~g  327 (421)
T PRK06777        264 TMAKSLG-GGMPISAVVG---RAEVMDAPA----PGGLGGTYAGNPLAVAAALAVLDVI------AE--EKLCQRALILG  327 (421)
T ss_pred             eeehhhc-CCCceEEEEE---cHHHHhccC----CCCCCCCCCcCHHHHHHHHHHHHHH------Hh--ccHHHHHHHHH
Confidence            7999999 8999999755   677544432    2222223345666666666555411      11  24556677777


Q ss_pred             HHHHHHhhhccCCCC-CcccccCCcceeee-cCC------CHHHH----HHhhhcCcEEEcCCC------eEEec-CCCc
Q 015283          332 QKLFDSLSAKDKSGK-DWSFILRQIGMFSF-TGL------NKAQS----DNMTNKWHVYMTKDG------RISLA-GLSL  392 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~-~~~~~~~~~~~~~~-~~~------~~~~~----~~ll~~~gi~v~~~g------Ris~~-~~~~  392 (410)
                      +++.+.|+ ++.... .+....+.+.++.+ +..      +.++.    .++++ .||.+.|++      ||+++ ..++
T Consensus       328 ~~l~~~L~-~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~~~~g~~lr~~ppl~i~~  405 (421)
T PRK06777        328 AHLVEVLE-KAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALE-EGLLLLSCGVHGNVIRFLYPLTIPD  405 (421)
T ss_pred             HHHHHHHH-HHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHh-CCeEEeecCCCCCEEEEeCCCCCCH
Confidence            77777776 542111 12334566666643 221      12222    23344 799998864      88865 3599


Q ss_pred             ccHHHHHHHHHHHhh
Q 015283          393 AKCEYLADAIIDSYH  407 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~  407 (410)
                      +++++++++|.+++.
T Consensus       406 ~~i~~~~~~l~~~l~  420 (421)
T PRK06777        406 AQFSKALNILTRLLA  420 (421)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999874

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.86  E-value=2e-19  Score=171.13  Aligned_cols=214  Identities=14%  Similarity=0.129  Sum_probs=145.7

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~  151 (410)
                      .....++++.+++++..        +++++  ++||++|+..+  +...+.+||+|+++.+.|++...    .+...|.+
T Consensus        60 ~p~~~~le~~la~l~g~--------~~~v~--~ssG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~  127 (390)
T PRK08133         60 NPTVTMFQERLAALEGA--------EACVA--TASGMAAILAV--VMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIE  127 (390)
T ss_pred             ChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcE
Confidence            34567899999998532        34666  79999999987  44457899999999999976544    44567888


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      ++.++.       .|++.+++.+.+   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|......   
T Consensus       128 v~~vd~-------~d~~~l~~~i~~---~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~---  191 (390)
T PRK08133        128 TTFVDL-------TDLDAWRAAVRP---NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ---  191 (390)
T ss_pred             EEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence            888876       267888888864   6788888999999999764   678888899999999999998654421   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA  311 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~  311 (410)
                       .  ++    .. ..++++.|+||.++.+|.++|+.  ++.+++.++++...+..    .....+...+.++..-++   
T Consensus       192 -~--pl----~~-g~Divv~S~sK~~~g~g~~~GG~--vv~~~~~~~~~~~~~~~----~g~~~~~~~a~~~l~gl~---  254 (390)
T PRK08133        192 -Q--PL----KL-GADVVIHSATKYLDGQGRVLGGA--VVGSKELMEEVFGFLRT----AGPTLSPFNAWVFLKGLE---  254 (390)
T ss_pred             -C--ch----hh-CCcEEEeecceeecCCcceEeEE--EEcCHHHHHHHHHHHHH----hCCCCCHHHHHHHHcccc---
Confidence             1  11    11 24688999999999899998665  33466655555543331    111233333222222222   


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                             .+....++..++...+.+.|+ +.
T Consensus       255 -------tl~~R~~~~~~~a~~la~~L~-~~  277 (390)
T PRK08133        255 -------TLSLRMEAHSANALALAEWLE-AH  277 (390)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHH-hC
Confidence                   123344455566777777777 55

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.86  E-value=2.4e-19  Score=169.99  Aligned_cols=219  Identities=13%  Similarity=0.080  Sum_probs=150.7

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----  146 (410)
                      .+| +......|+++++++...        +.+++  ++||++++..+  +...+.+||+|++++|+|+.....+.    
T Consensus        47 ~R~-~~pt~~~L~~~lA~l~g~--------~~~i~--~~sg~~Ai~~~--l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~  113 (386)
T PRK08045         47 SRR-GNPTRDVVQRALAELEGG--------AGAVL--TNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAK  113 (386)
T ss_pred             eCC-CCccHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHh
Confidence            445 555678999999999532        24666  89999999987  44457899999999999986443333    


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.++..++       ..|++.+++.+.+   +++++++++|+||||.+++   +++|.++|+++|+++|+|++|....
T Consensus       114 ~~gi~v~~vd-------~~d~e~l~~~l~~---~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~  180 (386)
T PRK08045        114 RGCYRVLFVD-------QGDEQALRAALAE---KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPA  180 (386)
T ss_pred             hCCeEEEEeC-------CCCHHHHHHhccc---CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccc
Confidence            2233333332       2578899888865   6778888999999999886   4567777999999999999987654


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                      ..    .  ++    .. ...++++|++|.++ .++.+.|++  ++.++++++++.....    ......+...+.++..
T Consensus       181 ~~----~--pl----~~-gaDivv~S~tK~l~G~~d~~~G~v--i~~~~~~~~~l~~~~~----~~g~~~~p~~~~l~~r  243 (386)
T PRK08045        181 LQ----N--PL----AL-GADLVLHSCTKYLNGHSDVVAGVV--IAKDPDVVTELAWWAN----NIGVTGGAFDSYLLLR  243 (386)
T ss_pred             cC----C--ch----hh-CCCEEEeecceeccCCCCceeEEE--EeCcHHHHHHHHHHHH----hcCCCCCHHHHHHHHh
Confidence            21    1  11    11 23588999999985 556778887  4556776665543222    2333456666666666


Q ss_pred             HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .|+.-          ....++..+++..+.+.|+ ..+
T Consensus       244 gl~tl----------~~R~~~~~~na~~la~~L~-~~p  270 (386)
T PRK08045        244 GLRTL----------VPRMELAQRNAQAIVKYLQ-TQP  270 (386)
T ss_pred             hhccH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence            66642          3555666777777788777 654

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.86  E-value=2e-19  Score=171.79  Aligned_cols=338  Identities=13%  Similarity=0.015  Sum_probs=194.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++.... + +.+.. ..+....+++.+......   .+.+.+  +++|++
T Consensus        40 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~-~-~~~~~-~~~~~~~la~~L~~~~~~---~~~v~f--~~sGse  109 (408)
T PRK04612         40 REYLDLAAGIAVCGLGHN--DPDLVAALTEQAGKLW-H-TSNVF-YSAPPLKLAEELVTASRF---AEKVFL--CNSGTE  109 (408)
T ss_pred             CEEEEcCccHhhccCCCC--CHHHHHHHHHHHHhcc-c-ccccc-CCHHHHHHHHHHHhhCCC---CCEEEE--cCchHH
Confidence            567898877543345655  5888898888775421 1 11111 112233344443322111   268999  999999


Q ss_pred             HHHHHHHHHHHhC--C----C-CEEEEcCCCCcchhhh-hhhCCCCcc---ceeeecC--CCcccChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYF--P----G-AKVLISSPTWGNHKNI-FNDARVPWS---EYRYYDP--KTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~--~----g-d~Vl~~~p~y~~~~~~-~~~~g~~~~---~v~~~~~--~~~~~d~~~l~~~i~~~~~~  180 (410)
                      |++.+.++.+.+.  .    + .+|+....+|.+.... +...+....   .-+..+.  .-.-.|++.+++.+..   .
T Consensus       110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~  186 (408)
T PRK04612        110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG---G  186 (408)
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC---C
Confidence            9999988887652  2    2 3688888887665322 221121100   0011000  0011377888887753   2


Q ss_pred             cEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          181 SFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~--~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      ....++..|.+++|.+++  .+.+++|.++|++||+++|+||+|.+++..+   ..+..    ...+.+..+.++||.++
T Consensus       187 ~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~a~----~~~~~~pdi~t~~K~l~  259 (408)
T PRK04612        187 DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG---TLFAH----WQEQVTPDIVTLAKALG  259 (408)
T ss_pred             CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---chhhh----hhcCCCCCEEEEcchhc
Confidence            333444567777876665  5579999999999999999999999877532   22211    12234556779999998


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL  338 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  338 (410)
                       +|+|+||++.   ++++.+.+.    ......+.+.+.+++.++...|+.-      ++  ++..++++++.+++.+.|
T Consensus       260 -~G~piga~~~---~~~~~~~~~----~~~~~~t~~~~p~~~aaa~a~L~~~------~~--~~l~~~~~~~g~~l~~~l  323 (408)
T PRK04612        260 -GGFPIGAMLA---GPKVAETMQ----FGAHGTTFGGNPLAAAVARVALRKL------AS--PQIAANVARQSAALRAGL  323 (408)
T ss_pred             -CCCceEEEEE---CHHHHhhhc----CCCcCCCCCCCHHHHHHHHHHHHHH------Hh--ccHHHHHHHHHHHHHHHH
Confidence             8999999754   566444433    2222222234555566655444321      00  244556666666666666


Q ss_pred             hhccCCCCCc-ccccCCcceeeecCC------CHHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHh
Q 015283          339 SAKDKSGKDW-SFILRQIGMFSFTGL------NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       339 ~~~~g~~~~~-~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l  406 (410)
                      + ++....++ ...... |.+.-+.+      ....+.+.+.++|+.+.+.|    |+..+ ..+++++++++++|++++
T Consensus       324 ~-~l~~~~~~i~~vrg~-Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~l  401 (408)
T PRK04612        324 E-ALNAEFGVFAQVRGR-GLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLAL  401 (408)
T ss_pred             H-HHHhhCCCeeeeecc-ceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHHH
Confidence            5 54311111 123333 33322221      12233333445799998765    77643 258999999999999998


Q ss_pred             hhc
Q 015283          407 HNV  409 (410)
Q Consensus       407 ~~~  409 (410)
                      .++
T Consensus       402 ~~~  404 (408)
T PRK04612        402 ADY  404 (408)
T ss_pred             HHH
Confidence            653

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.86  E-value=1.9e-19  Score=171.57  Aligned_cols=219  Identities=13%  Similarity=0.094  Sum_probs=147.3

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hhhhhh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFN  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~----~~~~~~  146 (410)
                      .+| +.....++++.++++...       ++.++   +++|++++.++  +...+.+||+|+++.|+|+.    +...+.
T Consensus        55 ~R~-~~p~~~~Le~~lA~l~g~-------~~~v~---~~sG~~Ai~~~--l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~  121 (405)
T PRK08776         55 TRS-GNPTRDLLGEALAELEGG-------AGGVI---TATGMGAINLV--LNALLQPGDTLVVPHDAYGGSWRLFNALAK  121 (405)
T ss_pred             cCC-CChHHHHHHHHHHHHhCC-------CceEE---EcCHHHHHHHH--HHHHhCCCCEEEEccCCchHHHHHHHHHHH
Confidence            344 334567899999998532       34554   47788999887  34447899999999999987    344455


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.+++.++.       .|++.+++.+++   +++++++++|+||||.+   .++++|+++|+++|+++|+|++|....
T Consensus       122 ~~g~~v~~v~~-------~d~~~l~~~i~~---~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~  188 (405)
T PRK08776        122 KGHFALITADL-------TDPRSLADALAQ---SPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPA  188 (405)
T ss_pred             hcCcEEEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCcccc
Confidence            56767666654       378889888864   67788889999999996   467888888999999999999987532


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                      .    ..  ++    . ...++++.|.+|.++.+ +...|++  +++++++.+++.....    ....+++.+.+.++..
T Consensus       189 ~----~~--pl----~-~gaDivv~S~tK~l~g~~~~~~G~v--v~~~~~l~~~l~~~~~----~~g~~~s~~~a~l~~~  251 (405)
T PRK08776        189 L----QK--PL----E-FGADLVLHSTTKYINGHSDVVGGAV--VARDAELHQQLVWWAN----ALGLTGSPFDAFLTLR  251 (405)
T ss_pred             c----CC--cc----c-ccCCEEEecCceeecCCCCceEEEE--EeCCHHHHHHHHHHHH----hcCCCCCHHHHHHHHh
Confidence            1    11  11    1 12358899999999755 4667876  4566776666543222    1122344544444443


Q ss_pred             HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .++.          ++...++..++...+.+.|+ +.+
T Consensus       252 gl~t----------l~~r~~~~~~na~~la~~L~-~~p  278 (405)
T PRK08776        252 GLRT----------LDARLRVHQENADAIAALLD-GHA  278 (405)
T ss_pred             hhCc----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence            3332          34555666777777777777 654

>PRK07505 hypothetical protein; Provisional

Probab=99.86  E-value=2.4e-19  Score=172.30  Aligned_cols=319  Identities=10%  Similarity=0.053  Sum_probs=178.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccC-----cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEY-----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y-----~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      ...+|+..+.++   |. ..+|++.+++.+++.. +.....     .......++++.+++++.        .+.+.+  
T Consensus        46 ~~~ld~~s~~~l---gl-~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~~--  111 (402)
T PRK07505         46 HTFVNFVSCSYL---GL-DTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFG--------ASVLTF--  111 (402)
T ss_pred             ceEEEeecCCcc---CC-CCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhC--------CCEEEE--
Confidence            467899775442   31 2258888888777643 200111     112334667777777642        133444  


Q ss_pred             cCChhhHHHHHHHHHHH-h-CCCC-EEEEcCCCC-cchhh--hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCc
Q 015283          108 GLSGTGSLRLAAALIER-Y-FPGA-KVLISSPTW-GNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS  181 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~-~-~~gd-~Vl~~~p~y-~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~  181 (410)
                       ++|+++...+..+... . .+|+ .|++.+..| +....  .....+.+++.+|.       .|++.+++.+.+   .+
T Consensus       112 -~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~---~~  180 (402)
T PRK07505        112 -TSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT---NK  180 (402)
T ss_pred             -CChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc---CC
Confidence             5667788776554432 2 2243 366666544 33211  11123445555554       378999988864   44


Q ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEeccccccccc
Q 015283          182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~  260 (410)
                      .++++++|+||||.+.+   +++|.++|+++|+++|+||+|...++++. ...+....+.. ..+++++++|+||.++.+
T Consensus       181 ~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~-g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~  256 (402)
T PRK07505        181 TVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKN-GEGYVRSELDYRLNERTIIAASLGKAFGAS  256 (402)
T ss_pred             CEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCC-CCchHHHHcCCCCCCCeEEEEechhhhhcc
Confidence            56666899999999888   56667779999999999999855443321 11222222222 356789999999999876


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHhhccC-ccc-CCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKRLARP-MYS-NPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      |   ||+  ++.++++++.+..    .... +++ +++..+..++...++   +..        +.+.+++++++.+.+.
T Consensus       257 G---g~~--~~~~~~~~~~~~~----~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~--------~~~~~~~l~~~~~~~~  319 (402)
T PRK07505        257 G---GVI--MLGDAEQIELILR----YAGPLAFSQSLNVAALGAILASAEIHLSEE--------LDQLQQKLQNNIALFD  319 (402)
T ss_pred             C---eEE--EeCCHHHHHHHHH----hCCCceeCCCCCHHHHHHHHHHHHHHhccC--------cHHHHHHHHHHHHHHH
Confidence            5   776  3456675555543    2222 222 333344444433332   211        2233444554444333


Q ss_pred             HHhhhccCCCCCcccccCCcceeeec--CC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHH
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYL  398 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~~~~--~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~  398 (410)
                      +.+. ..        ......++.++  +.   ..++.+++++ .||.+.+.       +    ||+++. .++++++++
T Consensus       320 ~~~~-~~--------~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~  389 (402)
T PRK07505        320 SLIP-TE--------QSGSFLPIRLIYIGDEDTAIKAAKQLLD-RGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRL  389 (402)
T ss_pred             HHHH-hc--------CCCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHH
Confidence            3221 10        01111111121  21   1234566665 69999753       2    888763 489999999


Q ss_pred             HHHHHHHhhh
Q 015283          399 ADAIIDSYHN  408 (410)
Q Consensus       399 ~~~l~~~l~~  408 (410)
                      ++.|++++.+
T Consensus       390 ~~~l~~~l~~  399 (402)
T PRK07505        390 CSLLKEILDE  399 (402)
T ss_pred             HHHHHHHHHh
Confidence            9999998764

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.85  E-value=2.5e-19  Score=172.82  Aligned_cols=340  Identities=14%  Similarity=0.090  Sum_probs=195.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++.....  ..|.......++.+.+++.....      -+.+.+  +++|
T Consensus        41 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~------~~~v~f--~~sG  110 (443)
T PRK08360         41 NEYIDFLSDAAVQNVGHN--NPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGD------NPKVSF--GLSG  110 (443)
T ss_pred             CEEEEccccHhhcccCCC--CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCC------CCEEEE--cCCH
Confidence            567898887543355665  58899988888754211  11212222334555555543211      257899  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchh-hhhhhCCC------------CccceeeecCC--Ccc--------cChh
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARV------------PWSEYRYYDPK--TVG--------LDFE  168 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~-~~~~~~g~------------~~~~v~~~~~~--~~~--------~d~~  168 (410)
                      ++|++.+.++.+.+....+|+....+|.+.. ..+...|.            .+..++..+..  .+.        .+++
T Consensus       111 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (443)
T PRK08360        111 SDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVE  190 (443)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHH
Confidence            9999999988877765578888777775543 21221121            12222221100  000        1234


Q ss_pred             hHHHHHhc--CCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          169 GMIADIKA--APGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       169 ~l~~~i~~--~~~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      .+++.+..  .+++..++++...+||+|.+++.. .++++.++|++||+++|+||+|.+|+..+   ..+....+ +..+
T Consensus       191 ~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G---~~~a~~~~-~~~p  266 (443)
T PRK08360        191 YIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG---KWFAIEHF-GVEP  266 (443)
T ss_pred             HHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---cchhhhhc-CCCC
Confidence            45566643  124567777666689999988755 59999999999999999999999887432   22222222 2233


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      +++   ++||.++ +|+|+||+++   ++++.+.+.    ......+...+.+++.++...|+.-      .+  +...+
T Consensus       267 Dii---tlsK~l~-~G~pigav~~---~~~i~~~~~----~~~~~~T~~~~p~~~aaa~a~l~~l------~~--~~l~~  327 (443)
T PRK08360        267 DII---TLGKPLG-GGLPISATIG---RAEIMDSLP----PLAHAFTLSGNPVASAAALAVIEEI------EE--KNLLK  327 (443)
T ss_pred             CEE---Eeccccc-CCceeEEEEE---cHHHHhhhc----CCCCCCCCCcCHHHHHHHHHHHHHH------HH--cCHHH
Confidence            444   6799999 8999999755   777555542    2212222234444555554444321      00  12334


Q ss_pred             HHHHHHHHHHHHhhhccCCCCC-cccccCCcceeeecCC--C-----------HHHHHHhhhcCcEEEcCC-C---eEEe
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFSFTGL--N-----------KAQSDNMTNKWHVYMTKD-G---RISL  387 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~--~-----------~~~~~~ll~~~gi~v~~~-g---Ris~  387 (410)
                      +++++.+++.+.|+ ++....+ +...... |.+.-+.+  +           ..+..++++ +|+.+.+. +   ||+.
T Consensus       328 ~~~~~g~~l~~~L~-~l~~~~~~v~~vrg~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~~~lr~~P  404 (443)
T PRK08360        328 RAEKLGNYTKKRLE-EMKKKHELIGDVRGI-GLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTFFSGNVLRIQP  404 (443)
T ss_pred             HHHHHHHHHHHHHH-HHHHhCCCeeeeecc-ceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEeecCCCEEEEeC
Confidence            55555555555554 3311000 1122223 33322111  0           123445554 69998754 2   7854


Q ss_pred             cC-CCcccHHHHHHHHHHHhhhc
Q 015283          388 AG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       388 ~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +. .|+++++++++++.+++..+
T Consensus       405 ~l~~t~~~id~~~~~l~~~l~~~  427 (443)
T PRK08360        405 PLTIEKEVLDEGLDILEEAIEDV  427 (443)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHH
Confidence            43 49999999999999998653

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.85  E-value=2.6e-20  Score=176.16  Aligned_cols=295  Identities=15%  Similarity=0.088  Sum_probs=183.1

Q ss_pred             ecCCCcccccHHHHHHHHHhhccCC--CccCcCC------cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283           45 RTEELQPYVLDVVKKAENLMLERGE--NKEYLPI------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR  116 (410)
Q Consensus        45 ~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~------~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~  116 (410)
                      +|..+..++++.+++++.+.+....  .......      .-.+++|+.+++++...      +++|++  ++|+|+++.
T Consensus         2 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--~~g~t~a~~   73 (353)
T TIGR03235         2 LDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGAD------TEEVIF--TSGATESNN   73 (353)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHHH
Confidence            4566666778999999987763211  0111111      12467888888886432      678999  999999998


Q ss_pred             HHHHHHHHh--CCC-CEEEEcCCCCcchhhh---hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          117 LAAALIERY--FPG-AKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       117 ~~~~~~~~~--~~g-d~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      .+...+...  .+| +.|++....|+.+...   ++..|.+++.++.  .+++.+|++.+++.+++   ++.++++++++
T Consensus        74 ~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~---~~~lv~~~~~~  148 (353)
T TIGR03235        74 LAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPV--DESGRIDVDELADAIRP---DTLLVSIMHVN  148 (353)
T ss_pred             HHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEcc--CCCCcCCHHHHHHhCCC---CCEEEEEEccc
Confidence            875433222  356 7888888777765443   4457888888887  34567899999998864   67888889999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||||.+.+   +++|.++|+++|+++++|+++. ++..+.+.         .....++++.|.+|.+|++|  +|++++ 
T Consensus       149 n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~-~g~~~~~~---------~~~~~D~~~~s~~K~~gp~g--~g~l~~-  212 (353)
T TIGR03235       149 NETGSIQP---IREIAEVLEAHEAFFHVDAAQV-VGKITVDL---------SADRIDLISCSGHKIYGPKG--IGALVI-  212 (353)
T ss_pred             CCceeccC---HHHHHHHHHHcCCEEEEEchhh-cCCccccc---------cccCCCEEEeehhhcCCCCc--eEEEEE-
Confidence            99999776   5777788999999999999954 33211111         12235677789999988766  588754 


Q ss_pred             eCCchhHHH--HHHHHH--hhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          271 CSSSDLAAR--VKSQLK--RLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       271 ~~~~~~~~~--~~~~~~--~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                        +++....  +.....  ...+.... +++.....++...++   +   +.+..++.+++++++++++.+.|+ +.|+ 
T Consensus       213 --~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~---~---~~~~~~~~~~~~~~l~~~l~~~l~-~~g~-  282 (353)
T TIGR03235       213 --RKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAE---I---ARRNAQAWEVKLRAMRNQLRDALQ-TLGV-  282 (353)
T ss_pred             --ccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHH---H---HHhhHHHHHHHHHHHHHHHHHHhc-cCCe-
Confidence              4432111  110000  00001111 222222222222222   1   123456778899999999999998 7763 


Q ss_pred             CCcccccC----Cccee--eecCCCHHHHHHhhhcCcEEEcCC
Q 015283          346 KDWSFILR----QIGMF--SFTGLNKAQSDNMTNKWHVYMTKD  382 (410)
Q Consensus       346 ~~~~~~~~----~~~~~--~~~~~~~~~~~~ll~~~gi~v~~~  382 (410)
                         ++..+    ..+..  ...+.+.+.+.+.|++ +|.+.+|
T Consensus       283 ---~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g  321 (353)
T TIGR03235       283 ---KLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVSTG  321 (353)
T ss_pred             ---EEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEEch
Confidence               33321    11222  2235566666666665 8999876

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.85  E-value=4.2e-19  Score=168.89  Aligned_cols=218  Identities=14%  Similarity=0.088  Sum_probs=145.8

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~  150 (410)
                      +.....+|++.++++....        ..++  +++|+.++..+  +...+.+||+|+++.|.|+...    ..+...|.
T Consensus        57 ~~p~~~~le~~lA~l~g~~--------~av~--~~sG~~Ai~~~--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~  124 (391)
T TIGR01328        57 GNPTVSNLEGRIAFLEGTE--------AAVA--TSSGMGAIAAT--LLTILKAGDHLISDECLYGCTFALLEHALTKFGI  124 (391)
T ss_pred             CCchHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCe
Confidence            4456789999999996432        2444  68889988877  4445779999999999887543    34456787


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++..       |++.+++.+.+   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|......  
T Consensus       125 ~~~~vd~~-------d~e~l~~~i~~---~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~--  189 (391)
T TIGR01328       125 QVDFINMA-------IPEEVKAHIKD---NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT--  189 (391)
T ss_pred             EEEEECCC-------CHHHHHHhhcc---CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC--
Confidence            77777651       68888888865   6788888999999999665   667777799999999999998754422  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                       .   .+    .. ..++++.|+||.++.+|.++|++  ++.+++++++++.......  .....+...+.++...|+..
T Consensus       190 -~---~~----~~-g~Divv~S~sK~lgg~g~~~gG~--v~~~~~li~~l~~~~~~~~--~g~~l~~~~a~l~l~~L~tl  256 (391)
T TIGR01328       190 -N---PV----AL-GVDVVVHSATKYIGGHGDVVAGL--ICGKAELLQQIRMVGIKDM--TGSVISPFDAWLILRGLKTL  256 (391)
T ss_pred             -C---ch----hc-CCCEEEccccccccCCCCceEEE--EEcCHHHHHHHHHHHHHhC--CCCCCCcHHHHHHHhCcCcH
Confidence             0   11    11 34588899999999889886554  3447787766654322111  11123333333333334322


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                                ....++.+++...+.+.|+ ..+
T Consensus       257 ----------~~r~~~~~~na~~la~~L~-~~p  278 (391)
T TIGR01328       257 ----------NIRMKRHSENAMKVAEYLK-SHP  278 (391)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence                      2334555666677777776 553

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.85  E-value=1e-18  Score=166.14  Aligned_cols=192  Identities=18%  Similarity=0.115  Sum_probs=138.1

Q ss_pred             ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEE
Q 015283           53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKV  131 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~V  131 (410)
                      ..+.-.+++.+.+..+. ..  +.....++++++++++..        +++++  ++|||+|+.++  +... +.+||+|
T Consensus        12 ~~~~e~~~~~~~l~~~~-~~--~g~~~~~le~~la~~~g~--------~~~v~--~~sgt~al~la--l~al~~~~Gd~V   76 (379)
T PRK11658         12 MGDEELAAVKEVLRSGW-IT--TGPKNQALEQAFCQLTGN--------QHAIA--VSSATAGMHIT--LMALGIGPGDEV   76 (379)
T ss_pred             CCHHHHHHHHHHHHcCC-cc--CCHhHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEE
Confidence            45666777777775543 22  234578999999999643        24555  79999999987  3444 5699999


Q ss_pred             EEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 015283          132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE  211 (410)
Q Consensus       132 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~  211 (410)
                      ++++++|..+...+...|++++.+++. .+++.+|++.+++.+.+   ++++++   |.||+|..   .++++|+++|++
T Consensus        77 iv~~~~~~~~~~~~~~~G~~~v~vd~~-~~~~~~d~~~l~~~i~~---~tkav~---~~~~~G~~---~d~~~i~~~a~~  146 (379)
T PRK11658         77 ITPSLTWVSTLNMIVLLGATPVMVDVD-RDTLMVTPEAIEAAITP---RTKAII---PVHYAGAP---ADLDAIRAIGER  146 (379)
T ss_pred             EECCCcHHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhccc---CCeEEE---EeCCCCCc---CCHHHHHHHHHH
Confidence            999999999998889999999999873 45677899999999875   667666   66889995   456788888999


Q ss_pred             cCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH
Q 015283          212 KNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       212 ~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                      +|+++|+|++|.... +.+  .      .....+ .  .+.||++.-.+++.+.|++  ++.++++.++++.
T Consensus       147 ~gi~vi~D~a~a~g~~~~~--~------~~g~~g-~--~~~Sf~~~K~l~~g~GG~v--~~~~~~~~~~~~~  205 (379)
T PRK11658        147 YGIPVIEDAAHAVGTYYKG--R------HIGARG-T--AIFSFHAIKNITCAEGGLV--VTDDDELADRLRS  205 (379)
T ss_pred             cCCeEEEECCCccCCeECC--e------ecCCCC-C--EEEeCCCCCcCcccCceEE--EECCHHHHHHHHH
Confidence            999999999976322 211  0      011122 2  3456655444566677776  5667887777664

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.85  E-value=6.3e-19  Score=167.66  Aligned_cols=216  Identities=15%  Similarity=0.110  Sum_probs=143.1

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~  150 (410)
                      +.....+|+++++++....       ..++   +++|++|+.++.  ...+.+||+|+++.|+|+.....+    ...|.
T Consensus        59 ~~p~~~~Le~~lA~~~g~~-------~~i~---~~sG~~Ai~~~l--~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi  126 (388)
T PRK07811         59 GNPTRTALEEQLAALEGGA-------YGRA---FSSGMAATDCLL--RAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGV  126 (388)
T ss_pred             CCccHHHHHHHHHHHhCCC-------ceEE---eCCHHHHHHHHH--HHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence            5567889999999996443       2344   477899999883  444789999999999998654333    23465


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++.       .|++++++.+.+   +++++++++|+||||.   ..++++|+++|+++|+++|+|++|......  
T Consensus       127 ~~~~~d~-------~d~e~l~~~i~~---~tklV~ie~p~NPtg~---~~dl~~I~~la~~~gi~lIvD~a~a~~~~~--  191 (388)
T PRK07811        127 EYTPVDL-------SDLDAVRAAITP---RTKLIWVETPTNPLLS---ITDIAALAELAHDAGAKVVVDNTFASPYLQ--  191 (388)
T ss_pred             EEEEeCC-------CCHHHHHHhcCc---CCeEEEEECCCCCcce---ecCHHHHHHHHHHcCCEEEEECCCCccccC--
Confidence            5555543       478999988875   6788888999999998   567888888899999999999998765421  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                       .   ++    . ...++++.|++|.++.+| .+.||+  +++++++.+++.. ++   .......+...+..+...|+.
T Consensus       192 -~---p~----~-~gaDivv~S~sK~l~g~~~~~gG~v--v~~~~~l~~~~~~-~~---~~~g~~~s~~~a~l~~~~L~t  256 (388)
T PRK07811        192 -Q---PL----A-LGADVVVHSTTKYIGGHSDVVGGAL--VTNDEELDEAFAF-LQ---NGAGAVPGPFDAYLTLRGLKT  256 (388)
T ss_pred             -C---ch----h-hCCcEEEecCceeecCCCCcEEEEE--EECCHHHHHHHHH-HH---HhcCCCCCHHHHHHHHhccCc
Confidence             1   11    1 124589999999998654 456887  4555665554432 11   111122333333333444443


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      -          ....++..++...+.+.|+ ..+
T Consensus       257 l----------~~R~~~~~~na~~la~~L~-~~p  279 (388)
T PRK07811        257 L----------AVRMDRHSENAEAVAEFLA-GHP  279 (388)
T ss_pred             H----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence            2          2334445566677777776 553

>PLN02651 cysteine desulfurase

Probab=99.85  E-value=1.9e-19  Score=170.78  Aligned_cols=260  Identities=16%  Similarity=0.066  Sum_probs=165.7

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCCCcc------CcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGENKE------YLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      |+|..+.+++++.+.+++.+.+.......      +..  ..-.+++|+.+++++...      +++|++  ++|+|+++
T Consensus         2 Yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--t~~~t~a~   73 (364)
T PLN02651          2 YLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGAD------PKEIIF--TSGATESN   73 (364)
T ss_pred             cccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHH
Confidence            46677777788999999887663211010      111  112557778888876432      678999  99999998


Q ss_pred             HHHHHHH-HH-hCCCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          116 RLAAALI-ER-YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       116 ~~~~~~~-~~-~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      .+++..+ .. ..+||+|+++...|+.+...+   ...|.+++.++.  .+++.+|++.+++.+++   ++.++++++++
T Consensus        74 ~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~i~~---~t~lv~v~~~~  148 (364)
T PLN02651         74 NLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPV--KSDGLVDLDELAAAIRP---DTALVSVMAVN  148 (364)
T ss_pred             HHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEcc--CCCCcCCHHHHHHhcCC---CcEEEEEECCC
Confidence            8764433 22 358999999998887654433   356888888887  34567899999999975   67788889999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||||.+.+   +++|.++|+++|+++++|.+++.... +.+.         ...+.++++.|..|.+|++|  +|++++ 
T Consensus       149 n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~-~~~~---------~~~~~D~~~~s~hK~~gp~G--~g~l~v-  212 (364)
T PLN02651        149 NEIGVIQP---VEEIGELCREKKVLFHTDAAQAVGKI-PVDV---------DDLGVDLMSISGHKIYGPKG--VGALYV-  212 (364)
T ss_pred             CCceeccc---HHHHHHHHHHcCCEEEEEcchhhCCc-ccCc---------ccCCCCEEEechhhhCCCCc--eEEEEE-
Confidence            99999665   66778889999999999999653221 1221         12245788889999765545  688755 


Q ss_pred             eCCchhHHHHHHHHHh--hccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283          271 CSSSDLAARVKSQLKR--LARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK  341 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  341 (410)
                        +++..+++......  ....... +++..+..++...|+   +   +.+..++++++.++.++++.+.|+ +
T Consensus       213 --~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~---~---~~~~~~~i~~~~~~l~~~l~~~l~-~  277 (364)
T PLN02651        213 --RRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACE---L---AMKEMDYDEKHMKALRERLLNGLR-A  277 (364)
T ss_pred             --cCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHH---H---HHHhHHHHHHHHHHHHHHHHHHHH-h
Confidence              44433332221110  0011122 233322222222222   1   122346777888888888888886 5

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.85  E-value=8.5e-19  Score=166.22  Aligned_cols=216  Identities=18%  Similarity=0.106  Sum_probs=149.0

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~  150 (410)
                      +.....++++.++++...        +..++  +++|++|+..+  +...+.+||+|+++.++|......    +...|.
T Consensus        38 ~~p~~~~le~~la~l~g~--------~~a~~--~~sG~~Ai~~~--l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~  105 (369)
T cd00614          38 GNPTVDALEKKLAALEGG--------EAALA--FSSGMAAISTV--LLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI  105 (369)
T ss_pred             CChhHHHHHHHHHHHHCC--------CCEEE--EcCHHHHHHHH--HHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence            556678999999998532        23455  68899999988  444477999999999999876543    346677


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++.       -|++.+++.+++   +++++++.+|+||||.+.+   +++|+++|+++|+++|+|++|......  
T Consensus       106 ~~~~v~~-------~d~~~l~~~i~~---~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~--  170 (369)
T cd00614         106 EVTFVDP-------DDPEALEAAIKP---ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ--  170 (369)
T ss_pred             EEEEeCC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC--
Confidence            7777665       157888888864   6778888999999999665   667888899999999999998654421  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                        .  .+     ....++++.|+||.++.+| .+.||++  ++++++++++......    .....+...+.++...|+.
T Consensus       171 --~--~~-----~~g~Divv~S~tK~l~g~~~~~gG~v~--~~~~~l~~~l~~~~~~----~g~~~~p~~a~~~l~~l~t  235 (369)
T cd00614         171 --R--PL-----ELGADIVVHSATKYIGGHSDVIAGVVV--GSGEALIQRLRFLRLA----LGTILSPFDAWLLLRGLKT  235 (369)
T ss_pred             --C--hh-----hhCCcEEEeccceeccCCCCceEEEEE--eCcHHHHHHHHHHHHh----hCCCCCHHHHHHHHcCCCC
Confidence              1  11     1135688999999998666 6788873  3333766666544321    1223344444444444432


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .          ....++..++...+.+.|+ +.+
T Consensus       236 l----------~~r~~~~~~na~~la~~L~-~~~  258 (369)
T cd00614         236 L----------PLRMERHSENALKVAEFLE-KHP  258 (369)
T ss_pred             H----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence            2          2345566777778888887 665

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.84  E-value=9e-19  Score=165.75  Aligned_cols=197  Identities=16%  Similarity=0.103  Sum_probs=137.1

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCC
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA  129 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd  129 (410)
                      |...+..++++.+.+..+.....  ..-..++.+.++++    .+    .+++++  ++|||+++.++.  ... +.|||
T Consensus         7 p~~~~~e~~a~~~~~~~~~~~~~--g~~~~~~e~~la~~----~g----~~~~v~--~~sgt~aL~~~l--~al~~~pGd   72 (376)
T TIGR02379         7 PPVTGQELEYIAEAISEGKLSGD--GPFSRRCETWLENR----TG----TKKALL--TPSCTAALEMAA--LLLDIQPGD   72 (376)
T ss_pred             CCCCHHHHHHHHHHHHcCCccCC--cHHHHHHHHHHHHH----hC----CCeEEE--eCCHHHHHHHHH--HHcCCCCcC
Confidence            33456778888887765431111  11134445555554    22    467888  999999999873  333 57999


Q ss_pred             EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283          130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI  209 (410)
Q Consensus       130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~  209 (410)
                      +|++++++|..+...+...|++++.+++. .+++.+|++.+++.+++   ++++++   |+||||...   ++++|.++|
T Consensus        73 ~Viv~~~t~~~~~~~~~~~G~~~v~vd~d-~~~~~~d~~~le~~i~~---~tk~Ii---p~~~~G~~~---d~~~I~~la  142 (376)
T TIGR02379        73 EVIMPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIESAITH---RTKAIV---PVHYAGVAC---DMDTIMALA  142 (376)
T ss_pred             EEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcCc---CceEEE---EeCCCCCcc---CHHHHHHHH
Confidence            99999999999999999999999999984 45578999999998875   677776   678999955   566888889


Q ss_pred             HHcCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHHHH
Q 015283          210 QEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKSQL  284 (410)
Q Consensus       210 ~~~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~  284 (410)
                      ++||++||+|++|+... +.+   .     .....+  .+.+.||  +|.+. +|.+.|++  ++.+++++++++...
T Consensus       143 ~~~~i~vIeDaa~~~g~~~~~---~-----~~g~~~--~~~~fSf~~~K~l~-~g~~gG~v--~~~~~~~~~~~~~~~  207 (376)
T TIGR02379       143 NKHQLFVIEDAAQGVMSTYKG---R-----ALGSIG--HLGTFSFHETKNYT-SGGEGGAL--LINDQAFIERAEIIR  207 (376)
T ss_pred             HHCCCEEEEECccccCCccCC---c-----ccCCCC--CEEEEeCCCCCcCc-ccCCceEE--EECCHHHHHHHHHHH
Confidence            99999999999977654 221   1     111111  2233333  37775 67778987  667788887776543

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.84  E-value=4.8e-19  Score=168.60  Aligned_cols=315  Identities=17%  Similarity=0.148  Sum_probs=203.8

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCCC----ccCcC----CcccHHHHHHHHHHhcCCCCCcccC-CceEEEecCChhhH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGEN----KEYLP----IEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGS  114 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~----~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~ggt~a  114 (410)
                      |+|..+..++|+.+.+++.+.......    ..+..    ..-..+.|+.+++++...      + ++|++  ++|+|.+
T Consensus         2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~------~~~~v~~--~~~~t~a   73 (371)
T PF00266_consen    2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAP------PDEEVVF--TSNGTEA   73 (371)
T ss_dssp             EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSS------TTEEEEE--ESSHHHH
T ss_pred             EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCc------ccccccc--ccccchh
Confidence            567778888899999998887632110    11111    223468889999997544      4 68988  9999999


Q ss_pred             HHHHHHHHH-HhCCCCEEEEcCCCCcchhh----hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283          115 LRLAAALIE-RYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA  189 (410)
Q Consensus       115 ~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p  189 (410)
                      ++.++..+. .+.+||+|++..-.|++...    ..+..|.++..++..  .+..+|++.+++.+++   ++.+++++..
T Consensus        74 ~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~--~~~~~~~~~~~~~l~~---~~~lv~~~~~  148 (371)
T PF00266_consen   74 LNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD--PGGSLDLEDLEEALNP---DTRLVSISHV  148 (371)
T ss_dssp             HHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG--TTSSCSHHHHHHHHHT---TESEEEEESB
T ss_pred             hhhhhhccccccccccccccccccccccccccccccccchhhhcccccc--ccchhhhhhhhhhhcc---ccceEEeecc
Confidence            998744332 26799999999999887663    334678899888873  4557899999999975   7778888889


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      +|.||...+   +++|.++|+++|+++++|.+++ ++..+.+         ....+.+++++|..|.+|++|  +|++++
T Consensus       149 ~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~-~g~~~id---------~~~~~~D~~~~s~~Kl~gp~G--~g~l~v  213 (371)
T PF00266_consen  149 ENSTGVRNP---IEEIAKLAHEYGALLVVDAAQS-AGCVPID---------LDELGADFLVFSSHKLGGPPG--LGFLYV  213 (371)
T ss_dssp             ETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTT-TTTSS-----------TTTTTESEEEEESTSTTSSST--EEEEEE
T ss_pred             cccccEEee---eceehhhhhccCCceeEechhc-ccccccc---------ccccccceeeecccccCCCCc--hhhhee
Confidence            999999555   6677788999999999999954 4432122         123346788899999666666  588876


Q ss_pred             EeCCchhHHHHHHHHH-----------hh-----ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283          270 VCSSSDLAARVKSQLK-----------RL-----ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ  332 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~-----------~~-----~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  332 (410)
                         +++..+++.....           ..     ...... +++.....++...++.-     -...+++++++..++.+
T Consensus       214 ---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~-----~~~g~~~i~~~~~~l~~  285 (371)
T PF00266_consen  214 ---RPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLL-----EEIGIERIRERIRELAE  285 (371)
T ss_dssp             ---EHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
T ss_pred             ---hhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhh-----hccccccchhhhhhHHH
Confidence               7776666631110           00     000111 23333322222222211     12345788888999999


Q ss_pred             HHHHHhhhccCCCCCccccc-----CCccee--eecCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC
Q 015283          333 KLFDSLSAKDKSGKDWSFIL-----RQIGMF--SFTGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG  389 (410)
Q Consensus       333 ~l~~~l~~~~g~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~  389 (410)
                      ++.+.|. +++.   +.+..     ...+..  .+.+.+.+.+.+.+++.||.+..|              |  |+|+..
T Consensus       286 ~~~~~l~-~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~  361 (371)
T PF00266_consen  286 YLREALE-ELPG---IEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHY  361 (371)
T ss_dssp             HHHHHHH-HTTT---EEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GT
T ss_pred             HHHhhhh-cCCc---eeEeeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccC
Confidence            9999998 7763   23322     223333  334667766665556569998873              2  999775


Q ss_pred             C-CcccHHHH
Q 015283          390 L-SLAKCEYL  398 (410)
Q Consensus       390 ~-~~~~i~~~  398 (410)
                      . |++|++++
T Consensus       362 ~nt~~dv~~l  371 (371)
T PF00266_consen  362 YNTEEDVDRL  371 (371)
T ss_dssp             TSSHHHHHHH
T ss_pred             CCCHHHHhhC
Confidence            3 88898875

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.83  E-value=1.1e-18  Score=166.61  Aligned_cols=217  Identities=17%  Similarity=0.102  Sum_probs=143.3

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~  150 (410)
                      +.....++++.++++....       ..++   +++|+.++.++.  ...+.+||+|+++.|.|....    ..+...|+
T Consensus        63 ~~p~~~~le~~lA~l~g~~-------~~i~---~~sG~~Al~~~l--~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~  130 (403)
T PRK07503         63 SNPTLALLEQRMASLEGGE-------AAVA---LASGMGAITATL--WTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGV  130 (403)
T ss_pred             CCchHHHHHHHHHHHhCCC-------cEEE---EcCHHHHHHHHH--HHHcCCCCEEEEccCccchHHHHHHHHHhhCCE
Confidence            4456789999999986432       2343   578999988873  344789999999999997533    34456788


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      +++.++.       .|++.+++.+++   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|......  
T Consensus       131 ~v~~vd~-------~d~~~l~~~i~~---~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~--  195 (403)
T PRK07503        131 TVRHVDL-------TDPAALKAAISD---KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ--  195 (403)
T ss_pred             EEEEeCC-------CCHHHHHHhcCc---cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence            8877765       268889888865   6777888999999999654   677788899999999999998754321  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                        .  ++    . ...+++++|+||.++.+| .+.|+++   .+++++++++....  ........+...+..+...|+.
T Consensus       196 --~--~l----~-~g~Di~v~S~tK~l~g~gd~~gG~v~---~~~~l~~~l~~~~~--~~~~g~~~s~~~a~l~l~~L~t  261 (403)
T PRK07503        196 --R--PL----E-LGADLVVHSATKYLGGHGDITAGLVV---GGKALADRIRLEGL--KDMTGAVMSPFDAFLLMRGLKT  261 (403)
T ss_pred             --C--ch----h-hCCCEEEccccccccCCCceeEEEEE---cCHHHHHHHHhhhH--HhCcCCCCCHHHHHHHHcCcch
Confidence              1  11    1 134588999999999766 6677763   47776666543211  1111223444444434444332


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      -          ....++..++...+.+.|+ +.+
T Consensus       262 l----------~~r~~~~~~na~~~a~~L~-~~p  284 (403)
T PRK07503        262 L----------ALRMDRHCASAQAVAEWLA-RHP  284 (403)
T ss_pred             H----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence            2          2222333455666666666 543

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.83  E-value=1.2e-18  Score=163.44  Aligned_cols=341  Identities=14%  Similarity=0.105  Sum_probs=211.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...|||..|..-.+.|+.  +|.|.+++.+++.. . ....|...+...++.|.+.+.+...     ..+.+.+  +++|
T Consensus        56 ~~ylDf~sgi~v~~~GH~--hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-----~~~~~~f--~~sG  126 (447)
T COG0160          56 NEYLDFLSGIAVLNLGHN--HPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-----GLKKVFF--GNSG  126 (447)
T ss_pred             CEEEEcccCcchhccCCC--CHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcc-----cCCeEEe--cCCc
Confidence            467899987554466665  69999999887744 2 2244444345556777777765442     1467888  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhC-------------CCCccceeeecC--CCccc--------Ch
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDA-------------RVPWSEYRYYDP--KTVGL--------DF  167 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~-------------g~~~~~v~~~~~--~~~~~--------d~  167 (410)
                      ++|++++.++.+.......|+...-.|.+... .+...             ...+..+|..+.  ..+..        ..
T Consensus       127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~  206 (447)
T COG0160         127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL  206 (447)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence            99999999999888877889888877754422 11111             112444444221  11111        22


Q ss_pred             hhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283          168 EGMIADIKA---APGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR  243 (410)
Q Consensus       168 ~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~  243 (410)
                      +.+++.+..   .+.....+++-..+...|.+.++++ ++++.++|++||+++|+||++.+++-.   .+.|.+..+. -
T Consensus       207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRT---G~~fa~E~~g-v  282 (447)
T COG0160         207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRT---GKMFAFEHFG-V  282 (447)
T ss_pred             HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc---ccchhhhhcC-C
Confidence            334443322   2445677777778988998776666 999999999999999999999999843   4667665542 2


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .++++   ++||.+| .|+.+|.++.   .++    +..........++ ..+.++..++...|+.-+     .   +..
T Consensus       283 ~PDiv---t~aK~ig-~G~Pl~avv~---r~e----i~~~~~g~~~~Tf-~GNpva~Aaa~AvL~vie-----~---e~L  342 (447)
T COG0160         283 EPDIV---TLAKSLG-GGLPLSAVVG---RAE----IMDWPPGGHGGTF-GGNPVACAAALAVLDVIE-----E---ENL  342 (447)
T ss_pred             CCCEE---Eeccccc-CCCceeEEec---cHH----hcccCCcccCCCC-CcCHHHHHHHHHHHHHHH-----H---ccH
Confidence            34555   6899999 4999999754   666    4333333333333 344444444443433110     0   144


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCCC------e
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKDG------R  384 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~g------R  384 (410)
                      .++.++.-+++.+.|. ++.-+.+..-..+..|.++-+.+         +    ...+.++++ .|+.+..+|      |
T Consensus       343 ~~~a~~~G~~l~~~L~-~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~-~Glil~~~G~~~nviR  420 (447)
T COG0160         343 LERAAELGEYLRDRLE-ELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFE-RGLLLLTCGPHGNVLR  420 (447)
T ss_pred             HHHHHHHHHHHHHHHH-HHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHH-cCCEEeccCCCCcEEE
Confidence            4555666666666665 44321111111233455543322         1    223556665 599888776      8


Q ss_pred             EEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          385 ISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       385 is~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |..+- +++++++.+++.|.+++.+.
T Consensus       421 i~PPL~is~e~~d~~l~il~~al~~~  446 (447)
T COG0160         421 ILPPLTISDEELDEGLDILEEALKEA  446 (447)
T ss_pred             EeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            87543 59999999999999998764

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.83  E-value=9.5e-19  Score=169.35  Aligned_cols=341  Identities=11%  Similarity=0.032  Sum_probs=195.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc--CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|..-...|+.  +|.+.+++.++++......  ........++.+.++++....      .+.+.+  +++|
T Consensus        43 ~~ylD~~~g~~~~~lGh~--~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~------~~~v~f--~~SG  112 (433)
T PRK08117         43 KEYLDFTSGIAVANVGHR--HPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGG------LDCFFF--SNSG  112 (433)
T ss_pred             CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCcH
Confidence            467898887543345554  5889988888775421111  112334456777777664221      357888  8999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCC--C-----------CccceeeecCC--Ccc--------cCh
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR--V-----------PWSEYRYYDPK--TVG--------LDF  167 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g--~-----------~~~~v~~~~~~--~~~--------~d~  167 (410)
                      ++|++.+.++.+.+....+|+..+-+|.+.... +...+  .           .+..+|..+..  ...        .++
T Consensus       113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (433)
T PRK08117        113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL  192 (433)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence            999999988776665557888888777654322 11111  0           11222221100  000        145


Q ss_pred             hhHHHHHhc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          168 EGMIADIKA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       168 ~~l~~~i~~--~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      +.+++.+.+  .++...++++...+.-.|.+. +.+.++++.++|++||+++|+||+|.+|+..+   ..+....+ +..
T Consensus       193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G---~~~~~~~~-gv~  268 (433)
T PRK08117        193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTG---EWFAAQTF-GVV  268 (433)
T ss_pred             HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccc---cchhHhhc-CCC
Confidence            666766653  234566666666666677765 66669999999999999999999999876432   22221111 111


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA  324 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~  324 (410)
                      ++   +.++||.++ +|+++|++++   ++++.+.+.    ......+.+.+.+++.++...|+.-+      +  +...
T Consensus       269 pD---i~t~sK~lg-~G~pigav~~---~~~i~~~~~----~~~~~~T~~~np~~~aaa~a~L~~l~------~--~~l~  329 (433)
T PRK08117        269 PD---IMTIAKGIA-SGLPLSAVVA---SKELMEQWP----LGSHGTTFGGNPVACAAALATLEVIK------E--EKLL  329 (433)
T ss_pred             CC---Eeehhhhcc-CCCcceeEEE---cHHHHhhcc----CCCCCCCCCcCHHHHHHHHHHHHHHH------h--ccHH
Confidence            22   359999999 8999999754   777554442    21222222345555555544443110      0  1233


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C----HHHHHHhhhcCcEEEcCCC------eEEe
Q 015283          325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N----KAQSDNMTNKWHVYMTKDG------RISL  387 (410)
Q Consensus       325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~ll~~~gi~v~~~g------Ris~  387 (410)
                      ++++++.+++.+.|+ ++....++....+..|.+..+.+       +    ..+...++ +.||.+.+.|      ||++
T Consensus       330 ~~~~~~g~~l~~~L~-~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~~~~~lRl~p  407 (433)
T PRK08117        330 DNANEMGAYALERLE-VLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCL-EKGLLFYLCGNAGNVLRMIP  407 (433)
T ss_pred             HHHHHHHHHHHHHHH-HHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHH-HCCCEEeecCCCCCEEEEeC
Confidence            444555555555554 43211111112233344433222       1    12244454 4699886532      8875


Q ss_pred             c-CCCcccHHHHHHHHHHHhhhc
Q 015283          388 A-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       388 ~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      + ..|++++++++++|.+++.++
T Consensus       408 ~~~~t~~~i~~~~~~l~~~l~~~  430 (433)
T PRK08117        408 PLTVTKEEIDEGLDILDEALTEY  430 (433)
T ss_pred             CccCCHHHHHHHHHHHHHHHHHH
Confidence            3 359999999999999998754

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.83  E-value=2.1e-18  Score=163.65  Aligned_cols=216  Identities=16%  Similarity=0.105  Sum_probs=143.0

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh---hCCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN---DARVP  151 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~---~~g~~  151 (410)
                      ......++++.+++++..        +++++  +++|+.|+..+  +...+.+||+|+++.|+|..+...++   ..|.+
T Consensus        51 ~np~~~~lE~~lA~l~g~--------~~~l~--~~sG~~Ai~~~--l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~  118 (385)
T PRK08574         51 ENPTLRPLEEALAKLEGG--------VDALA--FNSGMAAISTL--FFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVK  118 (385)
T ss_pred             CCccHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcE
Confidence            455688999999999632        34555  78999999887  44557899999999999998877664   34554


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      +..+.        +|++.+++.+.+  .+++++++++|+||||.+++   +++|+++|+++|+++|+|++|......   
T Consensus       119 v~~~~--------~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~---  182 (385)
T PRK08574        119 VVLAY--------PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY---  182 (385)
T ss_pred             EEEEC--------CCHHHHHHhcCc--cCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---
Confidence            44332        367888888864  25677778999999999776   557788899999999999998533211   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                       .  ++     ..+.++++.|++|.++.+|-.+ |++  +++++++.++++....    ......+......+...|+.-
T Consensus       183 -~--~l-----~~GaDivv~S~sK~l~g~~d~~gG~v--i~~~~~~~~~~~~~~~----~~g~~~~p~~a~l~l~~l~tL  248 (385)
T PRK08574        183 -R--PL-----RHGADFVVHSLTKYIAGHNDVVGGVA--VAWSGEFLEELWEWRR----RLGTIMQPFEAYLVLRGLKTL  248 (385)
T ss_pred             -C--hh-----hhCCcEEEeeCceeecCCCCceeEEE--EECcHHHHHHHHHHHH----hcCCCCCHHHHHHHHcccCcH
Confidence             1  11     1235789999999997677665 544  5667776666554322    111223333333333333332


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                                ....++..++...+.+.|+ ..+
T Consensus       249 ----------~~R~~~~~~na~~la~~L~-~~p  270 (385)
T PRK08574        249 ----------EVRFERQCRNAMAIAEFLS-EHP  270 (385)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence                      2333344446666666666 554

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.83  E-value=3e-18  Score=163.10  Aligned_cols=173  Identities=15%  Similarity=0.101  Sum_probs=129.2

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFN  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~  146 (410)
                      .+| +.....+|++.++++..        .+++++  ++||++|+.+++  ...+.+||+|+++.|+|+.+..    .+.
T Consensus        60 ~r~-~~pt~~~Le~~lA~l~g--------~~~~l~--~~sgt~Ai~~~l--~al~~~GD~Vl~~~~~y~~~~~~~~~~~~  126 (394)
T PRK07050         60 GLH-ATPTSLALAQRLAEIEG--------GRHALL--QPSGLAAISLVY--FGLVKAGDDVLIPDNAYGPNRDHGEWLAR  126 (394)
T ss_pred             CCC-CCHHHHHHHHHHHHHhC--------CCeEEE--eccHHHHHHHHH--HHHhCCCCEEEEecCCcccHHHHHHHHHH
Confidence            344 55567899999998852        256878  899999999984  4447899999999999998764    445


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.++..++..       +.+.+++.+++   +++++++++|+||||.   ..++++|+++|+++|+++|+|++|....
T Consensus       127 ~~Gi~v~~vd~~-------~~~~l~~~i~~---~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~  193 (394)
T PRK07050        127 DFGITVRFYDPL-------IGAGIADLIQP---NTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAGL  193 (394)
T ss_pred             hcCeEEEEECCC-------CHHHHHHhcCC---CCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCccccc
Confidence            678887776531       34677777764   6788889999999976   8899999999999999999999986543


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                      .-    .  ++     ..+.++++.|++|.++- .+.+.|++  ++++++++++++.
T Consensus       194 ~~----~--~l-----~~GaDi~v~S~tK~~~g~~~~~gG~v--~~~~~~~~~~~~~  237 (394)
T PRK07050        194 AF----K--PF-----EHGVDISVQALTKYQSGGSDVLMGAT--ITADAELHAKLKL  237 (394)
T ss_pred             cc----C--HH-----HcCCeEEEEECCceecCCCCeeEEEE--EECCHHHHHHHHH
Confidence            21    1  11     11347889999999962 33457876  5667776666554

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.83  E-value=1.8e-18  Score=164.99  Aligned_cols=218  Identities=10%  Similarity=0.054  Sum_probs=145.9

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hhhhhh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFN  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~----~~~~~~  146 (410)
                      .+| +.....++++.++++...        ++.++  +++|+.++..+  +...+.+||+|+++...|++    +...+.
T Consensus        65 ~r~-~~p~~~~le~~lA~l~g~--------~~al~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~  131 (403)
T PRK07810         65 SRY-GNPTVSMFEERLRLIEGA--------EACFA--TASGMSAVFTA--LGALLGAGDRLVAARSLFGSCFVVCNEILP  131 (403)
T ss_pred             eCC-CCchHHHHHHHHHHHhCC--------CcEEE--ECChHHHHHHH--HHHHhCCCCEEEEccCCcchHHHHHHHHHH
Confidence            445 445578999999999532        24445  69999999887  44457899999998865543    445666


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.+++.++.       .|++++++.+++   +++++++++|+||||.+.   ++++|+++|+++|+++|+|++|....
T Consensus       132 ~~G~~v~~vd~-------~d~~~l~~ai~~---~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~  198 (403)
T PRK07810        132 RWGVETVFVDG-------EDLSQWEEALSV---PTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPL  198 (403)
T ss_pred             HcCcEEEEECC-------CCHHHHHHhcCc---CceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccc
Confidence            78988888864       378899998875   678888899999999966   57778888999999999999987544


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHH-HHHHHHHhhccCcccCCChhHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVA  304 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~  304 (410)
                      ...      ++     ..+.++++.|++|.++..|.++ |++  ++ +++.+. ++.....    ......+...+.++.
T Consensus       199 ~~~------~~-----~~gaDivv~S~tK~l~g~g~~~gG~v--~~-~~~~~~~~l~~~~~----~~g~~~s~~~a~l~l  260 (403)
T PRK07810        199 LQR------GL-----PLGADVVVYSGTKHIDGQGRVLGGAI--LG-DREYIDGPVQKLMR----HTGPALSAFNAWVLL  260 (403)
T ss_pred             cCC------hh-----hcCCcEEEccCCceecCCcCceeEEE--Ee-ChHHHHHHHHHHHH----HhCCCCCHHHHHHHH
Confidence            321      11     1135788999999998889888 554  23 444333 3332222    222244554444455


Q ss_pred             HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          305 NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ..|+.-          ....++..++...+.+.|+ ..+
T Consensus       261 ~~L~tl----------~~R~~~~~~~a~~~a~~L~-~~p  288 (403)
T PRK07810        261 KGLETL----------ALRVRHSNASALRIAEFLE-GHP  288 (403)
T ss_pred             hccCcH----------HHHHHHHHHHHHHHHHHHh-cCC
Confidence            554432          2333444445555566666 553

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.83  E-value=1.7e-18  Score=164.48  Aligned_cols=219  Identities=16%  Similarity=0.180  Sum_probs=147.4

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcch----hhhhh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFN  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~----~~~~~  146 (410)
                      .+| +.....++++.+++++..        +.+++  +++|+.++..+  +...+.+||+|+++.+.|++.    ...++
T Consensus        49 ~r~-~~p~~~~le~~la~l~g~--------~~~~~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~  115 (380)
T TIGR01325        49 SRY-ANPTVAAFEERIAALEGA--------ERAVA--TATGMSAIQAA--LMTLLQAGDHVVASRSLFGSTVGFISEILP  115 (380)
T ss_pred             ecC-CCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCCcchHHHHHHHHHH
Confidence            344 345578999999998532        34556  79999999987  344477999999999988753    33556


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.++..++.       .|++.+++.+.+   +++++++++|+||+|.+.   ++++|.++|+++|+++|+|++|..+.
T Consensus       116 ~~g~~v~~v~~-------~d~~~l~~~i~~---~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~  182 (380)
T TIGR01325       116 RFGIEVSFVDP-------TDLNAWEAAVKP---NTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPV  182 (380)
T ss_pred             HhCCEEEEECC-------CCHHHHHHhcCC---CceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccc
Confidence            77888877765       267888887764   677888899999999965   56777888999999999999987544


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV  306 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  306 (410)
                      ..    .  ++     ....++++.|+||.++.+|.++|.+  +..+++.++++......    .....+...+.++...
T Consensus       183 ~~----~--pl-----~~g~Divv~S~sK~l~g~g~~~gG~--vv~~~~~~~~l~~~~~~----~g~~~~p~~a~~~l~~  245 (380)
T TIGR01325       183 LQ----Q--PL-----KLGADVVVYSATKHIDGQGRVMGGV--IAGSEELMAEVAVYLRH----TGPAMSPFNAWVLLKG  245 (380)
T ss_pred             cC----C--ch-----hhCCCEEEeeccceecCCCCeEEEE--EEeCHHHHHHHHHHHHh----hCCCCCHHHHHHHHhc
Confidence            21    1  11     1134688889999998888887444  23466766666554331    1112233322222222


Q ss_pred             hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       307 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ++.          +....++..+++..+.+.|+ +.+
T Consensus       246 l~t----------l~~r~~~~~~~a~~la~~L~-~~p  271 (380)
T TIGR01325       246 LET----------LSLRMQKQFDSALAIAEWLQ-AQP  271 (380)
T ss_pred             cCc----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence            222          23445556667777777777 664

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.83  E-value=2.9e-18  Score=162.04  Aligned_cols=219  Identities=11%  Similarity=0.040  Sum_probs=146.3

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----h
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~  146 (410)
                      .+| +......|+++++++..        .+++++  ++||++++.++  +...+.+||+|+++.|+|+.....+    .
T Consensus        48 ~R~-~npt~~~Le~~lA~leg--------~e~ivv--t~gg~~Ai~~~--l~all~~Gd~Il~~~~~y~~~~~~~~~~~~  114 (388)
T PRK08861         48 TRS-GNPNRGLLEQTLSELES--------GKGAVV--TNCGTSALNLW--VSALLGPDDLIVAPHDCYGGTYRLFNTRAN  114 (388)
T ss_pred             cCC-CCchHHHHHHHHHHHhC--------CCeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCchHHHHHHHHHHHh
Confidence            444 45567899999999953        367888  99999999998  4444789999999999998644333    2


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.++..++.       .|++.+++.+++   +++++++++|+||||.+++.+   +|.++|+++|+++|+|++|....
T Consensus       115 ~~gi~v~~vd~-------~d~e~l~~~i~~---~tklV~lesP~NPtG~v~dl~---~I~~la~~~gi~vIvDea~~~~~  181 (388)
T PRK08861        115 KGDFKVQFVDQ-------SDAAALDAALAK---KPKLILLETPSNPLVRVVDIA---ELCQKAKAVGALVAVDNTFLTPV  181 (388)
T ss_pred             cCCeEEEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCccccc
Confidence            34555555542       478889888865   678888899999999988754   66777999999999999987544


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                      ..    .  ++     ..+.++++.|++|.++-+ +...|++  +++++++.++++. ++   .......+......+.+
T Consensus       182 ~~----~--pl-----~~GaDivv~S~tK~l~G~~d~~gG~i--~~~~~~~~~~~~~-~~---~~~G~~~~p~~a~l~~r  244 (388)
T PRK08861        182 LQ----K--PL-----ELGADFVIHSTTKYINGHSDVIGGVL--ITKTKEHAEELAW-WG---NCIGATGTPFDSYMTLR  244 (388)
T ss_pred             cC----C--Cc-----ccCCCEEEeecceeccCCCcceeEEE--EecHHHHHHHHHH-HH---hccCCCCChHHHHHHHh
Confidence            21    1  11     113568999999998643 4567876  3445565555442 22   22222334444444555


Q ss_pred             HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      -|+.-.          -..++..++...+.+.|+ ..+
T Consensus       245 gl~Tl~----------lR~~~~~~~a~~~a~~L~-~~p  271 (388)
T PRK08861        245 GIRTLG----------ARMRVHEESAQQILAYLQ-TQS  271 (388)
T ss_pred             cCCCHH----------HHHHHHHHHHHHHHHHHH-hCC
Confidence            555432          223444455666666666 554

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.83  E-value=2.5e-18  Score=165.06  Aligned_cols=338  Identities=11%  Similarity=0.050  Sum_probs=193.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-C-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++.... . ..+.+.+...++.+.+++......     .+.+.+  +++|
T Consensus        40 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~-----~~~v~f--~~SG  110 (425)
T PRK07495         40 RRYIDFAAGIAVVNTGHR--HPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDF-----AKKTIF--VTTG  110 (425)
T ss_pred             CEEEEccccHHhhccCCC--CHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCC-----CCEEEE--CCch
Confidence            467898887543344654  5888898888775421 1 112233344556666666542211     257899  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCC-------------CccceeeecCCCcccC----hhhHHHH
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV-------------PWSEYRYYDPKTVGLD----FEGMIAD  173 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~d----~~~l~~~  173 (410)
                      ++|++.+.++.+.+....+|+....+|.+....... .|.             .+..+|..+.. ...+    ++.+++.
T Consensus       111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~  189 (425)
T PRK07495        111 AEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKL  189 (425)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHH
Confidence            999999988887776557888888888665322111 110             12223321111 1122    4445666


Q ss_pred             Hhc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          174 IKA--APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       174 i~~--~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      +..  .+++..++++...+.-+|. .+|.+.+++|.++|++||+++|+||+|.+|+..   ...+...    ..+.+..+
T Consensus       190 ~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~---G~~~a~~----~~gv~pDi  262 (425)
T PRK07495        190 FKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFART---GKLFAME----HHEVAADL  262 (425)
T ss_pred             HHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcC---CCceeec----ccCCCCCE
Confidence            642  1234455554433333784 568888999999999999999999999987643   2222211    12233346


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      .++||.++ +|+++|++++   ++++.+.+.    ......+...+.+++.++   ...+.+++           ..+++
T Consensus       263 ~tlsK~l~-~G~pigav~~---~~~i~~~~~----~~~~~~T~~~~pl~~aaa~a~l~~l~~~~-----------l~~~~  323 (425)
T PRK07495        263 TTMAKGLA-GGFPLAAVTG---RAEIMDAPG----PGGLGGTYGGNPLGIAAAHAVLDVIEEED-----------LCERA  323 (425)
T ss_pred             Eeehhhhc-CCccceEEEE---cHHHHhccC----CCCcCCCCCCCHHHHHHHHHHHHHHHhch-----------HHHHH
Confidence            78999998 7999999755   777544432    211222223444444533   34443332           22333


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC--------HH----HHHHhhhcCcEEEcCC---C---eEEec-
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--------KA----QSDNMTNKWHVYMTKD---G---RISLA-  388 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~ll~~~gi~v~~~---g---Ris~~-  388 (410)
                      ++..+++.+.|+ ++-...+........|.+.|+.+.        .+    +...++ ++|+.+.+.   +   ||..+ 
T Consensus       324 ~~~g~~l~~~L~-~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g~~~~~~r~~Ppl  401 (425)
T PRK07495        324 NQLGNRLKQRLA-SLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCGVHGNVIRFLAPI  401 (425)
T ss_pred             HHHHHHHHHHHH-HHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecCCCCCEEEEeCCC
Confidence            344444444443 221000011112234777776441        11    233444 469998653   2   77644 


Q ss_pred             CCCcccHHHHHHHHHHHhhhc
Q 015283          389 GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       389 ~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .++++++++++++|.++++++
T Consensus       402 ~it~~~id~~~~~l~~~l~~~  422 (425)
T PRK07495        402 TIQDDVFAEALDILEASILEA  422 (425)
T ss_pred             ccCHHHHHHHHHHHHHHHHHH
Confidence            259999999999999999765

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.82  E-value=2.2e-18  Score=168.21  Aligned_cols=319  Identities=12%  Similarity=0.043  Sum_probs=194.9

Q ss_pred             cHHHHHHHHHhh-ccCCCccCc---CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH--HhCC
Q 015283           54 LDVVKKAENLML-ERGENKEYL---PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE--RYFP  127 (410)
Q Consensus        54 ~~~v~~a~~~~~-~~~~~~~y~---~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~--~~~~  127 (410)
                      +|.+.+++.+.. ... .+.|.   ...|..++++++.+++.+.+|.+    +..+..++|+++.+..+. +.+  ...+
T Consensus        83 ~p~i~~~~~~~~~~~~-~tpYq~e~~sqG~lel~~~~~~~la~l~G~~----~~~l~~~~GA~a~~~~l~-~~r~~~~~~  156 (481)
T PRK04366         83 NPKINEKVARLPGFAE-LHPLQPEETVQGALELMYELQEWLKEITGMD----AVTLQPAAGAHGELTGLL-MIRAYHEAR  156 (481)
T ss_pred             CHHHHHHHHhCcchhc-CCCCCChhhhhHHHHHHHHHHHHHHHHhCCC----ceEEEeCcHHHHHHHHHH-HHHHHhhcc
Confidence            677777776652 223 36773   45688899999999988777752    334422334344433321 222  2457


Q ss_pred             CC----EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283          128 GA----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE  203 (410)
Q Consensus       128 gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~  203 (410)
                      ||    +|++++|+|+.+...++..|.+++.+++  +.++.+|++.+++.+.+   +++++++++|+ |||.+  ..+++
T Consensus       157 Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~--~~~~~~D~e~L~~~i~~---~t~~V~v~~Pn-~tG~~--~~dl~  228 (481)
T PRK04366        157 GDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS--NEDGLVDLEALKAAVGE---DTAALMLTNPN-TLGLF--ERNIL  228 (481)
T ss_pred             CcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec--CCCCCcCHHHHHhhccc---CCeEEEEeCCC-Ccccc--chHHH
Confidence            76    9999999999999999999999999988  34578999999998875   67777778888 99963  35799


Q ss_pred             HHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc----CCCcceEEEEeCCchhHHH
Q 015283          204 KIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY----AERIGAMNVVCSSSDLAAR  279 (410)
Q Consensus       204 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~l~~~~~~~~~~~~  279 (410)
                      +|+++|+++|+++++|.++..-..+..+         ....+.+++++|.+|.++.|    |-.+|++.+   .++..++
T Consensus       229 eI~~~a~~~gal~iVD~a~~~~~~g~~~---------~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~---~~~~~~~  296 (481)
T PRK04366        229 EIAEIVHEAGGLLYYDGANLNAILGKAR---------PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGV---KEELAPF  296 (481)
T ss_pred             HHHHHHHHcCCEEEEEecChhhhcccCC---------ccccCCCEEEEechhhcCCCCCCCCCCeeeeee---hhhhHhh
Confidence            9999999999999999996321111010         11234678899999988643    445677644   4554433


Q ss_pred             HHHHH---H--h---------hccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          280 VKSQL---K--R---------LARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       280 ~~~~~---~--~---------~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      +...+   .  .         ..+.... ........++...+...     -.+.++++.++..++.+++.+.|. ++ .
T Consensus       297 lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~-----G~~Gl~~~a~~~~~~a~~l~~~L~-~~-~  369 (481)
T PRK04366        297 LPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSL-----GAEGLREVSEDAVLNANYLKARLK-DI-Y  369 (481)
T ss_pred             CCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhH-hh-C
Confidence            31100   0  0         0000000 11112222222222211     133456777777888999999998 65 1


Q ss_pred             CCCcccccCCcceeee--c-----CCCHH-HHHHhhhcCcEEEc----C---CC--eEEecC-CCcccHHHHHHHHHHHh
Q 015283          345 GKDWSFILRQIGMFSF--T-----GLNKA-QSDNMTNKWHVYMT----K---DG--RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       345 ~~~~~~~~~~~~~~~~--~-----~~~~~-~~~~ll~~~gi~v~----~---~g--Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                      .  +.+..+....+++  .     +.+.. ..++|.+ +||.+.    |   .+  |+++.- .|+++|+++++.|+++.
T Consensus       370 ~--~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~-~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~  446 (481)
T PRK04366        370 D--LPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLD-YGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIA  446 (481)
T ss_pred             c--ccCCCCeeEEEEEECccccccCCCHHHHHHHHHH-CCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHH
Confidence            1  1211111111222  1     22444 4555554 698864    1   23  777653 38899999999999887


Q ss_pred             hh
Q 015283          407 HN  408 (410)
Q Consensus       407 ~~  408 (410)
                      ++
T Consensus       447 ~~  448 (481)
T PRK04366        447 EE  448 (481)
T ss_pred             HH
Confidence            64

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.82  E-value=9e-18  Score=158.55  Aligned_cols=219  Identities=12%  Similarity=0.068  Sum_probs=148.2

Q ss_pred             ccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh---
Q 015283           71 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---  145 (410)
Q Consensus        71 ~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~---  145 (410)
                      ..|..  ..+...|+++++++...        +++++  ++||++|+..+  +.+.+.+||+|++++|.|+++...+   
T Consensus        53 ~~Y~r~~npt~~~Le~~iA~le~~--------~~~~~--~~sG~~Ai~~~--l~all~~GD~Vvv~~~~Y~~t~~l~~~~  120 (394)
T PRK09028         53 MFYGRRGTPTHFAFQAAIVELEGG--------AGTAL--YPSGAAAISNA--LLSFLKAGDHLLMVDSCYEPTRDLCDKI  120 (394)
T ss_pred             ceecCCCCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence            34654  34557999999998522        35666  89999999988  4555889999999999998887544   


Q ss_pred             -hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC
Q 015283          146 -NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG  224 (410)
Q Consensus       146 -~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~  224 (410)
                       ...|.++..++.       .+.+.+++.+.+   +++++++++|+||||.   ..++++|+++|+++|+++|+|++|..
T Consensus       121 l~~~Gi~v~~v~~-------~~~e~l~~~l~~---~TklV~lespsNPtg~---v~dl~~I~~la~~~g~~lvvD~t~a~  187 (394)
T PRK09028        121 LKGFGIETTYYDP-------MIGEGIRELIRP---NTKVLFLESPGSITME---VQDVPTLSRIAHEHDIVVMLDNTWAS  187 (394)
T ss_pred             hhhcceEEEEECC-------CCHHHHHHhcCc---CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCccc
Confidence             356666655542       144677777764   7888889999999988   68899999999999999999999875


Q ss_pred             CCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH
Q 015283          225 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV  303 (410)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  303 (410)
                      ...  .  .  ++     ..+.++++.|.+|.++-+ ....|++   +.+++..+++.....    ......+......+
T Consensus       188 p~~--~--~--Pl-----~~GaDivv~S~tK~l~Gh~d~~~G~~---~~~~~~~~~l~~~~~----~~G~~~~p~~a~l~  249 (394)
T PRK09028        188 PIN--S--R--PF-----EMGVDISIQAATKYIVGHSDVMLGTA---TANEKHWDQLREHSY----LMGQCTSPDDVYLA  249 (394)
T ss_pred             ccc--C--C--cc-----ccCceEEEEeCCeEecCCCCEEEEEE---ECCHHHHHHHHHHHH----hcCCCCCHHHHHHH
Confidence            331  1  1  11     224689999999999434 4545653   346665555443222    12223444444444


Q ss_pred             HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          304 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .+-|+.-          .-..++..++...+.+.|+ +.+
T Consensus       250 ~rgl~TL----------~lR~~~~~~na~~la~~L~-~~p  278 (394)
T PRK09028        250 MRGLRTL----------GVRLAQHEKNALKVANWLA-TRP  278 (394)
T ss_pred             HcccCcH----------HHHHHHHHHHHHHHHHHHh-cCC
Confidence            4444443          3444555667777777787 664

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.82  E-value=7.1e-18  Score=158.69  Aligned_cols=280  Identities=16%  Similarity=0.134  Sum_probs=177.8

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV  150 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~  150 (410)
                      .+| +.....+|+++++++..        .+++++  ++||++|+.++.   ..+.+||+|+++.+.|+.....+.....
T Consensus        49 ~R~-~~p~~~~le~~lA~leg--------~~~~v~--~~sG~aAi~~~l---~~l~~GD~VI~~~~~yg~~~~~~~~~~~  114 (364)
T PRK07269         49 TRT-KNPTRAKLEETLAAIES--------ADYALA--TSSGMSAIVLAF---SVFPVGSKVVAVRDLYGGSFRWFNQQEK  114 (364)
T ss_pred             eCC-CCccHHHHHHHHHHHhC--------CCeEEE--eCCHHHHHHHHH---HHhCCCCEEEEecCCcCchHHHHHHHHh
Confidence            444 45678899999999962        356777  899999999873   3468999999999998765544332111


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      +. .+..    .+..|++.+++.+.+   +++++++++|+||||.+.   ++++|+++|+++|+++|+|++|......  
T Consensus       115 ~~-~~~~----~~~~d~~~l~~~i~~---~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~--  181 (364)
T PRK07269        115 EG-RFHF----TYANTEEELIAAIEE---DTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ--  181 (364)
T ss_pred             cC-cEEE----EecCCHHHHHHhcCc---CceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC--
Confidence            10 1111    233588999988875   678888899999999854   7788888899999999999997543221  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCC-cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r-~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                        .  ++     ....++++.|++|.++-+|-- .|++  ++++++++++++.... .   .....+...+..+...|+.
T Consensus       182 --~--pl-----~~gaDivv~S~tK~l~g~~d~~gG~v--~~~~~~l~~~~~~~~~-~---~G~~~s~~~a~l~~~~L~t  246 (364)
T PRK07269        182 --R--PI-----ELGADIVLHSATKYLSGHNDVLAGVV--VTNDLELYEKLFYNLN-T---TGAVLSPFDSYLLMRGLKT  246 (364)
T ss_pred             --C--ch-----hhCCcEEEecCceeccCCCcccceEE--EeCcHHHHHHHHHHHH-H---hCCCCCHHHHHHHHcCCCc
Confidence              1  11     113468899999999754432 3564  4556776666653221 1   1123344444444555543


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhh-------------cCc
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTN-------------KWH  376 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-------------~~g  376 (410)
                      -          ....++.+++...+.+.|+ ..+.-. ...+++.+|.+.|.-...+.+.++++             ..+
T Consensus       247 L----------~~r~~~~~~na~~~a~~L~-~~p~v~-~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~s  314 (364)
T PRK07269        247 L----------SLRMERSTANAQEVVAFLK-KSPAVK-EVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVES  314 (364)
T ss_pred             H----------HHHHHHHHHHHHHHHHHHH-hCCCcc-EEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCe
Confidence            2          3445555667777777777 654211 13446777877664222222222222             123


Q ss_pred             EEEcCC-------------------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          377 VYMTKD-------------------G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       377 i~v~~~-------------------g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      +.+.|.                   +  |+|++-   |+.+.+++-|.++++
T Consensus       315 l~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~  363 (364)
T PRK07269        315 LITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE  363 (364)
T ss_pred             EeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence            333342                   1  899854   889999999999875

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.82  E-value=6.3e-18  Score=163.10  Aligned_cols=344  Identities=12%  Similarity=0.072  Sum_probs=194.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc---cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++......   .| +.....++.+.+++.....      .+.+.+  +++
T Consensus        42 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~------~~~v~f--~~s  110 (423)
T PRK05964         42 RELIDAISSWWVATHGHN--HPYIDQAIREQLDRLDHVIFAGF-THEPAERLAQRLVALTPGG------LDHVFF--SDS  110 (423)
T ss_pred             CEEEEcchhHHhccCCCC--CHHHHHHHHHHHhhCCCcccccc-CCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence            467898887543345665  588999988887542111   12 2222335555555553211      357888  999


Q ss_pred             hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhhhh-CCC------------CccceeeecCCCcccChhhHH
Q 015283          111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFND-ARV------------PWSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~~~d~~~l~  171 (410)
                      |++|++.+.++.+.+.     +| .+|+..+.+|.+....... .+.            .+..++....+....+++.++
T Consensus       111 GseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~  190 (423)
T PRK05964        111 GSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALE  190 (423)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHH
Confidence            9999999988887661     23 6888888888665432211 111            112222211110112277788


Q ss_pred             HHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          172 ADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       172 ~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +.+.+.++...++++.. .++.+|... +.+.+++|.++|++||+++|+||++.+++..   ...+.... .+..+++  
T Consensus       191 ~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---G~~~a~~~-~~v~pDi--  264 (423)
T PRK05964        191 ALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRT---GTLFACEQ-AGVSPDI--  264 (423)
T ss_pred             HHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---cchhHHHh-cCCCCCe--
Confidence            88865444555555444 477788766 7888999999999999999999999887642   12222211 1122233  


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHH--HHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ--LKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                       .+++|.++.+++++|+++.   ++++.+.+...  -.......+.+...++..++...|+--      +  -+...+++
T Consensus       265 -~~~~K~l~gG~~p~~av~~---~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l------~--~~~~~~~~  332 (423)
T PRK05964        265 -MCLSKGLTGGYLPLAATLC---TAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLF------E--DEPVLERV  332 (423)
T ss_pred             -eeeehhhhcCcccceEEEE---cHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHH------H--hcCHHHHH
Confidence             3778999744489999654   77865554321  000111111123334434443333210      0  01234555


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---C----H-HHHHHhhhcCcEEEcCCC---eEEecC-CCcccH
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---N----K-AQSDNMTNKWHVYMTKDG---RISLAG-LSLAKC  395 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~----~-~~~~~ll~~~gi~v~~~g---Ris~~~-~~~~~i  395 (410)
                      +++.+++.+.|+ ++.....+...... |.+..+.+   .    . .+...+++ +||.+.+.+   ||+.+. .|++++
T Consensus       333 ~~~g~~l~~~l~-~l~~~~~i~~vrg~-Gl~~~i~l~~~~~~~~~~~l~~~l~~-~Gv~v~~~~~~lR~~p~l~~t~edI  409 (423)
T PRK05964        333 AALSAGLAEGLE-PFRDLPGVADVRVL-GAIGAVELDRPVLERDGPALRAFALE-RGVLLRPLGNTIYLMPPYIITAEEL  409 (423)
T ss_pred             HHHHHHHHHHHH-hhccCCCeEEeecc-cEEEEEEeccCcchhHHHHHHHHHHH-CCeEEEecCCEEEEeCCcccCHHHH
Confidence            556666666665 44210011112222 33322211   1    2 23445554 699998765   888552 499999


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      ++++++|++++.++
T Consensus       410 d~~v~~l~~al~~~  423 (423)
T PRK05964        410 DRITDAIVEVADEL  423 (423)
T ss_pred             HHHHHHHHHHHhhC
Confidence            99999999998764

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.81  E-value=6.8e-18  Score=161.94  Aligned_cols=158  Identities=19%  Similarity=0.141  Sum_probs=121.0

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~  151 (410)
                      ......|.+.++++...        +..++  +++|++|+..+  +.+.+.+||+|+++.+.|++..    ..++..|.+
T Consensus        63 ~p~~~~Le~~lA~leg~--------~~al~--~~sG~~Ai~~a--l~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~  130 (431)
T PRK08248         63 NPTTDVFEKRIAALEGG--------IGALA--VSSGQAAITYS--ILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT  130 (431)
T ss_pred             CchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence            44567899999999532        23445  79999999988  4555789999999999987543    345678888


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      ++.++.       .|++.+++.+++   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|.... .   
T Consensus       131 v~~vd~-------~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~-~---  193 (431)
T PRK08248        131 VKFVDP-------SDPENFEAAITD---KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPY-L---  193 (431)
T ss_pred             EEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccc-c---
Confidence            888875       378899988875   5777777899999999776   4577788999999999999975311 1   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      ..  ++     ..+.++++.|++|.+|.+|.++|++++
T Consensus       194 ~~--pl-----~~gaDivv~S~tK~lgg~g~~~Gg~v~  224 (431)
T PRK08248        194 LR--PI-----EHGADIVVHSATKFIGGHGTSIGGVIV  224 (431)
T ss_pred             CC--hh-----HcCCCEEEEcCccccCCCCCceEEEEE
Confidence            11  11     234678899999999999999999854

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.81  E-value=8.6e-18  Score=160.01  Aligned_cols=167  Identities=18%  Similarity=0.174  Sum_probs=120.8

Q ss_pred             cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCCCc
Q 015283           77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW  152 (410)
Q Consensus        77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~  152 (410)
                      ....++++.++++...       +..+++   ++|+.++..+  + ..+.+||+|++++|.|++..    ..++..|.++
T Consensus        54 p~~~~le~~lA~l~g~-------~~~v~~---~sG~~ai~~~--l-~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v  120 (390)
T PRK08064         54 PTREALEDIIAELEGG-------TKGFAF---ASGMAAISTA--F-LLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEH  120 (390)
T ss_pred             hhHHHHHHHHHHHhCC-------CCeEEE---CCHHHHHHHH--H-HHhCCCCEEEEccCccchHHHHHHHHHHHcCCEE
Confidence            3467899999999533       234544   7778888766  3 35779999999999998543    4455688888


Q ss_pred             cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283          153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN  232 (410)
Q Consensus       153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~  232 (410)
                      +.++.       .|++.+++.+++   +++++++++|+||||.+.   ++++|.++|+++|+++|+|++|..+...   .
T Consensus       121 ~~v~~-------~d~~~l~~~l~~---~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~~---~  184 (390)
T PRK08064        121 TFVDM-------TNLEEVAQNIKP---NTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLLQ---K  184 (390)
T ss_pred             EEECC-------CCHHHHHHhcCC---CceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCccccc---C
Confidence            88875       267888888865   678888899999999965   5667777799999999999998765421   0


Q ss_pred             chhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHH
Q 015283          233 DASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       233 ~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                         ++     ..+.++++.|++|.++ .+|...|++  +++++++++++..
T Consensus       185 ---~~-----~~g~Divv~S~tK~~~G~~~~laG~~--v~~~~~~~~~l~~  225 (390)
T PRK08064        185 ---PL-----DLGADVVLHSATKFLAGHSDVLAGLA--VVKDEELAQKLYF  225 (390)
T ss_pred             ---ch-----hhCCcEEEeecceeccCCccceeEEE--EeCCHHHHHHHHH
Confidence               11     1135688999999985 344556776  3456676666554

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.80  E-value=2e-17  Score=157.87  Aligned_cols=199  Identities=17%  Similarity=0.071  Sum_probs=137.5

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCC
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA  129 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd  129 (410)
                      |.+.+..++++.+.+..+.   |.......++++++++++...        +.++  +++|++|+.++.  ... +.+||
T Consensus         6 ~~~~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~~--------~~v~--~~sgt~al~~~l--~al~~~~Gd   70 (380)
T TIGR03588         6 QSIDQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGAK--------YAVA--FNSATSALHIAC--LALGVGPGD   70 (380)
T ss_pred             CCCCHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCCC--------eEEE--EcCHHHHHHHHH--HHcCCCCCC
Confidence            3345666777777765543   434456789999999997442        2334  578999999873  333 56999


Q ss_pred             EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 015283          130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADV  208 (410)
Q Consensus       130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~  208 (410)
                      +|+++.++|..+...+...|++++.+++. .+++.+|++++++.+++.+ +++++++   +.|++|..   .++++|.++
T Consensus        71 ~Viv~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~t~~v~---~~~~~G~~---~~~~~i~~l  143 (380)
T TIGR03588        71 RVWTTPITFVATANCALYCGAKVDFVDID-PDTGNIDEDALEKKLAAAKGKLPKAIV---PVDFAGKS---VDMQAIAAL  143 (380)
T ss_pred             EEEeCCcchHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHhhcccCCCceEEE---EeCCCCcc---CCHHHHHHH
Confidence            99999999999999999999999999984 3567899999999997311 2566666   45678984   457888888


Q ss_pred             HHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHH
Q 015283          209 IQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       209 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                      |++||++||+|++++....  .+....+     .....++.+.|++  |.++. | ..|++  ++.++++.++++.
T Consensus       144 ~~~~~~~lI~D~a~a~g~~--~~~~~~g-----~~~~~d~~~~S~~~~K~~~~-~-~GG~v--~~~~~~~~~~~~~  208 (380)
T TIGR03588       144 AKKHGLKIIEDASHALGAE--YGGKPVG-----NCRYADATVFSFHPVKIITT-A-EGGAV--TTNDEELAERMRL  208 (380)
T ss_pred             HHHcCCEEEEECCCcccCc--cCCEeCC-----CccccceEEEecCCCCcccc-c-CceEE--EECCHHHHHHHHH
Confidence            9999999999999764331  1111111     1001256666765  88764 3 34555  5667777766654

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.80  E-value=6.6e-19  Score=161.81  Aligned_cols=174  Identities=15%  Similarity=0.003  Sum_probs=126.9

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV  150 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~  150 (410)
                      ..+.|..-+.++++.+++++..       .+-+++  ++|+|+++..+  +...+.+||+|+++.++|.++...+...|+
T Consensus        53 ~l~~~~g~i~~~~~~~A~~~ga-------~~~~~~--~~Gst~a~~~~--l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~  121 (294)
T cd00615          53 DLLDPTGPIKEAQELAARAFGA-------KHTFFL--VNGTSSSNKAV--ILAVCGPGDKILIDRNCHKSVINGLVLSGA  121 (294)
T ss_pred             CCCCCChHHHHHHHHHHHHhCC-------CCEEEE--cCcHHHHHHHH--HHHcCCCCCEEEEeCCchHHHHHHHHHCCC
Confidence            3344555578999999998643       233444  78889999887  455578999999999999999888888999


Q ss_pred             CccceeeecCCC----cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCC-
Q 015283          151 PWSEYRYYDPKT----VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF-  225 (410)
Q Consensus       151 ~~~~v~~~~~~~----~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~-  225 (410)
                      +++.++......    ..+|++.+++.+++. ++++++++++| ||||.+.+   +++|+++|+++|+++++||+|... 
T Consensus       122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~  196 (294)
T cd00615         122 VPVYLKPERNPYYGIAGGIPPETFKKALIEH-PDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHF  196 (294)
T ss_pred             EEEEecCccCcccCcCCCCCHHHHHHHHHhC-CCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhh
Confidence            888886632222    368999999998753 34666666788 79999775   678888899999999999998653 


Q ss_pred             CCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          226 ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      .+.+   .. ..  .....+.++++.|++|++  +|++.|+++
T Consensus       197 ~~~~---~~-~~--~~~~~~~div~~S~hK~l--~g~~~~~~l  231 (294)
T cd00615         197 RFHP---IL-PS--SAAMAGADIVVQSTHKTL--PALTQGSMI  231 (294)
T ss_pred             ccCc---cc-Cc--chhhcCCcEEEEchhccc--chHhHHHHH
Confidence            2221   00 11  111235789999999985  678776653

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK05939 hypothetical protein; Provisional

Probab=99.80  E-value=2.7e-17  Score=156.43  Aligned_cols=155  Identities=15%  Similarity=0.148  Sum_probs=120.1

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccce
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEY  155 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v  155 (410)
                      ...++++++++....       ..+++   ++|+.|+..+  +...+.+||+|+++++.|+.+..   .++..|.+++.+
T Consensus        49 ~~~lE~~la~leg~~-------~~v~~---ssG~~Ai~~~--l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v  116 (397)
T PRK05939         49 TAALEAKITKMEGGV-------GTVCF---ATGMAAIAAV--FLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV  116 (397)
T ss_pred             HHHHHHHHHHHhCCC-------eEEEe---CCHHHHHHHH--HHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE
Confidence            459999999985332       34544   7778999887  44457899999999999987644   455678888877


Q ss_pred             eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283          156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS  235 (410)
Q Consensus       156 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~  235 (410)
                      +.       .|++++++.+.+   +++++++++|+||||.   ..++++|+++|+++|+++|+|++|.....  .++   
T Consensus       117 ~~-------~d~e~l~~~l~~---~tklV~vesp~NptG~---v~dl~~I~~la~~~gi~livD~t~a~~~~--~~~---  178 (397)
T PRK05939        117 DA-------TDVQNVAAAIRP---NTRMVFVETIANPGTQ---VADLAGIGALCRERGLLYVVDNTMTSPWL--FRP---  178 (397)
T ss_pred             CC-------CCHHHHHHhCCC---CCeEEEEECCCCCCCC---HHhHHHHHHHHHHcCCEEEEECCcccccc--cCc---
Confidence            65       378999988864   6788888999999999   57899999999999999999999754321  110   


Q ss_pred             HhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          236 SVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       236 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                            ...+.++++.|+||.++..|.++|++++
T Consensus       179 ------~~~gaDivv~S~sK~~~g~g~~igg~v~  206 (397)
T PRK05939        179 ------KDVGASLVINSLSKYIAGHGNALGGAVT  206 (397)
T ss_pred             ------cccCCEEEEecCeecccCCCCeEEEEEe
Confidence                  0124679999999999989999999743

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.80  E-value=3.8e-17  Score=150.61  Aligned_cols=196  Identities=22%  Similarity=0.184  Sum_probs=145.4

Q ss_pred             ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEE
Q 015283           53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL  132 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl  132 (410)
                      +.+..++++.+.+.+++...   ..-..++.+++++|+..+        ..+.  +++||.|++++.+.+. +.|||+|+
T Consensus        13 i~~~e~~~v~~vl~sg~i~~---G~~v~~FE~~~ae~~G~k--------~ava--~~sgT~AL~laL~al~-ig~GDeVI   78 (374)
T COG0399          13 IGEEELAAVQEVLKSGWLTG---GPFVRRFEQAFAEYLGVK--------YAVA--VSSGTAALHLALLALA-IGPGDEVI   78 (374)
T ss_pred             cchHHHHHHHHHHHcCCeec---ChHHHHHHHHHHHHhCCC--------eEEE--ecChHHHHHHHHHhcC-CCCCCEEE
Confidence            45777788888887766222   234679999999996443        4544  6999999999854333 77999999


Q ss_pred             EcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 015283          133 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK  212 (410)
Q Consensus       133 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~  212 (410)
                      +++-+|....+.+...|++++.++. +.+++.+|++.+++.|.+   ++++|+   |-+-.|.   ..++++|.++|++|
T Consensus        79 ~ps~TfvATan~i~~~Ga~PVFvDi-d~~T~nid~~~ie~aIt~---~tKAIi---pVhl~G~---~~dm~~i~~la~~~  148 (374)
T COG0399          79 VPSFTFVATANAVLLVGAKPVFVDI-DPDTLNIDPDLIEAAITP---RTKAII---PVHLAGQ---PCDMDAIMALAKRH  148 (374)
T ss_pred             ecCCchHHHHHHHHHcCCeEEEEec-CCcccCCCHHHHHHHccc---CCeEEE---EehhccC---CCCHHHHHHHHHHc
Confidence            9999999999999999999999998 467899999999999986   688888   4566787   55888888889999


Q ss_pred             CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          213 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       213 ~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      |++||+|.+ +.++.. +...     +....+  ++.++||  +|.++ +|. .|.+  ++.+++++++++..-.
T Consensus       149 ~l~vIEDaA-qa~Ga~-y~gk-----~vGt~G--d~~~fSF~~~K~it-tgE-GGav--~tnd~ela~k~~~lr~  210 (374)
T COG0399         149 GLPVIEDAA-QAHGAT-YKGK-----KVGSFG--DIGAFSFHATKNLT-TGE-GGAV--VTNDEELAEKARSLRN  210 (374)
T ss_pred             CCeEEEEcc-hhccCe-ecCc-----cccccc--ceEEEEecCCCCcc-ccC-ceEE--EeCCHHHHHHHHHHHH
Confidence            999999999 444432 1111     112222  3444455  88887 453 3555  6888888887766443

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.80  E-value=1.9e-17  Score=157.47  Aligned_cols=195  Identities=18%  Similarity=0.131  Sum_probs=132.0

Q ss_pred             ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEE
Q 015283           53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL  132 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl  132 (410)
                      ..+.-.+++.+.+..+.  .|+    ..++++++.+++.+..+    .+++++  ++||++++.++... ..+.+||+|+
T Consensus         9 ~~~~~~~~~~~~l~~~~--~~g----~~~~~~~~e~~la~~~g----~~~~v~--~~sgt~al~~~l~~-~~~~~Gd~Vi   75 (375)
T PRK11706          9 VVGTELDYIQQAMSSGK--LCG----DGGFTRRCQQWLEQRFG----SAKVLL--TPSCTAALEMAALL-LDIQPGDEVI   75 (375)
T ss_pred             CCHHHHHHHHHHHHcCC--ccC----CCHHHHHHHHHHHHHhC----CCeEEE--ECCHHHHHHHHHHH-hCCCCCCEEE
Confidence            34555666666665432  221    22445555554433333    367888  89999999886322 1256999999


Q ss_pred             EcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 015283          133 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK  212 (410)
Q Consensus       133 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~  212 (410)
                      ++.|+|..+...+...|++++.+++. .+++.+|++++++.+.+   +++++++   .|+||..   .++++|.++|+++
T Consensus        76 v~~~t~~~~~~~~~~~G~~~v~~d~d-~~~~~~d~~~le~~i~~---~tk~i~~---~~~~G~~---~~~~~i~~la~~~  145 (375)
T PRK11706         76 MPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIEAAITP---KTRAIVP---VHYAGVA---CEMDTIMALAKKH  145 (375)
T ss_pred             ECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhcCC---CCeEEEE---eCCCCCc---cCHHHHHHHHHHc
Confidence            99999999999999999999999874 45678999999998875   5666663   3679984   5677888889999


Q ss_pred             CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHHH
Q 015283          213 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQ  283 (410)
Q Consensus       213 ~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~  283 (410)
                      |++||+|++|+.+...  +...     ....  ..+.+.||+  |.++ +|.+.++   ++.++++++++...
T Consensus       146 ~i~vIeD~a~a~g~~~--~~~~-----~g~~--~~~~~~Sf~~~K~l~-~g~gG~~---~~~~~~~~~~~~~~  205 (375)
T PRK11706        146 NLFVVEDAAQGVMSTY--KGRA-----LGTI--GHIGCFSFHETKNYT-AGEGGAL---LINDPALIERAEII  205 (375)
T ss_pred             CCEEEEECcccccccc--CCee-----eecC--cCEEEEeCCCCcccc-ccCCeEE---EECCHHHHHHHHHH
Confidence            9999999997765521  1111     0111  133444544  9997 5777555   45677877765553

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.80  E-value=1.7e-17  Score=160.64  Aligned_cols=341  Identities=11%  Similarity=0.033  Sum_probs=188.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|.--...|+.  .|.+.+++.+++.......+  .....+.+..+++.+....... ..+.+.+  +++|++
T Consensus        56 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~~-~~~~v~f--~~sGse  128 (443)
T PRK06058         56 NRLIDLGSGIAVTSVGNS--APRVVEAVREQVARFTHTCF--MVTPYEGYVAVAEQLNRLTPGD-HEKRSAL--FNSGAE  128 (443)
T ss_pred             CEEEEcCcchhhhccCCC--CHHHHHHHHHHHHhccCccc--cccCCHHHHHHHHHHHHhCCCC-CCCEEEE--eCCcHH
Confidence            456777766532344554  58999998888754211111  1112234444444443322100 0247888  899999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CC--------C-----CccceeeecC--C--CcccC--------h
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDP--K--TVGLD--------F  167 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g--------~-----~~~~v~~~~~--~--~~~~d--------~  167 (410)
                      |++.+.++.+.+...++|+....+|.++...... .+        .     .+..++....  +  ....+        +
T Consensus       129 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (443)
T PRK06058        129 AVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAI  208 (443)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHH
Confidence            9999988887776668999999999777532221 11        0     1111221000  0  00011        1


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCC-CCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPT-GIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPt-G~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      +.+++.+.  +++..+++ ..|-+.. |... +.+.+++|.++|++||+++|.||++.+|+..   ...+.... .+..+
T Consensus       209 ~~l~~~~~--~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRt---G~~fa~~~-~gv~P  281 (443)
T PRK06058        209 TVIEKQVG--ADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFART---GAWFACEH-EGIVP  281 (443)
T ss_pred             HHHHHhhC--CCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---hhhhHHHh-cCCCC
Confidence            12222222  23455555 3454554 5443 4667999999999999999999999988632   22332222 12223


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      +++   +++|.++ +|+++|++++   ++++.+.+    .......+.+...+++.++...|+.  +.    +  +...+
T Consensus       282 Div---~~gK~l~-~G~Pi~av~~---~~~i~~~~----~~~~~~~T~~gnpl~~aaa~a~L~~--~~----~--~~l~~  342 (443)
T PRK06058        282 DLI---TTAKGIA-GGLPLSAVTG---RAEIMDAP----HPGGLGGTYGGNPVACAAALAAIET--IE----E--DDLVA  342 (443)
T ss_pred             CEE---EEccccc-CCCccEEEEE---cHHHHhhc----cCCCCCCCCCCCHHHHHHHHHHHHH--HH----H--cCHHH
Confidence            444   4589999 8999999755   77754443    2222222334555555555544431  10    0  13445


Q ss_pred             HHHHHHHHHHHHhhhccCCCCC-cccccCCcceeee--cCC-----CHH----HHHHhhhcCcEEEcCCC------eEEe
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFSF--TGL-----NKA----QSDNMTNKWHVYMTKDG------RISL  387 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~--~~~-----~~~----~~~~ll~~~gi~v~~~g------Ris~  387 (410)
                      +++++.+++.+.|+ ++....+ +..+...+.++.+  ...     +.+    +...+++ +||.+.+++      ||..
T Consensus       343 ~~~~~g~~l~~~L~-~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~lr~~P  420 (443)
T PRK06058        343 RARQIEALMTDRLR-ALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHA-AGVIVLTCGTYGNVIRLLP  420 (443)
T ss_pred             HHHHHHHHHHHHHH-HHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHH-CCeEEeccCCCCCEEEEEC
Confidence            56666666666665 5421111 1223444444422  111     122    2344444 699998753      6753


Q ss_pred             c-CCCcccHHHHHHHHHHHhhhc
Q 015283          388 A-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       388 ~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      + ..|++++++++++|+++++++
T Consensus       421 pl~~t~~~i~~~~~~l~~~l~~~  443 (443)
T PRK06058        421 PLVIGDELLREGLDVLEAALADL  443 (443)
T ss_pred             CCccCHHHHHHHHHHHHHHHHhC
Confidence            3 249999999999999998753

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.80  E-value=2.5e-17  Score=158.22  Aligned_cols=324  Identities=15%  Similarity=0.142  Sum_probs=185.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc------CcCCcccHHHHH----HHHHHhcCCCCCcccCCce
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNK----VTAELLFGADNSVLKEQRV  103 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~----aia~~~~~~~~~~~~~~~i  103 (410)
                      ...+||-.+++       +++|.+++++...+...+..+      |.....+.++.+    .+++++...       .-+
T Consensus        28 ~~~~~l~~sen-------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~-------~al   93 (416)
T PRK13034         28 QDHLELIASEN-------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD-------YAN   93 (416)
T ss_pred             hcCeeeccccc-------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC-------ceE
Confidence            35677776553       247999999887741211111      212234567777    888885332       222


Q ss_pred             EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcch-hhhhhh--CCCCc--cceeeecCCCcccChhhHHHHHhcCC
Q 015283          104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFND--ARVPW--SEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~~~~~~--~g~~~--~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      ++  +++|+.|+..+  +.+.+.+||+|+++..+|.+. ...++.  .+...  ..+++ +..++.+|++++++.++.. 
T Consensus        94 v~--~~SG~~A~~~~--l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~-  167 (416)
T PRK13034         94 VQ--PHSGSQANGAV--YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGV-DRLTGLIDYDEVEELAKEH-  167 (416)
T ss_pred             Ee--cCCcHHHHHHH--HHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccc-ccccCCcCHHHHHHHHhhc-
Confidence            33  58899999988  455578999999999988763 222221  12111  12332 2335668999999888652 


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                       +++++++..+.  +|.   ..++.+|.++|++||+++++|+++...... .+.   .   .......+++++|++|.++
T Consensus       168 -~~klVi~~~~~--~g~---~~dl~~l~~la~~~g~~livD~Aha~G~~~-~g~---~---~~~~~~~Di~~~s~~K~l~  234 (416)
T PRK13034        168 -KPKLIIAGFSA--YPR---ELDFARFREIADEVGALLMVDMAHIAGLVA-AGE---H---PNPFPHAHVVTTTTHKTLR  234 (416)
T ss_pred             -CCeEEEECCCc--ccc---ccCHHHHHHHHHHcCCEEEEeCcccccCcc-cCC---C---CCCCCCceEEEEeCcccCC
Confidence             45666654443  466   446667777799999999999996543322 111   0   0111235788999999984


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcc-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      .+.  .|++  ++.++++.+++    +......+ +.+......++...+..  .   ......++++++.++.+++.+.
T Consensus       235 g~~--GG~v--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~aa~~~al~~--~---~~~~~~~~~~~l~~~a~~l~~~  301 (416)
T PRK13034        235 GPR--GGMI--LTNDEEIAKKI----NSAVFPGLQGGPLMHVIAAKAVAFGE--A---LQPEFKTYAKQVIANAQALAEV  301 (416)
T ss_pred             CCC--CeEE--EECcHHHHHHH----HhhcCCcccCCccHHHHHHHHHHHHH--H---hChhHHHHHHHHHHHHHHHHHH
Confidence            222  2554  34444433332    22222221 11222111111111111  0   0011235678899999999999


Q ss_pred             hhhccCCCCCccccc--CCccee-eecCC---CHHHHHHhhhcCcEEEcC----------C---C-eEEec-----CCCc
Q 015283          338 LSAKDKSGKDWSFIL--RQIGMF-SFTGL---NKAQSDNMTNKWHVYMTK----------D---G-RISLA-----GLSL  392 (410)
Q Consensus       338 l~~~~g~~~~~~~~~--~~~~~~-~~~~~---~~~~~~~ll~~~gi~v~~----------~---g-Ris~~-----~~~~  392 (410)
                      |. +.|+    ....  +.+... +.++.   +...+.+.|++.||.+.+          .   + |+++.     +.++
T Consensus       302 L~-~~G~----~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~  376 (416)
T PRK13034        302 LK-ERGY----DLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGE  376 (416)
T ss_pred             HH-HcCC----EeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCH
Confidence            98 8874    3322  222222 22232   455565666667999864          1   2 87743     3478


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      ++++++++.|++++..
T Consensus       377 ~di~~l~~~l~~~~~~  392 (416)
T PRK13034        377 AEFREIANWILDVLDD  392 (416)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999988764

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.80  E-value=3.8e-17  Score=146.01  Aligned_cols=313  Identities=17%  Similarity=0.078  Sum_probs=199.4

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI  133 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~  133 (410)
                      .|.+.+++.++...+ +..|+..+-..++.+.+++.+.+        +.++|  +.+||+++.++  +...+.||+.|++
T Consensus        13 ~~~m~eam~~a~~~~-~~~YG~D~~~~~~e~~~ae~~g~--------~a~~F--v~sGT~aN~la--l~~~~~~~~~vi~   79 (342)
T COG2008          13 TPEMREALAAANAVG-DDVYGEDPTTNALEQRIAELFGK--------EAALF--VPSGTQANQLA--LAAHCQPGESVIC   79 (342)
T ss_pred             CHHHHHHHHhccccC-CCCCCCCHHHHHHHHHHHHHhCC--------ceEEE--ecCccHHHHHH--HHHhcCCCCeEEE
Confidence            699999998876433 47787766667777777777422        57888  89999999998  5666789999999


Q ss_pred             cCCCCcchhhh--hhhCCCCccceeeecCCCcccChhhHHHHHhc----CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283          134 SSPTWGNHKNI--FNDARVPWSEYRYYDPKTVGLDFEGMIADIKA----APGGSFILLHGCAHNPTGIDPTPEQWEKIAD  207 (410)
Q Consensus       134 ~~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~  207 (410)
                      ..-.|....+.  .+..+ .+..++..+..++.++++++++.+..    +.+.+.++.. +.+|.-|+++|++++++|.+
T Consensus        80 ~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e-~~~te~GtVy~l~el~~i~~  157 (342)
T COG2008          80 HETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE-NTATEGGTVYPLDELEAISA  157 (342)
T ss_pred             eccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe-eccCCCceecCHHHHHHHHH
Confidence            88777544331  22222 23334444457788999999998874    2334444443 34446699999999999999


Q ss_pred             HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhh
Q 015283          208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL  287 (410)
Q Consensus       208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~  287 (410)
                      +|+++|+.|..|.+......-...++..   .+ .. ..+.+..++||..+.|   +|.+  +..+.+.++++....+..
T Consensus       158 ~~k~~~l~LHmDGAR~~nA~valg~~~~---~~-~~-~~D~v~~~~tK~g~~~---~gAi--v~gn~~~~~~a~~~rK~~  227 (342)
T COG2008         158 VCKEHGLPLHMDGARLANALVALGVALK---TI-KS-YVDSVSFCLTKGGGAP---VGAI--VFGNRDFAKRARRWRKRA  227 (342)
T ss_pred             HHHHhCCceeechHHHHHHHHHcCCCHH---HH-Hh-hCCEEEEecccCCcce---eeeE--EEcCHHHHHHHHHHHHHh
Confidence            9999999999999953322110111111   11 11 2556667889987655   4887  567888888776655533


Q ss_pred             ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCCCHH
Q 015283          288 ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGLNKA  366 (410)
Q Consensus       288 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~  366 (410)
                      -.. .. -..+........|++.-+        .....+-.+..+.|.+.|. .. |    ++...+..+..+|+.+...
T Consensus       228 Ggl-~~-k~r~laA~~~~~l~~~~~--------~~~~~Han~mA~~La~~~~-~~~G----~~~~~~~~tN~vf~~l~~~  292 (342)
T COG2008         228 GGL-MR-KARFLAAQGLYALEDDVW--------RLAADHANAMAARLAEGLE-AKPG----VKLAFPVETNMVFVRLPES  292 (342)
T ss_pred             ccc-Hh-hhhHHHHHHHHHHhccHH--------HHHHHHHHHHHHHHHHhhh-hcCC----ceeccCCcccEEEEECChH
Confidence            221 11 112212223444554321        2333444445788888887 44 5    3555555566777766433


Q ss_pred             HH-----HHhhhcCcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHh
Q 015283          367 QS-----DNMTNKWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       367 ~~-----~~ll~~~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                      ..     ...+...|+.+.+.+   ||..+. .+++++++++..++++.
T Consensus       293 ~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         293 AIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             HHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence            22     233334577777764   885332 38999999999998864

>PRK05968 hypothetical protein; Provisional

Probab=99.80  E-value=3.2e-17  Score=156.07  Aligned_cols=214  Identities=14%  Similarity=0.092  Sum_probs=139.5

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~  151 (410)
                      .....++++.+++++...       ..++   +++|+.|+.++  +...+.+||+|+++.+.|....    ..+...|.+
T Consensus        62 ~p~~~~le~~lA~l~g~~-------~av~---~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~  129 (389)
T PRK05968         62 NPTVRAFEEMLAKLEGAE-------DARG---FASGMAAISST--VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVE  129 (389)
T ss_pred             ChhHHHHHHHHHHHhCCC-------cEEE---ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCce
Confidence            334679999999996432       3344   47788888877  4445789999999999998643    455667888


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      ++.++.       .|++.+++.+.    +++++++++|.||   .++..++++|+++|+++|+++|+|++|.......  
T Consensus       130 v~~vd~-------~d~~~l~~~i~----~tklV~ie~pt~~---~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--  193 (389)
T PRK05968        130 VDYVDG-------RDEEAVAKALP----GAKLLYLESPTSW---VFELQDVAALAALAKRHGVVTMIDNSWASPVFQR--  193 (389)
T ss_pred             EEEeCC-------CCHHHHHHhcc----cCCEEEEECCCCC---CCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC--
Confidence            887764       27788888773    4556665555554   5558999999999999999999999987654221  


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                          ++    .. ..++++.|+||.++.+| .+.|+++   .+++.+++++.......   ....+...+.++...|+.-
T Consensus       194 ----p~----~~-g~Divv~S~tK~l~g~~~~~gG~i~---~~~~~~~~l~~~~~~~~---g~~~~~~~A~~~l~~L~tl  258 (389)
T PRK05968        194 ----PI----TL-GVDLVIHSASKYLGGHSDTVAGVVA---GSKEHIARINAEAYPYL---GAKLSPFEAWLLLRGLRTL  258 (389)
T ss_pred             ----ch----hc-CCcEEEeeccccccCCCCeEEEEEE---ECHHHHHHHHHHHHHhC---CCCCChHHHHHHHcccCcH
Confidence                11    11 23688889999998655 4678764   37777766654322111   1223334334444444432


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                                ....++-.++...+.+.|+ +.+
T Consensus       259 ----------~~r~~~~~~~a~~la~~L~-~~p  280 (389)
T PRK05968        259 ----------PLRMKAHEASALEIARRLK-AHP  280 (389)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence                      2333344445666777777 654

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.80  E-value=3.1e-17  Score=157.30  Aligned_cols=343  Identities=11%  Similarity=0.050  Sum_probs=193.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.. ...+.. .......++.+.+++.+....+  . .+.+.+. +++|
T Consensus        35 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~--~-~~~~~f~-~~sG  108 (412)
T TIGR02407        35 KEYIDFFAGAGALNYGHN--NPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG--L-DYKVQFP-GPTG  108 (412)
T ss_pred             CEEEEcccchhhccCCCC--CHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC--C-CceEEEe-CCCc
Confidence            568898887543344554  59999998887753 221111 1122223444444444211100  1 1245441 4799


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCC-cccChhhHHHHHhcC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT-VGLDFEGMIADIKAA  177 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~-~~~d~~~l~~~i~~~  177 (410)
                      ++|++.+.++.+.+....+|+..+.+|.+...... ..|.            .+..+|..+... ..-+++.+++.+.++
T Consensus       109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~  188 (412)
T TIGR02407       109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS  188 (412)
T ss_pred             hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence            99999998888777655789988888866643222 1111            112222211000 002366677777643


Q ss_pred             C---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283          178 P---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY  253 (410)
Q Consensus       178 ~---~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  253 (410)
                      .   +...++++...+++.|. +++.+.+++|.++|++||+++|+||++.+|+-.   ...+.... ....++++   ++
T Consensus       189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt---G~~~a~~~-~~v~PDi~---~~  261 (412)
T TIGR02407       189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRT---GTFFSFEP-AGIEPDIV---CL  261 (412)
T ss_pred             cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---chhHHhcc-cCCCCCEE---Ee
Confidence            2   24566676777899998 567777999999999999999999999887632   12222211 12223433   68


Q ss_pred             cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHH-HHHHH-HhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGA-RIVAN-VVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~a~~-~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      ||.++..|+|+|++++   ++++ +.+.   ......++. ++...+. .++.. ++.++++    .++.++..+++++.
T Consensus       262 ~K~lg~~G~pigav~~---~~~~-~~~~---~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l----~~~~~~~g~~l~~~  330 (412)
T TIGR02407       262 SKSISGYGLPLALTLI---KPEL-DVWK---PGEHNGTFRGNNLAFVTATAALEYYWSDDAF----EKAVQRKSEIIQER  330 (412)
T ss_pred             chhccCCccceeEEEE---chhh-hccC---CCccCCCCCccHHHHHHHHHHHHHHhcccHH----HHHHHHHHHHHHHH
Confidence            8999843999999855   5553 3221   111122232 2322222 22233 3444433    23334444444444


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCCC-H----HHHHHhhhcCcEEEcCCC------eEEecC-CCcccHHHH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-K----AQSDNMTNKWHVYMTKDG------RISLAG-LSLAKCEYL  398 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~----~~~~~ll~~~gi~v~~~g------Ris~~~-~~~~~i~~~  398 (410)
                      .+.+.+.+. .      +....+..|++.|+.+. .    .+...+++ +||.+.+.+      ||+.+. +++++++++
T Consensus       331 l~~l~~~~~-~------~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~-~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~  402 (412)
T TIGR02407       331 LDRIVAEYP-E------LIKQVRGRGLMQGIECGDGDLAGKIAKAAFE-NGLIIETSGPNDEVIKLLPPLTIDEETLQQG  402 (412)
T ss_pred             HHHHHhhCC-C------ceEeeecceeEEEEEecChHHHHHHHHHHHH-CCCEEeccCCCCCEEEEECCCCCCHHHHHHH
Confidence            333333221 1      12234556788887662 1    23445554 699997643      777553 599999999


Q ss_pred             HHHHHHHhhh
Q 015283          399 ADAIIDSYHN  408 (410)
Q Consensus       399 ~~~l~~~l~~  408 (410)
                      +++|++++++
T Consensus       403 ~~~l~~~l~~  412 (412)
T TIGR02407       403 LDILEQAVEE  412 (412)
T ss_pred             HHHHHHHHhC
Confidence            9999999864

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.80  E-value=3.8e-17  Score=155.76  Aligned_cols=336  Identities=11%  Similarity=0.010  Sum_probs=195.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|..-+..|+.  .|.+.+++.+++.... +.+.  ....+....+++.+....+    .+.+.+  +++|++
T Consensus        36 ~~~lD~~sg~~~~~lGh~--~p~v~~a~~~q~~~~~-~~~~--~~~~~~~~~la~~l~~~~~----~~~v~f--~~SGse  104 (395)
T PRK03715         36 KRYLDFIQGWAVNCLGHC--NPGMVEALAAQAEKLI-NPSP--AFYNEPMAKLAGLLTQHSC----FDKVFF--ANSGAE  104 (395)
T ss_pred             CEEEECCcChhhccCCCC--CHHHHHHHHHHHHhcc-cccc--cccCHHHHHHHHHHhhccC----CCEEEE--eCCcHH
Confidence            578999887543456665  4888888888775422 1111  1234667777887654321    367888  999999


Q ss_pred             HHHHHHHHHHHhC----CC-CEEEEcCCCCcchh-hhhhhCCCCc---cceeeecC--CCcccChhhHHHHHhcCCCCcE
Q 015283          114 SLRLAAALIERYF----PG-AKVLISSPTWGNHK-NIFNDARVPW---SEYRYYDP--KTVGLDFEGMIADIKAAPGGSF  182 (410)
Q Consensus       114 a~~~~~~~~~~~~----~g-d~Vl~~~p~y~~~~-~~~~~~g~~~---~~v~~~~~--~~~~~d~~~l~~~i~~~~~~~~  182 (410)
                      |++.+.++.+.+.    +| .+|+..+.+|.+.. ..+...|...   ...|....  ...-.|++.+++.+.+   ++.
T Consensus       105 A~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~a  181 (395)
T PRK03715        105 ANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD---KTV  181 (395)
T ss_pred             HHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC---Cce
Confidence            9999988776542    23 57888887776543 2333333211   11111000  0001377888888764   566


Q ss_pred             EEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC
Q 015283          183 ILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA  261 (410)
Q Consensus       183 ~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  261 (410)
                      ++++...++..|... +.+.+++|.++|++||+++|+||++.+++-.   ...+....+ +..+++   .+++|.++ .|
T Consensus       182 avi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRt---G~~~a~~~~-gv~PDi---~t~gK~lg-~G  253 (395)
T PRK03715        182 AVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRT---GTLFAYELS-GIEPDI---MTLGKGIG-GG  253 (395)
T ss_pred             EEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC---cchhhHhhc-CCCCce---eeehhhhh-CC
Confidence            677666677777765 5677999999999999999999999987532   223322222 222333   47899998 57


Q ss_pred             CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283          262 ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK  341 (410)
Q Consensus       262 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  341 (410)
                      +.+|.+.+   ++++.    ........+++. .+.++..++...|+--      +  -+...++++++.+++.+.|+ +
T Consensus       254 ~p~~av~~---~~~i~----~~~~~~~~~T~~-g~pl~~aaala~L~~l------~--~~~l~~~~~~~g~~l~~~L~-~  316 (395)
T PRK03715        254 VPLAALLA---KAEVA----VFEAGDQGGTYN-GNPLMTAVGVAVISQL------L--APGFLEGVRARGEYLKEKLL-E  316 (395)
T ss_pred             cceEEEEE---ccccc----cccCCCcCCCCC-CCHHHHHHHHHHHHHH------H--hccHHHHHHHHHHHHHHHHH-H
Confidence            88898744   56642    111122223333 2333334333322210      0  02445666667777777666 5


Q ss_pred             cCCCCCcccccCCcceeeecCC--C-HHHHHHhhhc---CcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          342 DKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNK---WHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       342 ~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~---~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.....+...... |.+.-+.+  + ...+.+.+.+   .||++.+.+    ||+.+. .|++++++++++|+++++++
T Consensus       317 l~~~~~i~~vrG~-Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        317 LSEERGLEGERGE-GLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             HhhcCCcCeEEcc-eeEEEEEecCchHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            4211112222233 43322222  1 1222222223   399986543    887653 59999999999999998764

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.80  E-value=1.2e-17  Score=153.81  Aligned_cols=336  Identities=17%  Similarity=0.149  Sum_probs=204.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...||+..|.--...|+.  +|.|.+++.+++..+.  .|. |...--++.|.+.+.+..       .+.|-+  +++||
T Consensus        53 n~YIDy~~~~Gp~ilGH~--~p~V~~Av~~~l~~G~--~fg~Pte~Ei~~Aell~~~~p~-------~e~vrf--vnSGT  119 (432)
T COG0001          53 NEYIDYVLGWGPLILGHA--HPAVVEAVQEQLERGL--SFGAPTELEVELAELLIERVPS-------IEKVRF--VNSGT  119 (432)
T ss_pred             CEeeehhccCcccccCCC--CHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHhcCc-------ccEEEE--ecchh
Confidence            356777766543345554  5889999999987753  343 332223444444444321       378888  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCC--CC------ccceeeecCCC----cccChhhHHHHHhcCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR--VP------WSEYRYYDPKT----VGLDFEGMIADIKAAPG  179 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g--~~------~~~v~~~~~~~----~~~d~~~l~~~i~~~~~  179 (410)
                      +|...+.++.+.+..-|+|+..+.||.++.+.+. ..|  .-      ...+|.....+    .--|++.+++.+++.++
T Consensus       120 EAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~  199 (432)
T COG0001         120 EATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGD  199 (432)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCC
Confidence            9999999999988888999999999988766544 222  11      11111100000    01289999999998766


Q ss_pred             CcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          180 GSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      ....|++.....--|.++|.++ +++|.++|+++|+++|.||+..+|...- .    +...+..-.++.   .+++|.+|
T Consensus       200 ~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~-g----Gaq~~~gi~PDl---ttlGKiIG  271 (432)
T COG0001         200 DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL-G----GAQGYYGVEPDL---TTLGKIIG  271 (432)
T ss_pred             cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC-c----ccccccCcCcch---hhhhhhhc
Confidence            6666665555555677676666 9999999999999999999988887541 1    111111111233   37899998


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                       .|+.+|..   .+..++.+.+...-.-++..+++ +|.+.++..+ ...|...+          ...+++.+..++|.+
T Consensus       272 -GGlP~ga~---gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~----------~~y~~l~~~~~~L~~  337 (432)
T COG0001         272 -GGLPIGAF---GGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE----------GVYERLDALGERLAE  337 (432)
T ss_pred             -CCcceeee---ccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc----------cHHHHHHHHHHHHHH
Confidence             89999995   44788655544333233333443 4444333333 33333210          123344444444444


Q ss_pred             Hhhh---ccCCCCCcccccCCccee-ee-cCC-----------C----HHHHHHhhhcCcEEEcCCC----eEEecCCCc
Q 015283          337 SLSA---KDKSGKDWSFILRQIGMF-SF-TGL-----------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSL  392 (410)
Q Consensus       337 ~l~~---~~g~~~~~~~~~~~~~~~-~~-~~~-----------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~  392 (410)
                      .|++   +.+++  +. ....+++| ++ ...           +    ..++..+++ .||++.|+.    -+|.+. ++
T Consensus       338 gl~~~~~~~g~~--~~-v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~-~GV~l~ps~~ea~flS~ah-te  412 (432)
T COG0001         338 GLRAAAERHGIP--LT-VNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLN-RGVYLAPSQFEAGFLSTAH-TE  412 (432)
T ss_pred             HHHHHHHHhCCC--eE-EeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHh-CCcccCCccccceeeeccc-CH
Confidence            4430   44532  22 22344444 22 221           1    123556666 599999985    456655 99


Q ss_pred             ccHHHHHHHHHHHhhhc
Q 015283          393 AKCEYLADAIIDSYHNV  409 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~~  409 (410)
                      ++|++.++++.+++..+
T Consensus       413 ~di~~~~~a~~~~~~~~  429 (432)
T COG0001         413 EDIDRTLEAADEAFKEL  429 (432)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999988764

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.79  E-value=2.5e-17  Score=158.22  Aligned_cols=159  Identities=18%  Similarity=0.106  Sum_probs=121.7

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~  150 (410)
                      +.....+|++.+++++..        +..++  +++|+.++..+  +...+.+||+|+++.+.|++..    ..++..|.
T Consensus        55 ~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~  122 (418)
T TIGR01326        55 MNPTTDVLEQRIAALEGG--------VAALA--VASGQAAITYA--ILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGI  122 (418)
T ss_pred             CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCc
Confidence            445568999999999632        23455  79999999887  4445789999999999987543    34567888


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      +++.++.       .|++.+++.+.+   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|.....   
T Consensus       123 ~v~~v~~-------~d~~~l~~~l~~---~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~---  186 (418)
T TIGR01326       123 EVRFVDP-------DDPEEFEKAIDE---NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL---  186 (418)
T ss_pred             EEEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc---
Confidence            8888764       178899888865   6777778999999999765   67888889999999999999863321   


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                       ..     .+  ..+.++++.|+||.++.+|+|+||+++
T Consensus       187 -~~-----~l--~~g~Divv~S~sK~l~g~G~~lGg~v~  217 (418)
T TIGR01326       187 -CR-----PI--DHGADIVVHSATKYIGGHGTAIGGVIV  217 (418)
T ss_pred             -CC-----ch--hcCCeEEEECccccccCCccceEEEEE
Confidence             11     11  124689999999999999999999854

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.79  E-value=1.7e-17  Score=157.30  Aligned_cols=165  Identities=16%  Similarity=0.144  Sum_probs=119.8

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCccc
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSE  154 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~  154 (410)
                      ..++++.+++++..        ++.++  +++|+.++.++   +..+.+||+|+++.+.|.++...    +...|.+++.
T Consensus        49 ~~~le~~la~l~g~--------~~~l~--~~sG~~al~~~---l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~  115 (378)
T TIGR01329        49 RTALESLLAKLDKA--------DRAFA--FSSGMAALDVI---TRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVH  115 (378)
T ss_pred             HHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEE
Confidence            56888888887532        34444  57788888765   33578999999999999877553    4567888888


Q ss_pred             eeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283          155 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA  234 (410)
Q Consensus       155 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~  234 (410)
                      ++.       .|++.+++.+++   +++++++++|+||||.+.   ++++|+++|+++|+++|+|++|......    . 
T Consensus       116 vd~-------~d~~~le~~i~~---~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~~~----~-  177 (378)
T TIGR01329       116 VDT-------TDLDKVKAALGP---KTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPLLC----N-  177 (378)
T ss_pred             eCC-------CCHHHHHHhcCc---CceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCcccccC----C-
Confidence            876       278899988874   788888899999999966   4778888899999999999997433211    1 


Q ss_pred             hHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHH
Q 015283          235 SSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       235 ~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                       ++    .. ..+++++|.+|.++- .+.+.|++  +++++++.+++..
T Consensus       178 -~l----~~-g~Di~v~S~tK~l~G~~~~~~G~v--~~~~~~~~~~~~~  218 (378)
T TIGR01329       178 -PL----EL-GADIVYHSATKFLAGHSDVMAGVL--AVKGEEIAKKVYF  218 (378)
T ss_pred             -hh----hc-CCcEEEEecceeccCCccceeEEE--EeCcHHHHHHHHH
Confidence             11    11 346899999998853 34678887  4555565455543

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PLN02509 cystathionine beta-lyase

Probab=99.79  E-value=4.7e-17  Score=156.41  Aligned_cols=221  Identities=15%  Similarity=0.135  Sum_probs=139.2

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FN  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~  146 (410)
                      ..|... |.+ .++++.+++....+    .++.++  +++|++++.++   +..+.+||+|+++.|.|+.+...    +.
T Consensus       125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i---l~ll~~GD~VI~~~~~y~~t~~ll~~~l~  193 (464)
T PLN02509        125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVP  193 (464)
T ss_pred             CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH---HHHhCCCCEEEEcCCchhhHHHHHHHHHH
Confidence            456543 443 35555555443332    344444  58888887654   34578999999999999988643    44


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.+++.++.       .|++++++.+.+   +++++++++|+||||.   ..++++|+++|+++|+++|+|++|....
T Consensus       194 ~~G~~v~~vd~-------~d~e~l~~ai~~---~TklV~lesPsNPtG~---i~Dl~~I~~lAk~~g~~lIVD~A~a~~~  260 (464)
T PLN02509        194 RSGVVVKRVNT-------TNLDEVAAAIGP---QTKLVWLESPTNPRQQ---ISDIRKIAEMAHAQGALVLVDNSIMSPV  260 (464)
T ss_pred             HCCeEEEEeCC-------CCHHHHHHhCCc---CCeEEEEECCCCCCCC---HHHHHHHHHHHHHcCCEEEEECCccccc
Confidence            67888777754       367888888864   6788888999999999   6889999999999999999999975433


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                      ..    .  .+     ....+++++|++|.++.+|- -.|.+  .++++.+.+++.. ++..   .....+.....++..
T Consensus       261 ~~----~--pl-----~~gaDivv~S~tK~l~G~gdv~gG~v--~~~~~~l~~~~~~-~~~~---~g~~l~p~~A~l~lr  323 (464)
T PLN02509        261 LS----R--PL-----ELGADIVMHSATKFIAGHSDVMAGVL--AVKGEKLAKEVYF-LQNS---EGSGLAPFDCWLCLR  323 (464)
T ss_pred             cC----C--hh-----hcCCcEEEecCcccccCCCccceeEE--EeccHHHHHHHHH-HHHh---cCCCcCHHHHHHHHh
Confidence            21    1  11     12356889999999875443 23554  3345544444332 2211   111223322222233


Q ss_pred             HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .|+          .+....++..++...+.+.|+ +.+
T Consensus       324 ~L~----------tL~~R~~r~~~nA~~la~~L~-~~p  350 (464)
T PLN02509        324 GIK----------TMALRIEKQQENARKIAMYLS-SHP  350 (464)
T ss_pred             hhh----------hHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            222          234555666667777777777 654

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.79  E-value=1e-16  Score=154.55  Aligned_cols=345  Identities=12%  Similarity=0.082  Sum_probs=190.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCcc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.. .+.+. +.......++.+.+++.+....+.   .+.+.+ .+++|
T Consensus        39 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~---~~~~~f-~~~sG  112 (425)
T PRK09264         39 KEYIDFFAGAGALNYGHN--NPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGL---DYKVQF-TGPTG  112 (425)
T ss_pred             CEeeecccchhhccCCCC--CHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCC---CceEEE-eCCCH
Confidence            568898887543344554  58999999887753 22111 111222234555555543111110   124544 04799


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhC---------CC---CccceeeecCCC-cccChhhHHHHHhcC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDA---------RV---PWSEYRYYDPKT-VGLDFEGMIADIKAA  177 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~---------g~---~~~~v~~~~~~~-~~~d~~~l~~~i~~~  177 (410)
                      ++|++.+.++.+.+....+|+....+|.+.... +...         +.   .+..+|..+... ..-|++.+++.+.+.
T Consensus       113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~  192 (425)
T PRK09264        113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS  192 (425)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence            999999998887776557888888877665432 1111         11   122233211000 012667788888643


Q ss_pred             C---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283          178 P---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY  253 (410)
Q Consensus       178 ~---~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  253 (410)
                      +   +...++++...+...|. +++.+.+++|.++|++||+++|+||++.+|+..   ...+....+ +..++++   ++
T Consensus       193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Grt---G~~~~~~~~-~v~PDi~---t~  265 (425)
T PRK09264        193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRT---GTFFSFERA-GITPDIV---TL  265 (425)
T ss_pred             cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccc---cHHHHHhhc-CCCCCEE---Ee
Confidence            2   24556665656666776 457788999999999999999999999887632   222222221 2223433   77


Q ss_pred             cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015283          254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK  333 (410)
Q Consensus       254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (410)
                      ||.++..|+++|++++   ++++ ..+.   ......++. ...++..++...+.+  +   |.+  ....++++++.++
T Consensus       266 ~K~l~~~G~pigav~~---~~~i-~~~~---~~~~~~T~~-gnp~~~aaa~a~l~~--~---~~~--~~l~~~~~~~g~~  330 (425)
T PRK09264        266 SKSISGYGLPMALVLI---KPEL-DVWK---PGEHNGTFR-GNNLAFVTATAALEE--Y---WSD--DAFEKEVKAKGEL  330 (425)
T ss_pred             ccccCCCccceEEEEE---chhh-hccC---CCccCCCCC-CCHHHHHHHHHHHHH--H---Hhh--hHHHHHHHHHHHH
Confidence            9999966999999855   5553 2211   111122232 222333333223211  0   010  1334445555555


Q ss_pred             HHHHhhhccCCCCC-cccccCCcceeeecCCC-H----HHHHHhhhcCcEEEcCCC----eEEec---CCCcccHHHHHH
Q 015283          334 LFDSLSAKDKSGKD-WSFILRQIGMFSFTGLN-K----AQSDNMTNKWHVYMTKDG----RISLA---GLSLAKCEYLAD  400 (410)
Q Consensus       334 l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~-~----~~~~~ll~~~gi~v~~~g----Ris~~---~~~~~~i~~~~~  400 (410)
                      +.+.|+ ++....+ +....+..|.+.++.+. .    .+...+++ .||.+.+.+    ||.+.   ..++++++++++
T Consensus       331 l~~~l~-~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~  408 (425)
T PRK09264        331 VRERLE-EIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFE-NGLIIETSGPEDEVVKLLPPLTIDEEELEEGLD  408 (425)
T ss_pred             HHHHHH-HHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHH-CCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHH
Confidence            555544 3310000 11122345666666552 2    23445554 699997753    44433   248999999999


Q ss_pred             HHHHHhhh
Q 015283          401 AIIDSYHN  408 (410)
Q Consensus       401 ~l~~~l~~  408 (410)
                      +|++++++
T Consensus       409 ~l~~~l~~  416 (425)
T PRK09264        409 ILEEAVAE  416 (425)
T ss_pred             HHHHHHHH
Confidence            99999865

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.79  E-value=4.4e-17  Score=154.29  Aligned_cols=215  Identities=15%  Similarity=0.129  Sum_probs=140.3

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~  150 (410)
                      +.....+|++.++++...       +..++   +++|+.++..+   +..+.+||+|+++.|+|++...    .+...|+
T Consensus        48 ~~p~~~~Le~~lA~l~g~-------~~~~~---~~sG~aai~~~---~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~  114 (377)
T PRK07671         48 GNPTRAALEELIAVLEGG-------HAGFA---FGSGMAAITAV---MMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGI  114 (377)
T ss_pred             CChHHHHHHHHHHHHhCC-------CceEE---eCCHHHHHHHH---HHHhCCCCEEEECCCccchHHHHHHHHHhcCCe
Confidence            344577999999999533       23344   57778777654   3457799999999999984432    3445788


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      +++.++.       .|++.+++.+++   +++++++++|+||||.+   .++++|.++|+++|+++|+|++|......  
T Consensus       115 ~v~~v~~-------~d~~~l~~ai~~---~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~--  179 (377)
T PRK07671        115 EHTFVDT-------SNLEEVEEAIRP---NTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ--  179 (377)
T ss_pred             EEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC--
Confidence            8877764       378999998875   67888889999999985   46777888899999999999998754321  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                        .  .+     ....++++.|+||.++.++- -.|++  +++++++++++..... .   ............+..-++.
T Consensus       180 --~--p~-----~~g~Divv~S~sK~l~G~~~~~~G~~--v~~~~~l~~~~~~~~~-~---~g~~~~~~~a~l~~~~l~t  244 (377)
T PRK07671        180 --S--PI-----SLGADIVLHSATKYLGGHSDVVAGLV--VVNSPELAEDLHFVQN-S---TGGILGPQDSWLLLRGLKT  244 (377)
T ss_pred             --C--hh-----hhCCeEEEecCcccccCCccceeEEE--EeCcHHHHHHHHHHHH-h---hcCCCCHHHHHHHHcCcCh
Confidence              1  11     11346999999999974442 23554  4556676666553222 1   1122233322223222222


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                                +....++..++...+.+.|+ +.+
T Consensus       245 ----------l~~R~~~~~~na~~la~~L~-~~~  267 (377)
T PRK07671        245 ----------LGIRMEEHETNSRAIAEFLN-NHP  267 (377)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence                      23455556677777788777 553

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.79  E-value=6.3e-17  Score=155.76  Aligned_cols=209  Identities=15%  Similarity=0.004  Sum_probs=137.8

Q ss_pred             eeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHH
Q 015283           38 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL  117 (410)
Q Consensus        38 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~  117 (410)
                      .|+.|.+.-....+.+++.-.+++.+.+.... ..+.+  -..++++++++++..        +++++  +++||+++.+
T Consensus        27 ~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~-~~~G~--~~~~fe~~lA~~~g~--------~~~v~--~~sGt~al~~   93 (438)
T PRK15407         27 PFVPGKSPIPPSGKVIDAKELQNLVDASLDFW-LTTGR--FNDAFEKKLAEFLGV--------RYALL--VNSGSSANLL   93 (438)
T ss_pred             cccCCCCCCCcCccCCCHHHHHHHHHHHHhCc-ccCCh--hHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHH
Confidence            36777662222223334443444444443322 22222  257899999999633        35767  8999999988


Q ss_pred             HHHHHH-------HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          118 AAALIE-------RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       118 ~~~~~~-------~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      +...+.       .+.+||+|+++.++|..+...+...|++++.+++. .+++.+|++.+++.+.+   ++++++++   
T Consensus        94 aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd-~~~~~id~~~le~~i~~---~tkaVi~~---  166 (438)
T PRK15407         94 AFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE-LPTYNIDASLLEAAVSP---KTKAIMIA---  166 (438)
T ss_pred             HHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHcCc---CCeEEEEe---
Confidence            744332       34699999999999999999999999999888873 35688999999998865   66666643   


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMN  268 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~  268 (410)
                      |++|.   +.++++|.++|+++|++||+|++++....-  ...     .....+  ++.+.||  +|.+. .|. .|++ 
T Consensus       167 ~~~G~---p~dl~~I~~la~~~gi~vIeDaa~a~G~~~--~g~-----~~G~~g--d~~~fSf~~~k~~~-~ge-GG~l-  231 (438)
T PRK15407        167 HTLGN---PFDLAAVKAFCDKHNLWLIEDNCDALGSTY--DGR-----MTGTFG--DIATLSFYPAHHIT-MGE-GGAV-  231 (438)
T ss_pred             CCCCC---hhhHHHHHHHHHHCCCEEEEECccchhhhc--CCe-----eeeccC--ceEEEeCCCCCCcc-ccC-ceEE-
Confidence            35666   567889999999999999999996543321  100     111122  3445566  56664 454 3776 


Q ss_pred             EEeCCchhHHHHHH
Q 015283          269 VVCSSSDLAARVKS  282 (410)
Q Consensus       269 ~~~~~~~~~~~~~~  282 (410)
                       ++.++++.+++..
T Consensus       232 -~t~d~~l~~~~~~  244 (438)
T PRK15407        232 -FTNDPLLKKIIES  244 (438)
T ss_pred             -EECCHHHHHHHHH
Confidence             6777776665544

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.78  E-value=5.6e-17  Score=156.84  Aligned_cols=337  Identities=16%  Similarity=0.112  Sum_probs=193.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|......|+.  +|.+.+++.+++.......+ +.....++.+.+++.+..       .+.+.+  +++|++
T Consensus        99 ~~yiD~~~g~g~~~lGh~--~p~v~~av~~ql~~~~~~~~-~~~~~~~lAe~l~~~~p~-------~~~v~f--~~SGsE  166 (474)
T PLN02482         99 NEYIDYVGSWGPAIIGHA--DDEVLAALAETMKKGTSFGA-PCLLENVLAEMVIDAVPS-------VEMVRF--VNSGTE  166 (474)
T ss_pred             CEEEEecccccccccCCC--CHHHHHHHHHHHhhCCCCCC-CCHHHHHHHHHHHHhCCC-------CCEEEE--eCChHH
Confidence            457888776543345554  58999999888865431222 222223444445444311       368999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hC--CCC------ccceeeecC-----CCcccChhhHHHHHhcCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA--RVP------WSEYRYYDP-----KTVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~--g~~------~~~v~~~~~-----~~~~~d~~~l~~~i~~~~~  179 (410)
                      |.+.+.++.+.+...++|+..+.+|.++...+. ..  +..      ...++....     -.+ .|++.+++.+.++++
T Consensus       167 A~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~  245 (474)
T PLN02482        167 ACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKG  245 (474)
T ss_pred             HHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCC
Confidence            999999988887666889988888877643211 10  000      000110000     001 278888888876555


Q ss_pred             CcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          180 GSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      ...++++.....-.|.+.+ .+-++++.++|++||+++|+||++.+|..+    ..+.. ...+..+++   .+++|.+|
T Consensus       246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g----~~ga~-~~~gv~PDi---~t~gK~lg  317 (474)
T PLN02482        246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIA----YGGAQ-EYFGITPDL---TTLGKVIG  317 (474)
T ss_pred             ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecC----cchHh-HHhCCCCCE---EEecchhh
Confidence            5666676666666787665 556999999999999999999998777432    11121 112222343   37899998


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                       .|+.+|.+.+   ++++.+.+...-......+++ +|...+...+ ...+.++           ...++++++.+++.+
T Consensus       318 -gG~Pigav~g---~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~-----------~~~~~~~~~g~~l~~  382 (474)
T PLN02482        318 -GGLPVGAYGG---RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQP-----------GTYEYLDKITKKLIQ  382 (474)
T ss_pred             -CCCceEEEEE---cHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhcc-----------CHHHHHHHHHHHHHH
Confidence             7899999744   777555543210111222332 3333322222 3333332           234455555555666


Q ss_pred             HhhhccCCCCCcccc-cCCccee-eec--C-C---------CH----HHHHHhhhcCcEEEcCCC----eEEecCCCccc
Q 015283          337 SLSAKDKSGKDWSFI-LRQIGMF-SFT--G-L---------NK----AQSDNMTNKWHVYMTKDG----RISLAGLSLAK  394 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~-~~~~~~~-~~~--~-~---------~~----~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~  394 (410)
                      .|. ++..+..+... ....+++ +++  + .         +.    .+...+++ +||++.|.+    .+++. +|++|
T Consensus       383 ~L~-~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~~~~~~~psl~-ht~~d  459 (474)
T PLN02482        383 GIL-EAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPSQFEAGFTSLA-HTEED  459 (474)
T ss_pred             HHH-HHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEeccCCCCCcCCCC-CCHHH
Confidence            555 44311101111 1223333 111  0 0         11    23455555 699998864    24444 49999


Q ss_pred             HHHHHHHHHHHhhhc
Q 015283          395 CEYLADAIIDSYHNV  409 (410)
Q Consensus       395 i~~~~~~l~~~l~~~  409 (410)
                      |+++++++.+++.++
T Consensus       460 Id~~l~al~~~l~~~  474 (474)
T PLN02482        460 IDFTIAAAERVLARI  474 (474)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999998753

>TIGR01814 kynureninase kynureninase

Probab=99.78  E-value=3.1e-17  Score=157.85  Aligned_cols=276  Identities=16%  Similarity=0.085  Sum_probs=163.9

Q ss_pred             cCCceEEEecCChhhHHHHHHHHHHHhCCC---CEEEEcCCCCcchhh----hhhhCCCCc----cceeeecCCCcccCh
Q 015283           99 KEQRVATVQGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNHKN----IFNDARVPW----SEYRYYDPKTVGLDF  167 (410)
Q Consensus        99 ~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g---d~Vl~~~p~y~~~~~----~~~~~g~~~----~~v~~~~~~~~~~d~  167 (410)
                      ++++|++  ++|+|++++.++..+  +.+|   +.|++....|+....    .++..|.++    +.++.  .+.+.+|+
T Consensus        85 ~~~~v~~--~~~~t~~l~~~~~~~--~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~  158 (406)
T TIGR01814        85 KEDEVVV--MNTLTINLHLLLASF--YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRL  158 (406)
T ss_pred             CCCcEEE--eCCchHHHHHHHHHh--cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCH
Confidence            3789999  999999999974322  4554   367888889987433    345678876    23333  34456788


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +.+++.+....++++++++++++|.||...+   +++|.++|+++|+++++|++++ ++..+.+         ....+.+
T Consensus       159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~-~G~~~id---------~~~~gvD  225 (406)
T TIGR01814       159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHA-VGNVPLD---------LHDWGVD  225 (406)
T ss_pred             HHHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccc-cCCcccc---------cccCCCC
Confidence            9998888643357888888999999999665   6677778999999999999944 4422111         1123467


Q ss_pred             EEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHHh---h---------------ccC-cccCCChhHHHHHHHHh
Q 015283          248 LVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKR---L---------------ARP-MYSNPPVHGARIVANVV  307 (410)
Q Consensus       248 i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~~---~---------------~~~-~~~~~~~~~~~~a~~~l  307 (410)
                      +++.|..|.+ |.||   |.+++ . . +..+.+......   .               ... ..++++..+..++...|
T Consensus       226 ~~~~s~hK~l~g~pG---~~l~v-~-~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al  299 (406)
T TIGR01814       226 FACWCTYKYLNAGPG---AGAFV-H-E-KHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSL  299 (406)
T ss_pred             EEEEcCccccCCCCC---eEEEE-e-h-hhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHH
Confidence            8899999987 3455   33322 2 2 212222111000   0               000 01123332322222222


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccC-----Ccceeee-cCCCHHH-HHHhhhcCcEEE
Q 015283          308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILR-----QIGMFSF-TGLNKAQ-SDNMTNKWHVYM  379 (410)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~-----~~~~~~~-~~~~~~~-~~~ll~~~gi~v  379 (410)
                      +--   .  ...+++.+++.++..+++.+.|. +. +....+.+..+     .+++..+ .+.+.+. ...| .++||.+
T Consensus       300 ~~~---~--~~g~~~i~~~~~~l~~~l~~~l~-~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L-~~~gi~v  372 (406)
T TIGR01814       300 DIF---D--QAGMEALRKKSLLLTDYLEELIK-ARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQAL-IKRGVIG  372 (406)
T ss_pred             HHH---H--hcCHHHHHHHHHHHHHHHHHHHH-hhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHH-HHCCEEE
Confidence            210   0  11246777888888888888887 54 20001222222     1223322 2233444 4455 4569988


Q ss_pred             cCC--C--eEEec--CCCcccHHHHHHHHHHHh
Q 015283          380 TKD--G--RISLA--GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       380 ~~~--g--Ris~~--~~~~~~i~~~~~~l~~~l  406 (410)
                      ...  +  |+|++  ..|++|++++++.|++++
T Consensus       373 ~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       373 DKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             eccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence            643  2  99973  348999999999999875

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.78  E-value=6.8e-17  Score=154.93  Aligned_cols=159  Identities=16%  Similarity=0.092  Sum_probs=117.1

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh----CCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----ARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~----~g~  150 (410)
                      +.....+|++.++++...        +..++  +++|++|+.++  +...+.+||+|+++.+.|++....+..    .|.
T Consensus        56 ~~pt~~~Le~~lA~l~g~--------~~~l~--~ssG~~Ai~~a--l~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi  123 (425)
T PRK06084         56 MNPTNDVLEQRVAALEGG--------VGALA--VASGMAAITYA--IQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGI  123 (425)
T ss_pred             CCchHHHHHHHHHHHhCC--------CceeE--ehhHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHhccccee
Confidence            344567999999999532        23344  68999999988  444578999999999999865544432    344


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++.       .|++.+++.+++   +++++++++|+||||.+++   +++|+++|+++|+++|+|++|......  
T Consensus       124 ~v~~~d~-------~d~e~le~ai~~---~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~--  188 (425)
T PRK06084        124 ETRFAAH-------DDIAALEALIDE---RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC--  188 (425)
T ss_pred             EEEEECC-------CCHHHHHHHhcc---CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence            4444432       378999998875   5777788999999999776   577888899999999999998643321  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                        .  ++     ....++++.|++|.++.+|.++|.+++
T Consensus       189 --~--p~-----~~gaDivv~S~tK~l~G~g~~~gG~v~  218 (425)
T PRK06084        189 --R--PF-----EHGADIVVHSLTKYIGGHGTSIGGIVV  218 (425)
T ss_pred             --C--hh-----hcCCCEEEECchhcccccccceeEEEE
Confidence              1  11     123568999999999989999999744

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.78  E-value=1.3e-16  Score=152.01  Aligned_cols=153  Identities=19%  Similarity=0.171  Sum_probs=116.3

Q ss_pred             cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCc
Q 015283           77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPW  152 (410)
Q Consensus        77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~  152 (410)
                      .....|.+.++++....        ..+.  +++|+.|+.++  +.+.+.+||+|+++.++|.+....    +...|+++
T Consensus        61 Ptv~~lE~~la~leg~~--------~av~--~~SG~aAi~~a--l~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v  128 (432)
T PRK06702         61 PTLAAFEQKLAELEGGV--------GAVA--TASGQAAIMLA--VLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV  128 (432)
T ss_pred             cHHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEE
Confidence            45779999999996433        3444  79999999998  455578999999999999876665    56789888


Q ss_pred             cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283          153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN  232 (410)
Q Consensus       153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~  232 (410)
                      ..+..      .+|++.+++++++   ++++|++.+|+|||+.+.+   +++|+++|+++|+++|+|++|.....     
T Consensus       129 ~~vd~------~~d~~~l~~~I~~---~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~-----  191 (432)
T PRK06702        129 TFFNP------NLTADEIVALAND---KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL-----  191 (432)
T ss_pred             EEECC------CCCHHHHHHhCCc---CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh-----
Confidence            77754      2588999999975   6778888899999999766   77888889999999999999742111     


Q ss_pred             chhHhHHHhhcCCcEEEEecccc-----cccccCCCc
Q 015283          233 DASSVRLFATRGMELLVAQSYSK-----NLGLYAERI  264 (410)
Q Consensus       233 ~~~~~~~~~~~~~~~i~~~S~sK-----~~~~~G~r~  264 (410)
                          .+. . ...-+|++.|+||     ..+++|.++
T Consensus       192 ----~~p-l-~~GADIvv~S~TKy~~Ghsd~l~G~v~  222 (432)
T PRK06702        192 ----CQA-F-EHGANIIVHSTTKYIDGHASSLGGIVI  222 (432)
T ss_pred             ----CCh-h-hcCCCEEEEccccccCCCcceeceEEE
Confidence                101 1 2235699999999     556666655

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.78  E-value=5.2e-17  Score=155.89  Aligned_cols=328  Identities=14%  Similarity=0.081  Sum_probs=190.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++.. .+...|.......++.+.+++.....      .+.+.+  +++|+
T Consensus        75 ~~ylD~~~g~~~~~lGh~--hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~SGs  144 (442)
T TIGR03372        75 NEFIDCLGGFGIFNVGHR--NPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGK------LKYSFF--CNSGT  144 (442)
T ss_pred             CEEEECCccHHhhhcCCC--CHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCCch
Confidence            467888777322244554  58888888887754 22233433444456666666653221      256888  89999


Q ss_pred             hHHHHHHHHHHHhC---CCCEEEEcCCCCcchhh-hhhhCCC------------CccceeeecCCCcccChhhHHHHHhc
Q 015283          113 GSLRLAAALIERYF---PGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKTVGLDFEGMIADIKA  176 (410)
Q Consensus       113 ~a~~~~~~~~~~~~---~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~  176 (410)
                      +|++.+.++.+.+.   ...+|+..+.+|.+... .+...+.            .+..+|.       .|.+.+++.+.+
T Consensus       145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~~l~~  217 (442)
T TIGR03372       145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLKALNE  217 (442)
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHHHHHH
Confidence            99999998887764   33678888887766543 2222111            1112221       256777666642


Q ss_pred             ---CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283          177 ---APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS  252 (410)
Q Consensus       177 ---~~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  252 (410)
                         .+....++++...+...|...+ ++-++++.++|++||+++|+||++.+|+-.   ...|....+ +..++++   +
T Consensus       218 ~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt---G~~~a~e~~-gv~PDiv---t  290 (442)
T TIGR03372       218 CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT---GKMFACEHE-GVQPDIL---C  290 (442)
T ss_pred             HhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc---ccchhhhhc-CCCCCee---e
Confidence               2345666666666666777664 555999999999999999999999887632   233343332 2223444   5


Q ss_pred             ccccccccC-CCcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHH
Q 015283          253 YSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       253 ~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      ++|.+| .| +.+|.++.   ++++.+.+..  .. ...+++. .+.++..++   ...++++           ...++.
T Consensus       291 ~gK~lg-~G~~Pigavv~---~~~i~~~~~~--~~~~~~~T~~-gnp~~~Aaa~a~L~~i~~~-----------~l~~~~  352 (442)
T TIGR03372       291 LAKALG-GGVMPIGATIA---TEAVFSVLFD--NPFLHTTTFG-GNPLACAAALATINELLEK-----------NLPAQA  352 (442)
T ss_pred             ehhhhc-CCcccceEEEe---cHHHHHhhhc--cCccccCCCC-CCHHHHHHHHHHHHHHHhc-----------cHHHHH
Confidence            899998 67 68898744   6675555421  11 1122332 233333333   3333332           223445


Q ss_pred             HHHHHHHHHHhhhccCCCCC--cccccCCcceeeecCC--C---HHHHHHhhhcCcEEEcCC---C---eEEecC-CCcc
Q 015283          328 KNVRQKLFDSLSAKDKSGKD--WSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKD---G---RISLAG-LSLA  393 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~--~~~~~~~~~~~~~~~~--~---~~~~~~ll~~~gi~v~~~---g---Ris~~~-~~~~  393 (410)
                      ++..+++.+.|+ ++....+  +... ...|.+.-+.+  +   ..+...+++ +||++.+.   +   ||..+. .|++
T Consensus       353 ~~~G~~l~~~L~-~l~~~~~~~i~~v-RG~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~~~~~lr~~Ppl~~t~~  429 (442)
T TIGR03372       353 AIKGDFLLDGFQ-QLAAEYPDLIIEA-RGKGLLMAIEFRDNEIGYAFAKELFQ-QNILVAGTLNNAKSIRIEPPLTITIE  429 (442)
T ss_pred             HHHHHHHHHHHH-HHHHhCCCceEEE-ecceEEEEEEeCChHHHHHHHHHHHH-CCcEEeecCCCCCEEEEECCcccCHH
Confidence            555555555555 4421110  1112 23344433333  1   223556655 69998653   2   776553 4999


Q ss_pred             cHHHHHHHHHHHh
Q 015283          394 KCEYLADAIIDSY  406 (410)
Q Consensus       394 ~i~~~~~~l~~~l  406 (410)
                      ++++++++|.+++
T Consensus       430 ~id~~~~~l~~~~  442 (442)
T TIGR03372       430 QCALVIKAAKDAL  442 (442)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999998874

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.78  E-value=1.9e-16  Score=149.63  Aligned_cols=166  Identities=14%  Similarity=0.051  Sum_probs=121.7

Q ss_pred             ccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCcc
Q 015283           78 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWS  153 (410)
Q Consensus        78 g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~  153 (410)
                      ....|++.++++...        +++++  ++||++|+..+  +...+.+||+|++++|.|++....    ++..|.++.
T Consensus        51 t~~~lE~~lA~l~g~--------~~~~~--~~sG~~Ai~~a--l~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~  118 (377)
T TIGR01324        51 THFALQDAMCELEGG--------AGCYL--YPSGLAAVTNS--ILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDIT  118 (377)
T ss_pred             cHHHHHHHHHHHhCC--------CcEEE--ECcHHHHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEE
Confidence            346999999998532        45777  89999999998  455578999999999999876543    345676665


Q ss_pred             ceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCc
Q 015283          154 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND  233 (410)
Q Consensus       154 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~  233 (410)
                      .++.   .    +.+.+++.+.+   +++++++++|+||||.   ..++++|+++|+++|+++|+|++|......    .
T Consensus       119 ~~d~---~----~~e~l~~~i~~---~tklV~lesp~Np~g~---~~dl~~I~~la~~~g~~livD~t~a~g~~~----~  181 (377)
T TIGR01324       119 YYDP---L----IGEDIATLIQP---NTKVLFLEAPSSITFE---IQDIPAIAKAARNPGIVIMIDNTWAAGLLF----K  181 (377)
T ss_pred             EECC---C----CHHHHHHhcCC---CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccccc----C
Confidence            5532   1    22677777764   7888889999999988   788999999999999999999998653321    1


Q ss_pred             hhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHH
Q 015283          234 ASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       234 ~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                        ++     ..+.+++++|++|.++-+ +...|+++.   +++.++++..
T Consensus       182 --pl-----~~gaDivv~S~tK~l~G~~d~~gG~v~~---~~~~~~~l~~  221 (377)
T TIGR01324       182 --PL-----EHGVDISIQAGTKYLVGHSDIMIGTVVA---NARTWDQLRE  221 (377)
T ss_pred             --cc-----ccCceEEEecCceeccCCCCceEEEEEe---CHHHHHHHHH
Confidence              11     224578999999999643 455676533   6666665553

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.78  E-value=3.8e-17  Score=154.62  Aligned_cols=280  Identities=17%  Similarity=0.069  Sum_probs=172.9

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCcc
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWS  153 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  153 (410)
                      ......++++.+++++..        +++++  +++|++++..++  ... +.+||+|+++.++|..+...+...|.+++
T Consensus        16 ~~~~~~~~~~~la~~~~~--------~~~~~--~~sgt~al~~~l--~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~   83 (352)
T cd00616          16 LGPKVREFEKAFAEYLGV--------KYAVA--VSSGTAALHLAL--RALGIGPGDEVIVPSFTFVATANAILLLGATPV   83 (352)
T ss_pred             CCHHHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHHH--HHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEE
Confidence            344678999999999632        35666  789999998873  333 46999999999999999989999999999


Q ss_pred             ceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCc
Q 015283          154 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND  233 (410)
Q Consensus       154 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~  233 (410)
                      .++.. .+++.+|++.+++.+++   +++++++   .|++|...   ++++|.++|+++|+++|+|+++...... .. .
T Consensus        84 ~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~~---~~~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~g~~~-~~-~  151 (352)
T cd00616          84 FVDID-PDTYNIDPELIEAAITP---RTKAIIP---VHLYGNPA---DMDAIMAIAKRHGLPVIEDAAQALGATY-KG-R  151 (352)
T ss_pred             EEecC-CCcCCcCHHHHHHhcCc---CCeEEEE---ECCCCCcC---CHHHHHHHHHHcCCeEEEECCCCCCCeE-CC-E
Confidence            99883 34678899999998854   5666664   36899865   4667777899999999999997643211 00 0


Q ss_pred             hhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC--------c---ccCCChhHH
Q 015283          234 ASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP--------M---YSNPPVHGA  300 (410)
Q Consensus       234 ~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~  300 (410)
                           . .+.. .++.+.|++  |.++  +.+.|++  ++.++++.+++..........        .   ....+.+..
T Consensus       152 -----~-~~~~-~d~~~~S~~~~K~~~--~~~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  220 (352)
T cd00616         152 -----K-VGTF-GDAGAFSFHPTKNLT--TGEGGAV--VTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQA  220 (352)
T ss_pred             -----E-cccC-cceeEEcCCCCCCCc--ccCceEE--EECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHH
Confidence                 0 0111 245666766  8874  3345766  455667666654322111100        0   001222221


Q ss_pred             HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC------Ccceeee-c----CCCHHHHH
Q 015283          301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR------QIGMFSF-T----GLNKAQSD  369 (410)
Q Consensus       301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~------~~~~~~~-~----~~~~~~~~  369 (410)
                      .++...          .+.+++..++.+++.+++.+.|. .+..   +++..+      ....+.+ +    +.+.+.+.
T Consensus       221 a~~~~~----------l~~~~~~~~~~~~~~~~~~~~L~-~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  286 (352)
T cd00616         221 AIGLAQ----------LEKLDEIIARRREIAERYKELLA-DLPG---IRLPDVPPGVKHSYHLYVIRLDPEAGESRDELI  286 (352)
T ss_pred             HHHHHH----------HHhhHHHHHHHHHHHHHHHHHhc-CCCC---ccCCCCCCCCceeeEEEEEEECCcCCCCHHHHH
Confidence            111111          12235666777788888888888 6531   232221      1122222 2    23555554


Q ss_pred             HhhhcCcEEEc----CC-------------------------C--eEEecC-CCcccHHHHHHHHH
Q 015283          370 NMTNKWHVYMT----KD-------------------------G--RISLAG-LSLAKCEYLADAII  403 (410)
Q Consensus       370 ~ll~~~gi~v~----~~-------------------------g--Ris~~~-~~~~~i~~~~~~l~  403 (410)
                      +.|++.||.+.    |.                         +  |+++.. +|++|++.+++.|+
T Consensus       287 ~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         287 EALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             HHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence            44555688653    10                         1  555443 58999999998874

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.78  E-value=1.5e-16  Score=153.78  Aligned_cols=339  Identities=14%  Similarity=0.117  Sum_probs=190.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc--cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++......  .+.+.....++.+.+++......     .+.+.+  +++|
T Consensus        42 ~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~~v~f--~~SG  112 (445)
T PRK08593         42 KTYIDLLASASSQNVGHA--PPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDF-----EKRVTF--GLSG  112 (445)
T ss_pred             CEEEECCccHHhhcCCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC-----CCEEEE--CCch
Confidence            467888776442345664  589999988887542111  11223333456666666532210     257889  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhCCC-------------CccceeeecCCC--cc-cC-------h
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV-------------PWSEYRYYDPKT--VG-LD-------F  167 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~g~-------------~~~~v~~~~~~~--~~-~d-------~  167 (410)
                      ++|++.+.++.+.+....+|+..+.+|.+... .+...+.             .+..+|..+...  +. .+       +
T Consensus       113 seA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  192 (445)
T PRK08593        113 SDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYL  192 (445)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHH
Confidence            99999998888776555678888877766532 2211110             122233211100  00 01       2


Q ss_pred             hhHHHHHhcC--CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          168 EGMIADIKAA--PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       168 ~~l~~~i~~~--~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      +.+++.+.+.  ++...++++...++..|.. ++.+.++++.++|++||+++|.||++.+|+..   ...+....+ +..
T Consensus       193 ~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Grt---G~~~a~~~~-gv~  268 (445)
T PRK08593        193 APLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRT---GKWSSISHF-NIT  268 (445)
T ss_pred             HHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---chHHHHHhc-CCC
Confidence            3344444321  2456777767778778887 56777999999999999999999999888632   222222222 222


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh---CChhhHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEME  321 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~  321 (410)
                      ++++   +++|.++ .|+++|+++.   ++++.+.+..    .....+...+.+++.++...|   +++           
T Consensus       269 pDi~---t~gK~l~-~G~p~gav~~---~~~i~~~~~~----~~~~~T~~~~pl~~aaa~a~l~~l~~~-----------  326 (445)
T PRK08593        269 PDLM---SFGKSLA-GGMPMSAIVG---RKEIMESLEA----PAHLFTTGANPVSCAAALATIDMIEDE-----------  326 (445)
T ss_pred             CCEe---eeccccc-CCcccEEEEE---cHHHHhhhcc----CCCCCCCCCCHHHHHHHHHHHHHHHhc-----------
Confidence            3433   7899998 6899999755   7775555421    111112233344444443333   222           


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCC-C---e
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKD-G---R  384 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~-g---R  384 (410)
                      ...++.+++.+++.+.|+ ++....++.......|.+.-+.+         +    ..+..++++ +||++.+. +   |
T Consensus       327 ~l~~~~~~~g~~l~~~L~-~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~~~lr  404 (445)
T PRK08593        327 SLLQRSAEKGEYARKRFD-QWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIAVAGNVLR  404 (445)
T ss_pred             cHHHHHHHHHHHHHHHHH-HHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEeccCCCEEE
Confidence            233444445555555554 33110111111122233221111         1    123445555 69999764 2   7


Q ss_pred             EEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          385 ISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       385 is~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |+.+. .|+++++++++++.+++.++
T Consensus       405 ~~p~l~~t~~~id~~~~~l~~~l~~~  430 (445)
T PRK08593        405 FQPPLVITYEQLDTALNTIEQAFTAL  430 (445)
T ss_pred             EECCCccCHHHHHHHHHHHHHHHHHH
Confidence            76553 49999999999999998653

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.78  E-value=5.1e-17  Score=154.50  Aligned_cols=216  Identities=13%  Similarity=0.050  Sum_probs=141.2

Q ss_pred             ceEEEecCChhh-HHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceee-ecCCCcccChhhHHHHHhcCC
Q 015283          102 RVATVQGLSGTG-SLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRY-YDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       102 ~i~~~~t~ggt~-a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      ..++  +++||+ ++.++...++... +||.|+++.-+|.+....+...|++++.++. .+++++.+|++.+++++++..
T Consensus       125 ~a~~--v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~  202 (444)
T TIGR03531       125 SAFV--VPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIG  202 (444)
T ss_pred             EEEE--ECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhcc
Confidence            4555  688995 6665522221112 5899999999999999999999999999986 356789999999999998533


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH-HHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~S~sK~~  257 (410)
                      ++..++++++|+  |+...+.+++++|+++|++||+++|+|++|......     ...+. .....+.-++++.|++|.+
T Consensus       203 ~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~-----~~~~~~~g~~~Grad~vv~s~hK~l  275 (444)
T TIGR03531       203 PDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK-----YMELINKAIKVGRVDAVVSSTDKNF  275 (444)
T ss_pred             CCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh-----hhhhhhccccccCCCeEEEeCccCC
Confidence            245555555554  555556899999999999999999999998753311     00100 0011112367788999999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      ..||+  |+++ .+.++++.+++.....    .  ...+...+.+...++.-+      .+.+++..++..++++++.+.
T Consensus       276 ~~pg~--Gg~I-~~~d~el~~~i~~~y~----g--~~~~s~~~~~~~~ll~~G------~~g~~~li~~~~~~a~~l~~~  340 (444)
T TIGR03531       276 MVPVG--GAII-YSFDENFIQEISKSYP----G--RASASPSLDVLITLLSLG------SKGYLELLKERKEMYKYLKEL  340 (444)
T ss_pred             CCCCC--EEEE-EECCHHHHHHHHHhcc----C--CCCChHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHH
Confidence            88887  6663 3667776665543211    1  112233455544444322      234456666667777777776


Q ss_pred             hhhcc
Q 015283          338 LSAKD  342 (410)
Q Consensus       338 l~~~~  342 (410)
                      |. ++
T Consensus       341 L~-~l  344 (444)
T TIGR03531       341 LQ-KL  344 (444)
T ss_pred             HH-HH
Confidence            66 54

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.78  E-value=5.1e-17  Score=157.97  Aligned_cols=328  Identities=13%  Similarity=0.107  Sum_probs=188.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC---Ccc------cHH-HHHHHHHHhcCCCCCcccCCce
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP---IEG------LAA-FNKVTAELLFGADNSVLKEQRV  103 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g------~~~-lr~aia~~~~~~~~~~~~~~~i  103 (410)
                      ...|+|..+++      . ++|.+++++...+...+...++.   ..|      +++ .|+.+++++...      ++++
T Consensus        34 ~~~l~l~~sen------~-~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~------~~~~  100 (452)
T PTZ00094         34 IEGLELIASEN------F-TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLD------PEEW  100 (452)
T ss_pred             HcCeeEecccc------c-CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCC------cccc
Confidence            46789987764      2 37889998876653322111211   112      222 455777776443      4555


Q ss_pred             EE-EecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC--------C--CCccceeeecCCCcccChhhHHH
Q 015283          104 AT-VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA--------R--VPWSEYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus       104 ~~-~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~--------g--~~~~~v~~~~~~~~~~d~~~l~~  172 (410)
                      .+ +++++|++++.+++  ...+.+||+|++....++.+...+...        +  .++..+++  ..++.+|++++++
T Consensus       101 ~~~~~~~sgt~an~~v~--~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~--~~~g~id~~~L~~  176 (452)
T PTZ00094        101 GVNVQPYSGSPANFAVY--TALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQV--NEKGLIDYDKLEE  176 (452)
T ss_pred             eeecCCCchHHHHHHHH--HHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeeccc--CCCCCcCHHHHHH
Confidence            44 22378998888873  344779999999888877765443211        1  12223333  2246799999999


Q ss_pred             HHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283          173 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS  252 (410)
Q Consensus       173 ~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  252 (410)
                      .+++.  ++.+++++  ++.+|...+   +++|.++|+++|+++++|+++...... .+....+      ..+.+++++|
T Consensus       177 ~l~~~--~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~-~~~~~~~------~~~~D~l~~S  242 (452)
T PTZ00094        177 LAKAF--RPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVA-AGVLPSP------FPYADVVTTT  242 (452)
T ss_pred             HHHHh--CCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhcccc-CCCCCCC------CCCCcEEEcC
Confidence            99652  23344432  345898555   556666799999999999995432221 1111111      1136788999


Q ss_pred             ccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       253 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      .+|+++  |.+.|++++   +++..+.+.........+.+. ++......++...++.-     .....+++++++.+++
T Consensus       243 ~hK~l~--GP~Gg~l~~---~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~-----~~~~~~~~~~~i~~l~  312 (452)
T PTZ00094        243 THKSLR--GPRSGLIFY---RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEV-----QSPEWKEYAKQVLKNA  312 (452)
T ss_pred             CccCCC--CCCceEEEE---ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHH-----hChhHHHHHHHHHHHH
Confidence            999873  233377643   444444444433322222222 22222222222222211     0123457788899999


Q ss_pred             HHHHHHhhhccCCCCCcccccCCc-ceeeec-----CCCHHHHHHhhhcCcEEEcC------------CC-eEEecCC--
Q 015283          332 QKLFDSLSAKDKSGKDWSFILRQI-GMFSFT-----GLNKAQSDNMTNKWHVYMTK------------DG-RISLAGL--  390 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~ll~~~gi~v~~------------~g-Ris~~~~--  390 (410)
                      +++.+.|+ +.|.    .+..+.. .....+     +.+...+..+|+++||.+..            ++ |+++..+  
T Consensus       313 ~~l~~~L~-~~g~----~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt  387 (452)
T PTZ00094        313 KALAAALE-KRGY----DLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTT  387 (452)
T ss_pred             HHHHHHHH-hCCc----EEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHh
Confidence            99999998 7663    3322111 111121     33566677777878999942            22 8886432  


Q ss_pred             ---CcccHHHHHHHHHHHhh
Q 015283          391 ---SLAKCEYLADAIIDSYH  407 (410)
Q Consensus       391 ---~~~~i~~~~~~l~~~l~  407 (410)
                         +++|++++++.|++++.
T Consensus       388 ~g~~~~di~~l~~~l~~~~~  407 (452)
T PTZ00094        388 RGAKEKDFKFVADFLDRAVK  407 (452)
T ss_pred             CCCCHHHHHHHHHHHHHHHH
Confidence               48999999999999886

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.77  E-value=9.5e-17  Score=155.14  Aligned_cols=339  Identities=14%  Similarity=0.066  Sum_probs=193.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++... +...|.+.....++.+.+++.....      .+.+.+  +++|+
T Consensus        82 ~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SGs  151 (459)
T PRK11522         82 QEFIDCLGGFGIFNVGHR--NPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGK------LKYSFF--CNSGT  151 (459)
T ss_pred             CEEEECCcCHHhhhcCCC--CHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCch
Confidence            456787776332244554  588999988887542 2122333334445666666553221      357888  99999


Q ss_pred             hHHHHHHHHHHHhCC--C-CEEEEcCCCCcchhhh-hhhCCCCcc---ceeeecC--CCcccChhhHHHHHhc---CCCC
Q 015283          113 GSLRLAAALIERYFP--G-AKVLISSPTWGNHKNI-FNDARVPWS---EYRYYDP--KTVGLDFEGMIADIKA---APGG  180 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~--g-d~Vl~~~p~y~~~~~~-~~~~g~~~~---~v~~~~~--~~~~~d~~~l~~~i~~---~~~~  180 (410)
                      +|++.+.++.+.+..  | .+|+....+|.+.... +...+....   ..|..+.  .-.-.|.+.+++.+..   .++.
T Consensus       152 EAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  231 (459)
T PRK11522        152 ESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDD  231 (459)
T ss_pred             HHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCc
Confidence            999999988877653  3 4688888777665432 222221100   0111000  0001266777777753   2234


Q ss_pred             cEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      ..++++...+.-.|...+ ..-++++.++|++||+++|+||++.+|+-.   ...+....+ +..++++   +++|.+| 
T Consensus       232 iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt---G~~~a~e~~-gv~PDiv---t~gK~lg-  303 (459)
T PRK11522        232 VAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT---GKMFACEHE-NVQPDIL---CLAKALG-  303 (459)
T ss_pred             EEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc---chhhhhhcc-CCCCCEE---Eechhhh-
Confidence            566666666666777654 555999999999999999999998877532   233333222 2223433   7899998 


Q ss_pred             cC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          260 YA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       260 ~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      .| +.+|.+++   .+++.+.+... .....+++. .+.++..++   ...+.++           ...++.+++.+++.
T Consensus       304 gG~~Pigav~~---~~~i~~~~~~~-~~~~~~T~~-gnp~~~Aaala~L~~i~~~-----------~l~~~~~~~g~~l~  367 (459)
T PRK11522        304 GGVMPIGATIA---TEEVFSVLFDN-PFLHTTTFG-GNPLACAAALATINVLLEQ-----------NLPAQAEQKGDYLL  367 (459)
T ss_pred             CCCccceeEEE---cHHHHHHhccC-CcccCCCCC-CCHHHHHHHHHHHHHHhcc-----------hHHHHHHHHHHHHH
Confidence            57 68899754   56654443211 001122222 233333333   3333332           34456666667777


Q ss_pred             HHhhhccCCCCC--cccccCCcceeeecCC--C---HHHHHHhhhcCcEEEcCC---C---eEEecC-CCcccHHHHHHH
Q 015283          336 DSLSAKDKSGKD--WSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKD---G---RISLAG-LSLAKCEYLADA  401 (410)
Q Consensus       336 ~~l~~~~g~~~~--~~~~~~~~~~~~~~~~--~---~~~~~~ll~~~gi~v~~~---g---Ris~~~-~~~~~i~~~~~~  401 (410)
                      +.|+ ++....+  +..+. ..|.+.-+.+  +   ..+...+++ +||.+.+.   +   ||..+. .+++++++++++
T Consensus       368 ~~L~-~l~~~~~~~i~~Vr-G~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~  444 (459)
T PRK11522        368 DGFR-QLAREYPDLVQEAR-GKGMLMAIEFVDNEIGYNFASEMFR-QRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKA  444 (459)
T ss_pred             HHHH-HHHHhCCCceeeEE-eceeEEEEEecCchHHHHHHHHHHH-CCeEEEecCCCCCEEEEECCccCCHHHHHHHHHH
Confidence            7666 5531110  11122 2344433322  1   233455555 69998764   2   776543 599999999999


Q ss_pred             HHHHhhhc
Q 015283          402 IIDSYHNV  409 (410)
Q Consensus       402 l~~~l~~~  409 (410)
                      |.+++.++
T Consensus       445 l~~~l~~~  452 (459)
T PRK11522        445 ARKALAAM  452 (459)
T ss_pred             HHHHHHHH
Confidence            99988653

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.77  E-value=2.6e-16  Score=152.29  Aligned_cols=341  Identities=12%  Similarity=0.041  Sum_probs=186.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-Cc-cCcCCcccHHHHHHHHHHhcCCCCCcccCCc-eEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~-~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~-i~~~~t~g  110 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++.... .+ .+.+.....++.+.+++......    .... +.+  +++
T Consensus        39 ~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~----~~~~~~f~--~~s  110 (442)
T TIGR00709        39 KEYLDFLAGAGTLALGHN--HPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRK----MDYKLQFP--GPS  110 (442)
T ss_pred             CEEEEccccHhhhcCCCC--CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcC----CCccEEEe--CCC
Confidence            568899888653455665  5889999888875421 11 12233333455555555532110    0123 444  689


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCC-------C-----CccceeeecCCC--cc----cChh---
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR-------V-----PWSEYRYYDPKT--VG----LDFE---  168 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g-------~-----~~~~v~~~~~~~--~~----~d~~---  168 (410)
                      |++|++.+.++.+.+....+|+....+|.+...... ..|       .     .+..++..+...  +.    .+.+   
T Consensus       111 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (442)
T TIGR00709       111 GADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASI  190 (442)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHH
Confidence            999999999888877655789888888876643322 111       0     112222211000  00    0111   


Q ss_pred             -hHHHHHh---cCCCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283          169 -GMIADIK---AAPGGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR  243 (410)
Q Consensus       169 -~l~~~i~---~~~~~~~~ii~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~  243 (410)
                       .+++.+.   ...+....+++.+.++..| ..+|.+.++++.++|++||+++|.||++.+|+..   ...+....+ +.
T Consensus       191 ~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~a~~~~-gv  266 (442)
T TIGR00709       191 EYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRS---GTMFAFEHA-GI  266 (442)
T ss_pred             HHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC---CchhHHHHc-CC
Confidence             1233332   1112344444444444445 4578888999999999999999999999999743   234443332 23


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++++   +||.++. |+++|++++   +++ .+.+.   ...... +.+.+.+++.++...|+.-  .    +  +..
T Consensus       267 ~PDiv~---~gK~l~~-G~Pigav~~---~~~-~~~~~---~~~~~~-T~~gnpla~aaa~a~L~~i--~----~--~~l  326 (442)
T TIGR00709       267 EPDFVV---MSKAVGG-GLPLAVLLI---APE-FDAWQ---PAGHTG-TFRGNQLAMVTGTEALNYW--K----D--DNL  326 (442)
T ss_pred             CCcEEE---EcccccC-CcccEEEEE---chH-HhccC---CCcCCC-CCCcCHHHHHHHHHHHHHH--H----h--cCH
Confidence            334443   8999995 899999854   555 33321   111222 3345555555554444311  0    0  133


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C----------------H-HHHHHhhhcCcEEEcCC--
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N----------------K-AQSDNMTNKWHVYMTKD--  382 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~----------------~-~~~~~ll~~~gi~v~~~--  382 (410)
                      .++++++.+++.+.|+ ++....++.......|.+.-+.+  +                . .+...++ ++|+.+.+.  
T Consensus       327 ~~~~~~~g~~l~~~L~-~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~  404 (442)
T TIGR00709       327 AQNAQERGERITSFLD-DMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGGR  404 (442)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecCC
Confidence            3455555555555555 43111111111222233322111  0                1 1233444 469998764  


Q ss_pred             -C---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          383 -G---RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       383 -g---Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                       +   ||..+. +|+++++++++++.+++.+
T Consensus       405 ~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~  435 (442)
T TIGR00709       405 EGEVFRLLCPITIDQEECEEGISRFKQAVEE  435 (442)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence             2   766543 4999999999999998865

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.77  E-value=2.5e-16  Score=147.75  Aligned_cols=319  Identities=13%  Similarity=0.100  Sum_probs=197.4

Q ss_pred             HHHHHH-HHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283           55 DVVKKA-ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI  133 (410)
Q Consensus        55 ~~v~~a-~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~  133 (410)
                      ..+.++ +..+...  +..|.......+|.+++++++..        +++++  +++|+.|++++.  ...+.|||.|  
T Consensus        50 ~aMs~~q~a~~~~G--De~yag~~s~~~lE~~va~~~G~--------~~av~--v~sGT~Al~ll~--~l~l~pGDeV--  113 (450)
T TIGR02618        50 NAMSDKQWAGLMMG--DEAYAGSRNFYHLERTVRELYGF--------KYVVP--THQGRGAENLLS--QIAIKPGDYV--  113 (450)
T ss_pred             HHHHHHHHHHhhhc--chhhcCCCcHHHHHHHHHHHHCC--------CeEEE--cCCHHHHHHHHH--HhCCCCcCEE--
Confidence            455555 4444333  24688888899999999999633        46777  899999999863  3346799977  


Q ss_pred             cCCCC-cchhhhhhhCCCCccceeee--------cCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCC-CCCCCCHHHH
Q 015283          134 SSPTW-GNHKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNP-TGIDPTPEQW  202 (410)
Q Consensus       134 ~~p~y-~~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NP-tG~~~~~~~l  202 (410)
                      +.++| ..+...++..|+..+.++..        .+.++.+|++.+++.+++.. .++.++...+++|- .|+++|.+++
T Consensus       114 psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l  193 (450)
T TIGR02618       114 PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANM  193 (450)
T ss_pred             CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHH
Confidence            66766 44455578888866666432        13457899999999998631 12334444556675 5899999999


Q ss_pred             HHHHHHHHHcCCcccccccCCC-CCC-------CCCCCchhHh-HHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          203 EKIADVIQEKNHIPFFDVAYQG-FAS-------GSLDNDASSV-RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       203 ~~i~~~~~~~~~~li~Deay~~-~~~-------~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      +++.++|++||+.|++|.+... .++       +-.+.+.+-+ +.....  .+...+|..|..+.+   +|.++ .+++
T Consensus       194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~--aD~~~~S~~Kd~~~~---~GG~l-~~~d  267 (450)
T TIGR02618       194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSY--ADGCTMSGKKDCLVN---IGGFL-CMND  267 (450)
T ss_pred             HHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhcc--CcEEEEeeccCCCCC---CceEE-EeCC
Confidence            9999999999999999999643 111       0011112111 121222  344778999987654   34442 4578


Q ss_pred             chhHHHHHHHHHhhccC-cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          274 SDLAARVKSQLKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++++.....+-.. ++...+.....+++..|.+. .    .   +.+.++-....++|.+.|. +.|+    .+..
T Consensus       268 ~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~-~----~---~~y~~~r~~~a~~La~~L~-~~Gv----pv~~  334 (450)
T TIGR02618       268 DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREA-V----D---YEYIEHRVKQVRYLGDKLK-AAGV----PIVE  334 (450)
T ss_pred             HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHh-h----h---HHHHHHHHHHHHHHHHHHH-HCCC----cccC
Confidence            89888876654322111 11121222222223233321 1    0   1222233335677888888 7874    5555


Q ss_pred             CCcceeeecCC-------------CHHHHHHhhhcCcEEEcCC-----------C----------eEEecC--CCcccHH
Q 015283          353 RQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKD-----------G----------RISLAG--LSLAKCE  396 (410)
Q Consensus       353 ~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~-----------g----------Ris~~~--~~~~~i~  396 (410)
                      |.+|.-+|++.             ...++.+|..+.||-..--           |          |++++.  .|.+.++
T Consensus       335 p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~  414 (450)
T TIGR02618       335 PVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMD  414 (450)
T ss_pred             CCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHH
Confidence            66676676632             1235667777777754321           1          888764  4889999


Q ss_pred             HHHHHHHHHhhh
Q 015283          397 YLADAIIDSYHN  408 (410)
Q Consensus       397 ~~~~~l~~~l~~  408 (410)
                      .++++|.++.++
T Consensus       415 ~v~~~~~~~~~~  426 (450)
T TIGR02618       415 VVADGIIKLYKH  426 (450)
T ss_pred             HHHHHHHHHHhh
Confidence            999999988764

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.77  E-value=1.8e-16  Score=149.42  Aligned_cols=210  Identities=10%  Similarity=0.024  Sum_probs=137.2

Q ss_pred             HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCccce
Q 015283           80 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEY  155 (410)
Q Consensus        80 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v  155 (410)
                      ..+++.++..-..       +..+++   ++|++|+..+  +++.+.+||+|++++|.|+++..    .++..|.++..+
T Consensus        67 ~~Le~~la~le~~-------~~~v~~---sSG~aAi~~~--l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~v  134 (395)
T PRK05967         67 DALCKAIDALEGS-------AGTILV---PSGLAAVTVP--FLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYY  134 (395)
T ss_pred             HHHHHHHHHHhCC-------CCEEEE---CcHHHHHHHH--HHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEe
Confidence            3566666665321       345555   6789999988  55668899999999999999865    446778877776


Q ss_pred             eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283          156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS  235 (410)
Q Consensus       156 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~  235 (410)
                      +.   .    +.+.+++.+++   +++++++++|+||++.   ..++++|+++|+++|+++|+|++|....+-    .  
T Consensus       135 d~---~----~~e~l~~al~~---~TklV~lesPsNP~l~---v~dl~~I~~la~~~g~~vvVD~t~a~p~~~----~--  195 (395)
T PRK05967        135 DP---E----IGAGIAKLMRP---NTKVVHTEAPGSNTFE---MQDIPAIAEAAHRHGAIVMMDNTWATPLYF----R--  195 (395)
T ss_pred             CC---C----CHHHHHHhcCc---CceEEEEECCCCCCCc---HHHHHHHHHHHHHhCCEEEEECCccCceec----C--
Confidence            43   1    34678888865   6888999999999876   889999999999999999999998764421    1  


Q ss_pred             HhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHH
Q 015283          236 SVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD  314 (410)
Q Consensus       236 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~  314 (410)
                      ++     ..+.++++.|.+|.++- .+.-.|++   +.+++..+++.....    ......+......+.+-|+.-    
T Consensus       196 pl-----~~GaDivv~S~tKy~~Gh~d~~~G~v---~~~~~~~~~l~~~~~----~~G~~~~p~da~l~~rgl~Tl----  259 (395)
T PRK05967        196 PL-----DFGVDISIHAATKYPSGHSDILLGTV---SANEKCWPQLLEAHG----TLGLCAGPDDTYQILRGLRTM----  259 (395)
T ss_pred             hh-----HcCCCEEEEecccccCCCCCeeEEEE---EcCHHHHHHHHHHHH----HcCCCCCHHHHHHHHcCcccH----
Confidence            11     12356899999999742 33445654   336665555543222    112233333333333333332    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          315 EWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                            ....++..++...+.+.|+ +.+
T Consensus       260 ------~lR~~~~~~na~~lA~~L~-~hp  281 (395)
T PRK05967        260 ------GIRLEHHRKSALEIARWLE-GRP  281 (395)
T ss_pred             ------HHHHHHHHHHHHHHHHHHH-hCC
Confidence                  2333444555666666676 554

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.77  E-value=1.8e-16  Score=136.58  Aligned_cols=320  Identities=14%  Similarity=0.111  Sum_probs=202.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      ..+||.+-..    .  .+..++++++.++...  +..|+......+|.+..|+.+.+        |.-+|  +.+||.+
T Consensus        22 ~~vDLRSDTv----T--~PTdeMr~am~eA~vg--DdVyGeD~tt~rLE~~vA~l~GK--------EAgLF--v~SGTmg   83 (384)
T KOG1368|consen   22 RSVDLRSDTV----T--VPTDEMRRAMAEASVG--DDVYGEDPTTNRLEQRVAELFGK--------EAGLF--VPSGTMG   83 (384)
T ss_pred             eccccccccc----c--CChHHHHHHHhhcccC--cccccCCccHHHHHHHHHHHhCc--------cceee--ecccccc
Confidence            4677775543    3  3358888988887654  46677777788999999999533        44555  5777777


Q ss_pred             HHHHHHHHHHhC-CCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcC-----CCCcEEEE
Q 015283          115 LRLAAALIERYF-PGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-----PGGSFILL  185 (410)
Q Consensus       115 ~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~~~~ii  185 (410)
                      +.++  +..++. +|.+|++-+-++.-..+   +....|..++.  +.+++++.+|++++++.+...     .+.+.++.
T Consensus        84 Nlla--Im~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~t--v~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIc  159 (384)
T KOG1368|consen   84 NLLA--IMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRT--VKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLIC  159 (384)
T ss_pred             cHHH--HHHHhcCCCceEEeccchheeehhccChhhhccceeEe--eeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEE
Confidence            7776  456677 99999997765532211   11123444444  445777889999999998752     35688888


Q ss_pred             eCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283          186 HGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       186 ~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      +-|.+|-+| .++|.+++.++.++|+++|+.+..|.+.-+-..-   ....++..+....+.+-.  -+||.+|.|   +
T Consensus       160 lENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAav---asgV~vk~i~~~fDSVsi--CLSKglgAP---V  231 (384)
T KOG1368|consen  160 LENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAV---ASGVPVKKICSAFDSVSI--CLSKGLGAP---V  231 (384)
T ss_pred             eeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHH---HcCCCHHHHHHhhhhhhh--hhhccCCCC---c
Confidence            888877776 9999999999999999999999999995433211   111244444444433322  378988754   7


Q ss_pred             ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH--HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI--VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      |.+  +.++++.+++.+- +++..   ..+.-..+..+  +...|.+ .+        . ..+.-.++...+.+.+. ..
T Consensus       232 GSV--iVG~k~FI~kA~~-~RKal---GGGmRQsGvLaaaaLval~~-~~--------~-~L~~dHk~A~~lAe~~~-~~  294 (384)
T KOG1368|consen  232 GSV--IVGSKDFIDKARH-FRKAL---GGGMRQSGVLAAAALVALDE-NV--------P-LLRADHKRAKELAEYIN-TP  294 (384)
T ss_pred             ccE--EEccHHHHHHHHH-HHHHh---cCchhHHHHHHHHHHHHhhc-ch--------H-HHHHHHHHHHHHHHHhc-cc
Confidence            987  6678886655433 22221   12222222222  2333332 21        1 22233345555666665 55


Q ss_pred             CCCCCcccccC-Ccceeee-----cCCCHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHH
Q 015283          343 KSGKDWSFILR-QIGMFSF-----TGLNKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIID  404 (410)
Q Consensus       343 g~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~  404 (410)
                      +.   +....+ ....++.     .+++.+.+.+.+++.||.+.++.    ||.+.. +|+++++.+...+++
T Consensus       295 ~~---i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k  364 (384)
T KOG1368|consen  295 EE---IRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSK  364 (384)
T ss_pred             cc---eeeecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHH
Confidence            41   233333 2334444     35577776666677899999875    777665 699999999999943

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.77  E-value=1e-16  Score=146.91  Aligned_cols=201  Identities=15%  Similarity=0.090  Sum_probs=150.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .+.+.|-.+.      +++++++|.+++...+..    ++...|.  ...+.++.|+.+|++++..      +++|+|  
T Consensus        42 ~~~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd------~~dIiF--  107 (428)
T KOG1549|consen   42 TRPVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD------PSDIVF--  107 (428)
T ss_pred             CccEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC------CCcEEE--
Confidence            3556665554      466789999998877633    2212132  3445889999999998765      566999  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCC----EEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283          108 GLSGTGSLRLAAALIERYFPGA----KVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd----~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~  180 (410)
                      |+|+|++++++..-. .+..+|    +|++....|+.....+   +.-|..+..+|..  +++-.|++.+++.+++   +
T Consensus       108 ts~ATEs~Nlvl~~v-~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~---~  181 (428)
T KOG1549|consen  108 TSGATESNNLVLKGV-ARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRS---K  181 (428)
T ss_pred             eCCchHHHHHHHHHh-hccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCC---C
Confidence            999999999984322 233566    9999998887765544   4678899999983  6677899999999986   8


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      ++++.+...+|-+|++.|   +++|+++|+++++.+++|.+ +..+--+.+         ..+.+-+++..|.+|.+|++
T Consensus       182 T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaA-QavG~i~vD---------V~eln~D~~s~s~HK~ygp~  248 (428)
T KOG1549|consen  182 TRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAA-QAVGKIPVD---------VQELNADFLSISAHKIYGPP  248 (428)
T ss_pred             ceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehh-hhcCCcccc---------HHHcCchheeeecccccCCC
Confidence            999999999999999665   55777789999999999999 544421111         23445677888999999999


Q ss_pred             CCCcceEEE
Q 015283          261 AERIGAMNV  269 (410)
Q Consensus       261 G~r~G~l~~  269 (410)
                      |  +|++++
T Consensus       249 ~--iGaLYv  255 (428)
T KOG1549|consen  249 G--IGALYV  255 (428)
T ss_pred             c--ceEEEE
Confidence            9  799976

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.76  E-value=2.4e-16  Score=151.97  Aligned_cols=338  Identities=15%  Similarity=0.104  Sum_probs=192.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|..-...|+.  .|.+.+++.+++.......+ +.....++.+.+++....       .+.+.+  +++|++
T Consensus        53 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~l~~~~p~-------~~~v~f--~~sGse  120 (428)
T PRK12389         53 NKYIDYLAAYGPIITGHA--HPHITKAITEAAENGVLYGT-PTELEIEFAKMLKEAIPS-------LEKVRF--VNSGTE  120 (428)
T ss_pred             CEEEEccccccccccCCC--CHHHHHHHHHHHHhCCccCC-CCHHHHHHHHHHHHhCCC-------CcEEEE--eCCHHH
Confidence            567898877543345554  58899998888765331222 333334555555554321       367888  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCCCcc--------ceeee-cCCC---cccChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS--------EYRYY-DPKT---VGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~--------~v~~~-~~~~---~~~d~~~l~~~i~~~~~~  180 (410)
                      |++.+.++.+.+....+|+...-+|.+.... +...|....        .++.. ..+.   .-.|++.+++.+.+.++.
T Consensus       121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  200 (428)
T PRK12389        121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE  200 (428)
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence            9999998887776557888888888765432 222221100        00000 0000   012678888888754445


Q ss_pred             cEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      ..++++...+.-.|... +..-+++|.++|++||+++|.||++.+|..+ .   .+.. ...+..++++   +++|.++ 
T Consensus       201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~-~---~~a~-~~~gv~PDiv---t~gK~lg-  271 (428)
T PRK12389        201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM-Y---GGAQ-DLLGVEPDLT---ALGKIIG-  271 (428)
T ss_pred             EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC-c---chhh-HHhCCCCCee---eechhhc-
Confidence            66666666677778766 4555999999999999999999999887421 1   1111 1112223443   7899998 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      .|+.+|.+++   ++++.+.+...-.....+++. +|...+...+ ...|.+++           ..++++++.+++.+.
T Consensus       272 gG~Pi~av~~---~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~-----------l~~~~~~~g~~l~~~  337 (428)
T PRK12389        272 GGLPIGAYGG---RKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEG-----------VYEKLDRLGAMLEEG  337 (428)
T ss_pred             CCCceeEEeE---HHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhccc-----------HHHHHHHHHHHHHHH
Confidence            6899999744   777555543110111223333 3333322222 33343332           334455555555555


Q ss_pred             hhhccCCCCCcc-cccCCcceee-ec-C--C---------C----HHHHHHhhhcCcEEEcCCC----eEEecCCCcccH
Q 015283          338 LSAKDKSGKDWS-FILRQIGMFS-FT-G--L---------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSLAKC  395 (410)
Q Consensus       338 l~~~~g~~~~~~-~~~~~~~~~~-~~-~--~---------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~i  395 (410)
                      |+ ++....++. ......+++. .+ .  .         +    ..+...+++ +||++.+.+    .+++. .+++++
T Consensus       338 L~-~l~~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~~~l~-~t~e~i  414 (428)
T PRK12389        338 IL-EAAEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLN-QGINLAPSKYEAWFLTTA-HTEEDI  414 (428)
T ss_pred             HH-HHHHhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHH-CCcEeecCCCCCeeecCC-CCHHHH
Confidence            54 321000011 1112233331 11 1  0         1    123445554 699998864    33433 499999


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      +++++++++++.++
T Consensus       415 d~~~~~l~~~l~~~  428 (428)
T PRK12389        415 EETLEAVDRAFAQL  428 (428)
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999998753

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.76  E-value=1.1e-16  Score=152.45  Aligned_cols=330  Identities=15%  Similarity=0.080  Sum_probs=190.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc------CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      ..-|+|-.+++       ++++.+++++...+.+....+      |.....++++.....+...+.++...  -+|   +
T Consensus        49 ~~~l~LiasEN-------~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~--anv---q  116 (493)
T PRK13580         49 RSSLKLIASEN-------YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH--AYV---Q  116 (493)
T ss_pred             hcCceEecccc-------cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc--ccc---c
Confidence            35688887764       237899988766553322222      33333444444444444444444322  233   3


Q ss_pred             cCChhhHHHHHHHHHHHhCC-------------------------------CCEEEEcCCCCcchhhhhh---hCC--CC
Q 015283          108 GLSGTGSLRLAAALIERYFP-------------------------------GAKVLISSPTWGNHKNIFN---DAR--VP  151 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~-------------------------------gd~Vl~~~p~y~~~~~~~~---~~g--~~  151 (410)
                      ..+|+.|+..+  +.+.+.|                               ||+|+..++..+++...-.   ..|  .+
T Consensus       117 p~Sg~~An~~v--~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~  194 (493)
T PRK13580        117 PHSGADANLVA--FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFH  194 (493)
T ss_pred             CCCcHHHHHHH--HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheee
Confidence            57888888887  4444554                               8999999877766633211   122  34


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      .+.+++. .+++.+|++.+++.+.+   .+..++++..+|- |...   ++++|.++|+++|+++++|+++.....+ .+
T Consensus       195 ~~~y~vd-~~~g~iD~d~l~~~~~~---~~plvii~g~S~~-~~~~---dl~~i~eia~~~gA~L~VD~AH~~Glig-g~  265 (493)
T PRK13580        195 QRSYGVD-PDTGLLDYDEIAALARE---FKPLILVAGYSAY-PRRV---NFAKLREIADEVGAVLMVDMAHFAGLVA-GK  265 (493)
T ss_pred             eEecccC-cccCccCHHHHHHHHhh---cCCEEEEeCcccc-CCCc---CHHHHHHHHHHcCCEEEEECchhhceec-cc
Confidence            4455553 34567999999999986   3334444556555 4444   5667777799999999999996543322 11


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA  311 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~  311 (410)
                      ...   .......+.+++++|++|++.  |-+.|++++   ++++++.+    .......++++......+++..+..  
T Consensus       266 ~~~---~~~~~~~~~D~vtgT~hKaL~--GP~GG~I~~---~~~l~~~L----~~a~P~i~gg~l~p~iAA~avAl~e--  331 (493)
T PRK13580        266 VFT---GDEDPVPHADIVTTTTHKTLR--GPRGGLVLA---KKEYADAV----DKGCPLVLGGPLPHVMAAKAVALAE--  331 (493)
T ss_pred             cch---hhcCCCCCCcEEEeCChhhcc--CCCeEEEEe---cHHHHHHH----hhCCCcccCCCccHHHHHHHHHHHH--
Confidence            100   000111246688999999982  333477644   67755554    2222122333333322222212211  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-CcceeeecCC-----CHHHHHHhhhcCcEEEcC----
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSFTGL-----NKAQSDNMTNKWHVYMTK----  381 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~----  381 (410)
                      ..   ....+++++++.++.++|.+.|. +.|+    .+... ..+..+.+.+     +...+.+.|++.||++.+    
T Consensus       332 ~~---~~ef~~y~~~l~~Na~~La~~L~-~~G~----~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~P  403 (493)
T PRK13580        332 AR---TPEFQKYAQQVVDNARALAEGFL-KRGA----RLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIP  403 (493)
T ss_pred             Hh---CccHHHHHHHHHHHHHHHHHHHH-hcCC----CccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCC
Confidence            00   11124678899999999999999 8884    33211 1223333433     123456566778999863    


Q ss_pred             ---------CC-eEEecC-----CCcccHHHHHHHHHHHhhh
Q 015283          382 ---------DG-RISLAG-----LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       382 ---------~g-Ris~~~-----~~~~~i~~~~~~l~~~l~~  408 (410)
                               .+ ||+...     ++++|++++++.|.++++.
T Consensus       404 tvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~  445 (493)
T PRK13580        404 SDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN  445 (493)
T ss_pred             CCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence                     12 887543     4589999999999988764

>PRK06541 hypothetical protein; Provisional

Probab=99.75  E-value=5.3e-16  Score=150.32  Aligned_cols=343  Identities=13%  Similarity=0.078  Sum_probs=194.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCc--cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~--~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++... +..  .| ......++.+.+++.....      .+.+.+  +++
T Consensus        52 ~~ylD~~~g~~~~~lGh~--~p~v~~Av~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~------~~~v~f--~~s  120 (460)
T PRK06541         52 KRYLDGLAGLFVVQVGHG--RAELAEAAAKQAGTLAFFPLWSY-AHPPAIELAERLAALAPGD------LNRVFF--TTG  120 (460)
T ss_pred             CEEEECCccHHhccCCCC--CHHHHHHHHHHHhhCcCcccccc-CCHHHHHHHHHHHHhCCCC------cCEEEE--cCC
Confidence            467888877432344554  588999888887542 111  12 2223345555555543211      357899  999


Q ss_pred             hhhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCC---cccC--
Q 015283          111 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT---VGLD--  166 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~---~~~d--  166 (410)
                      |++|++.+.++.+.+.     + ..+|+...-+|.+...... ..|.            .+..+|..+...   +.-+  
T Consensus       121 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  200 (460)
T PRK06541        121 GSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPE  200 (460)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHH
Confidence            9999999988887652     1 3678888877765532211 1111            111222110000   1111  


Q ss_pred             ------hhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          167 ------FEGMIADIKAA-PGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       167 ------~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                            ++.+++.+.+. +....++++...++++|.+.+ .+.+++|.++|++||+++|+||++.+|+-.   ...+...
T Consensus       201 ~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~---G~~~a~~  277 (460)
T PRK06541        201 AFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRL---GEMFGCE  277 (460)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---chhhhhh
Confidence                  35667766532 234566665555999998876 666999999999999999999999888632   2222222


Q ss_pred             HHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283          239 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK  317 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~  317 (410)
                      .+ +..++++   ++||.++ .|+ ++|+++.   ++++.+.+...........+...+.++..++...|+-  +    .
T Consensus       278 ~~-gv~PDiv---t~gK~l~-~G~~pigav~~---~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~--l----~  343 (460)
T PRK06541        278 RF-GYVPDII---TCAKGIT-SGYSPLGAMIA---SDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDI--F----E  343 (460)
T ss_pred             hc-CCCCCEE---Eeccccc-CCccceeEEEE---cHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHH--H----H
Confidence            11 2223443   5899998 787 9999755   6675554432111111111222333333333322221  0    0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCCc-ccccCCcceeee-c-C-------CC---------HHHHHHhhhcCcEE
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW-SFILRQIGMFSF-T-G-------LN---------KAQSDNMTNKWHVY  378 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~-~-~-------~~---------~~~~~~ll~~~gi~  378 (410)
                        -+...++++++.+++.+.|+ ++.. .++ ......+.++.+ + .       ++         ..+...+++ +||+
T Consensus       344 --~~~~~~~~~~~g~~l~~~L~-~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~  418 (460)
T PRK06541        344 --REGLLDHVRDNEPAFRATLE-KLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFE-AGLY  418 (460)
T ss_pred             --hccHHHHHHHHHHHHHHHHH-Hhhc-CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHh-CCeE
Confidence              02345677777888888777 6531 111 123333333321 1 1       00         012345555 6999


Q ss_pred             EcCC--C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          379 MTKD--G----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       379 v~~~--g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.+.  |    ||+.+. +|++++++++++|.+++.++
T Consensus       419 ~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~  456 (460)
T PRK06541        419 CRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA  456 (460)
T ss_pred             EEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9763  3    777652 49999999999999998653

>PRK02769 histidine decarboxylase; Provisional

Probab=99.75  E-value=7.4e-16  Score=145.36  Aligned_cols=296  Identities=15%  Similarity=0.101  Sum_probs=184.4

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCc--eEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQR--VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR  156 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~--i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~  156 (410)
                      ..++.+.+.+++....+.+  +++  ..+  |+|||+++..+....+.+.+++.|++++-.|.+....++..|.+.+.++
T Consensus        63 ~~~~e~~~~~~~a~l~g~~--~~~~~G~~--TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~  138 (380)
T PRK02769         63 SFDFERDVMNFFAELFKIP--FNESWGYI--TNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVIT  138 (380)
T ss_pred             hHHHHHHHHHHHHHHhCCC--CCCCCEEE--ecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceec
Confidence            3445555555544444432  233  366  9999999876643344456889999999999999999999999888888


Q ss_pred             eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC---CcccccccCCCCCCCCCCCc
Q 015283          157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN---HIPFFDVAYQGFASGSLDND  233 (410)
Q Consensus       157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~---~~li~Deay~~~~~~~~~~~  233 (410)
                      ..  .++.+|++.|++.+.+.+.++.+++.+.++|+||.   .+++++|+++|+++|   +++++|.+|.++...-. ..
T Consensus       139 ~~--~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~---idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~-~~  212 (380)
T PRK02769        139 SL--PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGA---IDNIKEIQEILKKIGIDDYYIHADAALSGMILPFV-NN  212 (380)
T ss_pred             cC--CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcc---cCCHHHHHHHHHHhCCCceEEEEEecccceeeccc-Cc
Confidence            73  46779999999999874445888888899999999   555667777899998   69999999877553211 01


Q ss_pred             hhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC---ccc-CCCh---hHHHHHHHH
Q 015283          234 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP---MYS-NPPV---HGARIVANV  306 (410)
Q Consensus       234 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~---~~~~~a~~~  306 (410)
                      ...+ .+ .. ..+.+..|.+|.++.| .++|.+++   .++..+.+... ..+...   +.. +.+.   ++..++...
T Consensus       213 ~~~~-d~-~~-~vDsis~s~HK~~~~P-~g~G~l~~---r~~~~~~~~~~-~~yl~~~d~t~~GSR~g~~~l~lw~aL~~  284 (380)
T PRK02769        213 PPPF-SF-AD-GIDSIAISGHKFIGSP-MPCGIVLA---KKKYVERISVD-VDYIGSRDQTISGSRNGHTALLLWAAIRS  284 (380)
T ss_pred             cccC-Cc-cC-CCCEEEECCcccCCCC-CCcEEEEE---ehhhhhhcccC-ccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence            0011 00 11 4567778999988733 45788754   44433333211 011001   111 1222   222222222


Q ss_pred             hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCC-eE
Q 015283          307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG-RI  385 (410)
Q Consensus       307 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g-Ri  385 (410)
                      +.        .+.+++..++..+..+++.+.|+ +.|+   ..+..|......|-..+.+.    .++..+...+.. |+
T Consensus       285 lg--------~~G~~~~~~~~~~la~~l~~~L~-~~g~---~~~~~p~~~~v~f~~~~~~~----~~~w~l~~~~~~~hi  348 (380)
T PRK02769        285 LG--------SKGLRQRVQHCLDMAQYAVDRLQ-ANGI---PAWRNPNSITVVFPCPSERI----WKKWHLATSGNQAHI  348 (380)
T ss_pred             HC--------HHHHHHHHHHHHHHHHHHHHHHH-hCCC---EEEcCCCceEEEEcCCCHHH----HhCeeEcccCCEEEE
Confidence            22        23457888889999999999998 7764   12344544444443223222    233333333333 77


Q ss_pred             EecC-CCcccHHHHHHHHHHHhhh
Q 015283          386 SLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       386 s~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+.. ++.+.++.+++.|...+..
T Consensus       349 ~~~~~~~~~~~~~f~~dl~~~~~~  372 (380)
T PRK02769        349 ITMPHHNKQQIDSLIDELIFDLKN  372 (380)
T ss_pred             EECCCCCHHHHHHHHHHHHHHHhc
Confidence            7544 5888999999999887654

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.75  E-value=3.5e-16  Score=148.27  Aligned_cols=167  Identities=17%  Similarity=0.171  Sum_probs=119.0

Q ss_pred             cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCc
Q 015283           77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPW  152 (410)
Q Consensus        77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~  152 (410)
                      .....|++.++++....       ..++   +++|+.++.++   +..+.+||+|++++|.|++...    .+...|.++
T Consensus        50 p~~~~Le~~la~l~g~~-------~al~---~~SG~~Al~~~---l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v  116 (380)
T PRK06176         50 PTRFALEELIADLEGGV-------KGFA---FASGLAGIHAV---FSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSC  116 (380)
T ss_pred             hhHHHHHHHHHHHhCCC-------CEEE---ECCHHHHHHHH---HHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEE
Confidence            34778999999995322       3344   57788888764   3457899999999999976543    344567776


Q ss_pred             cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283          153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN  232 (410)
Q Consensus       153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~  232 (410)
                      ..++.       .|++.+++.+++   +++++++.+|+||||.+.+   +++|+++|+++|+++|+|++|......   .
T Consensus       117 ~~vd~-------~d~e~l~~ai~~---~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~---~  180 (380)
T PRK06176        117 TIIDT-------SDLSQIKKAIKP---NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ---N  180 (380)
T ss_pred             EEcCC-------CCHHHHHHhcCc---CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC---C
Confidence            66654       378889888865   6788888999999999665   667788899999999999998754422   1


Q ss_pred             chhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283          233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK  281 (410)
Q Consensus       233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~  281 (410)
                         ++     ....++++.|++|.++.+|-.+|.++ +++++++.+++.
T Consensus       181 ---p~-----~~gaDivv~S~tK~l~g~~d~~gG~v-v~~~~~~~~~~~  220 (380)
T PRK06176        181 ---PL-----LLGADIVVHSGTKYLGGHSDVVAGLV-TTNNEALAQEIA  220 (380)
T ss_pred             ---cc-----ccCCCEEEecCceeccCCccceeeEE-EecHHHHHHHHH
Confidence               11     11356889999999976664444442 455566555554

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.75  E-value=4.6e-16  Score=149.29  Aligned_cols=336  Identities=14%  Similarity=0.093  Sum_probs=188.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.......+ +.....++.+.+.+.+...      .+.+.+  +++|++
T Consensus        53 ~~yiD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~L~~~~~~~------~~~v~f--~~SGsE  121 (433)
T PRK00615         53 KTFIDFCGSWGSLIHGHS--HPKICDAIQQGAERGTSYGL-TSEQEILFAEELFSYLGLE------DHKIRF--VSSGTE  121 (433)
T ss_pred             CEEEEcccchhccccCCC--CHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCCCC------cCEEEE--eCchHH
Confidence            567899877543345654  58899988888765331222 3333445666666553211      257888  899999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-h---hhCCCC---c-cce--eeecCC--C-cccChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNI-F---NDARVP---W-SEY--RYYDPK--T-VGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~---~~~g~~---~-~~v--~~~~~~--~-~~~d~~~l~~~i~~~~~~  180 (410)
                      |++.+.++.+.+....+|+....+|.++... +   ...+..   . ...  +.....  . .-.|++.+++.+.+.+++
T Consensus       122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  201 (433)
T PRK00615        122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHR  201 (433)
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCc
Confidence            9999998887775557888888888775421 1   111100   0 000  000000  0 012678888888654445


Q ss_pred             cEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      ..++++.....-.|...+ .+-+++|.++|++||+++|+||++.++..+    ..+.... .+..++++   +++|.+| 
T Consensus       202 ~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G----~~ga~~~-~gv~PDi~---~~gK~lg-  272 (433)
T PRK00615        202 VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVA----QGGAAAI-YHVKPDIT---VYGKILG-  272 (433)
T ss_pred             eEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccccc----HhHHHHh-cCCCCCeE---EEccccc-
Confidence            566666655666677665 455999999999999999999998777322    1222211 12223443   4899998 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      .|+.+|++++   ++++.+.+.........+++. .+.++..++   ...+++++           ..++++++.+++.+
T Consensus       273 gG~p~~av~~---~~~i~~~~~~~~~~~~~~T~~-g~p~~~aa~la~L~~i~~~~-----------~~~~~~~~g~~l~~  337 (433)
T PRK00615        273 GGLPAAAVVA---HKSIMDHLAPEGTIFQAGTLS-GNPLAMAAGKASINLCREQG-----------FYTQLSTLEQNFLS  337 (433)
T ss_pred             CCcceeeeee---cHHHHhhhcCCCCcccCCCCc-ccHHHHHHHHHHHHHHhccc-----------HHHHHHHHHHHHHH
Confidence            6787888644   777555543210111222332 223333333   33333322           23344444444433


Q ss_pred             Hhhh---ccCCCCCcccccCCcceeee-c-CC-----------CH----HHHHHhhhcCcEEEcCCC--e--EEecCCCc
Q 015283          337 SLSA---KDKSGKDWSFILRQIGMFSF-T-GL-----------NK----AQSDNMTNKWHVYMTKDG--R--ISLAGLSL  392 (410)
Q Consensus       337 ~l~~---~~g~~~~~~~~~~~~~~~~~-~-~~-----------~~----~~~~~ll~~~gi~v~~~g--R--is~~~~~~  392 (410)
                      .|++   +.|.+  +.... .+.++.+ + ..           +.    .+...+++ +||++.+..  .  +|... |+
T Consensus       338 ~l~~~~~~~g~~--v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~ls~~h-t~  412 (433)
T PRK00615        338 PIEEMIRSQGFP--VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPFEASFLSSAH-SM  412 (433)
T ss_pred             HHHHHHHHcCCC--eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCccccccceecCC-CH
Confidence            3330   33321  12221 2222211 0 00           11    23455555 699998864  2  56655 99


Q ss_pred             ccHHHHHHHHHHHhhhc
Q 015283          393 AKCEYLADAIIDSYHNV  409 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~~  409 (410)
                      ++|+++++.+.+++++.
T Consensus       413 ~did~~~~a~~~~~~~~  429 (433)
T PRK00615        413 ENLDYAQNVLIDSLEKV  429 (433)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998763

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.74  E-value=7.8e-16  Score=148.63  Aligned_cols=339  Identities=12%  Similarity=0.055  Sum_probs=190.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc---cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++......   .| ......++.+.+++.....     ..+.+.+  +++
T Consensus        54 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lAe~L~~~~p~~-----~~~~v~f--~~S  123 (441)
T PRK05769         54 NVYLDFNAGIAVTNVGHA--HPKVVKAVKEQAEKFLHYSLTDF-YYEPAVELAERLVEIAPGG-----FEKKVFF--TNS  123 (441)
T ss_pred             CEEEECCCchhhcccCCC--CHHHHHHHHHHHHhccCccCccc-CCHHHHHHHHHHHHhCCCC-----CCCEEEE--CCc
Confidence            457788777543345554  588888888877542111   12 1222345555555543211     0357899  999


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-hhCCC-------------CccceeeecCCC--cc-c--------
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYDPKT--VG-L--------  165 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-~~~g~-------------~~~~v~~~~~~~--~~-~--------  165 (410)
                      |++|++.+.++.+.+...++|+..+.+|.+..... ...+.             .+..++..+...  +. -        
T Consensus       124 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (441)
T PRK05769        124 GTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNA  203 (441)
T ss_pred             hHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHH
Confidence            99999999888877766678888888886654322 21111             111222210000  00 0        


Q ss_pred             ChhhHHH-HHhc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh
Q 015283          166 DFEGMIA-DIKA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA  241 (410)
Q Consensus       166 d~~~l~~-~i~~--~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~  241 (410)
                      +++.+++ .+..  .++...++++...+...|... +.+.++++.++|++||+++|+||++.+++..   ...+....+ 
T Consensus       204 ~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~---G~~~a~~~~-  279 (441)
T PRK05769        204 VLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRT---GKMFAIEHF-  279 (441)
T ss_pred             HHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---cceehhhcc-
Confidence            1233454 2221  234566666555566667755 4556999999999999999999999987632   122222222 


Q ss_pred             hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283          242 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME  321 (410)
Q Consensus       242 ~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~  321 (410)
                      +..++++   ++||.++ .|+++|++++   ++++.+    .......++++ .+.+++.++...|+--      ++   
T Consensus       280 gv~pDiv---t~~K~l~-~G~p~gav~~---~~~i~~----~~~~~~~~T~~-g~p~~~aaa~a~L~~l------~~---  338 (441)
T PRK05769        280 GVEPDII---TLAKAIA-GGLPLGAVIG---RAELMF----LPPGSHANTFG-GNPVAAAAALATLEEL------EE---  338 (441)
T ss_pred             CCCCCEE---EEccccc-CCcccEEEEE---ehhhhh----cCCCCCCCCCC-cCHHHHHHHHHHHHHH------HH---
Confidence            2223444   5899998 7899999754   666432    22222233333 3444445554443311      11   


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C---------HHHHHHhhhcCcEEEcCCC----eEE
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N---------KAQSDNMTNKWHVYMTKDG----RIS  386 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~ll~~~gi~v~~~g----Ris  386 (410)
                      ...++.+++.++|.+.|+ ++....++.......|.+.-+.+  +         ..+...+++ .||++.+.|    ||+
T Consensus       339 ~~~~~~~~~g~~l~~~L~-~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~Gil~~~~~~~~lr~~  416 (441)
T PRK05769        339 GLLENAQKLGEYLRKELK-ELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFK-RGLLLLGAGKSAIRII  416 (441)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHh-CCcEEecCCCCEEEEe
Confidence            345566666667777665 54311111111122233322111  1         123445555 699998765    777


Q ss_pred             ecC-CCcccHHHHHHHHHHHhhhc
Q 015283          387 LAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       387 ~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+. +|+++++++++++++++.++
T Consensus       417 p~l~~t~~~id~~~~~l~~~l~~~  440 (441)
T PRK05769        417 PPLIITEEEADIGLEILEEAIKEL  440 (441)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHh
Confidence            543 49999999999999998764

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.74  E-value=4e-16  Score=139.40  Aligned_cols=343  Identities=15%  Similarity=0.145  Sum_probs=221.2

Q ss_pred             cccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--Ccc----CcCCcccHHHHHHHHHHhcCCC
Q 015283           21 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKE----YLPIEGLAAFNKVTAELLFGAD   94 (410)
Q Consensus        21 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~----y~~~~g~~~lr~aia~~~~~~~   94 (410)
                      .+.++..+.+....++--+.+++|+....+    |.|.+|+.+.++..-  ..+    -+...-..+|...+|++ +.+ 
T Consensus       158 ~fP~A~~~se~t~k~VtVWCSNDYLgms~H----p~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~L-HqK-  231 (570)
T KOG1360|consen  158 EFPLAHRYSEATEKKVTVWCSNDYLGMSRH----PEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADL-HQK-  231 (570)
T ss_pred             hccchhhccccccCceEEEecCccccccCC----hHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHH-hcC-
Confidence            344555666654455666677777655554    677777777663310  011    11112245788888888 444 


Q ss_pred             CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283           95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI  174 (410)
Q Consensus        95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i  174 (410)
                           +..++|   ++.--|++.....++..-||-.|.-.+..+.+.+..++..++.=..+..       -|+++|++++
T Consensus       232 -----~aALlF---sSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL  296 (570)
T KOG1360|consen  232 -----EAALLF---SSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLL  296 (570)
T ss_pred             -----cceeee---eeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHH
Confidence                 345555   5555566655444555569888888778887777777777665555554       2889999888


Q ss_pred             hcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283          175 KAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY  253 (410)
Q Consensus       175 ~~~-~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  253 (410)
                      .+. +..++++.+.+.+.-+|.   ...+++|++++++||.+-++||++.--.+++... ..+-+. .-...-+|+.+++
T Consensus       297 ~~~~~svPKivAFEtVhSM~Ga---vcpleelcDvah~yGAiTFlDEVHAVGlYG~rGa-Gvgerd-Gvm~kvDiIsGTL  371 (570)
T KOG1360|consen  297 QSSPKSVPKIVAFETVHSMDGA---VCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGA-GVGERD-GVMHKVDIISGTL  371 (570)
T ss_pred             HhCCCCCCceEEEeeeeccCCC---cCCHHHHHHHHHHhCceeeeehhhhhccccCCCC-CccccC-Ccchhhhhcccch
Confidence            764 456788888888999999   4556678888999999999999965433332211 001000 0011256889999


Q ss_pred             cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH--HHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      .|+||.-|   ||+   +....+++.++.+....++. ++-||.....++  ..+|+.++-        ...|++-+++.
T Consensus       372 gKafGcVG---GYI---Aat~~LvDmiRSyAaGFIFT-TSLPP~vl~GAleaVr~lk~~eg--------~~lR~~hqrnv  436 (570)
T KOG1360|consen  372 GKAFGCVG---GYI---AATRKLVDMIRSYAAGFIFT-TSLPPMVLAGALEAVRILKSEEG--------RVLRRQHQRNV  436 (570)
T ss_pred             hhhccccc---cee---hhhhhHHHHHHHhcCceEEe-cCCChHHHHhHHHHHHHHhhhhh--------HHHHHHHHHHH
Confidence            99999887   895   44788888888877777765 344554443443  455554322        35667777788


Q ss_pred             HHHHHHhhhccCCCCCcccccCCccee-eecCC---CHHHHHHhhhcCcEEEcC-------CC----eEEec-CCCcccH
Q 015283          332 QKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGL---NKAQSDNMTNKWHVYMTK-------DG----RISLA-GLSLAKC  395 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~---~~~~~~~ll~~~gi~v~~-------~g----Ris~~-~~~~~~i  395 (410)
                      .++.+.|. +.|+    .+++..+-+. +.++.   .....+.|+.++||++..       -|    ||+.. ..|++.+
T Consensus       437 ~~~kq~l~-~~Gi----PVi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm  511 (570)
T KOG1360|consen  437 KYVKQLLM-ELGI----PVIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMM  511 (570)
T ss_pred             HHHHHHHH-HcCC----cccCCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHH
Confidence            88888898 8884    3333332222 33343   345578899999999854       24    77643 2488899


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      +.+++.+..+++++
T Consensus       512 ~~lv~~l~~vw~~v  525 (570)
T KOG1360|consen  512 NILVNALLDVWNEV  525 (570)
T ss_pred             HHHHHHHHHHHHHc
Confidence            99999999988764

>PRK06062 hypothetical protein; Provisional

Probab=99.73  E-value=1.1e-15  Score=147.91  Aligned_cols=338  Identities=12%  Similarity=0.049  Sum_probs=186.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.....  ..| ......++.+.+++.....      .+.+.+  +++|
T Consensus        53 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG  121 (451)
T PRK06062         53 RRYLDFSSQLVNTNIGHQ--HPKVVAAIQEQAARLCTVAPAH-ANDARSEAARLIAERAPGD------LSKVFF--TNGG  121 (451)
T ss_pred             CEEEEcccCHHhhcCCCC--CHHHHHHHHHHHHhcCCcCCcc-CCHHHHHHHHHHHHhCCCC------CCEEEE--cCCh
Confidence            567888877542344554  58888888887754211  122 2233345555655553211      368999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhCCC-----------CccceeeecCC--Ccc--cC-------hh
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV-----------PWSEYRYYDPK--TVG--LD-------FE  168 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~g~-----------~~~~v~~~~~~--~~~--~d-------~~  168 (410)
                      ++|++.+.++.+.+....+|+....+|.+... .+...+.           .+..++.....  .+.  -|       ++
T Consensus       122 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  201 (451)
T PRK06062        122 ADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALA  201 (451)
T ss_pred             HHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHH
Confidence            99999998888777655788888887766542 2211111           01111110000  010  12       56


Q ss_pred             hHHHHHhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          169 GMIADIKAA-PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       169 ~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      .+++.+... +++..++++...+.-.|.+. +.+-++++.++|++||+++|+||++.+|+-.   ...+....+ +-.++
T Consensus       202 ~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRt---G~~~a~~~~-gv~PD  277 (451)
T PRK06062        202 HLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRT---GKWFAIEHF-GVVPD  277 (451)
T ss_pred             HHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcC---cHHHHHHhc-CCCCC
Confidence            677777543 23455666555566667775 4555999999999999999999999987632   223333222 22234


Q ss_pred             EEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~  322 (410)
                      ++   +++|.++ .| +.+|.+++   ++++.+.+... ......+++ .+.++..++   ...+++++           
T Consensus       278 i~---t~gK~lg-gG~~Pigav~~---~~~i~~~~~~~-~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~~-----------  337 (451)
T PRK06062        278 LI---TFAKGVN-SGYVPLGGVAI---SEAIAATFADR-PYPGGLTYS-GHPLACAAAVATINAMEEEG-----------  337 (451)
T ss_pred             ee---eechhhh-cCCcCcEEEEE---cHHHHHHhccC-CCCCCCCCC-CCHHHHHHHHHHHHHHHhcC-----------
Confidence            33   6899998 57 48888754   66755544210 001122333 223333333   33333322           


Q ss_pred             HHHHHHHHH-HHHHHHhhhccCCCCCc-ccccCCcceeeecCC-------------------CHHHHHHhhhcCcEEEcC
Q 015283          323 MAGRIKNVR-QKLFDSLSAKDKSGKDW-SFILRQIGMFSFTGL-------------------NKAQSDNMTNKWHVYMTK  381 (410)
Q Consensus       323 ~~~~~~~~~-~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~-------------------~~~~~~~ll~~~gi~v~~  381 (410)
                      ..++.++.. +++.+.|+ ++....+. ...... |.+.-+.+                   ...+...+++ .||++.+
T Consensus       338 l~~~~~~~G~~~l~~~L~-~l~~~~~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~~  414 (451)
T PRK06062        338 IVENAARIGAEVLGPGLR-ELAERHPSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACKE-RGLLPFV  414 (451)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHhcCCcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHH-CCcEEee
Confidence            223333333 23444443 32110001 112222 22211111                   0123445554 6999876


Q ss_pred             CC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          382 DG---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       382 ~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+   ||+.+. +|+++++++++++++++..+
T Consensus       415 ~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~  446 (451)
T PRK06062        415 NGNRIHVVPPCTVTEDEVREGLAILDAALAVA  446 (451)
T ss_pred             cCCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence            54   776542 59999999999999998764

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.73  E-value=1.9e-15  Score=142.32  Aligned_cols=305  Identities=13%  Similarity=0.072  Sum_probs=187.5

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCC-CCcchhhhhhhCC
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSP-TWGNHKNIFNDAR  149 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p-~y~~~~~~~~~~g  149 (410)
                      ..|.......+|.+++++++..        +.++.  +++||.|++++  +...+.+||.|  +.. .+......+...|
T Consensus        72 d~Yagd~s~~~LE~~vAe~lG~--------e~aV~--v~sGTaAl~ll--~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G  137 (460)
T PRK13237         72 EAYAGSRNFYHLEETVQEYYGF--------KHVVP--THQGRGAENLL--SRIAIKPGQYV--PGNMYFTTTRYHQELNG  137 (460)
T ss_pred             hhhcCCCcHHHHHHHHHHHHCC--------CeEEE--eCCHHHHHHHH--HHhCCCCcCEE--CCccchHhhHHHHHhCC
Confidence            5688888899999999999633        35666  89999999986  33346799965  443 4444444467778


Q ss_pred             CCccceee--------ecCCCcccChhhHHHHHhcC-CCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCccccc
Q 015283          150 VPWSEYRY--------YDPKTVGLDFEGMIADIKAA-PGGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFD  219 (410)
Q Consensus       150 ~~~~~v~~--------~~~~~~~~d~~~l~~~i~~~-~~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~D  219 (410)
                      +....+..        .+..++.+|++.+++.+++. .+++.++...+++|.. |+..|.++++++.++|++||+.||+|
T Consensus       138 a~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D  217 (460)
T PRK13237        138 GIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD  217 (460)
T ss_pred             cEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence            75444431        12456889999999999763 2233333334477888 79999999999999999999999999


Q ss_pred             ccCCCC----CC---CCCCCchhHhHHHhh-c-CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283          220 VAYQGF----AS---GSLDNDASSVRLFAT-R-GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP  290 (410)
Q Consensus       220 eay~~~----~~---~~~~~~~~~~~~~~~-~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~  290 (410)
                      .+...-    .-   .++..  .++..... . ...+....|++|.++.+ . -|++  .+++++++++++...-..-..
T Consensus       218 aAra~gna~fI~~re~~y~~--~~i~ei~~e~~s~aD~~t~S~~K~~~~~-~-GG~i--~t~D~eL~~~~r~~~~~~eG~  291 (460)
T PRK13237        218 ATRCVENAYFIKEREEGYQD--KSIKEIVHEMFSYADGCTMSGKKDCLVN-I-GGFL--AMNDEELFDEAKELVVVYEGM  291 (460)
T ss_pred             CcchhcChhhhcccccccCC--CcHhHHhhhccCcCcEEEEeCCCCCCCC-C-ceEE--EECCHHHHHHHHHhccccCCC
Confidence            995422    10   00100  11111111 1 12456677899998754 2 2555  678888777765542211111


Q ss_pred             -cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------
Q 015283          291 -MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------  363 (410)
Q Consensus       291 -~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------  363 (410)
                       ++.+.+..-..+++.-|.+.      .+  ..+.+.--+..++|.+.|. +.|    +.+..|.+|.-+|++.      
T Consensus       292 ~tygg~~grd~~alAvgl~E~------~~--~~y~~~ri~~~~~l~~~L~-~~G----vpv~~p~ggH~v~vda~~~lph  358 (460)
T PRK13237        292 PSYGGMAGRDMEAMAIGIEES------VQ--YEYIEHRVGQVRYLGEKLL-AAG----VPIVEPVGGHAVFLDARRFLPH  358 (460)
T ss_pred             cCCCChhhhHHHHHHhHHHhh------ch--HHHHHHHHHHHHHHHHHHH-HCC----CceecCCCceEEEEEhHHhCCC
Confidence             22222222223333223321      11  1222333335677888888 888    3556677776666631      


Q ss_pred             -------CHHHHHHhhhcCcEEEcCC-----------C----------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          364 -------NKAQSDNMTNKWHVYMTKD-----------G----------RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       364 -------~~~~~~~ll~~~gi~v~~~-----------g----------Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                             ...++.+|..+.||-..--           |          |++++.  .|.+.++.++++|.++.++
T Consensus       359 ~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~  433 (460)
T PRK13237        359 LPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH  433 (460)
T ss_pred             CCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence                   1345667777777754321           1          888764  4889999999999988764

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.73  E-value=2.4e-15  Score=135.29  Aligned_cols=326  Identities=17%  Similarity=0.204  Sum_probs=206.2

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC------cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .-|+|-..++       ++++.|+++.-..+.+.....|      ....-++++.+...+.....+|..  --|+   +.
T Consensus        27 ~~ieLIASEN-------~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~--~anV---QP   94 (413)
T COG0112          27 EHIELIASEN-------FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAE--YANV---QP   94 (413)
T ss_pred             hceeeeeccc-------cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCC--cccc---CC
Confidence            5688887765       2379999987665533222333      222223333333333333333322  1233   35


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh---hhCCC--CccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---NDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~---~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      .+|++|+..+  +++.+.|||+|+-.+..++++...-   ...|.  +.+.+++ +.++..+|.|++++...++  ++++
T Consensus        95 hSGs~AN~av--~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~v-d~et~~IDyD~~~k~a~e~--kPK~  169 (413)
T COG0112          95 HSGSQANQAV--YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGV-DPETGLIDYDEVEKLAKEV--KPKL  169 (413)
T ss_pred             CCchHHHHHH--HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccc-ccccCccCHHHHHHHHHHh--CCCE
Confidence            8888988888  5667899999999998887775543   23343  4455555 3467889999999998874  5566


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC-CCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      ++...--.|  .   .-+++++.++|.+-|.+++.|.+| .++..++..+.+.        ....++.+|.+|+|  +|-
T Consensus       170 ii~G~SaY~--r---~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~--------~~AdvVTtTTHKTl--rGP  234 (413)
T COG0112         170 IIAGGSAYS--R---PIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL--------PHADVVTTTTHKTL--RGP  234 (413)
T ss_pred             EEECccccc--c---ccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC--------CccceEeCCcccCC--CCC
Confidence            664332222  2   346778888899999999999997 3444433222211        12678899999997  588


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK  341 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  341 (410)
                      |-|.+  .+.+++    +.+.+....++... +|..+...+.+-.+.     +..+-.++++.++..++.+.|.+.|. +
T Consensus       235 rGG~I--l~~~ee----l~kkin~aVFPg~qggpl~HviAakaVa~~-----Eal~p~fk~Ya~qVv~NAkaLAe~l~-~  302 (413)
T COG0112         235 RGGII--LTNDEE----LAKKINSAVFPGLQGGPLMHVIAAKAVAFK-----EALEPEFKEYAKQVVKNAKALAEALK-E  302 (413)
T ss_pred             CceEE--EeccHH----HHHHhhhhcCCccCCChHHHHHHHHHHHHH-----HHcChhHHHHHHHHHHHHHHHHHHHH-H
Confidence            87876  444446    55555555555333 444443222222222     11233357888999999999999999 8


Q ss_pred             cCCCCCcccccCCcceeee-cC-----CCHHHHHHhhhcCcEEEcCC-------------C-eEEec-----CCCcccHH
Q 015283          342 DKSGKDWSFILRQIGMFSF-TG-----LNKAQSDNMTNKWHVYMTKD-------------G-RISLA-----GLSLAKCE  396 (410)
Q Consensus       342 ~g~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~ll~~~gi~v~~~-------------g-Ris~~-----~~~~~~i~  396 (410)
                      .|    +++....+-.+.+ ++     ++.+.++.+|++.||.+...             | ||...     +..+++++
T Consensus       303 ~G----~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~  378 (413)
T COG0112         303 RG----FKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEME  378 (413)
T ss_pred             cC----CeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHH
Confidence            88    4555444444433 33     35778899999999988542             3 88533     35788999


Q ss_pred             HHHHHHHHHhhh
Q 015283          397 YLADAIIDSYHN  408 (410)
Q Consensus       397 ~~~~~l~~~l~~  408 (410)
                      ++.+.|.+++..
T Consensus       379 ~Ia~~I~~vl~~  390 (413)
T COG0112         379 EIADLIADVLDG  390 (413)
T ss_pred             HHHHHHHHHHhc
Confidence            999999998875

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.73  E-value=3.7e-16  Score=147.97  Aligned_cols=193  Identities=21%  Similarity=0.152  Sum_probs=130.8

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI  133 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~  133 (410)
                      .++.++++.+.+.+++...+  ..-+.++.+++++++..        ++.+.  +++||.|+.++...+ .+.+||+|++
T Consensus         4 ~~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~g~--------~~~~~--~~sgt~Al~~al~~l-~~~~gdeVi~   70 (363)
T PF01041_consen    4 TEEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYFGV--------KYAVA--VSSGTSALHLALRAL-GLGPGDEVIV   70 (363)
T ss_dssp             HHHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHHT-TGGTTSEEEE
T ss_pred             CHHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHhCC--------CeEEE--eCChhHHHHHHHHhc-CCCcCceEec
Confidence            45666777777766542222  34567999999999743        45666  799999999984322 3459999999


Q ss_pred             cCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015283          134 SSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN  213 (410)
Q Consensus       134 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~  213 (410)
                      |..+|......+...|++++.+++. .+++.+|++.+++.+++   ++++++   +.+.-|.   ..++.+|.++|+++|
T Consensus        71 p~~t~~~~~~ai~~~G~~pv~~Di~-~~~~~id~~~~~~~i~~---~t~ai~---~~h~~G~---~~d~~~i~~~~~~~~  140 (363)
T PF01041_consen   71 PAYTFPATASAILWAGAEPVFVDID-PETLNIDPEALEKAITP---KTKAIL---VVHLFGN---PADMDAIRAIARKHG  140 (363)
T ss_dssp             ESSS-THHHHHHHHTT-EEEEE-BE-TTTSSB-HHHHHHHHHT---TEEEEE---EE-GGGB------HHHHHHHHHHTT
T ss_pred             CCCcchHHHHHHHHhccEEEEEecc-CCcCCcCHHHHHHHhcc---CccEEE---EecCCCC---cccHHHHHHHHHHcC
Confidence            9999999999999999999999984 57899999999999986   666666   3366677   568899999999999


Q ss_pred             CcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHH
Q 015283          214 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       214 ~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                      ++||+|.+++....  ....     .....  .++.+.||  +|.+. .|. .|++  ++.++++.++++.
T Consensus       141 i~lIeD~a~a~g~~--~~g~-----~~G~~--gd~~~fSf~~~K~i~-~ge-GG~v--~~~~~~~~~~~~~  198 (363)
T PF01041_consen  141 IPLIEDAAQAFGAR--YKGR-----PVGSF--GDIAIFSFHPTKIIT-TGE-GGAV--VTNDPELAERARA  198 (363)
T ss_dssp             -EEEEE-TTTTT-E--ETTE-----ETTSS--SSEEEEESSTTSSS--SSS--EEE--EESTHHHHHHHHH
T ss_pred             CcEEEccccccCce--eCCE-----eccCC--CCceEecCCCCCCCc-CCC-CeeE--EecHHHHHHHhhh
Confidence            99999999554331  1110     11112  35556666  68885 454 2555  6778886666654

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.72  E-value=2e-15  Score=146.13  Aligned_cols=336  Identities=12%  Similarity=0.046  Sum_probs=187.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++....  ...|.+.....++.+.+++.....      .+.+.+  +++|
T Consensus        53 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG  122 (457)
T PRK05639         53 NVFIDFLAGAAAASTGYS--HPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIE------NPKVLF--GLSG  122 (457)
T ss_pred             CEEEECCcCHHhhccCCC--CHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCC------cCEEEE--eCch
Confidence            467888877532345655  5888988888875421  122333333345666666653211      257888  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCC--------C-----CccceeeecCCC--cc----cCh----
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR--------V-----PWSEYRYYDPKT--VG----LDF----  167 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g--------~-----~~~~v~~~~~~~--~~----~d~----  167 (410)
                      ++|++.+.++.+.+....+|+....+|.+.... +...+        .     .+..+|..+...  +.    .|.    
T Consensus       123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  202 (457)
T PRK05639        123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI  202 (457)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence            999999998887776667888888877665422 11111        0     122333211100  00    022    


Q ss_pred             ----hhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          168 ----EGMIADIKA---APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       168 ----~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                          +.+++.+..   .+++...+++...+...|...+ .+-++++.++|++||+++|+||++.+|+-.   ...+....
T Consensus       203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Grt---G~~~a~~~  279 (457)
T PRK05639        203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRT---GKWFASEW  279 (457)
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcC---chHHHHHh
Confidence                233443321   1345667776666777787654 555999999999999999999999877532   22333222


Q ss_pred             HhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH---HHhCChhhHHHH
Q 015283          240 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEW  316 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~  316 (410)
                      + +..+++++   ++|.++ .|+.+|+++.   ++++.+.    .......++. .+.++..++.   ..+.++      
T Consensus       280 ~-gv~PDiv~---~gK~l~-gG~pi~av~~---~~~i~~~----~~~~~~~T~~-g~p~~~aaa~a~l~~l~~~------  340 (457)
T PRK05639        280 F-EVKPDLII---FGKGVA-SGMGLSGVIG---RKELMDL----TSGSALLTPA-ANPVISAAAEATLEIIEEE------  340 (457)
T ss_pred             c-CCCCCEEE---echhhc-CCCcceeEEe---hHHHHhh----cCCCcccCCC-cCHHHHHHHHHHHHHHHHc------
Confidence            2 22335443   899998 6888888754   7775441    1111112232 2333333332   222222      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------CH----HHHHHhhhcCcEEEcCCC--
Q 015283          317 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NK----AQSDNMTNKWHVYMTKDG--  383 (410)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~ll~~~gi~v~~~g--  383 (410)
                           ...++.+++.++|.+.|+ ++....++.......|.+.-+.+       +.    .+...+++ +|+++.+.|  
T Consensus       341 -----~l~~~~~~~g~~l~~~L~-~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~g~~  413 (457)
T PRK05639        341 -----NLLKNALKVGEFIKKRLL-EMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFE-LGLILPSYGMF  413 (457)
T ss_pred             -----cHHHHHHHHHHHHHHHHH-HHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHh-CCeEEeecCCC
Confidence                 223444445555555555 43110111111222333322211       11    23445555 699997642  


Q ss_pred             ----eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          384 ----RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       384 ----Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                          ||..+. .|++++++++++|++++.+
T Consensus       414 ~~~lr~~Ppl~it~~~id~~~~~l~~~l~~  443 (457)
T PRK05639        414 GNVIRITPPLVITKEIAEKGLEIMERAIKD  443 (457)
T ss_pred             CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence                676443 5999999999999999865

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.72  E-value=6.8e-16  Score=132.69  Aligned_cols=325  Identities=13%  Similarity=0.093  Sum_probs=191.2

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-C-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-P-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ..+++||..+.|+....+|.+...-.+++.++-......++- . ..-+..|...||++ +++      ++-|+.   ++
T Consensus        66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf-h~r------ED~ily---ps  135 (417)
T KOG1359|consen   66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF-HGR------EDTILY---PS  135 (417)
T ss_pred             ccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH-hCC------CceEEe---cc
Confidence            357899999998766665433333334444432221111111 1 11234666667776 444      455655   44


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh-cCCCCcEEEEeCCC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK-AAPGGSFILLHGCA  189 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~~~~ii~~~p  189 (410)
                      +-.|+.-+  +-+.+.|-|.|.-.+..+.+.++-++.+. +...          .|+-.++..+. .++.+-++++....
T Consensus       136 cfdANag~--feail~pedAvfSDeLNhASIIdGirLck-ry~h----------~dv~~l~~~l~~a~k~r~klv~TDg~  202 (417)
T KOG1359|consen  136 CFDANAGA--FEAILTPEDAVFSDELNHASIIDGIRLCK-RYRH----------VDVFDLEHCLISACKMRLKLVVTDGV  202 (417)
T ss_pred             ccccchHH--HHHhcChhhhhhccccccchhhhhhHHHh-hhcc----------chhHHHHHHHHHhhhheEEEEEecce
Confidence            55555444  22336788888888888877776655443 2222          34455543332 22346677776665


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH-HhhcCCcEEEEecccccccccCCCcceEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL-FATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      -.-.|-   ...+++|.+++++||.++++||++..+.++....   +... +.-+++.++..++++|++|  |---||  
T Consensus       203 FSMDGd---iaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGr---Gt~E~~~vm~~vdiinsTLgKAlG--ga~GGy--  272 (417)
T KOG1359|consen  203 FSMDGD---IAPLEEISQLAKKYGALLFIDECHATGFFGETGR---GTAEEFGVMGDVDIINSTLGKALG--GASGGY--  272 (417)
T ss_pred             eccCCC---cccHHHHHHHHHhcCcEEEEeecccceeecCCCC---ChHHHhCCCCcceehhhhhhhhhc--CCCCCC--
Confidence            656666   5667788888999999999999987666543221   2222 2335678899999999987  444589  


Q ss_pred             EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH--HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283          269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA--NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~  346 (410)
                       .++++.++.-++++-+.+.++....|...+..+.+  ..+..           ....++.+.+.+++++.+. ..|+  
T Consensus       273 -ttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s-----------~~~i~~~~a~~qrfr~~me-~aGf--  337 (417)
T KOG1359|consen  273 -TTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS-----------SKEIQSRQANTQRFREFME-AAGF--  337 (417)
T ss_pred             -ccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhh-----------HHHHHHHHHHHHHHHHHHH-hcCc--
Confidence             56699977777766666655433333323322221  22222           2334555666777777776 6663  


Q ss_pred             CcccccCCcce-eeecCC---CHHHHHHhhhcCcEEEc-------CCC----eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          347 DWSFILRQIGM-FSFTGL---NKAQSDNMTNKWHVYMT-------KDG----RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       347 ~~~~~~~~~~~-~~~~~~---~~~~~~~ll~~~gi~v~-------~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                        .+....-.+ -+++|.   .....+.+|+ .||+|.       |.|    |+.++. .++++++++++++.++.+-
T Consensus       338 --tIsg~~hPI~pv~lGda~lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~  412 (417)
T KOG1359|consen  338 --TISGASHPICPVMLGDARLASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF  412 (417)
T ss_pred             --eecCCCCCccceecccHHHHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence              333211111 134443   3456788888 499873       334    555543 4999999999999998654

>PRK07482 hypothetical protein; Provisional

Probab=99.72  E-value=5.2e-15  Score=143.59  Aligned_cols=340  Identities=14%  Similarity=0.078  Sum_probs=188.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|..-...|+.  +|.+.+++.++++... .+.+  .+.....++.+.+++.....      .+.+.+  +++
T Consensus        50 ~~ylD~~sg~~~~~lGh~--~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~s  119 (461)
T PRK07482         50 RRYIDAFAGLYCVNVGYG--RTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAG------MSKVYY--GLS  119 (461)
T ss_pred             CEEEEcccchhhhcCCCC--CHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCc
Confidence            567888888653455654  5889999888876521 1111  12222344555555543211      367888  999


Q ss_pred             hhhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhhhhh-hC---------CC---CccceeeecCCCc--------
Q 015283          111 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DA---------RV---PWSEYRYYDPKTV--------  163 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~~~~-~~---------g~---~~~~v~~~~~~~~--------  163 (410)
                      |++|++.+.++.+.+.     + ..+|+....+|.+...... ..         +.   .+..++.......        
T Consensus       120 GSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  199 (461)
T PRK07482        120 GSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEE  199 (461)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHH
Confidence            9999999988886542     2 2578888887766432111 11         10   1111211100000        


Q ss_pred             ---ccChhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          164 ---GLDFEGMIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       164 ---~~d~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                         ..+++.+++.+.+ .++...++++...+...|... +..-+++|.++|++||+++|.||++.+|+-.   ...+...
T Consensus       200 ~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRt---G~~~a~~  276 (461)
T PRK07482        200 QFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRL---GSMFGSD  276 (461)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcC---cchhhHH
Confidence               0135667777743 234566666666666667775 4556999999999999999999999998632   2333333


Q ss_pred             HHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHH---HHhCCh
Q 015283          239 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVA---NVVGNP  310 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~---~~l~~~  310 (410)
                      . .+..++++   .++|.++ .|. .+|.+++   .+++.+.+.....   . ....++ +...++..++.   ..++++
T Consensus       277 ~-~gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~Aaa~a~L~~~~~~  347 (461)
T PRK07482        277 H-YGIEPDLI---TVAKGLT-SAYAPLSGSIV---GEKVWDVLEQGSDEHGAIGHGWTY-SGHPICAAAALANLDILERE  347 (461)
T ss_pred             h-cCCCCCEE---EEccccc-cCccccceeee---cHHHHHHHhcccccCCccccCCCC-CcCHHHHHHHHHHHHHHHhC
Confidence            2 23334555   4799997 574 7888644   6665444432100   0 111222 23333334443   333333


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhhc
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTNK  374 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~~  374 (410)
                      +           ..++.++..+++.+.|+ ++-...++.......|.+.-+.+          +      ..+...+++ 
T Consensus       348 ~-----------l~~~~~~~g~~l~~~L~-~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-  414 (461)
T PRK07482        348 N-----------LVGNAAEVGAYFRARLR-AAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALE-  414 (461)
T ss_pred             C-----------HHHHHHHHHHHHHHHHH-HHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHH-
Confidence            2           23344555555555554 33111111111222333322211          1      123445555 


Q ss_pred             CcEEEcCC--C---eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283          375 WHVYMTKD--G---RISLA-GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       375 ~gi~v~~~--g---Ris~~-~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +||++.+.  +   |+..+ .+|++++++++++|.+++.+
T Consensus       415 ~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~  454 (461)
T PRK07482        415 RGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDE  454 (461)
T ss_pred             CCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            69998543  4   66533 35999999999999999865

>PRK05965 hypothetical protein; Provisional

Probab=99.71  E-value=5.1e-15  Score=143.62  Aligned_cols=340  Identities=12%  Similarity=0.063  Sum_probs=192.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCcc-C-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKE-Y-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~-y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|..-...|+.  +|++.+++.+++... +... | .+.....+|.+.+++.....      .+.+.+  +++
T Consensus        46 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~s  115 (459)
T PRK05965         46 HQLLDAFAGLWCVNVGYG--QESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGS------LNHVYF--TLG  115 (459)
T ss_pred             CEEEECcccHHhccCCCC--CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCC------cCEEEE--eCC
Confidence            468898877543344554  588999988887542 1111 1 11222335555555553211      367888  999


Q ss_pred             hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhh-hh---------CCC---Cccceeeec--CCCcccC---
Q 015283          111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIF-ND---------ARV---PWSEYRYYD--PKTVGLD---  166 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~-~~---------~g~---~~~~v~~~~--~~~~~~d---  166 (410)
                      |++|++.+.++.+.+.     +| .+|+..+.+|.+..... ..         .+.   .+..++...  ...+..|   
T Consensus       116 GSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (459)
T PRK05965        116 GSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQA  195 (459)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHH
Confidence            9999999998877652     22 57888888887654211 11         111   111222110  0001112   


Q ss_pred             -----hhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          167 -----FEGMIADIKAAP-GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       167 -----~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                           ++.+++.+.+.. +....+++...+...|... |..-++++.++|++||+++|.||+..+|+-.   ...+....
T Consensus       196 ~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRt---G~~~a~~~  272 (459)
T PRK05965        196 IIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRT---GPLFACEA  272 (459)
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccC---chhhhHhh
Confidence                 246677776432 4556666666677778765 5555999999999999999999999998732   23333332


Q ss_pred             HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHH---HHHhCChh
Q 015283          240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIV---ANVVGNPA  311 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a---~~~l~~~~  311 (410)
                      + +..++++   .++|.++ .| +.+|.+++   ++++.+.+.....   . ...+++. ...++..++   ..+++++ 
T Consensus       273 ~-gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa~a~L~~l~~~-  342 (459)
T PRK05965        273 E-GVVPDLM---TVAKGLT-SGYVPMGAVLM---SDHVYQGIADGAGAAAPVGHGYTYS-AHPVSAAVGLEVLRLYHEG-  342 (459)
T ss_pred             c-CCCCCeE---Eechhhc-cCCcceeEEEE---cHHHHHHHhccccccccccccCCCC-CCHHHHHHHHHHHHHHHhc-
Confidence            2 2334555   5799998 68 48999755   7776555432110   0 1222333 333333333   3333333 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhhcC
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTNKW  375 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~~~  375 (410)
                                ...++.++..+++.+.|+ ++.. .++.......|.+.-+.+          +      ..+..++++ +
T Consensus       343 ----------~l~~~~~~~g~~l~~~l~-~l~~-~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~  409 (459)
T PRK05965        343 ----------GLLANGQKAGPRFAAGLD-ALRA-HPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYA-N  409 (459)
T ss_pred             ----------cHHHHHHHHHHHHHHHHH-hhcc-CCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHh-C
Confidence                      233455566666666665 5421 111111223333322111          0      112344454 6


Q ss_pred             cEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          376 HVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       376 gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ||++.+.|    |+..+ .++++++++++++|.+++.++
T Consensus       410 Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~  448 (459)
T PRK05965        410 GLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDV  448 (459)
T ss_pred             CeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence            99998765    55533 249999999999999998653

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.71  E-value=4.1e-15  Score=144.15  Aligned_cols=328  Identities=16%  Similarity=0.141  Sum_probs=183.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc------CcCCcccHHHHHH----HHHHhcCCCCCcccCCce
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNKV----TAELLFGADNSVLKEQRV  103 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~a----ia~~~~~~~~~~~~~~~i  103 (410)
                      ..-|+|-.+++       ++++.+++++...+...+..+      |....-++++.+.    .++.+...      .+.+
T Consensus        34 ~~~l~liasen-------~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~------~~~~  100 (475)
T PLN03226         34 WKGLELIASEN-------FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD------PEKW  100 (475)
T ss_pred             HcCeeEecCCc-------cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC------ccee
Confidence            35688887764       237889998877662222122      2223333444331    22222222      2333


Q ss_pred             -EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCC---CCcchhhhhhh---CCCCcc----ceeeecCCCcccChhhHHH
Q 015283          104 -ATVQGLSGTGSLRLAAALIERYFPGAKVLISSP---TWGNHKNIFND---ARVPWS----EYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus       104 -~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p---~y~~~~~~~~~---~g~~~~----~v~~~~~~~~~~d~~~l~~  172 (410)
                       +-++.++|+.|+..+  +.+.+.|||+|+..+.   +|..+......   .+....    .+.+ +.+++.+|++++++
T Consensus       101 ~~nv~~~SG~~AN~av--~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d~Le~  177 (475)
T PLN03226        101 GVNVQPLSGSPANFAV--YTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYDKLEK  177 (475)
T ss_pred             EEecCcCchHHHHHHH--HHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHHHHHH
Confidence             224557888888887  5566889999998553   33333222211   111111    2333 23567799999999


Q ss_pred             HHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283          173 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS  252 (410)
Q Consensus       173 ~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  252 (410)
                      .+.+.  +++++++. .+ .+|...   ++++|.++|+++|+++++|+++..-... .+....+      ....+++++|
T Consensus       178 ~l~~~--~pklIv~~-~S-~~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~-~~~~~~p------~~~~Div~~t  243 (475)
T PLN03226        178 KAMLF--RPKLIIAG-AS-AYPRDW---DYARMRKIADKVGALLMCDMAHISGLVA-AQEAASP------FEYCDVVTTT  243 (475)
T ss_pred             HHhhc--CCeEEEEe-cC-cCCCcc---CHHHHHHHHHHcCCEEEEEchhhhCccc-CCCCCCC------CCCCeEEEec
Confidence            98753  34444432 22 367744   4557778899999999999996433222 1111111      1135688999


Q ss_pred             ccccc-cccCCCcceEEEEeCCchhHH----------HHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHH
Q 015283          253 YSKNL-GLYAERIGAMNVVCSSSDLAA----------RVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEM  320 (410)
Q Consensus       253 ~sK~~-~~~G~r~G~l~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~  320 (410)
                      ++|++ |+.|   |++++   +++..+          .+...........+.+.+...+.++ ...++.-     .....
T Consensus       244 ~hK~L~GP~G---g~I~~---~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i-----~~~~~  312 (475)
T PLN03226        244 THKSLRGPRG---GMIFF---RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA-----MTPEF  312 (475)
T ss_pred             CcccccCCCc---eEEEE---chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH-----hCcCH
Confidence            99998 5444   66533   544321          1111122111112222222222222 2222210     01123


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCc-ceeeec-----CCCHHHHHHhhhcCcEEEcCC------------
Q 015283          321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI-GMFSFT-----GLNKAQSDNMTNKWHVYMTKD------------  382 (410)
Q Consensus       321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~ll~~~gi~v~~~------------  382 (410)
                      ++++++..++.++|.+.|. +.|+    .+..+.. ...+++     +++...+.+.|++.||.+..+            
T Consensus       313 ~~~~~~~~~na~~L~~~L~-~~G~----~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~  387 (475)
T PLN03226        313 KAYQKQVKANAAALANRLM-SKGY----KLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPG  387 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHH-hCCC----EEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCC
Confidence            5778899999999999998 8773    4443211 222333     345667777778789988532            


Q ss_pred             C-eE-----EecCCCcccHHHHHHHHHHHhh
Q 015283          383 G-RI-----SLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       383 g-Ri-----s~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      | |+     +-.++++++++++++.|.++++
T Consensus       388 giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~  418 (475)
T PLN03226        388 GVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT  418 (475)
T ss_pred             CcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence            3 55     3335688999999999999886

>PRK07678 aminotransferase; Validated

Probab=99.71  E-value=4.9e-15  Score=143.54  Aligned_cols=336  Identities=11%  Similarity=0.059  Sum_probs=186.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-Cc-cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~-~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++.... .. .| +.....++.+.+++.+..       .+.+.+  +++|
T Consensus        47 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~-~~~~~~~lae~l~~~~~~-------~~~v~f--~~sG  114 (451)
T PRK07678         47 NRYLDGMSGLWCVNVGYG--RKELAEAAYEQLKTLSYFPLTQ-SHEPAIKLAEKLNEWLGG-------EYVIFF--SNSG  114 (451)
T ss_pred             CEEEEccccHHhhcCCCC--CHHHHHHHHHHHHhcCcccccc-CCHHHHHHHHHHHHhCCC-------CCEEEE--eCCc
Confidence            467888877542344554  5888888888775421 11 12 222334566666655311       247888  9999


Q ss_pred             hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCC--cc-----c
Q 015283          112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT--VG-----L  165 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~--~~-----~  165 (410)
                      ++|++.+.++.+.+.     +| .+|+....+|.+...... ..|.            .+..++..+...  +.     .
T Consensus       115 seA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (451)
T PRK07678        115 SEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIY  194 (451)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHH
Confidence            999999988887653     23 578888887766543221 1111            112222110000  00     1


Q ss_pred             C---hhhHHHHHh-cCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          166 D---FEGMIADIK-AAPGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       166 d---~~~l~~~i~-~~~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                      |   ++.+++.+. ..++....+++...+.-.|.+.+ .+-++++.++|++||+++|.||++.+|+-.   ...+.... 
T Consensus       195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~~~~~-  270 (451)
T PRK07678        195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRT---GKAFGFMN-  270 (451)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcC---chhHHHHh-
Confidence            1   223455564 22345666666666666677754 455999999999999999999999898732   23334333 


Q ss_pred             hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---hhccCcccCCChhHHHHHH---HHhCChhhH
Q 015283          241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---RLARPMYSNPPVHGARIVA---NVVGNPALF  313 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~---~~l~~~~~~  313 (410)
                      .+..++++   +++|.+| .| +.+|.+++   ++++.+.+.....   ....++++ .+.++..++.   ..+.++   
T Consensus       271 ~gv~PDiv---t~gK~lg-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~h~~T~~-gnp~~~aaa~a~l~~l~~~---  339 (451)
T PRK07678        271 YGVKPDII---TMAKGIT-SAYLPLSATAV---KKEIYEAFKGKGEYEHFRHVNTFG-GNPAACALALKNLEIMENE---  339 (451)
T ss_pred             cCCCCCEE---Eeecccc-cCCcceeEEEE---cHHHHHHHhccCcccccccCCCCC-cCHHHHHHHHHHHHHHHhC---
Confidence            22234544   6799998 46 68999755   7776555432110   01223333 3333333333   333322   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceeeecCC----------CH----HHHHHhhhcCc
Q 015283          314 DEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL----------NK----AQSDNMTNKWH  376 (410)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~ll~~~g  376 (410)
                              ...++.++..++|.+.|++   +.+.   +...... |.+.-+.+          +.    .+...+++ +|
T Consensus       340 --------~~~~~~~~~g~~l~~~l~~~~~~~~~---v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~-~G  406 (451)
T PRK07678        340 --------NLIERSAQLGELLLEQLKEELGEHPL---VGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACKE-KG  406 (451)
T ss_pred             --------CHHHHHHHHHHHHHHHHHHHHhcCCC---EEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHHH-CC
Confidence                    2233444444455544430   2221   1112222 33221111          11    22345555 69


Q ss_pred             EEEcCC--------C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          377 VYMTKD--------G--RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       377 i~v~~~--------g--Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |++.+.        .  ||+.+. +|+++++++++++.+++.++
T Consensus       407 v~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        407 LIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI  450 (451)
T ss_pred             cEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence            998652        2  666442 49999999999999999875

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.71  E-value=6.1e-15  Score=142.68  Aligned_cols=340  Identities=10%  Similarity=-0.004  Sum_probs=192.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCcc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++... +... ..+.....++.+.+++.....      .+.+.+  +++|
T Consensus        54 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~sG  123 (453)
T PRK06943         54 RRYLDAISSWWVNLFGHA--NPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGT------LGHAFF--ASDG  123 (453)
T ss_pred             CEEEEcchHHHHhcCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCC
Confidence            467888777542344655  588888888877542 1111 112223334555555542111      257888  9999


Q ss_pred             hhHHHHHHHHHHHh-----CC-CCEEEEcCCCCcchhh-hhhhCCC------------CccceeeecCCC--c-------
Q 015283          112 TGSLRLAAALIERY-----FP-GAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKT--V-------  163 (410)
Q Consensus       112 t~a~~~~~~~~~~~-----~~-gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~~--~-------  163 (410)
                      ++|++.+.++.+.+     .+ ..+|+....+|.+... .+...|.            .+..++..+...  +       
T Consensus       124 seAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  203 (453)
T PRK06943        124 ASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADV  203 (453)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHH
Confidence            99999998877543     12 3678888888866532 1111110            122222211100  0       


Q ss_pred             -ccChhhHHHHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          164 -GLDFEGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       164 -~~d~~~l~~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                       .-+++.+++.+...++...++++.. .+...|... +.+-++++.++|++||+++|.||++.+|+-.   ...+....+
T Consensus       204 ~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRt---G~~fa~~~~  280 (453)
T PRK06943        204 AARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRT---GTFFACEQA  280 (453)
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCC---cchhHHHhC
Confidence             0134667777765445666666555 367778755 5555999999999999999999999998632   233433332


Q ss_pred             hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH---HhhccCcccCCChhHHHHHH---HHhCChhhH
Q 015283          241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KRLARPMYSNPPVHGARIVA---NVVGNPALF  313 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~  313 (410)
                       +..++++   .++|.++ .| +.+|.+++   ++++.+.+....   .....+++. ...++..++.   ..++++   
T Consensus       281 -gv~PDiv---t~gKgl~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~i~~~---  348 (453)
T PRK06943        281 -GVWPDFL---CLSKGIS-GGYLPLSLVLS---RDAIFAAFYDDDVTRGFLHSHSYT-GNPLACRAALATLDLFAED---  348 (453)
T ss_pred             -CCCCCeE---eeehhhc-cCcccceEEEE---cHHHHHhhcccCccCCccCCCCCC-CCHHHHHHHHHHHHHHHhc---
Confidence             3334566   4699998 68 58999755   777555443210   001222332 3333333333   333332   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C------HHHHHHhhhcCcEEEcCCC
Q 015283          314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N------KAQSDNMTNKWHVYMTKDG  383 (410)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~------~~~~~~ll~~~gi~v~~~g  383 (410)
                              ...++.++..+++.+.|+ ++.....+..+ ...|.+.-+.+    +      ..+..++++ +||++.+.|
T Consensus       349 --------~l~~~~~~~G~~l~~~L~-~l~~~~~v~~v-rG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~-~Gll~~~~g  417 (453)
T PRK06943        349 --------DVLARNARKSARLRAALA-PLAAHPQVRHL-RQRGTIFAFDVALDGDAARTFSRRFFEAALE-RELLLRPIG  417 (453)
T ss_pred             --------CHHHHHHHHHHHHHHHHH-HHhcCCCEEeE-eccccEEEEEEccCCCcchHHHHHHHHHHHH-CCcEEEecC
Confidence                    233455555666666665 44210012222 23333322221    1      123445555 699998865


Q ss_pred             ---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          384 ---RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 ---Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                         ||+.+ .+|++++++++++|++++.++
T Consensus       418 ~~l~~~Ppl~it~~eid~~~~~l~~al~~~  447 (453)
T PRK06943        418 TTVYLMPPYVLDDDEIAWLAERTRATLDAT  447 (453)
T ss_pred             CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence               77733 249999999999999998753

>PRK07046 aminotransferase; Validated

Probab=99.71  E-value=6.8e-15  Score=142.20  Aligned_cols=331  Identities=15%  Similarity=0.076  Sum_probs=186.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.......+ +.....++.|.+++.+    +    .+.+.|  +++||+
T Consensus        75 ~~yiD~~~g~g~~~lGh~--~p~i~~Av~~q~~~~~~~~~-~~~~~~~lAe~l~~~~----~----~~~v~F--~nSGtE  141 (453)
T PRK07046         75 HRYDDFCLGDTGAMFGHS--PAPVARALAEQARRGLTTML-PSEDAAWVGEELARRF----G----LPYWQV--ATTATD  141 (453)
T ss_pred             CEEEEecccccccccCCC--CHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHh----C----CCEEEE--ECCHHH
Confidence            467888766532344554  58899998888765432223 3333345555555553    1    367889  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-h--CCCC-----cccee--eec---CCCcccChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D--ARVP-----WSEYR--YYD---PKTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~--~g~~-----~~~v~--~~~---~~~~~~d~~~l~~~i~~~~~~  180 (410)
                      |.+.+.++.+.+...++|+..+.+|.++..... .  .+..     ...++  ..+   .-.+ .|++.+++.+..  ++
T Consensus       142 A~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~--~~  218 (453)
T PRK07046        142 ANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALAD--GD  218 (453)
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCC--CC
Confidence            999999988887766889998988877632111 1  1100     00000  000   0011 278888888853  34


Q ss_pred             cEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      ...+++...+.-.|.+.+ .+-++++.++|++||+++|.||+.. |..+ ...    .....+..++++   +++|.+| 
T Consensus       219 vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g-~Gg----~~~~~gv~PDi~---t~gK~lg-  288 (453)
T PRK07046        219 VAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSG-PGG----YTRAHGLEPDFL---VVGKPIA-  288 (453)
T ss_pred             eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccC-Ccc----hhHHhCCCccce---eehhhhc-
Confidence            556665555555566554 4559999999999999999999976 4322 111    111122233444   5899998 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHH-----h-hccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLK-----R-LARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~-----~-~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      .|+.+|.+.+   ++++.+.+.....     . ....++. +|...+...+ ...+.++++           .+++++..
T Consensus       289 gG~Pi~av~g---~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~-----------~~~~~~~g  354 (453)
T PRK07046        289 GGVPCAVYGF---SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAA-----------YAHMLALA  354 (453)
T ss_pred             CCCcceeeee---hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccH-----------HHHHHHHH
Confidence            6899998654   7776555432110     0 1112332 3333322222 344443322           23333333


Q ss_pred             HHHHHHhh---hccCCCCCcccccCCccee-eec-C------------CCH----HHHHHhhhcCcEEEcCCC---eEEe
Q 015283          332 QKLFDSLS---AKDKSGKDWSFILRQIGMF-SFT-G------------LNK----AQSDNMTNKWHVYMTKDG---RISL  387 (410)
Q Consensus       332 ~~l~~~l~---~~~g~~~~~~~~~~~~~~~-~~~-~------------~~~----~~~~~ll~~~gi~v~~~g---Ris~  387 (410)
                      ++|.+.|+   ++.++.  +. ....+.++ +.. .            .+.    .+...+++ +||++.|.+   +++.
T Consensus       355 ~~l~~~L~~l~~~~~~~--~~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~~~~~~p  430 (453)
T PRK07046        355 ARLAAGLRAVIARHGLP--WH-VTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGVLITPFHNMMLVCP  430 (453)
T ss_pred             HHHHHHHHHHHHhCCCC--eE-EEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCCEEecccCcEEEeC
Confidence            33333333   033321  11 11222222 111 1            011    12345555 699998865   6776


Q ss_pred             cCCCcccHHHHHHHHHHHhhhc
Q 015283          388 AGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       388 ~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      + .++++++++++++.++++++
T Consensus       431 ~-~t~~did~~~~~~~~~l~~~  451 (453)
T PRK07046        431 A-TTAADVDRLVAAFDACLGEL  451 (453)
T ss_pred             C-CCHHHHHHHHHHHHHHHHHH
Confidence            5 59999999999999998764

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.70  E-value=6.4e-15  Score=141.73  Aligned_cols=157  Identities=18%  Similarity=0.114  Sum_probs=117.1

Q ss_pred             cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCc
Q 015283           77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPW  152 (410)
Q Consensus        77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~  152 (410)
                      ....+|++.++++....        ..++  +++|++|+.++  +...+.+||+|+++.+.|.+...    .+...|.++
T Consensus        63 p~~~~le~~lA~l~g~~--------~al~--~~SG~~Ai~~a--l~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v  130 (427)
T PRK05994         63 PTNAVLEERVAALEGGT--------AALA--VASGHAAQFLV--FHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQV  130 (427)
T ss_pred             ccHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEE
Confidence            34578899999995332        3444  69999999987  34447899999999999986543    356778888


Q ss_pred             cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283          153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN  232 (410)
Q Consensus       153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~  232 (410)
                      +.++.       .|++.+++.+++   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|......    
T Consensus       131 ~~vd~-------~d~~~l~~ai~~---~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~----  193 (427)
T PRK05994        131 RWADA-------DDPASFERAITP---RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLI----  193 (427)
T ss_pred             EEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence            77764       278889888864   6778888999999999775   667888899999999999997632211    


Q ss_pred             chhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      .  ++     ....++++.|++|.+|.+|-.+|.+++
T Consensus       194 ~--pl-----~~gaDivv~S~tK~lgg~~~~~gG~v~  223 (427)
T PRK05994        194 R--PI-----EHGADIVVHSLTKFLGGHGNSMGGIIV  223 (427)
T ss_pred             C--cc-----ccCCcEEEEcCccccCCCCCcEEEEEE
Confidence            1  11     123568899999999877766777643

>PRK07481 hypothetical protein; Provisional

Probab=99.70  E-value=7.5e-15  Score=142.14  Aligned_cols=342  Identities=15%  Similarity=0.106  Sum_probs=187.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc-cC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-EY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|.--...|+.  .|.+.+++.+++...... .+  .......++.+.+++.+...     ..+.+.+  +++
T Consensus        42 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~-----~~~~v~f--~~s  112 (449)
T PRK07481         42 KKLLDGVGGLWNVNVGHN--REEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPE-----GMRRVFF--SSG  112 (449)
T ss_pred             CEEEECchhHHhhcCCCC--CHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCC-----CCCEEEE--cCc
Confidence            467888776442345554  588889888887542111 11  12222334555555543110     1357888  999


Q ss_pred             hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCC------------CccceeeecCC--Ccc-cChh
Q 015283          111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPK--TVG-LDFE  168 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~--~~~-~d~~  168 (410)
                      |++|++.+.++.+.+.     +| .+|+...-+|.+... .+...+.            .+..++.....  .++ .|.+
T Consensus       113 GsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~  192 (449)
T PRK07481        113 GSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPE  192 (449)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHH
Confidence            9999999988887653     33 578888887766532 1111110            11112211000  011 1333


Q ss_pred             h--------HHHHHh-cCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          169 G--------MIADIK-AAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       169 ~--------l~~~i~-~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                      .        +++.+. ..++...++++...+.-.|... +.+-++++.++|++||+++|.||++.+|+-.   ...+...
T Consensus       193 ~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~a~~  269 (449)
T PRK07481        193 ELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRT---GSWFGSR  269 (449)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcC---chhhHhh
Confidence            3        333343 2234566666666666677765 4555999999999999999999999988632   2233332


Q ss_pred             HHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHHH---HhCCh
Q 015283          239 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVAN---VVGNP  310 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~---~l~~~  310 (410)
                      . .+..++++   .++|.++ .| +.+|.+++   ++++.+.+.....   . ....++. ...++..++..   .+.++
T Consensus       270 ~-~gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~L~~l~~~  340 (449)
T PRK07481        270 G-WGVKPDIM---CLAKGIT-SGYVPLGATMV---NARIADAFEANADFGGAIMHGYTYS-GHPVACAAALATLDIVVRE  340 (449)
T ss_pred             h-cCCCCCEE---EEeeccc-CCCcCceEEEE---cHHHHHHHhccCccccccccCCCCC-CCHHHHHHHHHHHHHHHhh
Confidence            2 22234554   5699997 57 58898755   6775554432110   0 1122332 33333333333   33322


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C--H----HHHHHhhhc
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N--K----AQSDNMTNK  374 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~--~----~~~~~ll~~  374 (410)
                                 ...++.++..+++.+.|+ ++-...++.......|.+.-+.+          +  .    .+..++++ 
T Consensus       341 -----------~l~~~~~~~g~~l~~~L~-~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~-  407 (449)
T PRK07481        341 -----------DLPANAAKRGAYLLEGLQ-PLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARE-  407 (449)
T ss_pred             -----------hHHHHHHHHHHHHHHHHH-HHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHh-
Confidence                       233445555555555555 43211111111122233322211          1  1    12344444 


Q ss_pred             CcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          375 WHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       375 ~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .||++.+.|   ||+.+. +|++++++++++|.+++.++
T Consensus       408 ~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~  446 (449)
T PRK07481        408 NGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV  446 (449)
T ss_pred             CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            699998876   777443 49999999999999998764

>PLN02271 serine hydroxymethyltransferase

Probab=99.70  E-value=1.5e-14  Score=138.34  Aligned_cols=332  Identities=15%  Similarity=0.143  Sum_probs=198.3

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc------CCcccHHHHHHHHHHhcCCCCCcccC--CceEEE
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKVTAELLFGADNSVLKE--QRVATV  106 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~aia~~~~~~~~~~~~~--~~i~~~  106 (410)
                      .-|+|-..++       ++++.+++++...+.+.+..+|+      ....++++.....+.....++.+...  -||-  
T Consensus       149 ~~l~LIASEN-------~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQ--  219 (586)
T PLN02271        149 KGIELIASEN-------FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQ--  219 (586)
T ss_pred             cCeeeccccc-------cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCccccccccee--
Confidence            4577776654       23789998876655433223332      22223344333333333333322111  2343  


Q ss_pred             ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh---------hhCCCCccceeee-cCCCcccChhhHHHHHhc
Q 015283          107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---------NDARVPWSEYRYY-DPKTVGLDFEGMIADIKA  176 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~---------~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~  176 (410)
                       ..+|+.|+..+  +.+.+.|||+|+..+..++++....         ...|..+..+++. +.+++.+|++++++....
T Consensus       220 -p~SGs~AN~aV--~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~  296 (586)
T PLN02271        220 -PYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD  296 (586)
T ss_pred             -eccHHHHHHHH--HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh
Confidence             47888888888  5556889999999998888775543         2334444444431 245677999999986544


Q ss_pred             CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283          177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN  256 (410)
Q Consensus       177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  256 (410)
                        .++++++++...+|  ..+   +++++.++|+++|+++++|.++..-... .+..+.+      ....+++.+|.+|+
T Consensus       297 --~rPKLII~g~Sayp--r~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa-~g~~~sP------~~~aDvvt~TTHKt  362 (586)
T PLN02271        297 --FRPKILICGGSSYP--REW---DYARFRQIADKCGAVLMCDMAHISGLVA-AKECVNP------FDYCDIVTSTTHKS  362 (586)
T ss_pred             --cCCeEEEECchhcc--CcC---CHHHHHHHHHHcCCEEEEECcccccccc-cCcCCCC------CcCCcEEEeCCccc
Confidence              47788887777777  333   5667777799999999999996532221 1110001      11367899999999


Q ss_pred             ccccCCCcceEEEEeCCchh----------------HHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHH
Q 015283          257 LGLYAERIGAMNVVCSSSDL----------------AARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAE  319 (410)
Q Consensus       257 ~~~~G~r~G~l~~~~~~~~~----------------~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~  319 (410)
                      +  .|-|-|.++.   +++.                -..+.+.+....++... ++......+.+..+..-     ...+
T Consensus       363 L--rGPrGG~I~~---r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea-----~~~e  432 (586)
T PLN02271        363 L--RGPRGGIIFY---RKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQV-----ATPE  432 (586)
T ss_pred             C--CCCCceEEEe---cccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHH-----hChH
Confidence            7  3555577643   3221                01233444444444222 33333222222222211     1223


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee-eecCC-----CHHHHHHhhhcCcEEEcC------------
Q 015283          320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGL-----NKAQSDNMTNKWHVYMTK------------  381 (410)
Q Consensus       320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~ll~~~gi~v~~------------  381 (410)
                      ++++.+++.++.+.|.+.|. +.|+    .+....+-.+ +++++     +...+++.|++.||.+..            
T Consensus       433 fk~Ya~QVv~NAkaLA~~L~-~~G~----~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~p  507 (586)
T PLN02271        433 YKAYMQQVKKNAQALASALL-RRKC----RLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISP  507 (586)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HCCC----eEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCC
Confidence            36888889999999999998 8883    4443333333 55544     577899999999998832            


Q ss_pred             CC-eEEec-----CCCcccHHHHHHHHHHHhh
Q 015283          382 DG-RISLA-----GLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       382 ~g-Ris~~-----~~~~~~i~~~~~~l~~~l~  407 (410)
                      +| ||...     ++.+++++++.+.|.++++
T Consensus       508 sGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        508 GGVRIGTPAMTSRGCLESDFETIADFLLRAAQ  539 (586)
T ss_pred             CcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence            34 88533     4578999999999988875

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.70  E-value=6.5e-15  Score=142.90  Aligned_cols=340  Identities=9%  Similarity=0.044  Sum_probs=192.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCcc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|......|+.  +|.+.+++.+++..- +... +.......++.+.+++.+...      .+.+.+  +++|
T Consensus        56 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG  125 (460)
T PRK06916         56 NEYYDGVSSIWLNVHGHQ--VPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEG------LKKVFY--SDSG  125 (460)
T ss_pred             CEEEEcchhHHHhhcCCC--CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCc
Confidence            467888776542344554  588888888887541 1111 112333345666666653221      257888  9999


Q ss_pred             hhHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchhh-hhhhCCC------------CccceeeecCC--Cc-------
Q 015283          112 TGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPK--TV-------  163 (410)
Q Consensus       112 t~a~~~~~~~~~~~-----~~g-d~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~--~~-------  163 (410)
                      ++|++.+.++.+.+     .+| .+|+..+.+|.+... .+...|.            .+..+|..+..  .+       
T Consensus       126 seAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~  205 (460)
T PRK06916        126 ATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEI  205 (460)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence            99999998888764     233 688888887766432 2221111            11222221000  00       


Q ss_pred             -ccChhhHHHHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          164 -GLDFEGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       164 -~~d~~~l~~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                       .-+++.+++.+...++...++++.. ++...|... +.+-++++.++|++||+++|.||++.+|+-.   ...+....+
T Consensus       206 ~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRt---G~~~a~~~~  282 (460)
T PRK06916        206 VKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRT---GKMFACEHE  282 (460)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcC---chhhHHHhc
Confidence             0135566777765445666666555 466678765 6666999999999999999999999887532   233333222


Q ss_pred             hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH---Hh-hccCcccCCChhHHHHHHHH---hCChhh
Q 015283          241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KR-LARPMYSNPPVHGARIVANV---VGNPAL  312 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~a~~~---l~~~~~  312 (410)
                       +..++++   +++|.++ .| +.+|.+++   ++++.+.+....   .. ....++. .+.++..++...   ++++  
T Consensus       283 -gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~l~~l~~~--  351 (460)
T PRK06916        283 -NVTPDIM---TAGKGLT-GGYLPIAITVT---TDEIYNAFYGDYEEQKTFFHGHSYT-GNPLGCAVALANLELYEKT--  351 (460)
T ss_pred             -CCCCCee---eeehhhh-cCccccceeee---cHHHHHHhhccccccCccccCCCCC-CCHHHHHHHHHHHHHHHhc--
Confidence             2233544   5799998 67 58999755   777555443211   01 1122332 233333443333   3222  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C--------------HHHHHHhhhcCc
Q 015283          313 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N--------------KAQSDNMTNKWH  376 (410)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~ll~~~g  376 (410)
                               ...++++++.+++.+.|+ ++.. .+........|.+.-+.+  +              ..+...+++ +|
T Consensus       352 ---------~l~~~~~~~g~~l~~~l~-~l~~-~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~G  419 (460)
T PRK06916        352 ---------NLIEQVARKTEYVATQLE-DLFA-LKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRE-LG  419 (460)
T ss_pred             ---------cHHHHHHHHHHHHHHHHH-Hhhc-CCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHH-CC
Confidence                     234556666666666665 5421 111111122233321111  0              123445554 69


Q ss_pred             EEEcCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          377 VYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       377 i~v~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |.+.+.|   ||..+ .++++++++++++|.++++++
T Consensus       420 vl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~  456 (460)
T PRK06916        420 MLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDV  456 (460)
T ss_pred             eEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            9999865   66533 359999999999999998764

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.70  E-value=8.1e-15  Score=141.53  Aligned_cols=340  Identities=12%  Similarity=0.052  Sum_probs=188.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-...|+.  .|.+.+++.++++.- +...+ .+..-..++.+.+++.....      .+.+.+  +++|
T Consensus        46 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~------~~~v~f--~~sG  115 (442)
T PRK13360         46 RRVLDGTAGLWCVNAGHG--RPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG------LNHVFF--TNSG  115 (442)
T ss_pred             CEEEECchhHHHhccCCC--CHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCc
Confidence            467888776432234554  588888888877541 11111 11222235555555553211      357888  9999


Q ss_pred             hhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhh-hhhhC---------C---CCccceeeec--C-CCccc----
Q 015283          112 TGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKN-IFNDA---------R---VPWSEYRYYD--P-KTVGL----  165 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~-~~~~~---------g---~~~~~v~~~~--~-~~~~~----  165 (410)
                      ++|++.+.++.+.+.     + ..+|+....+|.+... .+...         +   ..+..+|...  . ..+..    
T Consensus       116 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  195 (442)
T PRK13360        116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPE  195 (442)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHH
Confidence            999999988877653     2 2578888888766532 11111         1   1122222210  0 00111    


Q ss_pred             ----ChhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          166 ----DFEGMIADIKAA-PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       166 ----d~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                          ..+.+++.+... +++..++++...+...|... +..-+++|.++|++||+++|+||++.+|+-.   ...+....
T Consensus       196 ~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Grt---G~~~a~~~  272 (442)
T PRK13360        196 HGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRL---GAPFAAQY  272 (442)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC---ccchhhhh
Confidence                145667777543 23456666666666677765 4555999999999999999999998888632   12222222


Q ss_pred             HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH----hhccCcccCCChhHHHHHHHH---hCChh
Q 015283          240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK----RLARPMYSNPPVHGARIVANV---VGNPA  311 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~a~~~---l~~~~  311 (410)
                       .+..++++   +++|.++ .| +.+|.+++   ++++.+.+...-.    .....++. .+.++..++...   +.++ 
T Consensus       273 -~gv~PDiv---t~gK~l~-gG~~P~gav~~---~~~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~l~~~-  342 (442)
T PRK13360        273 -FGVTPDLL---TCAKGLT-NGAIPMGAVFV---SSEIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDLYERE-  342 (442)
T ss_pred             -cCCCCcee---eeeeccc-cCccceEEEEE---cHHHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHHHHhC-
Confidence             12223433   7899997 45 67888644   7775554432100    01112232 333333333333   2222 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C---HHHHHHhhhcCcEEEcC
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N---KAQSDNMTNKWHVYMTK  381 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~ll~~~gi~v~~  381 (410)
                                ...++.+++.+++.+.|+ ++.....+..+ ...|.+.-+.+       .   .....++++ +||++.+
T Consensus       343 ----------~l~~~~~~~g~~l~~~l~-~l~~~~~v~~v-rG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~-~Gvl~~~  409 (442)
T PRK13360        343 ----------GLLTRAARLAPYWEDALH-SLRDAPHVIDI-RNLGLVGAVELAPRDGKPGKRAYEVFLKCFE-KGLMIRY  409 (442)
T ss_pred             ----------CHHHHHHHHHHHHHHHHH-HhhcCCCeeee-eccceEEEEEEecCCCCcchhHHHHHHHHHH-CCcEEEe
Confidence                      344566666666777666 54310001111 22233211111       1   133455555 6999987


Q ss_pred             CC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          382 DG---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       382 ~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+   ||+.+. .|++++++++++|.++++++
T Consensus       410 ~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~  441 (442)
T PRK13360        410 TGDILALSPPLIIEEAQIDELFDILAQALKET  441 (442)
T ss_pred             cCCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence            65   887443 49999999999999998764

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.70  E-value=3.7e-15  Score=143.00  Aligned_cols=342  Identities=10%  Similarity=0.041  Sum_probs=188.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc--CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++.......  +....-..++.+.+++....      ..+.+.+  +++|
T Consensus        43 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~------~~~~v~f--~~SG  112 (428)
T PRK07986         43 RRLVDGMSSWWAAIHGYN--HPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQ------PLECVFL--ADSG  112 (428)
T ss_pred             CEEEEcchhHHhhcCCCC--CHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCC------CcCEEEE--eCCc
Confidence            467888877532344554  5889999888875421111  11222233455555554321      1367888  9999


Q ss_pred             hhHHHHHHHHHHHh-----CCCCEEEEcCCCCcchhhh-hhhCCC-------------CccceeeecCC---Cc-ccChh
Q 015283          112 TGSLRLAAALIERY-----FPGAKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYDPK---TV-GLDFE  168 (410)
Q Consensus       112 t~a~~~~~~~~~~~-----~~gd~Vl~~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~~~---~~-~~d~~  168 (410)
                      ++|++.+.++.+.+     .+..+|+....+|.+.... +...+.             .+..++.....   .+ .-|++
T Consensus       113 sEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~  192 (428)
T PRK07986        113 SVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIA  192 (428)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHH
Confidence            99999998888765     2236888888888664321 111111             11112211000   00 12567


Q ss_pred             hHHHHHhcCCCCcEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          169 GMIADIKAAPGGSFILLHGCA-HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       169 ~l~~~i~~~~~~~~~ii~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      .+++.++..++...++++... +.-.|... ++..+++|.++|++||+++|+||++.+++..   ...+....+ +..++
T Consensus       193 ~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~Grt---G~~fa~~~~-gv~PD  268 (428)
T PRK07986        193 PFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRT---GKLFACEHA-GIAPD  268 (428)
T ss_pred             HHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccC---CCeeeeccc-CCCCC
Confidence            777778654445555555442 55556544 5677999999999999999999998777532   222222111 12234


Q ss_pred             EEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH-h-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK-R-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      ++   .++|.++ .| +.+|.+++   ++++.+.+...-. . ....++. .+.++..++...|+-  +    ++  +..
T Consensus       269 i~---t~gK~l~-gG~~p~~av~~---~~~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~~--i----~~--~~~  332 (428)
T PRK07986        269 IL---CLGKALT-GGTMTLSATLT---TREVAETISNGEAGCFMHGPTFM-GNPLACAVANASLSL--L----ES--GDW  332 (428)
T ss_pred             EE---Eechhhh-CCcccCcchhc---hHHHHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHHH--H----Hh--CCH
Confidence            44   5899997 67 57777543   7775555432100 0 1122333 333333443333221  0    00  123


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC---eEEec-CCCccc
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RISLA-GLSLAK  394 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g---Ris~~-~~~~~~  394 (410)
                      .++.+++.+++.+.|+ ++.....+..+ ...|.+.-+.+    .. .+...+++ +|+++.+.|   |+..+ .+|+++
T Consensus       333 ~~~~~~~g~~l~~~l~-~l~~~~~i~~v-Rg~Gl~~~ve~~~~~~~~~~~~~l~~-~Gl~~~~~g~~i~~~Ppl~it~~e  409 (428)
T PRK07986        333 QQQVAAIEAQLREELA-PLRDAPMVADV-RVLGAIGVVETTRPVNMAALQRFFVE-QGVWIRPFGKLIYLMPPYIILPEQ  409 (428)
T ss_pred             HHHHHHHHHHHHHHHH-HHhcCCCEEeE-eccceEEEEEeCCcccHHHHHHHHHH-CCcEEEecCCEEEEeCCCCCCHHH
Confidence            4556666666666666 54210001111 22343322222    12 33445554 699999876   66533 249999


Q ss_pred             HHHHHHHHHHHhhh
Q 015283          395 CEYLADAIIDSYHN  408 (410)
Q Consensus       395 i~~~~~~l~~~l~~  408 (410)
                      +++++++|.+++.+
T Consensus       410 i~~~~~~l~~~l~~  423 (428)
T PRK07986        410 LQRLTAAVNRAVQD  423 (428)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999864

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.70  E-value=1.2e-14  Score=139.71  Aligned_cols=339  Identities=12%  Similarity=0.049  Sum_probs=191.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CC-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.--...|+.  .|.+.+++.+++... +. ..+.......+|.+.+++.....      .+.+.+  +++|
T Consensus        44 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~sG  113 (429)
T PRK06173         44 RRLIDGMSSWWAALHGYN--HPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPS------LNKIFF--ADSG  113 (429)
T ss_pred             CEEEEccchHHhccCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC------cCEEEE--eCCc
Confidence            467888776532344554  488888888877542 11 11112334456666666654211      368899  9999


Q ss_pred             hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCC-------------CccceeeecCC---Cc-ccCh
Q 015283          112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV-------------PWSEYRYYDPK---TV-GLDF  167 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~-------------~~~~v~~~~~~---~~-~~d~  167 (410)
                      ++|++.+.++.+.+.     +| .+|+....+|.+... .+...|.             .+..+|.....   .+ .-++
T Consensus       114 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l  193 (429)
T PRK06173        114 SVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAI  193 (429)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHH
Confidence            999999988887652     33 578888887766421 1111110             11112211000   00 0135


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          168 EGMIADIKAAPGGSFILLHGCA-HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      +.+++.+...+++...+++... +...|.. ++.+-++++.++|++||+++|+||++.+++-.   ...+....+ +..+
T Consensus       194 ~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~Grt---G~~~a~~~~-gv~P  269 (429)
T PRK06173        194 EPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRT---GKLFALEHA-GVVP  269 (429)
T ss_pred             HHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcC---CcchHHHhc-CCCC
Confidence            6677777654455666666553 6777776 46666999999999999999999998776532   233322222 2223


Q ss_pred             cEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH-h-hccCcccCCChhHHHHHHHH---hCChhhHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK-R-LARPMYSNPPVHGARIVANV---VGNPALFDEWKAE  319 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~  319 (410)
                      +++   +++|.++ .| +.++.++.   ++++.+.+..... . ...+++. .+.++..++...   ++++         
T Consensus       270 Div---~~gK~l~-gG~~p~~a~~~---~~~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~i~~~---------  332 (429)
T PRK06173        270 DIM---CIGKALT-GGYLTLSATIT---TEAIAQTICSGEAKCFMHGPTFM-ANPLACAIAAESIRLLLES---------  332 (429)
T ss_pred             CEE---Eeehhhh-CCccccceEEe---cHHHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhC---------
Confidence            433   4899997 67 46777644   6675554431000 0 1112222 233333333322   2222         


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec--CC--CH-HHHHHhhhcCcEEEcCCC---eEEecC-C
Q 015283          320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL--NK-AQSDNMTNKWHVYMTKDG---RISLAG-L  390 (410)
Q Consensus       320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~--~~-~~~~~ll~~~gi~v~~~g---Ris~~~-~  390 (410)
                        ..+++++++.+++.+.|+ ++.. .+........|.+.-+  +.  .. .....+++ .||++.+.|   ||..+- +
T Consensus       333 --~~~~~~~~~g~~l~~~L~-~~~~-~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e-~Gi~v~~~g~~l~~~Ppl~i  407 (429)
T PRK06173        333 --PWQQNIQRIEAQLKQELA-PAAE-FDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVE-HGIWVRPFGKLVYIMPPFII  407 (429)
T ss_pred             --CHHHHHHHHHHHHHHHHH-Hhhc-CCCeeeeeccceEEEEEeCCcccHHHHHHHHHH-CCeEEEecCCEEEEeCCccC
Confidence              235566667777777776 5411 1111111123443222  21  22 33455554 699998876   776543 5


Q ss_pred             CcccHHHHHHHHHHHhhh
Q 015283          391 SLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++++|++++.+
T Consensus       408 t~~ei~~~~~~l~~~l~~  425 (429)
T PRK06173        408 SPDELSQLTSGLLRVLKQ  425 (429)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            999999999999999875

>PRK07036 hypothetical protein; Provisional

Probab=99.69  E-value=1.1e-14  Score=141.39  Aligned_cols=340  Identities=11%  Similarity=0.089  Sum_probs=186.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++... +...+  .+.....++.+.+++.....      .+.+.+  +++
T Consensus        51 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~s  120 (466)
T PRK07036         51 RRYLDGIGGMWCVNVGYG--REEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGD------LNHVFL--TTG  120 (466)
T ss_pred             CEEEECcccHHhhcCCCC--CHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCC
Confidence            467888877532244554  588998888877542 11122  12222334555555443211      357888  999


Q ss_pred             hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhhh-hCCC------------CccceeeecC--CCccc----
Q 015283          111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDP--KTVGL----  165 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~--~~~~~----  165 (410)
                      |++|++.+.++.+.+.     +| .+|+....+|.+...... ..|.            .+..++....  ..++.    
T Consensus       121 GseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  200 (466)
T PRK07036        121 GSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAA  200 (466)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHH
Confidence            9999999988876652     22 578888887766542221 1111            1222222110  00111    


Q ss_pred             ----ChhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          166 ----DFEGMIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       166 ----d~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                          ..+.+++.+.. .++...++++...+...|... +..-++++.++|++||+++|.||++.+|+-.   ...+....
T Consensus       201 ~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~~~~~  277 (466)
T PRK07036        201 FCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRL---GHFFASEA  277 (466)
T ss_pred             HHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcC---chhhhhhh
Confidence                12344455543 234566666666666677765 4555999999999999999999999888632   22333321


Q ss_pred             HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHH-H-H-h-hccCcccCCChhHHHHHH---HHhCChh
Q 015283          240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQ-L-K-R-LARPMYSNPPVHGARIVA---NVVGNPA  311 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~-~-~-~-~~~~~~~~~~~~~~~~a~---~~l~~~~  311 (410)
                      ..+..++++   +++|.++ .| +.+|.+++   ++++.+.+... . . . ...+++. ...++..++.   ..++++ 
T Consensus       278 ~~gv~PDiv---t~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~Le~i~~~-  348 (466)
T PRK07036        278 VFGIQPDII---TFAKGLT-SGYQPLGAVII---SERLLDVISGPNAKGNVFTHGFTYS-GHPVACAAALKNIEIMERE-  348 (466)
T ss_pred             hcCCCCCEE---EEccccc-cCccccEEEEE---cHHHHHHHhcccCcCcccccCCCCC-CCHHHHHHHHHHHHHHHhC-
Confidence            122233444   6799997 67 48898754   77765554321 0 0 0 1112332 3333334433   333332 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------------C----HHHHHHhhhcC
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------------N----KAQSDNMTNKW  375 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------------~----~~~~~~ll~~~  375 (410)
                                ...++.+++.++|.+.|+ ++.. .++.......|.+..+.+            +    ..+...+++ .
T Consensus       349 ----------~l~~~~~~~g~~l~~~L~-~l~~-~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  415 (466)
T PRK07036        349 ----------GLCEHVREVGPYFEERLA-SLRE-LPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQE-R  415 (466)
T ss_pred             ----------CHHHHHHHHHHHHHHHHH-Hhcc-CCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHH-C
Confidence                      334455555555555555 4321 111111222333322211            0    122344544 6


Q ss_pred             cEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          376 HVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       376 gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      ||.+.+.|   ||+.+. +|++++++++++|.+++..
T Consensus       416 Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~  452 (466)
T PRK07036        416 GLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEE  452 (466)
T ss_pred             CcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence            99998865   666442 4999999999999988865

>PLN03032 serine decarboxylase; Provisional

Probab=99.69  E-value=1.1e-14  Score=136.31  Aligned_cols=298  Identities=12%  Similarity=0.057  Sum_probs=180.7

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCce--EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR  156 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~i--~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~  156 (410)
                      ..++.+.+.+++....|.+  ++++  .+  |+|||+|+..+....+...++..|+++.-.|.+....++..|.+++.+|
T Consensus        64 a~~~e~~v~~~ia~llg~~--~~~~~G~f--TsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~  139 (374)
T PLN03032         64 SRQFEVGVLDWFARLWELE--KDEYWGYI--TTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVP  139 (374)
T ss_pred             HHHHHHHHHHHHHHHhCCC--CccCCEEE--eCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEee
Confidence            4566666666655555432  4555  77  9999999988754444444667899999999999999999999988898


Q ss_pred             eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC-----CcccccccCCCCCCCCCC
Q 015283          157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-----HIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~-----~~li~Deay~~~~~~~~~  231 (410)
                      .  ..++.+|++.|++.+.+....+.+++.+..+|+||.   .+++++|+++|+++|     +++.+|.+|.++... ..
T Consensus       140 ~--d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~---idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p-~~  213 (374)
T PLN03032        140 T--LPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGA---VDDLDRILRILKELGYTEDRFYIHCDGALFGLMMP-FV  213 (374)
T ss_pred             e--CCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCcc---CCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhh-cc
Confidence            8  456789999999999864335677777778999999   566778888899996     589999998664321 11


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC-cccCCChhHHHHHH--HHhC
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP-MYSNPPVHGARIVA--NVVG  308 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~--~~l~  308 (410)
                      .....+. +  ...-+.+..|.+|.++.| ..+|.+++   .+...+.+.....-+... .+...+.-+..++.  ..|+
T Consensus       214 ~~~~~~~-~--~~~vDSis~s~HK~~g~P-~g~G~ll~---r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~  286 (374)
T PLN03032        214 SRAPEVT-F--RKPIGSVSVSGHKFLGCP-MPCGVALT---RKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLR  286 (374)
T ss_pred             CCCcccC-C--CcCCcEEEECcccccCCC-cCeEEEEE---EchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHH
Confidence            1000111 1  112455677999988733 45688754   334333322111100000 11112221112221  1111


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCC-eEEe
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG-RISL  387 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g-Ris~  387 (410)
                      ..     -.+.+.+..++..++.+++.+.|+ +.+.   .....|......|..-..+   .+.++..+...+.. |+++
T Consensus       287 ~~-----G~~g~~~~~~~~~~~a~~l~~~l~-~~~~---~~~~~p~~~~V~f~~~~~~---~~~~~w~l~~~~~~~hi~v  354 (374)
T PLN03032        287 RK-----GYRGIKRDVQHCMRNAHYLKDRLT-EAGL---TCRLNELSSTVVFERPMDE---AFIKKWQLACEGDIAHVVV  354 (374)
T ss_pred             Hh-----CHHHHHHHHHHHHHHHHHHHHHHH-hCCC---cEEECCCceEEEEcCCCcH---hHhheeeecccCCEEEEEE
Confidence            11     134557788888889999999998 7763   1234455444444322222   12233333333333 7775


Q ss_pred             cC-CCcccHHHHHHHHHHH
Q 015283          388 AG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       388 ~~-~~~~~i~~~~~~l~~~  405 (410)
                      .. .+.+.++++++.|+++
T Consensus       355 m~~~~~~~id~fi~dl~~~  373 (374)
T PLN03032        355 MPNVTVEKLDEFVEELVEV  373 (374)
T ss_pred             CCCCCHHHHHHHHHHHhcc
Confidence            54 5778899999888763

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.69  E-value=7e-15  Score=142.66  Aligned_cols=339  Identities=9%  Similarity=0.043  Sum_probs=192.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCc--cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~--~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++... +..  .| ......++.+.+++.....      .+.+.+  +++
T Consensus        47 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~~s  115 (466)
T PRK07030         47 KRYLDAVSSWWVNVFGHA--NPRINQRIKDQVDQLEHVILAGF-SHEPVIELSERLVKITPPG------LSRCFY--ADN  115 (466)
T ss_pred             CEEEEcchhHHhhcCCCC--CHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHHhCCCC------cCEEEE--eCC
Confidence            467888877542344554  588888888877542 111  22 2223345555555543211      357888  999


Q ss_pred             hhhHHHHHHHHHHHh----C-C-CCEEEEcCCCCcchhhh-hhhCCC------------CccceeeecCC--Ccc-----
Q 015283          111 GTGSLRLAAALIERY----F-P-GAKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPK--TVG-----  164 (410)
Q Consensus       111 gt~a~~~~~~~~~~~----~-~-gd~Vl~~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~--~~~-----  164 (410)
                      |++|++.+.++.+.+    . + ..+|+....+|.+.... +...|.            .+..+|..+..  ..+     
T Consensus       116 GsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~  195 (466)
T PRK07030        116 GSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEE  195 (466)
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHH
Confidence            999999998887654    1 2 35788888877665322 211111            11222221100  000     


Q ss_pred             ---cChhhHHHHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          165 ---LDFEGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       165 ---~d~~~l~~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                         -+++.+++.+.+.++....+++.. .+...|... +..-++++.++|++||+++|.||++.+|+-.   ...+....
T Consensus       196 ~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRt---G~~~a~~~  272 (466)
T PRK07030        196 HSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRT---GTMFACEQ  272 (466)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcc---ccchHHHh
Confidence               124556777765445566666554 366667755 4555999999999999999999999988732   23333322


Q ss_pred             HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHHH---HhCChh
Q 015283          240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVAN---VVGNPA  311 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~---~l~~~~  311 (410)
                      + +..++++   .++|.++ .| +.+|.+++   ++++.+.+.....   . ...+++. ...++..++..   .+.++ 
T Consensus       273 ~-gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~h~~T~~-gnpla~aaa~a~L~~i~~~-  342 (466)
T PRK07030        273 A-GIRPDFL---CLSKALT-GGYLPLAAVLT---TDTVYQAFYDDYPTLRAFLHSHSYT-GNPLACAAALATLDIFEQD-  342 (466)
T ss_pred             c-CCCCCEE---eeehhcc-CCcccceEEEe---cHHHHHHHhcccccccccccCCCCC-CCHHHHHHHHHHHHHHHhc-
Confidence            2 3334555   4699998 68 48898755   7776555432110   0 1222332 33333344333   33332 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------------C----HHHHHHhhhcC
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------------N----KAQSDNMTNKW  375 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------------~----~~~~~~ll~~~  375 (410)
                                ...++.++..+++.+.|+ ++. ..+........|.+.-+.+            +    ..+..++++ +
T Consensus       343 ----------~l~~~~~~~G~~l~~~L~-~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~  409 (466)
T PRK07030        343 ----------NVIENNRALARRMAEATA-HLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALE-R  409 (466)
T ss_pred             ----------CHHHHHHHHHHHHHHHHH-HHh-cCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHH-C
Confidence                      334555556666666665 442 1111111223344322221            0    123445555 6


Q ss_pred             cEEEcCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          376 HVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       376 gi~v~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |+.+.+.|   |+..+ ..+++++++++++|.++++++
T Consensus       410 Gvl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~  447 (466)
T PRK07030        410 GALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA  447 (466)
T ss_pred             CeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence            99998865   66533 359999999999999998764

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.69  E-value=9.2e-15  Score=142.76  Aligned_cols=341  Identities=15%  Similarity=0.091  Sum_probs=186.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.... ...+  .+.....++.+.+.+.+...     ..+.+.+  +++
T Consensus        89 ~~ylD~~sg~~~~~lGh~--hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~-----~~~~v~f--~~S  159 (504)
T PLN02760         89 KKYLDALAGLWCTALGGS--EPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTAR-----KMGKVFF--TNS  159 (504)
T ss_pred             CEEEEcCcCHHhcccCCC--CHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCC-----CCCEEEE--eCC
Confidence            567898887532355554  5889999888875421 1111  11222334444444442211     1257888  899


Q ss_pred             hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCCC------------ccceeeecCCC----c----
Q 015283          111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPKT----V----  163 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~----~----  163 (410)
                      |++|++.+.++.+.+.     +| .+|+..+-+|.+..- .+...|..            +..++......    .    
T Consensus       160 GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  239 (504)
T PLN02760        160 GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEE  239 (504)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHH
Confidence            9999999988776542     23 578888877765532 22212211            11111100000    0    


Q ss_pred             ---ccChhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          164 ---GLDFEGMIADIKA-APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       164 ---~~d~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                         ....+++++.+.. .++...+|++...+.-.|.+.+ ..-+++|.++|++||+++|.||++.+|+-.   ...+...
T Consensus       240 ~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRt---G~~~a~e  316 (504)
T PLN02760        240 EFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRL---GTMFGCD  316 (504)
T ss_pred             HHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCccc---chhhHHH
Confidence               0012446666642 2334566666666666677654 555999999999999999999999888632   2233332


Q ss_pred             HHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHHHH---hCCh
Q 015283          239 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVANV---VGNP  310 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~~---l~~~  310 (410)
                      .+ +..+++   .+++|.+| .| +.+|.+++   ++++.+.+.....   . ....+++ .+.++..++...   +.++
T Consensus       317 ~~-gv~PDi---vtlgK~lg-gG~~PigAv~~---~~~i~d~~~~~~~~~~~~~h~~T~~-gnPl~~Aaala~Le~i~~~  387 (504)
T PLN02760        317 KY-NIKPDL---VSLAKALS-SAYMPIGAVLV---SPEISDVIHSQSNKLGSFAHGFTYS-GHPVSCAVALEALKIYKER  387 (504)
T ss_pred             hc-CCCCcE---EEeccccc-CCccccceEee---cHHHHhhhhcccccccCcccCCCCC-CCHHHHHHHHHHHHHHHhC
Confidence            22 222343   47899997 45 57888644   6775555432110   0 1222333 233333443333   3222


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------------C---H-HHHHHhhhc
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------------N---K-AQSDNMTNK  374 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------------~---~-~~~~~ll~~  374 (410)
                                 ...++.+++.++|.+.|+ ++. ..++.......|.+.-+.+            +   . .+...+++ 
T Consensus       388 -----------~l~~~~~~~g~~l~~~L~-~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-  453 (504)
T PLN02760        388 -----------NIPEHVNKIAPRFQDGIK-AFS-GSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKK-  453 (504)
T ss_pred             -----------CHHHHHHHHHHHHHHHHH-HHh-cCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHh-
Confidence                       334555566666666665 441 1111111122233322111            0   1 12345554 


Q ss_pred             CcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          375 WHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       375 ~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +||.+.+.|   ||+.+. .|+++++++++++.+++..+
T Consensus       454 ~Gvl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~  492 (504)
T PLN02760        454 RGMLVRVAGDNIMMSPPLIITPEEVDELISIYGKALKAT  492 (504)
T ss_pred             CCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            699998866   777542 49999999999999998754

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.69  E-value=5.2e-15  Score=141.55  Aligned_cols=335  Identities=11%  Similarity=0.060  Sum_probs=199.0

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-----
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-----  125 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-----  125 (410)
                      .++.|.+.+++...++... ..+.......++.+.+.+++.+..|.+-..+++.+.-|+|||+|+.++....+..     
T Consensus        51 t~~~p~~~~~~~~~l~~~~-~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~  129 (431)
T TIGR01788        51 TWMEPEARKLMDETINKNM-IDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM  129 (431)
T ss_pred             CCCCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence            3346778888877775332 2222222334666666666665555421113454433799999999875333211     


Q ss_pred             -CCC-----CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCH
Q 015283          126 -FPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP  199 (410)
Q Consensus       126 -~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~  199 (410)
                       ..|     ..|++++-.|.++...++..|.+++.+|..+ +++.+|++.|++.+.+   .+.+++.+..+|.||.   .
T Consensus       130 ~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~---~t~lV~~t~g~t~tG~---i  202 (431)
T TIGR01788       130 EAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDE---NTIGVVCILGTTYTGE---Y  202 (431)
T ss_pred             HhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhh---CCeEEEEEeCCCCCcc---c
Confidence             112     3688899999999999988899999998842 3457999999999986   6778888889999999   5


Q ss_pred             HHHHHHHHHHHHc------CCcccccccCCCCCCC-CCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEe
Q 015283          200 EQWEKIADVIQEK------NHIPFFDVAYQGFASG-SLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVC  271 (410)
Q Consensus       200 ~~l~~i~~~~~~~------~~~li~Deay~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~  271 (410)
                      +++++|+++|+++      |+++.+|.+|.++... ......+.+    ....-+.+..|.+|.+ ++.|  +|.+++  
T Consensus       203 dpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~----~~~~~DSis~s~HK~~~~P~g--~G~l~~--  274 (431)
T TIGR01788       203 EDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDF----RLPRVKSINVSGHKYGLVYPG--VGWVIW--  274 (431)
T ss_pred             CCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhc----CCCCceEEEECchhccCCCCC--cEEEEE--
Confidence            5667777789999      9999999998854310 000111111    1223456777999976 6655  688744  


Q ss_pred             CCchhH-HHHHHHHHhhccC----cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283          272 SSSDLA-ARVKSQLKRLARP----MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       272 ~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~  346 (410)
                      ++++.. +.+... ..+...    .....+.-+..++..++.   +...-.+.++++.++..++.+++.+.|+ +.+.  
T Consensus       275 r~~~~l~~~~~~~-~~yl~~~~~~~t~~~sR~g~~al~~w~~---l~~lG~~G~~~i~~~~~~la~~l~~~L~-~~~~--  347 (431)
T TIGR01788       275 RDEEALPEELIFH-VNYLGGDEPTFTLNFSRPANQVIAQYYN---FLRLGREGYRKIMQNSLDVARYLAEEIA-KLGP--  347 (431)
T ss_pred             eChHHcchhheec-ccccCCCCCCcceecCchHHHHHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHH-hCCC--
Confidence            333211 111100 001110    001111111122211211   1111124567888888889999999998 7752  


Q ss_pred             Cccccc--CCcceeeec--C-----CCHHHHHHhhhcCcEEE----cCC---C----eEEec-CCCcccHHHHHHHHHHH
Q 015283          347 DWSFIL--RQIGMFSFT--G-----LNKAQSDNMTNKWHVYM----TKD---G----RISLA-GLSLAKCEYLADAIIDS  405 (410)
Q Consensus       347 ~~~~~~--~~~~~~~~~--~-----~~~~~~~~ll~~~gi~v----~~~---g----Ris~~-~~~~~~i~~~~~~l~~~  405 (410)
                       +++..  +..+...|-  +     .+...+.+.|.+.|+.+    .|.   |    |+++. ..+++.++.+++.|+++
T Consensus       348 -~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~  426 (431)
T TIGR01788       348 -FEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAA  426 (431)
T ss_pred             -EEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence             44443  244444332  2     33333334444569863    332   2    88764 35788999999999999


Q ss_pred             hhhc
Q 015283          406 YHNV  409 (410)
Q Consensus       406 l~~~  409 (410)
                      +..+
T Consensus       427 ~~~~  430 (431)
T TIGR01788       427 LAYL  430 (431)
T ss_pred             HHhh
Confidence            8765

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.69  E-value=1.4e-14  Score=139.89  Aligned_cols=343  Identities=13%  Similarity=0.065  Sum_probs=191.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++..- +...+ .......++.+.+++.....      .+.+.+  +++|
T Consensus        49 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~------~~~v~f--~~sG  118 (445)
T PRK09221         49 RKILDGTAGLWCCNAGHG--RPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGG------LDHVFF--TNSG  118 (445)
T ss_pred             CEEEEccccHhhccCCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCc
Confidence            467888877432244554  588888888877541 11111 12222335555555553211      357899  9999


Q ss_pred             hhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhhh-hhhCC------------CCccceeeec-CC--Cccc----
Q 015283          112 TGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYD-PK--TVGL----  165 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~-~~--~~~~----  165 (410)
                      ++|++.+.++.+.+.     + ..+|+....+|.+.... +...|            ..+..+|... ..  .+..    
T Consensus       119 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (445)
T PRK09221        119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPE  198 (445)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHH
Confidence            999999988877653     1 25788888887655321 11111            0112222210 00  0000    


Q ss_pred             ----ChhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          166 ----DFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       166 ----d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                          ..+.+++.+...+ ++..++++...+...|...+. +-++++.++|++||+++|+||++.+|+-.   ...+....
T Consensus       199 ~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt---G~~~~~~~  275 (445)
T PRK09221        199 HGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRL---GAAFAAER  275 (445)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcC---chhhHHHh
Confidence                1346667676432 455666666667777876654 44999999999999999999998887632   22333322


Q ss_pred             HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHHHHhCChhhHH
Q 015283          240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVANVVGNPALFD  314 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~  314 (410)
                      + +..++++   +++|.++ .| +.+|.+++   ++++.+.+...-.   . ....++. .+.++..++...|+--    
T Consensus       276 ~-gv~PDi~---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~~~~T~~-~~pl~~aaa~a~L~~i----  342 (445)
T PRK09221        276 F-GVTPDII---TFAKGLT-NGAIPMGAVIA---SDEIYDAFMQGPEYAIEFFHGYTYS-AHPVACAAGLATLDIY----  342 (445)
T ss_pred             c-CCCCCEE---Eeccccc-cCcccceeeEE---cHHHHHhhccCcccccccccccCCC-cCHHHHHHHHHHHHHH----
Confidence            2 2223433   7899997 45 67888644   7776555432100   0 1112333 3333333333332210    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C---HHHHHHhhhcCcEEEcCCC-
Q 015283          315 EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N---KAQSDNMTNKWHVYMTKDG-  383 (410)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~ll~~~gi~v~~~g-  383 (410)
                        ++  +...++.+++.+++.+.|+ ++.....+..+ ...|.+.-+.+       .   ....+++++ .||.+.+++ 
T Consensus       343 --~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~v~~v-rg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~  415 (445)
T PRK09221        343 --RE--EDLFERAAELAPYFEDAVH-SLKGLPHVIDI-RNIGLVAGIELAPRPGAPGARGYEAFMKCFE-KGLLVRYTGD  415 (445)
T ss_pred             --Hh--ccHHHHHHHHHHHHHHHHH-hhccCCCEEEE-ecCceEEEEEEecccccccchHHHHHHHHHH-CCeEEeecCC
Confidence              00  1345566777777777776 55210011111 22233322211       1   123455555 699998776 


Q ss_pred             --eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          384 --RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 --Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                        ||+.+. .|++++++++++|++++.++
T Consensus       416 ~lr~~Ppl~~t~~eid~~~~~l~~~l~~~  444 (445)
T PRK09221        416 TIALSPPLIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             EEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence              887443 49999999999999998764

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.69  E-value=9.2e-15  Score=140.35  Aligned_cols=157  Identities=21%  Similarity=0.181  Sum_probs=119.7

Q ss_pred             cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCc
Q 015283           77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPW  152 (410)
Q Consensus        77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~  152 (410)
                      ....++++.++++....        ..++  +++||.|+.+++  ...+.+||+|+++...|.+....+    ...|.++
T Consensus        64 p~~~~le~~lA~l~g~~--------~av~--~sSGt~Al~~al--~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v  131 (433)
T PRK08134         64 PTVAVLEERVAALEGGV--------GAIA--TASGQAALHLAI--ATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIET  131 (433)
T ss_pred             hHHHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHHH--HHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEE
Confidence            44789999999996432        3455  799999999884  444789999999999998764443    4578888


Q ss_pred             cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283          153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN  232 (410)
Q Consensus       153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~  232 (410)
                      +.++.   +    |++.+++.+++   +++++++.+|+||||.+.+   +++|+++|+++|+++|+|.++......    
T Consensus       132 ~~vd~---~----d~~~l~~~i~~---~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~----  194 (433)
T PRK08134        132 TFVKP---G----DIDGWRAAIRP---NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL----  194 (433)
T ss_pred             EEECC---C----CHHHHHHhcCC---CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            88775   1    78999998875   7788888899999999654   677788899999999999996532211    


Q ss_pred             chhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      .  ++     ..+.++++.|.+|.++.+|-.+|.+++
T Consensus       195 ~--pl-----~~GaD~vv~S~tK~l~g~g~~~gG~v~  224 (433)
T PRK08134        195 R--PF-----EHGADLVYHSATKFLGGHGTAIGGVLV  224 (433)
T ss_pred             C--ch-----hcCCCEEEeccccccCCCCCceEEEEE
Confidence            1  11     224678899999999888877777643

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.68  E-value=5.9e-16  Score=130.29  Aligned_cols=167  Identities=22%  Similarity=0.154  Sum_probs=121.9

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh-hhhhhCCCCccceee
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVPWSEYRY  157 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~v~~  157 (410)
                      ..++++.+++++.      .+.+++++  ++|||+++.++.+.+  ..+|++|+++.++|+++. ..+...|++++.++.
T Consensus         2 ~~~~~~~l~~~~~------~~~~~~~~--~~~~t~a~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~   71 (170)
T cd01494           2 LEELEEKLARLLQ------PGNDKAVF--VPSGTGANEAALLAL--LGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPV   71 (170)
T ss_pred             HHHHHHHHHHHcC------CCCCcEEE--eCCcHHHHHHHHHHh--CCCCCEEEEeecccceehhhHHHhcCCEEEEecc
Confidence            3578999999974      12567888  889999999984333  457999999999999888 788889999998887


Q ss_pred             ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh
Q 015283          158 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV  237 (410)
Q Consensus       158 ~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~  237 (410)
                      .+......+.+.+++...  .+++.++++++++||+|...+.   ++|.++|+++|+++|+|++|..+.....   ..  
T Consensus        72 ~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~---~~--  141 (170)
T cd01494          72 DDAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAP---GV--  141 (170)
T ss_pred             CCCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEeccccccccccc---cc--
Confidence            433222233334444332  2467888889999999997765   6777779999999999999988775310   00  


Q ss_pred             HHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       238 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                       . ....+.++++.|++|.++.  .++|++++
T Consensus       142 -~-~~~~~~d~~~~s~~K~~~~--~~~G~l~~  169 (170)
T cd01494         142 -L-IPEGGADVVTFSLHKNLGG--EGGGVVIV  169 (170)
T ss_pred             -c-cccccCCEEEEEcccccCC--CceEEEEe
Confidence             0 1123467888999999975  66899753

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.68  E-value=3.7e-15  Score=140.65  Aligned_cols=312  Identities=14%  Similarity=0.043  Sum_probs=177.9

Q ss_pred             CcccccHHHHHHHHHhhcc---CCCccCcCC-------cccHHHHHHHHHHhcCCCCCcccCCceEEEecCC-hhhHHHH
Q 015283           49 LQPYVLDVVKKAENLMLER---GENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRL  117 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~---~~~~~y~~~-------~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g-gt~a~~~  117 (410)
                      |+..+|+.|++++.+.+..   .....|...       .-+.+.|+.+++++...     +++++++  +.| ||++++.
T Consensus         6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~-----~~~~vvf--~~gs~T~a~~~   78 (355)
T cd00611           6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIP-----DNYKVLF--LQGGATGQFAA   78 (355)
T ss_pred             CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCceEEE--EcCCchHHHHH
Confidence            5566789999999887621   011122211       33568888899987532     1567888  877 9999999


Q ss_pred             HHHHHHHhC---CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH-HHHHhcCCCCcEEEEeCCCCCCC
Q 015283          118 AAALIERYF---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM-IADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       118 ~~~~~~~~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l-~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      +  +.+.+.   +||.|++ .+.......+++..|.+++.++..+ ++...+..++ +..++   +++.++.+++..|.|
T Consensus        79 ~--~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~-~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~t  151 (355)
T cd00611          79 V--PLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKE-EGKYTKIPDVETWDLA---PDAAYVHYCSNETIH  151 (355)
T ss_pred             H--HHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEeccc-ccCCCCCCCHhhcCCC---CCCCEEEEeCCcccc
Confidence            8  344455   4444443 2222223336788899988888632 1111132222 22233   366777888999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |...+        ++++.||+++++|.+ +.++..+.+.+     .    . + +.+.|..|.+|++|+  |.+++   +
T Consensus       152 G~~~~--------~i~~~~g~~~~VDa~-qs~g~~~idv~-----~----~-~-~~~ss~~K~lGP~G~--g~l~~---~  206 (355)
T cd00611         152 GVEFD--------EVPDTGGVPLVADMS-SNILSRPIDVS-----K----F-G-VIYAGAQKNLGPAGV--TVVIV---R  206 (355)
T ss_pred             cEEcc--------eecccCCCeEEEEcc-ccccCCCCCHH-----H----h-C-EEEeecccccCCCce--EEEEE---C
Confidence            99532        335569999999999 54443222211     1    1 2 345667999998875  77655   7


Q ss_pred             chhHHHHHHHH------Hh-hccC-cccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcc-C
Q 015283          274 SDLAARVKSQL------KR-LARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKD-K  343 (410)
Q Consensus       274 ~~~~~~~~~~~------~~-~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~-g  343 (410)
                      ++..+++....      .. .... ...+|+..+..++...|+-   .  ... .++++.++.+++.+++.+.|+ ++ |
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~---l--~~~gg~e~i~~~~~~l~~~l~~~l~-~~~g  280 (355)
T cd00611         207 KDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKW---L--KEQGGVEAMEKRNRQKAQLLYDTID-NSNG  280 (355)
T ss_pred             HHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHH---H--HHcCCHHHHHHHHHHHHHHHHHHHH-hCcc
Confidence            77665543211      00 0111 1223433333333333221   1  012 257888999999999999999 88 5


Q ss_pred             CCCCcccccCCcce-eeec--CCC-HHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHH
Q 015283          344 SGKDWSFILRQIGM-FSFT--GLN-KAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       344 ~~~~~~~~~~~~~~-~~~~--~~~-~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                      +...........+. ..|.  +.. .+.....+.+.|+++.++    |  |+|+.. .|++|++++++.|+++
T Consensus       281 l~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         281 FYRGPVDKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             ccccCCCHHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            31000000112212 2222  220 122322334579985444    2  999765 4899999999999885

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.68  E-value=9.4e-15  Score=136.88  Aligned_cols=310  Identities=14%  Similarity=0.023  Sum_probs=183.1

Q ss_pred             ccHHHHHHHHHhhcc---CCCccCcCCc-------ccHHHHHHHHHHhcCCCCCcccCCceEEEecCC-hhhHHHHHHHH
Q 015283           53 VLDVVKKAENLMLER---GENKEYLPIE-------GLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRLAAAL  121 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~---~~~~~y~~~~-------g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g-gt~a~~~~~~~  121 (410)
                      +|..|++++.+.+..   .+...|....       -+.+.++.+++++...     +..++++  +.| ||++++.+  +
T Consensus         3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-----~~~~v~~--~~gsgT~a~ea~--~   73 (349)
T TIGR01364         3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-----DNYEVLF--LQGGATGQFAAV--P   73 (349)
T ss_pred             CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-----CCceEEE--EcCCchHHHHHH--H
Confidence            367888888777642   1212232211       2345566666665321     1345766  655 99999998  5


Q ss_pred             HHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeec--CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCC
Q 015283          122 IERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYD--PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP  197 (410)
Q Consensus       122 ~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~  197 (410)
                      .+.+.+||++++..-+..+.  .++++.+|. +..+...+  +++..+++++++.  +   ++..++.+++..|.||+..
T Consensus        74 ~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~v~~th~ETstGv~~  147 (349)
T TIGR01364        74 LNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S---EDAAYVHYCANETIHGVEF  147 (349)
T ss_pred             HhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C---CCCCEEEEcCCCCcccEec
Confidence            55566999988877655433  567778888 66665421  1223455555442  2   2566777788899999965


Q ss_pred             CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhH
Q 015283          198 TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA  277 (410)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~  277 (410)
                      +        ++++.+++++++|.+ +.++..+.+.+     .    .+  +++.|..|.+|+||+  |.+++   +++.+
T Consensus       148 ~--------~l~~~~~~l~iVDav-ss~g~~~id~~-----~----~d--~~~~ssqK~lgP~Gl--g~l~~---s~~~~  202 (349)
T TIGR01364       148 R--------ELPDVKNAPLVADMS-SNILSRPIDVS-----K----FG--LIYAGAQKNIGPAGL--TVVIV---RKDLL  202 (349)
T ss_pred             c--------eecccCCCeEEEEcc-ccccCccCCHH-----H----cc--EEEEecccccCCCce--EEEEE---CHHHH
Confidence            4        456678999999999 55553322211     1    12  788888999998885  77655   77776


Q ss_pred             HHHHHHH------Hh-hc-cCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC-CCCC
Q 015283          278 ARVKSQL------KR-LA-RPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK-SGKD  347 (410)
Q Consensus       278 ~~~~~~~------~~-~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~  347 (410)
                      +++....      .. .. ...+.+|+.....++...|+.-     ..+ .++++.++.+++.+++.+.|+ +++ +...
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l-----~~~gG~e~i~~r~~~l~~~l~~~l~-~~~gl~~~  276 (349)
T TIGR01364       203 GRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWL-----KEQGGVKAIEKRNQAKAQLLYDTID-NSNGFYRN  276 (349)
T ss_pred             hhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHH-----HHcCCHHHHHHHHHHHHHHHHHHHH-hCCCeecc
Confidence            6543211      10 00 1112244444333333333211     022 267888999999999999999 884 3111


Q ss_pred             cccccCCc-ceeee--cCCC-HHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          348 WSFILRQI-GMFSF--TGLN-KAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       348 ~~~~~~~~-~~~~~--~~~~-~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      .......+ ....+  .+.. .+.+...+.+.|+++.++    |  |+|+.. .+.+|++.+++.|++++++
T Consensus       277 ~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~  348 (349)
T TIGR01364       277 PVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK  348 (349)
T ss_pred             CCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence            11000112 22222  2221 123323445579977666    3  999665 4899999999999998765

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.68  E-value=1.4e-14  Score=138.94  Aligned_cols=158  Identities=18%  Similarity=0.113  Sum_probs=113.8

Q ss_pred             cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCc
Q 015283           77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPW  152 (410)
Q Consensus        77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~  152 (410)
                      .....|++.++++...        +..++  +++|+.|+..+  +...+.+||+|+++...|.+....    +...|.++
T Consensus        69 p~~~~Le~~lA~l~g~--------~~av~--~sSG~aAi~~a--l~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v  136 (436)
T PRK07812         69 PTQDVVEQRIAALEGG--------VAALL--LASGQAAETFA--ILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEV  136 (436)
T ss_pred             chHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEE
Confidence            3467899999988533        23444  68999998887  455578999999999888775543    34466666


Q ss_pred             cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283          153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN  232 (410)
Q Consensus       153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~  232 (410)
                      +.++  +.    .|++.+++.+++   ++++|++.+|+||+|.+.   ++++|+++|+++|+++|+|+++.....    .
T Consensus       137 ~~vd--d~----~d~e~l~~ai~~---~tklV~ie~~sNp~G~v~---Dl~~I~~la~~~gi~liVD~t~a~~~~----~  200 (436)
T PRK07812        137 SFVE--DP----DDLDAWRAAVRP---NTKAFFAETISNPQIDVL---DIPGVAEVAHEAGVPLIVDNTIATPYL----I  200 (436)
T ss_pred             EEEC--CC----CCHHHHHHhCCC---CCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCccccc----C
Confidence            6553  11    278888888874   678888899999999955   566777779999999999999653221    1


Q ss_pred             chhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      .  +    . ..+.++++.|++|.+|..|--+|++++
T Consensus       201 ~--p----l-~~GaDivv~S~tK~lgg~G~~i~G~vv  230 (436)
T PRK07812        201 R--P----L-EHGADIVVHSATKYLGGHGTAIAGVIV  230 (436)
T ss_pred             C--c----h-hcCCCEEEEecccccCCCCCeEEEEEE
Confidence            1  1    1 123567789999999877766777743

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.68  E-value=2e-14  Score=139.47  Aligned_cols=341  Identities=11%  Similarity=0.052  Sum_probs=187.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|.--...|+.  .|.+.+++.+++.. .+.  ..+ +..-..++.+.+++.+....+. ...+.+.+  +++
T Consensus        64 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~~~~-~~~~~v~f--~~s  137 (472)
T PRK08742         64 RRYLDAVSSWWTNLFGHA--EPRIGAAIAAQAGELEQVMLAGF-THEPAVQLAEQLLAIAPRQDGR-APLSKVFY--ADN  137 (472)
T ss_pred             CEEEEcCccHHhccCCCC--CHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhCCCcccC-CCCCEEEE--eCC
Confidence            467888877542344654  58888888877643 111  122 2222345555555554221100 01357889  999


Q ss_pred             hhhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCC--Ccc-----
Q 015283          111 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPK--TVG-----  164 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~--~~~-----  164 (410)
                      |++|++.+.++.+.+.     + ..+|+..+.+|.+...... ..|.            .+..+|..+..  .++     
T Consensus       138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~  217 (472)
T PRK08742        138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED  217 (472)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence            9999999998887662     2 2688888887766542221 1111            11222221100  001     


Q ss_pred             ---cChhhHHHHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          165 ---LDFEGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       165 ---~d~~~l~~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                         -+++.+++.+...++....+++.. .++-.|..+ +..-++++.++|++||+++|.||++.+|+-.   ...+....
T Consensus       218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRt---G~~~a~e~  294 (472)
T PRK08742        218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRT---GTLFACEQ  294 (472)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC---ccchHHHh
Confidence               124566666754444566666555 366778755 5556999999999999999999999998742   23444333


Q ss_pred             HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH--h-hccCcccCCChhHHHHH---HHHhCChhh
Q 015283          240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK--R-LARPMYSNPPVHGARIV---ANVVGNPAL  312 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~a---~~~l~~~~~  312 (410)
                      + +..++++   .++|.++ .| +.+|.+++   ++++.+.+.....  . ...+++. ...++..++   ...++++++
T Consensus       295 ~-gv~PDiv---~~gKgl~-gG~~Plaav~~---~~ei~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa~a~L~~i~~~~l  365 (472)
T PRK08742        295 A-GVMPDLL---CLSKGLT-GGFLPLSAVLA---TQQLYDAFLDDSRERAFLHSHSYT-GNPLACAAALATLDIFADDDV  365 (472)
T ss_pred             c-CCCCCEE---EEccccc-CCCCCcceeec---cHHHHHHhhccCccCccCcCCCCC-ccHHHHHHHHHHHHHHHHCCH
Confidence            2 3334555   4699997 67 48888654   7775554422100  0 1222333 233333333   333433332


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---hhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhh
Q 015283          313 FDEWKAEMEMMAGRIKNVRQKLFDS---LSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTN  373 (410)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~l~~~---l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~  373 (410)
                                 .++.++..+++.+.   ++ +.+.   +..+.. .|.+.-+.+          .      ....+++++
T Consensus       366 -----------~~~~~~~g~~l~~~~~~~~-~~~~---i~dvRG-~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (472)
T PRK08742        366 -----------IARNQPTAARMTQLAAQIG-EHPH---VADVRQ-AGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALA  429 (472)
T ss_pred             -----------HHHHHHHHHHHHHHHHHHh-cCCC---eeeEec-cceEEEEEeccCccccccCCchhHHHHHHHHHHHH
Confidence                       22222333333322   33 3321   112222 333322211          0      112445555


Q ss_pred             cCcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          374 KWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       374 ~~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                       .||.+.+.|   ||..+- ++++++++++++|.++++++
T Consensus       430 -~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~  468 (472)
T PRK08742        430 -RGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEA  468 (472)
T ss_pred             -CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence             699998876   776442 49999999999999998763

>PRK12403 putative aminotransferase; Provisional

Probab=99.68  E-value=2.1e-14  Score=139.33  Aligned_cols=341  Identities=13%  Similarity=0.042  Sum_probs=179.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++... +...+  .+.....++.+.+++++...      .+.+.+  +++
T Consensus        54 ~~ylD~~~g~~~~~lGh~--hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S  123 (460)
T PRK12403         54 KRYLDGMSGLWCTNLGYG--RKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGH------YSHAIY--TNS  123 (460)
T ss_pred             CEEEECchhHHhhcCCCC--CHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCC
Confidence            467888777543345664  588999988887542 11111  12223445666666664221      267888  999


Q ss_pred             hhhHHHHHHHHHHHh-----CCCCE-EEEcCCCCcch-hhhhhhCCCC-----------ccceeeecC--CCccc-----
Q 015283          111 GTGSLRLAAALIERY-----FPGAK-VLISSPTWGNH-KNIFNDARVP-----------WSEYRYYDP--KTVGL-----  165 (410)
Q Consensus       111 gt~a~~~~~~~~~~~-----~~gd~-Vl~~~p~y~~~-~~~~~~~g~~-----------~~~v~~~~~--~~~~~-----  165 (410)
                      |++|++.+.++.+.+     .+++. |+...-+|.+. ...+...|..           +..+|....  ..+..     
T Consensus       124 GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  203 (460)
T PRK12403        124 GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEF  203 (460)
T ss_pred             cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence            999999998888765     13344 44444555443 2222222211           112221000  00000     


Q ss_pred             ---ChhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          166 ---DFEGMIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       166 ---d~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                         +.+.+++.+.+ .++...++++...+.-.|... +.+-++++.++|++||+++|.||++.+|+-.   ...+....+
T Consensus       204 ~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRt---G~~~a~e~~  280 (460)
T PRK12403        204 GRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRT---GEWFAHEHF  280 (460)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---chhhhhhhc
Confidence               12445555532 223455666555566667765 4555999999999999999999999887632   223332222


Q ss_pred             hhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhh-ccCcccCCChhHHHHH---HHHhCChhhHHH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIV---ANVVGNPALFDE  315 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a---~~~l~~~~~~~~  315 (410)
                       +-.++++   .++|.++ .|. .+|.+++   ++++.+.+...-... ..+++. .+.++..++   ...+++++    
T Consensus       281 -gv~PDiv---~~gK~lg-gG~~Piga~v~---~~~i~~~~~~~~~~~~~~~T~~-gnPl~~Aaala~L~~i~~~~----  347 (460)
T PRK12403        281 -GFEPDTL---SIAKGLT-SGYVPMGGLVL---SKRIAEALVEQGGVFAHGLTYS-GHPVAAAVAIANLKALRDEG----  347 (460)
T ss_pred             -CCCCCeE---EEccccc-ccccceEEEEE---CHHHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHHHHHhcc----
Confidence             2223444   4899998 574 8888744   667544443210111 112222 333333333   33333332    


Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------CH--HH----HHHhhhcCcEE
Q 015283          316 WKAEMEMMAGRIK-NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------NK--AQ----SDNMTNKWHVY  378 (410)
Q Consensus       316 ~~~~~~~~~~~~~-~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~~--~~----~~~ll~~~gi~  378 (410)
                             ..++.+ ++.+++.+.|+ ++-...++.......|.+.-+.+          ..  ..    ...+++ .|+.
T Consensus       348 -------l~~~~~~~~g~~l~~~L~-~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll  418 (460)
T PRK12403        348 -------VVTRVKDDTGPYLQRCLR-EVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFE-EGVI  418 (460)
T ss_pred             -------HHHHHHHHHHHHHHHHHH-HHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHh-CCEE
Confidence                   233332 34444444443 32100111111222333322211          10  11    223344 6999


Q ss_pred             EcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          379 MTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       379 v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.+.+   |++.+. +|+++++++++.+.+++.++
T Consensus       419 ~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~  453 (460)
T PRK12403        419 IRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRT  453 (460)
T ss_pred             EEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            98754   666443 49999999999999998764

>PRK06105 aminotransferase; Provisional

Probab=99.68  E-value=2.3e-14  Score=139.12  Aligned_cols=340  Identities=12%  Similarity=0.078  Sum_probs=189.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++... +...+  .......++.+.+++.....      -+.+.+  +++
T Consensus        48 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S  117 (460)
T PRK06105         48 KRYIEGMAGLWSVALGFS--EQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVP------MSKVFF--TNS  117 (460)
T ss_pred             CEEEEcchhHHhccCCCC--CHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence            568999887542345555  588999988887542 11111  01222335555555553221      357888  999


Q ss_pred             hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhh-hhhCCC------------CccceeeecCCCc--------
Q 015283          111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPKTV--------  163 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~~~--------  163 (410)
                      |++|++.+.++.+.+.     +| .+|+...-+|.+.... +...+.            .+..++..+...+        
T Consensus       118 GseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  197 (460)
T PRK06105        118 GSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEE  197 (460)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChH
Confidence            9999999988765442     23 5788877777554321 111111            1112222110000        


Q ss_pred             ---ccChhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          164 ---GLDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       164 ---~~d~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                         ....+++++.+... +++...|++...+.-.|... +.+-++++.++|++||+++|+||++.+|+-.   ...+...
T Consensus       198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRt---G~~f~~~  274 (460)
T PRK06105        198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRT---GNMFGCE  274 (460)
T ss_pred             HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcC---chhhhHH
Confidence               00135566666432 23456666555666667765 5666999999999999999999999888632   2333332


Q ss_pred             HHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHh---h-ccCcccCCChhHHHHH---HHHhCCh
Q 015283          239 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR---L-ARPMYSNPPVHGARIV---ANVVGNP  310 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~a---~~~l~~~  310 (410)
                      .+ +..++++   +++|.++ .| +.+|++++   ++++.+.+......   . ...++ +.+.++..++   ...+.++
T Consensus       275 ~~-~v~PDi~---~~gK~lg-gG~~P~~av~~---~~~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~aaa~a~L~~i~~~  345 (460)
T PRK06105        275 TF-GIKPDIL---VMSKQLS-SSYQPLSAVLM---NEKVYDPIADESGKIGTFGHGFTA-SGHPVAAAVALENLAIIEER  345 (460)
T ss_pred             hc-CCCCCee---eeecccc-cCcccceEEEE---cHHHHHHHhcccccCcccccCCCC-CCCHHHHHHHHHHHHHHHhc
Confidence            22 2223444   7899998 45 58888754   77755554321100   0 11222 3333333433   3333332


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhhc
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTNK  374 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~~  374 (410)
                                 ...++.+++.++|.+.|+ ++ ...++.......|.+.-+.+          +      ..+...++ +
T Consensus       346 -----------~l~~~v~~~g~~l~~~L~-~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~  411 (460)
T PRK06105        346 -----------DLVGNAAERGARLQARLR-AL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH-E  411 (460)
T ss_pred             -----------cHHHHHHHHHHHHHHHHH-Hh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-H
Confidence                       334555666666666665 44 11111111222333321111          0      12234444 4


Q ss_pred             CcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          375 WHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       375 ~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +||.+.+.|   ||+.+. .|+++++++++++.+++.++
T Consensus       412 ~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~  450 (460)
T PRK06105        412 HGVISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDV  450 (460)
T ss_pred             CCeEEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence            699998865   777543 49999999999999998754

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.67  E-value=6.2e-14  Score=135.03  Aligned_cols=341  Identities=10%  Similarity=0.032  Sum_probs=189.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-...|+.  +|.+.+++.++++...  ...+.......++.+.+++.....      -+.+.+  +.+|
T Consensus        45 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~------~~~v~f--~~sG  114 (427)
T TIGR00508        45 RRLIDGMSSWWAAIHGYN--HPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNA------LDCVFL--ADSG  114 (427)
T ss_pred             CEEEEccchHHHhcCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC------CCEEEE--eCCc
Confidence            568899887532233544  5888888888775421  111112233445666666653221      267888  9999


Q ss_pred             hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhhh-hCCCC-------------ccceeeecCCCc-----ccC
Q 015283          112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARVP-------------WSEYRYYDPKTV-----GLD  166 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~~-~~g~~-------------~~~v~~~~~~~~-----~~d  166 (410)
                      ++|++.+.++...+.     +| .+|+..+.+|.+....+. ..+..             ...++.. ...+     .-|
T Consensus       115 seA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~  193 (427)
T TIGR00508       115 SVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEA  193 (427)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHH
Confidence            999999988776542     23 678888888866532221 11110             1111110 0001     114


Q ss_pred             hhhHHHHHhcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          167 FEGMIADIKAAPGGSFILLHGCA-HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       167 ~~~l~~~i~~~~~~~~~ii~~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      ++++++.+...++...+|++... ++-.|.. ++.+.+++|.++|++||+++|+||++.+++..   ...+....+ +..
T Consensus       194 ~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~---G~~~~~~~~-~v~  269 (427)
T TIGR00508       194 ITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRT---GKLFACEHA-GVV  269 (427)
T ss_pred             HHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---Cccchhhhc-CCC
Confidence            66777777654344555555443 5555654 46788999999999999999999998776532   222222221 222


Q ss_pred             CcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHH-h-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK-R-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEME  321 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~  321 (410)
                      ++++   +++|.++ .|+ .++.++.   ++++.+.+..... . ....++. .+.++..++...|+-  +    .+  +
T Consensus       270 pDi~---~~gK~l~-gG~~p~~a~~~---~~~~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~--l----~~--~  333 (427)
T TIGR00508       270 PDIL---CVGKALT-GGYMTLSATVT---TDKVAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLAI--L----LE--G  333 (427)
T ss_pred             CCEE---Eechhhh-cCcccceEEEE---cHHHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHH--H----Hh--C
Confidence            3433   3799996 674 5666533   7775554432100 0 1112222 233333333333321  0    00  1


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec--CC--CH-HHHHHhhhcCcEEEcCCC---eEEecC-CCc
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL--NK-AQSDNMTNKWHVYMTKDG---RISLAG-LSL  392 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~--~~-~~~~~ll~~~gi~v~~~g---Ris~~~-~~~  392 (410)
                      ...++++++.++|.+.|+ +++....+...... |.+.-+  ..  .. .+..++++ +||++.+.+   |++.+. .++
T Consensus       334 ~~~~~~~~~~~~l~~~L~-~l~~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~l~~~ppl~~t~  410 (427)
T TIGR00508       334 EWQKQVSAIENQLKRELS-PLRKNPVVKDVRVL-GAIGVVEMYKPVNVEELQKKFVE-QGVWIRPFGKLIYVMPPYIITT  410 (427)
T ss_pred             CHHHHHHHHHHHHHHHHH-HhhcCCCEEeEecc-ccEEEEEECCccCHHHHHHHHHH-CCeEEEecCCEEEEECCCCCCH
Confidence            335677777777878777 66421001111112 333211  21  22 34556655 699998765   776552 489


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      ++++++++++++++.+
T Consensus       411 ~~id~~~~~l~~~l~~  426 (427)
T TIGR00508       411 EQLQKLTAALIEALHE  426 (427)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999999864

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.67  E-value=5.8e-14  Score=131.79  Aligned_cols=316  Identities=13%  Similarity=0.103  Sum_probs=185.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+++... + ...| +.....++.+.++++.    +    .+.+.+  +++|
T Consensus        24 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~la~~l~~~~----~----~~~v~~--~~SG   90 (364)
T PRK04013         24 RRYLDLIAGIGVNVLGHN--HPEWVEEMSEQLEKLVVAGPMF-EHEEKEEMLEELSKWV----N----YEYVYM--GNSG   90 (364)
T ss_pred             CEEEEcccChhhccCCCC--CHHHHHHHHHHHHhcCCccCCc-CCHHHHHHHHHHHhhc----C----CCEEEE--eCch
Confidence            568899887543345654  478888888877542 1 1123 3334456666666663    1    257888  8999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-C-------CCCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-A-------RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~-------g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      ++|++.+.++.+.....++|+..+.+|.+....... .       +......... ...+ .|++.+++.+.+   +..+
T Consensus        91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~-~~~~-~d~~~l~~~i~~---~~aA  165 (364)
T PRK04013         91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFK-HIPF-NDVEAAKEAITK---ETAA  165 (364)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcE-EecC-CCHHHHHHHhcC---CcEE
Confidence            999999988877665448999999888765432221 1       1111000000 0011 267788888764   5667


Q ss_pred             EEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          184 LLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       184 ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      +++.+.+...|... +.+-++++.++|++||+++|+||++.++..+    +.+....+ +..++++   +++|.++ .|+
T Consensus       166 vivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG----~~~a~~~~-gv~PDiv---~~gK~lg-gG~  236 (364)
T PRK04013        166 VIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTG----KFLAIEHY-KVEPDIV---TMGKGIG-NGV  236 (364)
T ss_pred             EEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCC----chhHHHhc-CCCCCEE---Eeccccc-CCc
Confidence            77666666666655 4555999999999999999999999877432    23333222 2334555   5699998 588


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      .+|.++.   +.++    ..   ....+++. ...++..++   ...++++++.       ++.++.       + ..+.
T Consensus       237 P~~a~~~---~~~~----~~---~~~~~T~~-gnp~~~aaa~a~l~~i~~~~l~-------~~~~~~-------l-~~l~  290 (364)
T PRK04013        237 PVSLTLT---NFDV----ER---GKHGSTFG-GNPLACKAVAVTLRILRRERLV-------EKAGEK-------F-IEIK  290 (364)
T ss_pred             eeEEEEe---cccc----cC---CCcCCCCC-cCHHHHHHHHHHHHHHHhccHH-------HHHHHH-------H-HHhc
Confidence            8998744   4442    11   11222333 333333333   3444443331       121211       1 1222


Q ss_pred             hccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          340 AKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       340 ~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                       . .    +.......|.+.-+.+.   .....++++ +|+.+.+.|    ||..+- ++++++++++++|.+++++.
T Consensus       291 -~-~----~v~~vRG~Gl~~gve~~~~~~~i~~~~~~-~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~  361 (364)
T PRK04013        291 -G-E----RVVTTRGRGLMIGIVLKKPVGKYVEELQN-RGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVINDI  361 (364)
T ss_pred             -c-C----cceeeeeCcEEEEEEeCCcHHHHHHHHHh-CCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence             1 1    11122333444333332   234556655 699998765    776543 59999999999999998764

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.67  E-value=5.2e-14  Score=122.24  Aligned_cols=322  Identities=14%  Similarity=0.111  Sum_probs=202.9

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      |+..+++.+++++....-...+..+  ..-..+++|-+..-+....     +.-.++  ..+|+.+.+.+  +.+.+.||
T Consensus        24 GPsnl~~~V~~A~~~~~lgh~sPe~--~qIm~~v~egikyVFkT~n-----~~tf~i--sgsGh~g~E~a--l~N~lePg   92 (385)
T KOG2862|consen   24 GPSNLSGRVQEAMSRPSLGHMSPEF--VQIMDEVLEGIKYVFKTAN-----AQTFVI--SGSGHSGWEAA--LVNLLEPG   92 (385)
T ss_pred             CCcCCCHHHHHhhcCCccccCCHHH--HHHHHHHHHHHHHHhccCC-----CceEEE--ecCCcchHHHH--HHhhcCCC
Confidence            5555778888887654322111111  2234577777777765442     233555  66778888887  67778899


Q ss_pred             CEEEEcCC-CCc-chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHH
Q 015283          129 AKVLISSP-TWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKI  205 (410)
Q Consensus       129 d~Vl~~~p-~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i  205 (410)
                      |.|++..- .|+ .+.++.+++|+++..++.  +.+....++.+.+.+.++  +..++++++....||+   ..+ +..+
T Consensus        93 d~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~--~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV---~q~~~~~~  165 (385)
T KOG2862|consen   93 DNVLVVSTGTWGQRAADCARRYGAEVDVVEA--DIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGV---LQDLLAIS  165 (385)
T ss_pred             CeEEEEEechHHHHHHHHHHhhCceeeEEec--CcccCccHHHHHHHHHhc--CCceEEEEecCccccc---cchHHHHH
Confidence            99998664 554 346788899999999976  556678899999999985  5556666667788898   555 5666


Q ss_pred             HHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHHHH
Q 015283          206 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQL  284 (410)
Q Consensus       206 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~  284 (410)
                      -++|++|+.++++|.+ +.++..+...|.|++        ++.+.+| -|++|. +|+  +-   ++.++...++++...
T Consensus       166 g~lc~k~~~lllVD~V-aSlggt~F~mDewgV--------DvaytgS-QKaL~aP~GL--si---isfS~ka~~~~~~rK  230 (385)
T KOG2862|consen  166 GELCHKHEALLLVDTV-ASLGGTEFEMDEWGV--------DVAYTGS-QKALGAPAGL--SI---ISFSDKALEAIRDRK  230 (385)
T ss_pred             HHHhhcCCeEEEEech-hhcCCccceehhhcc--------cEEEecc-hhhcCCCCCc--ce---eecCHHHHHHHhhcc
Confidence            7789999999999999 666644344455542        4555555 577754 443  33   445777667766543


Q ss_pred             Hhhc---------c---------Cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          285 KRLA---------R---------PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       285 ~~~~---------~---------~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      .+..         .         ..|. ++|......+...|     ....++.+++..++.++..+++...|+ +.|++
T Consensus       231 ~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL-----~~I~eeGL~~~~~rH~e~s~~l~~~l~-~~GLq  304 (385)
T KOG2862|consen  231 TKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAAL-----ALIAEEGLENSWRRHREMSKWLKLSLE-ALGLQ  304 (385)
T ss_pred             CCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcc
Confidence            3110         0         1122 23333222222222     222355678888999999999999999 88863


Q ss_pred             CCcccc---cCC-cceeeecCCCHH-HHHHhhhcCcEEEcCC-----C---eEEecC--CCcccHHHHHHHHHHHhhhc
Q 015283          346 KDWSFI---LRQ-IGMFSFTGLNKA-QSDNMTNKWHVYMTKD-----G---RISLAG--LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~~~~---~~~-~~~~~~~~~~~~-~~~~ll~~~gi~v~~~-----g---Ris~~~--~~~~~i~~~~~~l~~~l~~~  409 (410)
                      -.....   .+. .+.-+-.+.++. .+..++.++++.+..|     |   ||.+.+  .+.+.++..++.|+..+...
T Consensus       305 ~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~  383 (385)
T KOG2862|consen  305 LFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK  383 (385)
T ss_pred             ceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence            211111   111 111111244654 4667777667776554     2   998543  37799999999999988754

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.67  E-value=5.4e-14  Score=136.33  Aligned_cols=334  Identities=13%  Similarity=0.061  Sum_probs=183.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...||+..+ .....|+.  +|.+.+++.+++... +.....+.....++.+.+++.....      .+.+.+  +++|+
T Consensus        72 ~~ylD~~g~-~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~sGs  140 (459)
T PRK06082         72 KKYMDFHGN-NVHQLGYG--HPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGE------LNRVLF--APGGT  140 (459)
T ss_pred             CEEEEcccH-hhcccCCC--CHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCC------CCEEEE--CCCcH
Confidence            356776522 21234543  588999888887542 1111112334446666666653221      367889  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhCCC------------CccceeeecC--CCcc-------cChhhH
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDP--KTVG-------LDFEGM  170 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~--~~~~-------~d~~~l  170 (410)
                      +|++.+.++.+.+....+|+....+|.+... .+...|.            .+..+|....  ..+.       -+++.+
T Consensus       141 eAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  220 (459)
T PRK06082        141 SAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYL  220 (459)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHH
Confidence            9999998888777655788888887765532 2221221            1112221000  0010       013456


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      ++.+.+. +...++++...++..+.+.+.+-++++.++|++||+++|.||++.+|+-.   ...+....+ +..++++  
T Consensus       221 ~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRt---G~~fa~e~~-gv~PDiv--  293 (459)
T PRK06082        221 EYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRT---GEWFTHQAY-GIEPDIL--  293 (459)
T ss_pred             HHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---chhhHhHhh-CCCCCEE--
Confidence            6666542 34556665555655444566677999999999999999999999887632   223333222 2234444  


Q ss_pred             ecccccccccC-CCcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHHH---HHhCChhhHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       251 ~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~~~~~~~~~~  325 (410)
                       .++|.++ .| +.+|.+++   ++++.+.    ... ....++. .+.++..++.   ..+.++           ...+
T Consensus       294 -~~gKgl~-gG~~P~~av~~---~~~i~~~----~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~-----------~l~~  352 (459)
T PRK06082        294 -CIGKGLG-GGLVPIAAMIT---KDKYNTA----AQISLGHYTHE-KSPLGCAAALATIEVIEQE-----------GLLE  352 (459)
T ss_pred             -Eeccccc-CCCCcceEEEE---cHHHHhh----ccCCCCCCCCC-cCHHHHHHHHHHHHHHHhc-----------CHHH
Confidence             3899998 56 58888744   5553222    111 1112232 3333333333   333222           2344


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCc-ccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCC-C---eEEe
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDW-SFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKD-G---RISL  387 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~-g---Ris~  387 (410)
                      +.+++.++|.+.|+ ++....++ ..+... |.+.-+.+         .    ..+...+++ .||.+.+. +   |++.
T Consensus       353 ~~~~~g~~l~~~L~-~l~~~~~~i~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~~i~~~P  429 (459)
T PRK06082        353 KVKADSQFMRERLL-EMKAKYPLIGDVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVSQGNVIQLSP  429 (459)
T ss_pred             HHHHHHHHHHHHHH-HHHhhCCCeeeeeec-cceeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEecCCCEEEEeC
Confidence            55555555655555 43211111 112223 33322211         0    122345554 69998875 3   6764


Q ss_pred             cC-CCcccHHHHHHHHHHHhhhc
Q 015283          388 AG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       388 ~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +. +++++++++++++.+++.++
T Consensus       430 pl~it~~eid~~~~~l~~~l~~~  452 (459)
T PRK06082        430 PLIITREELTQALAILEEAIAKI  452 (459)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHH
Confidence            42 59999999999999998653

>PRK06148 hypothetical protein; Provisional

Probab=99.67  E-value=1.9e-14  Score=151.57  Aligned_cols=337  Identities=12%  Similarity=0.073  Sum_probs=190.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|..  ..|+.  +|++.+++.+++... ....| ......++.+.+++.+...      .+.+.|  +++|+
T Consensus       624 ~~ylD~~~g~~--~lGH~--hp~v~~Ai~~q~~~l~~~~~~-~~~~~~~lAe~L~~~~p~~------~~~v~f--~nSGs  690 (1013)
T PRK06148        624 RAYLDCFNNVC--HVGHA--HPRVVAAAARQAARLNTNTRY-LHDAIVAYAERLTATLPDG------LTVAFF--VNSGS  690 (1013)
T ss_pred             CEEEEcccChh--hcCCC--CHHHHHHHHHHHhhcCCcCCc-CCHHHHHHHHHHHHhCCCC------cCEEEE--eCCcH
Confidence            45678877753  45655  588999988877542 22333 2333445666666553221      257888  89999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCC------------CCccceeeec--CCCcc-cC-------hhh
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYD--PKTVG-LD-------FEG  169 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~--~~~~~-~d-------~~~  169 (410)
                      +|++.+.++.+.+....+|+..+.+|.+.... +...+            ..+..++..+  ...+. .+       .+.
T Consensus       691 EA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  770 (1013)
T PRK06148        691 EANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAES  770 (1013)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHH
Confidence            99999999888776667899888877665322 11111            0111111100  00011 01       133


Q ss_pred             HHHHHh---cCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          170 MIADIK---AAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       170 l~~~i~---~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      +++.+.   ..+....++++-..+.-.|.+. +.+-++++.++|++||+++|.||++.+|+-.+  ...+....+ +-.+
T Consensus       771 l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG--~~~~a~e~~-gv~P  847 (1013)
T PRK06148        771 VAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVG--SHWWAFETQ-GVVP  847 (1013)
T ss_pred             HHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCC--Ccchhhhhc-CCCc
Confidence            444443   2234566666555555566655 55559999999999999999999999886321  112333222 2223


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~  322 (410)
                      +++   +++|.+| .|+.+|.+++   ++++.+.+...  ....+++. ...++..++   ...++++           .
T Consensus       848 Div---t~gK~lg-gG~Plgav~~---~~ei~~~~~~g--~~~~~Tf~-gnpla~aaa~a~L~~i~~e-----------~  906 (1013)
T PRK06148        848 DIV---TMGKPIG-NGHPMGAVVT---TREIADSFDNG--MEYFNTFG-GNPVSCAIGLAVLDIIEDE-----------D  906 (1013)
T ss_pred             cee---eeccccc-CCcceEEEEE---cHHHHhhccCC--CccccCCC-CCHHHHHHHHHHHHHHhhc-----------c
Confidence            444   6799998 7899999755   67755544221  11223333 333333433   3333333           3


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCCC------
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKDG------  383 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~g------  383 (410)
                      ..++.++..++|.+.|+ ++....++.......|.+.-+.+         .    ..+..++++ +||++.+.|      
T Consensus       907 l~~~~~~~G~~l~~~L~-~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g~~~~vl  984 (1013)
T PRK06148        907 LQRNALEIGNYLLAGLR-ELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARE-RGILIGTEGPHDNVL  984 (1013)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHh-CCeEEeccCCCCCEE
Confidence            33455555555555555 43211111111223333322211         1    123445555 699998754      


Q ss_pred             eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          384 RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ||..+. +|++++++++++|.+++.++
T Consensus       985 r~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148        985 KIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred             EEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence            665442 49999999999999998764

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.66  E-value=9.6e-15  Score=137.53  Aligned_cols=316  Identities=12%  Similarity=0.005  Sum_probs=185.7

Q ss_pred             CcccccHHHHHHHHHhhcc----CC----CccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLER----GE----NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA  118 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~----~~----~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~  118 (410)
                      |+..+|+.|++++...+..    +.    ..+..+  ..-..+.++.+++++...     +...+++ -+.+|+++.+.+
T Consensus        10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-----~~~~v~~-~~gsgt~~~Ea~   83 (360)
T PRK05355         10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-----DNYKVLF-LQGGASLQFAMV   83 (360)
T ss_pred             CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCcEEEE-EcCCchHHHHHH
Confidence            5666789999998876521    00    011211  123456777777775431     1234544 157778889888


Q ss_pred             HHHHHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHH-HHhcCCCCcEEEEeCCCCCCCCC
Q 015283          119 AALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIA-DIKAAPGGSFILLHGCAHNPTGI  195 (410)
Q Consensus       119 ~~~~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~~~~~~ii~~~p~NPtG~  195 (410)
                        +.+.+.+||++++..-+..+.  .++++.+|.. ..+...+.+ ...+..++++ .+++   ++.++.+++..|.||+
T Consensus        84 --~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~-g~~~~~~~~~~~l~~---~~~~V~~th~eTstGv  156 (360)
T PRK05355         84 --PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDD-GFTYIPPLDEWQLSD---DAAYVHYTSNETIDGT  156 (360)
T ss_pred             --HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEeccccc-CCCCCCChhhccCCC---CCCEEEEccCCCcceE
Confidence              667778999988877655443  4577788854 444432112 2344455555 5543   4566777888899999


Q ss_pred             CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283          196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD  275 (410)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~  275 (410)
                      ..+  ++.+|      +|+++++|.+ +.++..+.+.+         ..+  +++.|..|.+|++|+  |.+++   +++
T Consensus       157 ~~~--~i~~i------~g~l~vVDav-ss~g~~~idv~---------~~d--~~~~ssqK~lgP~Gl--g~l~~---s~~  211 (360)
T PRK05355        157 EFH--ELPDT------GDVPLVADMS-SDILSRPIDVS---------KFG--LIYAGAQKNIGPAGL--TIVIV---RED  211 (360)
T ss_pred             ecC--ccccc------CCCcEEEEcC-ccccCccCCHH---------Hcc--EEEEeccccccCCce--EEEEE---CHH
Confidence            764  34444      8999999999 55553222211         112  778888999998875  77655   777


Q ss_pred             hHHHHHHHHH------h-hccC-cccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283          276 LAARVKSQLK------R-LARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       276 ~~~~~~~~~~------~-~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~  346 (410)
                      .++++.....      . .... +..+|+.....++...|+.-     ..+ .++++.++.+++.+++.+.|+ ++++-.
T Consensus       212 ~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i-----~~~gG~e~i~~r~~~l~~~l~~~l~-~~~~~~  285 (360)
T PRK05355        212 LLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWL-----KEQGGVAAMEKRNQEKAALLYDAID-SSDFYR  285 (360)
T ss_pred             HHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHH-----HHccCHHHHHHHHHHHHHHHHHHHH-hCCCcc
Confidence            6665433100      0 1111 22344444433333333311     022 357888999999999999999 887411


Q ss_pred             CcccccCCc-ceeee--cCC-CHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          347 DWSFILRQI-GMFSF--TGL-NKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       347 ~~~~~~~~~-~~~~~--~~~-~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+......+ +...+  .+. ..+.+...+.+.|+.+.++    |  |+|+.. .|.+|++.+++.|++++++
T Consensus       286 ~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~  358 (360)
T PRK05355        286 NPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR  358 (360)
T ss_pred             cCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            111000111 22222  221 1123323334469988555    3  999765 4899999999999998765

>PRK06149 hypothetical protein; Provisional

Probab=99.66  E-value=2.1e-14  Score=151.16  Aligned_cols=336  Identities=13%  Similarity=0.079  Sum_probs=188.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|..  ..|+.  +|++.+++.+++.... ...| ......++.+.+++.+...      .+.+.+  +++|+
T Consensus       585 ~~ylD~~~~~~--~lGh~--hp~v~~Ai~~q~~~l~~~~~~-~~~~~~elae~L~~~~p~~------~~~v~f--~~SGs  651 (972)
T PRK06149        585 RSYLDMVNNVT--VLGHG--HPRLAAAAARQWSLLNTNSRF-HYAAVAEFSERLAALAPDG------LDTVFL--VNSGS  651 (972)
T ss_pred             CEEEECCCCcc--ccCCC--CHHHHHHHHHHHHhccccccc-cCHHHHHHHHHHHHhCCCC------cCEEEE--eCCch
Confidence            56788887753  44544  5888888888775422 1223 2233456666666664221      357888  89999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-hhCC----------C---CccceeeecC--CCcc-cC-----hhhH
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDAR----------V---PWSEYRYYDP--KTVG-LD-----FEGM  170 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-~~~g----------~---~~~~v~~~~~--~~~~-~d-----~~~l  170 (410)
                      +|++.+.++.+.+....+|+..+-+|.+..... ...+          .   .+..++..+.  ..+. .+     .+++
T Consensus       652 EA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~  731 (972)
T PRK06149        652 EANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDV  731 (972)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence            999999888877766678888887776543111 0000          0   0111211100  0011 11     2333


Q ss_pred             HHHHh---cCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          171 IADIK---AAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       171 ~~~i~---~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      ++.+.   ..+....++++-..+...|.+ ++..-++++.++|++||+++|.||++.+|+-.+  ...+.+..+ +..++
T Consensus       732 ~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG--~~~~a~e~~-gv~PD  808 (972)
T PRK06149        732 VAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG--HYFWGFEQQ-GVVPD  808 (972)
T ss_pred             HHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC--ccchhhhhc-CCCCC
Confidence            33332   223455666655555555654 455559999999999999999999988886421  112333222 22234


Q ss_pred             EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH---HHhCChhhHHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~~~~~~~~  323 (410)
                      ++   +++|.+| .|..+|++++   ++++.+.+...  ....+++ +.+.++..++.   ..++++           ..
T Consensus       809 iv---t~gK~lg-~G~Pl~av~~---~~~i~~~~~~~--~~~~sT~-~gnP~~~aaala~L~~i~~e-----------~l  867 (972)
T PRK06149        809 II---TMAKGMG-NGHPLGAVIT---RREIAEALEAE--GYFFSST-GGSPVSCRIGMAVLDVLREE-----------KL  867 (972)
T ss_pred             EE---Eeccccc-CCeeeEEEEE---cHHHHhhhccC--CcccCCC-CCCHHHHHHHHHHHHHHHhc-----------CH
Confidence            44   7899998 6888999755   77755544321  1222333 23333334443   333332           33


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCCC------e
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKDG------R  384 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~g------R  384 (410)
                      .++.++..++|.+.|+ ++....++.......|.+.-+.+         .    ..+..++++ +||++.+.|      |
T Consensus       868 ~~~~~~~G~~l~~~L~-~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~~~~g~~~~vl~  945 (972)
T PRK06149        868 QENARRVGDHLKARLE-ALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIMQPTGDHLNILK  945 (972)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEEeecCCCCCEEE
Confidence            4455555555666555 44211111112223343322211         1    123455555 699998865      5


Q ss_pred             EEec-CCCcccHHHHHHHHHHHhhh
Q 015283          385 ISLA-GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       385 is~~-~~~~~~i~~~~~~l~~~l~~  408 (410)
                      |..+ ..+++++++++++|.+++.+
T Consensus       946 ~~Ppl~it~~~id~~~~~l~~~l~~  970 (972)
T PRK06149        946 IKPPLCLDRESADFFVDMLDRVLTE  970 (972)
T ss_pred             EECCCcCCHHHHHHHHHHHHHHHHh
Confidence            5433 24999999999999999875

>PRK06917 hypothetical protein; Provisional

Probab=99.66  E-value=4.8e-14  Score=136.37  Aligned_cols=342  Identities=11%  Similarity=0.033  Sum_probs=184.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc---cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++......   .| ......++.+.+++.+...      .+.+.+  +++
T Consensus        31 ~~ylD~~~g~~~~~lGh~--hp~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~~s   99 (447)
T PRK06917         31 NKYFDGSSGAVTAGIGHG--VKEIADAIKEQAEEVSFVYRSQF-TSEPAEKLAKKLSDLSPGD------LNWSFF--VNS   99 (447)
T ss_pred             CEEEECchhHHhccCCCC--CHHHHHHHHHHHhhCcCcccccc-CCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence            567898877542345554  588898888887552111   12 2222345555555553211      257888  999


Q ss_pred             hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhh-hhCCC------------CccceeeecCCCc--------
Q 015283          111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPKTV--------  163 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~-~~~g~------------~~~~v~~~~~~~~--------  163 (410)
                      |++|++.+.++.+.+.     +| .+|+..+.+|.+..... ...+.            .+..++.......        
T Consensus       100 GsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  179 (447)
T PRK06917        100 GSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPT  179 (447)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHH
Confidence            9999999988776541     33 67888888886654322 21111            0111111000000        


Q ss_pred             --ccChhhHHHHHhcCC-CCcEEEEeCCCCC-CCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          164 --GLDFEGMIADIKAAP-GGSFILLHGCAHN-PTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       164 --~~d~~~l~~~i~~~~-~~~~~ii~~~p~N-PtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                        .-+++.+++.+.... +...++++...+. .-|.. .+.+-++++.++|++||+++|.||++.+|+-.   ...+...
T Consensus       180 ~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRt---G~~~a~~  256 (447)
T PRK06917        180 CQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRT---GAMFAME  256 (447)
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcc---cchhhHH
Confidence              012456666776432 2455555444343 34454 45666999999999999999999999887522   2222222


Q ss_pred             HHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhh-ccCcccCCChhHHHHHHHHhCChhhHHHH
Q 015283          239 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDEW  316 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~  316 (410)
                      . .+..++++   +++|.++ .|. .+|.+++   ++++.+.+...-... ...++ +.+.++..++...|+--      
T Consensus       257 ~-~gv~PDi~---~~gK~l~-~G~~Pi~a~~~---~~~i~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~l~~l------  321 (447)
T PRK06917        257 H-WGVEPDIM---TLGKGLG-AGYTPIAATVV---SDRVMEPILRGSRSIMSGHTL-SANPLSAATALAVLEYM------  321 (447)
T ss_pred             h-cCCCCCEE---Eeeehhc-cCCcceEEEEE---cHHHHHHHhccCcccccccCC-CCCHHHHHHHHHHHHHH------
Confidence            2 22233444   6799998 675 7888754   777555443211111 11223 23333334443333210      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------------CHHHHHHhhhcCcEEEc
Q 015283          317 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------------NKAQSDNMTNKWHVYMT  380 (410)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ll~~~gi~v~  380 (410)
                      .+  +...++++++.++|.+.|+ ++....++.......|.+.-+.+                ...+...+++ +||.+.
T Consensus       322 ~~--~~l~~~~~~~g~~l~~~L~-~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~  397 (447)
T PRK06917        322 EK--HNLPEKAAEKGEYLIKGLQ-KVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAK-NGLLLY  397 (447)
T ss_pred             HH--CCHHHHHHHHHHHHHHHHH-HHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHh-CCcEEE
Confidence            00  1233455555555555555 43211111111122233322111                0122445555 699997


Q ss_pred             CC--------C---eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283          381 KD--------G---RISLA-GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       381 ~~--------g---Ris~~-~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +.        +   |++.+ ..|++++++++++|.+++.+
T Consensus       398 ~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~  437 (447)
T PRK06917        398 PAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEE  437 (447)
T ss_pred             ecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence            64        2   67644 24999999999999999865

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.66  E-value=5.8e-15  Score=137.61  Aligned_cols=324  Identities=16%  Similarity=0.184  Sum_probs=174.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc------CCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .-|+|-..++       +++|.+++++...+.+....+|+      ...-++++.+...+.....++.. ..++-+-++.
T Consensus        21 ~~l~LiaSEN-------~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~-~~~w~anvqp   92 (399)
T PF00464_consen   21 STLNLIASEN-------YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE-PKEWYANVQP   92 (399)
T ss_dssp             HSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S-TTTEEEE---
T ss_pred             cCccccCccc-------ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC-cccceEEeec
Confidence            4578876654       23799999887666443323332      12222333332223222223322 1234555678


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh---h-----C--CCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN---D-----A--RVPWSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~---~-----~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      .+|+.|+..+  +.+.+.|||+|+..++..+++.+.-.   .     .  ..+.+.+++. ++++.+|.+++++.+.+. 
T Consensus        93 ~SGs~An~av--~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d-~~~~~ID~d~l~~~a~~~-  168 (399)
T PF00464_consen   93 HSGSQANLAV--YMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD-PDTGLIDYDELEKLAKEH-  168 (399)
T ss_dssp             SSHHHHHHHH--HHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHHHHHH-
T ss_pred             CCchHHHHHH--HHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeee-cCCCeECHHHHHHHHhhc-
Confidence            8999999887  56668899999999987776643221   1     1  2345556663 467889999999998874 


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       ++++|++..-..|-     .-+++++.++|++.|.+|+.|-++. ++..++.-+.  ++      ...+++.+|..|+|
T Consensus       169 -kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~--P~------~~ADvvt~sThKtl  234 (399)
T PF00464_consen  169 -KPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPN--PF------PYADVVTGSTHKTL  234 (399)
T ss_dssp             ---SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS----GC------CTSSEEEEESSGGG
T ss_pred             -CCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecC--cc------ccceEEEeeccccc
Confidence             45566654434333     4568888888999999999999964 2332211111  11      12568899999997


Q ss_pred             cccCCCcceEEEEeC-------------CchhHHHHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCS-------------SSDLAARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~  323 (410)
                        +|-|-|.+  .++             +++    +.+.+....++...+.+.....++ +..+.+     ....+.+++
T Consensus       235 --~GPrggiI--~~~~~~~~~~~~~~~~~~~----l~~~I~~avfP~~qg~~h~~~iaalAval~e-----a~~~~fk~Y  301 (399)
T PF00464_consen  235 --RGPRGGII--LTNKGSKNVDKKGKEIDEE----LAEKIDSAVFPGLQGGPHMHRIAALAVALKE-----ALSPEFKEY  301 (399)
T ss_dssp             ---SSS-EEE--EES-SEEEE-TTS-EEEHH----HHHHHHHHHTTTT-SS--HHHHHHHHHHHHH-----HTSHHHHHH
T ss_pred             --cccCceEE--EEcCCccccCCcccccHHH----HHHHhccccCCCcccCcchhHHHHHHHHHhc-----ccCHHHHHH
Confidence              68887776  344             255    444455555543333333222222 222221     112234688


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCc-ceeeecC-----CCHHHHHHhhhcCcEEEc----CC--------C-e
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI-GMFSFTG-----LNKAQSDNMTNKWHVYMT----KD--------G-R  384 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~ll~~~gi~v~----~~--------g-R  384 (410)
                      .++..++.+.|.+.|. +.|+    .+....+ ...+|++     ++...+.+.|++.||.+.    |+        | |
T Consensus       302 a~qVv~NAk~La~~L~-~~G~----~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlR  376 (399)
T PF00464_consen  302 AKQVVKNAKALAEALQ-ERGF----KVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLR  376 (399)
T ss_dssp             HHHHHHHHHHHHHHHH-HTT-----EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEE
T ss_pred             HHHHHHHHHHHHHHHh-hCCc----EEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEE
Confidence            8899999999999999 8884    4443333 3335654     356778888899999884    22        3 8


Q ss_pred             EEec-----CCCcccHHHHHHHH
Q 015283          385 ISLA-----GLSLAKCEYLADAI  402 (410)
Q Consensus       385 is~~-----~~~~~~i~~~~~~l  402 (410)
                      |+..     ++.+++++++.+.|
T Consensus       377 lGT~~lT~rG~~e~dm~~iA~~I  399 (399)
T PF00464_consen  377 LGTPALTRRGMKEEDMKEIAELI  399 (399)
T ss_dssp             EESHHHHHTT--HHHHHHHHHHH
T ss_pred             ECCHHHHhCCCCHHHHHHHHhhC
Confidence            8643     45777777776543

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.66  E-value=4.3e-14  Score=135.70  Aligned_cols=337  Identities=10%  Similarity=0.083  Sum_probs=185.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-...|+.  .|.+.+++.+++.......+  .......++.+.+++.....      .+.+.+  +++|
T Consensus        40 ~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG  109 (422)
T PRK05630         40 STVIDAMSSWWSAAHGHG--HPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNG------LDHVFY--SDSG  109 (422)
T ss_pred             CEEEEcchhHHHhcCCCC--CHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCC------cCEEEE--eCCc
Confidence            567898887553345665  58889888888754211111  12223345666666553211      357888  9999


Q ss_pred             hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhh-hhhCCC-------------CccceeeecCCCcc-cC----
Q 015283          112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYDPKTVG-LD----  166 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~~~~~~-~d----  166 (410)
                      ++|++.+.++.+.+.     +| .+|+....+|.+.... +...+.             ....+|........ -+    
T Consensus       110 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  189 (422)
T PRK05630        110 SVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEY  189 (422)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHH
Confidence            999999988877653     23 5788888877664322 211111             11222221100000 01    


Q ss_pred             hhhHHHHHhcCCCCcEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          167 FEGMIADIKAAPGGSFILLHGCA-HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       167 ~~~l~~~i~~~~~~~~~ii~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      .+.+++.+..   ...++++... +...|... +.+-++++.++|++||+++|+||++.+++-.   ...+.... .+..
T Consensus       190 ~~~~~~~~~~---~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~Grt---G~~~a~~~-~gv~  262 (422)
T PRK05630        190 LRSLELLIDE---TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRT---GELFATLA-AGVT  262 (422)
T ss_pred             HHHHHHHHhh---ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcC---chhhHHHh-cCCC
Confidence            1233444432   5566665552 67778765 5556999999999999999999999877532   23333222 1222


Q ss_pred             CcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH--h-hccCcccCCChhHHHHH---HHHhCChhhHHHHH
Q 015283          245 MELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK--R-LARPMYSNPPVHGARIV---ANVVGNPALFDEWK  317 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~  317 (410)
                      ++++   +++|.++ .| ..+|++++   ++++.+.+...-.  . ....++. .+.++..++   ...+.++       
T Consensus       263 PDi~---t~gK~l~-gG~~p~~av~~---~~~i~~~~~~~~~~~~~~h~~T~~-g~Pla~aaa~aaL~~l~~~-------  327 (422)
T PRK05630        263 PDIM---CVGKALT-GGFMSFAATLC---TDKVAQLISTPNGGGALMHGPTFM-ANPLACAVAHASLEIIETG-------  327 (422)
T ss_pred             CCee---eeechhh-cCccccceeec---cHHHHHHHhccCCCCccccCCCCc-CCHHHHHHHHHHHHHHHhC-------
Confidence            3444   7899986 46 46788644   7775554432100  0 1122333 333333333   3333332       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC---eEEecC
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RISLAG  389 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g---Ris~~~  389 (410)
                          ..+++++++.+++.+.|+ ++.....+..+ ...|.+.-+.+    .. .+...+++ +|+++.+.|   ||..+-
T Consensus       328 ----~~~~~~~~~g~~l~~~L~-~l~~~~~v~~v-Rg~Gl~~~ie~~~~~~~~~~~~~~~~-~Gl~~~~~g~~l~~~PpL  400 (422)
T PRK05630        328 ----MWRKQVKRIEAELIAGLS-PLAHLPGVADV-RVLGAIGVVEMEQPVDMEEATQAAVD-HGVWLRPFGRLVYVMPPY  400 (422)
T ss_pred             ----cHHHHHHHHHHHHHHHHH-HhhcCCCeeee-eccccEEEEEECCcccHHHHHHHHHH-CCeEEEecCCEEEEECCc
Confidence                223355555555555554 43210001112 22233322222    22 33455555 699998876   666442


Q ss_pred             -CCcccHHHHHHHHHHHhhhc
Q 015283          390 -LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 -~~~~~i~~~~~~l~~~l~~~  409 (410)
                       .|++++++++++|++++.+.
T Consensus       401 ~it~~~i~~~~~~l~~al~~~  421 (422)
T PRK05630        401 ITTSEQIAQICAALAAAVKAK  421 (422)
T ss_pred             cCCHHHHHHHHHHHHHHHhcc
Confidence             49999999999999998753

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.66  E-value=1.3e-14  Score=138.04  Aligned_cols=308  Identities=13%  Similarity=0.023  Sum_probs=178.8

Q ss_pred             ccHH-HHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC-ChhhHHHHHHHHHHHhCC-CC
Q 015283           53 VLDV-VKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL-SGTGSLRLAAALIERYFP-GA  129 (410)
Q Consensus        53 ~~~~-v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~-ggt~a~~~~~~~~~~~~~-gd  129 (410)
                      +++. |.+++........+....-..-+.+.|+.+++++...     ++++|++  +. +||++++.+.  .+.+.+ ++
T Consensus        23 ~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~-----~~~~v~~--~~gs~T~~~~~~~--~~l~~~~~~   93 (378)
T PRK03080         23 KRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLP-----EGYEVGI--VPGSDTGAWEMAL--WSLLGARRV   93 (378)
T ss_pred             CChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCC-----CCceEEE--ECCchHHHHHHHH--HhcCCCCcc
Confidence            4667 9998876543211011111334568888888886532     1346877  64 8999999983  444554 44


Q ss_pred             EEEEcCCCCcchhh--hhhhCCC-CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          130 KVLISSPTWGNHKN--IFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       130 ~Vl~~~p~y~~~~~--~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      .|+. .-.|+....  ..+.+|. +++.++.  +++..+|++++.    .    +.++.+++.+|.||...+.   ++|+
T Consensus        94 ~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~--~~g~~~d~~~i~----~----~~~V~~~h~~t~tG~~~pi---~~I~  159 (378)
T PRK03080         94 DHLA-WESFGSKWATDVVKQLKLEDPRVLEA--DYGSLPDLSAVD----F----DRDVVFTWNGTTTGVRVPV---ARWI  159 (378)
T ss_pred             eEEE-eCHHHHHHHHHHHhhcCCCCceEecc--CCCCCCCHhhcC----C----CCCEEEEecCCccceeccc---hhhc
Confidence            5544 445554322  2356788 8888876  344556766532    1    2235667889999997764   4555


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHHH-
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQL-  284 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~-  284 (410)
                      +  +++|+++++|.+ +.++..+.+     +..      .++++.|..|.++ ++|  +|++++   +++.++++.... 
T Consensus       160 ~--~~~g~~~vVDa~-qs~G~~pid-----v~~------iD~~~~s~~K~l~~P~G--~g~l~v---~~~~~~~~~p~~~  220 (378)
T PRK03080        160 G--ADREGLTICDAT-SAAFALPLD-----WSK------LDVYTFSWQKVLGGEGG--HGMAIL---SPRAVERLESYTP  220 (378)
T ss_pred             c--ccCCCeEEEecc-cccccCCCC-----HHH------CcEEEEehhhhCCCCCc--eEEEEE---CHHHHHhhhcccC
Confidence            5  678999999999 555532222     111      3678888899885 366  577766   777776654311 


Q ss_pred             -----------------HhhccC-cccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          285 -----------------KRLARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       285 -----------------~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                                       ...... +..+++..+..++...|+.   .  ... .+++++++.+++.+++.+.++ +++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~---l--~~~gG~e~i~~r~~~l~~~l~~~l~-~~~~~  294 (378)
T PRK03080        221 ARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDW---A--NSIGGLDALIARTAANASVLYDWAE-KTPWA  294 (378)
T ss_pred             CCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHH---H--HHcCCHHHHHHHHHHHHHHHHHHHH-hCCCc
Confidence                             000011 1122333332222222221   0  011 246778888999999999998 87631


Q ss_pred             CCccccc-CCc-ceeee-c-C----CCHHHHHHhhhcCcEEEcCC------C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          346 KDWSFIL-RQI-GMFSF-T-G----LNKAQSDNMTNKWHVYMTKD------G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       346 ~~~~~~~-~~~-~~~~~-~-~----~~~~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      ..+...+ ..+ +...+ + +    .+.++..+++++ |+.+..|      +  |+|+.. .++++++.+++.|++++++
T Consensus       295 ~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~  373 (378)
T PRK03080        295 TPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFER  373 (378)
T ss_pred             ccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence            1111011 112 23332 2 2    223456666665 7776542      2  999664 4889999999999998876


Q ss_pred             c
Q 015283          409 V  409 (410)
Q Consensus       409 ~  409 (410)
                      +
T Consensus       374 ~  374 (378)
T PRK03080        374 L  374 (378)
T ss_pred             H
Confidence            4

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.66  E-value=4.7e-14  Score=132.97  Aligned_cols=214  Identities=12%  Similarity=0.031  Sum_probs=141.3

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~  151 (410)
                      .+....|.+.++++-..        +..++  +++|+.|+..+  ++..+.+||+|+++...|.+....+    +..|.+
T Consensus        61 nPt~~~le~~la~LEg~--------~~a~~--~~SGmaAi~~~--~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~  128 (395)
T PRK08114         61 TLTHFSLQEAMCELEGG--------AGCAL--YPCGAAAVANA--ILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVT  128 (395)
T ss_pred             ChhHHHHHHHHHHHhCC--------CeEEE--EhHHHHHHHHH--HHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcE
Confidence            44567888999987322        34444  68899999987  4556889999999999998776554    567888


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc--CCcccccccCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGS  229 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~~  229 (410)
                      +..++.       .|.+.+++.+++   +++++++.+|.||||.+.   ++++|+++|+++  |+++++|.++.....  
T Consensus       129 v~~vd~-------~d~~~l~~~l~~---~TrlV~~EtpsNp~~~v~---DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~--  193 (395)
T PRK08114        129 TTWFDP-------LIGADIAKLIQP---NTKVVFLESPGSITMEVH---DVPAIVAAVRSVNPDAVIMIDNTWAAGVL--  193 (395)
T ss_pred             EEEECC-------CCHHHHHHhcCC---CceEEEEECCCCCCCEee---cHHHHHHHHHHhCCCCEEEEECCCccccc--
Confidence            777754       367888888875   688888899999999955   577788889997  499999999764321  


Q ss_pred             CCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283          230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~  308 (410)
                      .  ++.       ..+.++++.|.+|.++-+| ...|.+   +.+++..+++.....    ..-...+......+.+-|+
T Consensus       194 ~--~pl-------~~GaDivv~S~tKyl~Ghsdv~~G~v---~~~~~~~~~l~~~~~----~~G~~~~p~~a~l~~rgl~  257 (395)
T PRK08114        194 F--KAL-------DFGIDISIQAGTKYLVGHSDAMIGTA---VANARCWEQLRENSY----LMGQMVDADTAYMTSRGLR  257 (395)
T ss_pred             c--CHH-------HcCCcEEEEcCcccccCCCcceeEEE---EcCHHHHHHHHHHHH----hccCCCCHHHHHHHHcCCC
Confidence            1  111       2246899999999886555 444543   335665454443222    1222334433333444444


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .-          .-..++..++...+.+.|+ +.+
T Consensus       258 TL----------~lR~~~~~~na~~va~~L~-~hp  281 (395)
T PRK08114        258 TL----------GVRLRQHEESSLKVAEWLA-EHP  281 (395)
T ss_pred             cH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence            33          2333455556666777776 654

>PRK07480 putative aminotransferase; Validated

Probab=99.66  E-value=4.9e-14  Score=136.53  Aligned_cols=340  Identities=13%  Similarity=0.085  Sum_probs=183.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|..-...|+.  .|.+.+++.+++... +...+  .+.....++.+.+++.+...      .+.+.+  +++
T Consensus        50 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S  119 (456)
T PRK07480         50 NKILDGMAGLWCVNVGYG--RKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPG------FNHVFF--TNS  119 (456)
T ss_pred             CEEEEccchHHHhcCCCC--CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCC
Confidence            467888877532344554  588888888877542 11111  12233345555555553211      357888  999


Q ss_pred             hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCC------------Cccceeeec--CCCcccC---
Q 015283          111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYD--PKTVGLD---  166 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~--~~~~~~d---  166 (410)
                      |++|++.+.++.+.+.     +| .+|+...-+|.+..- .+...|.            .+..++...  ...+..+   
T Consensus       120 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  199 (456)
T PRK07480        120 GSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEE  199 (456)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHH
Confidence            9999999988887652     33 468887777765432 1111111            011111100  0000001   


Q ss_pred             -----hhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          167 -----FEGMIADIKA-APGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       167 -----~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                           .+.+++.+.+ .++...++++...+.-.|...++++ ++++.++|++||+++|.||++.+|+-.   ...+....
T Consensus       200 ~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~a~~~  276 (456)
T PRK07480        200 FGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRT---GEWFGSQH  276 (456)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---cchhhhhh
Confidence                 2455544432 2345666666666666777665544 999999999999999999999888632   22333322


Q ss_pred             HhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHHHHHh---CChhhHH
Q 015283          240 FATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANVV---GNPALFD  314 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~l---~~~~~~~  314 (410)
                      + +..++++   +++|.++ .|. .+|.+++   ++++.+.+...... ....+++ .+.++..++...|   .+++   
T Consensus       277 ~-gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~~---  344 (456)
T PRK07480        277 F-GIKPDLM---TIAKGLT-SGYIPMGAVGV---GDRVAEVLIEEGGEFNHGFTYS-GHPVAAAVALANLRILRDEG---  344 (456)
T ss_pred             c-CCCCCee---eeehhhc-cCCccceEEEE---cHHHHHHHhcCCCCcccCCCCC-cCHHHHHHHHHHHHHHHhCC---
Confidence            2 2233444   6799998 574 7888754   77755544210011 1222333 3344444443333   3222   


Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----------C----HHH-HHHhhhcCcE
Q 015283          315 EWKAEMEMMAGRI-KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----------N----KAQ-SDNMTNKWHV  377 (410)
Q Consensus       315 ~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----------~----~~~-~~~ll~~~gi  377 (410)
                              ..++. ++..+++.+.|+ ++. ..++.......|.+.-+.+           .    ... ...+++ +||
T Consensus       345 --------l~~~~~~~~g~~l~~~l~-~l~-~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gl  413 (456)
T PRK07480        345 --------IVERVRDDTGPYLQKRLR-ELA-DHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA-NGL  413 (456)
T ss_pred             --------HHHHHHHHHHHHHHHHHH-Hhh-cCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHH-CCc
Confidence                    23344 244455555554 331 0111111122233322211           0    012 334454 699


Q ss_pred             EEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          378 YMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       378 ~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+.+.|   ||+.+. +|++++++++++|.+++.++
T Consensus       414 l~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~  449 (456)
T PRK07480        414 IMRAVGDRMIISPPLVITHAEIDELVEKARKALDAT  449 (456)
T ss_pred             EEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            998765   676543 49999999999999998753

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.66  E-value=6.4e-14  Score=119.36  Aligned_cols=321  Identities=16%  Similarity=0.067  Sum_probs=193.7

Q ss_pred             ccHHHHHHHHHhhccCCCccCcC--------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283           53 VLDVVKKAENLMLERGENKEYLP--------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER  124 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~--------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~  124 (410)
                      ++++.++++.+.-+..+...|..        -+-+.++.+.+++++..        +.+-+  |+|+.++-+.+.  .+.
T Consensus        29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~--------D~~R~--t~GARe~KfavM--hal   96 (382)
T COG1103          29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGM--------DEVRV--TAGAREAKFAVM--HAL   96 (382)
T ss_pred             CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCC--------ceeee--cccchhhHHHHH--HHh
Confidence            46888888877655433344431        12356788889999632        34445  999999999873  344


Q ss_pred             hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEeCCCCCCCCCCCCHH
Q 015283          125 YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPE  200 (410)
Q Consensus       125 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~~~p~NPtG~~~~~~  200 (410)
                      +.+||.|++...++-..--.++..|+++..+|......+.++++...+.|.+.    +....+.++++|....|.   ..
T Consensus        97 ~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGN---l~  173 (382)
T COG1103          97 CKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGN---LA  173 (382)
T ss_pred             ccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCC---ch
Confidence            66999999988765444446788999999999766667889988887776552    233555555555555555   88


Q ss_pred             HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283          201 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       201 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      +-++++++|+++|+.++...+|.--..+   .   +    ..+...+++++|=+|++... -.+|.+..   +.+..+.+
T Consensus       174 Dakkva~ic~e~gvPlllN~AYt~Grmp---v---s----~ke~g~DFiVgSGHKsmAAs-~PiGvl~~---~eE~ae~V  239 (382)
T COG1103         174 DAKKVAKICREYGVPLLLNCAYTVGRMP---V---S----GKEIGADFIVGSGHKSMAAS-APIGVLAM---SEEWAEIV  239 (382)
T ss_pred             hhHHHHHHHHHcCCceEeecceeecccc---c---c----ccccCCCEEEecCccchhcc-CCeeEEee---hhHHHHHH
Confidence            8999999999999999999998754421   1   1    12334678899999999755 46888765   77877776


Q ss_pred             HHHHHh-h--ccCcccCCChhHHHHHHHHhCCh---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          281 KSQLKR-L--ARPMYSNPPVHGARIVANVVGNP---ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       281 ~~~~~~-~--~~~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                      .+.-.. .  ..-...++...++-+.+.+-+-+   +-.+.|.+++++.|....+.-+.  .++. .+|.    ......
T Consensus       240 ~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEki--gg~~-qlG~----rPk~Hd  312 (382)
T COG1103         240 LRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKI--GGVK-QLGE----RPKNHD  312 (382)
T ss_pred             HhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHH-HhCC----CCcccc
Confidence            543311 0  00011122222222222222222   22333554444444433333321  1222 2221    111111


Q ss_pred             cceeeecCC---------CHHHHHHhhhcCcEEEc-CCC----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          355 IGMFSFTGL---------NKAQSDNMTNKWHVYMT-KDG----RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       355 ~~~~~~~~~---------~~~~~~~ll~~~gi~v~-~~g----Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      --.|-...+         ..-++.+-|+++||.-. ||.    .+|+.+++.|+++.+++++++++++.
T Consensus       313 Lm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky  381 (382)
T COG1103         313 LMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY  381 (382)
T ss_pred             eeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence            001111111         11133344466788754 443    67888899999999999999998864

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.65  E-value=4.6e-14  Score=136.91  Aligned_cols=341  Identities=12%  Similarity=0.023  Sum_probs=185.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC-c-cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-K-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~-~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++..... + .+.+.....++.+.+++.......   ..+.+.+ .+++|
T Consensus        63 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~---~~~~v~f-~~~SG  136 (464)
T PRK06938         63 RQFIDCLAGAGTLALGHN--HPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFA---REAKIQF-CGPTG  136 (464)
T ss_pred             CEEEEccCCccccccCCC--CHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCccccc---ccceEEE-eCCCc
Confidence            467888777543345665  58899998888753211 1 111222333455555554322110   0124544 13699


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCC------------CCccceeeecCC--Cc--------ccChh
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYDPK--TV--------GLDFE  168 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~~~--~~--------~~d~~  168 (410)
                      ++|++.+.++.+.+....+|+....+|.+.... +...|            ..+..++.....  .+        ..+++
T Consensus       137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  216 (464)
T PRK06938        137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH  216 (464)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence            999999988887765557888888877665432 21111            012223321100  00        01356


Q ss_pred             hHHHHHhcCC---CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          169 GMIADIKAAP---GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       169 ~l~~~i~~~~---~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      .+++.+.+..   +...++++-..+.-.|.+. +..-++++.++|++||+++|.||+..+|+-.   ...+.... .+-.
T Consensus       217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRt---G~~~a~e~-~gv~  292 (464)
T PRK06938        217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRT---GKMFAFEH-AGII  292 (464)
T ss_pred             HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---cHHHHHHh-cCCC
Confidence            6777776421   2456666555566567765 4666999999999999999999999998632   23333322 2233


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH---hCChhhHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEME  321 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~~~  321 (410)
                      ++++   .++|.++ .|+.+|.++.   ++++ +.+.   .....+++. ...++..++...   +.++           
T Consensus       293 PDiv---~~gKglg-gG~PlsAv~~---~~~~-~~~~---~~~~~~T~~-gnpla~Aaa~a~L~~l~~~-----------  349 (464)
T PRK06938        293 PDVV---VLSKAIG-GSLPLAVVVY---REWL-DTWQ---PGAHAGTFR-GNQMAMAAGSATLRYIKEH-----------  349 (464)
T ss_pred             CCEE---Eeecccc-CCCceEEEee---hhHh-hccC---CCCCCCCCC-cCHHHHHHHHHHHHHHHHh-----------
Confidence            4555   4699998 6899999743   4442 2221   111223333 333333444333   3322           


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------------CH----HHHHHhhhcCcEEEcCC
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------------NK----AQSDNMTNKWHVYMTKD  382 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~~ll~~~gi~v~~~  382 (410)
                      +..++.++..+++.+.|+ ++....++.......|.+.-+.+               +.    .+...+++ +|+.+.++
T Consensus       350 ~l~~~~~~~G~~l~~~L~-~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~  427 (464)
T PRK06938        350 RLAEHAAAMGERLREHLR-QLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILELG  427 (464)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEeec
Confidence            233444444455555444 33110111111222233322211               11    12445554 69998764


Q ss_pred             C------eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          383 G------RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 g------Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |      ||..+ .+|+++++++++++.+++.++
T Consensus       428 g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~  461 (464)
T PRK06938        428 GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA  461 (464)
T ss_pred             CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence            3      66533 259999999999999998753

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.65  E-value=3.9e-14  Score=133.28  Aligned_cols=216  Identities=17%  Similarity=0.171  Sum_probs=140.4

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      ......+.+.+++....        +..++  +++|+.|+..+  +++.+.+||+|+++...|++....++    ..|.+
T Consensus        54 nPt~~~le~~la~Le~g--------~~a~~--~~SGmaAi~~~--l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~  121 (386)
T PF01053_consen   54 NPTVRALEQRLAALEGG--------EDALL--FSSGMAAISAA--LLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVE  121 (386)
T ss_dssp             -HHHHHHHHHHHHHHT---------SEEEE--ESSHHHHHHHH--HHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSE
T ss_pred             cccHHHHHHHHHHhhcc--------cceee--ccchHHHHHHH--HHhhcccCCceEecCCccCcchhhhhhhhcccCcE
Confidence            34557888899888433        34555  79999999887  56668899999999999998876665    45666


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC-CcccccccCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-HIPFFDVAYQGFASGSL  230 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~-~~li~Deay~~~~~~~~  230 (410)
                      +..++.       -|++++++.+++   ++.++++.+|.||+..   ..++++|+++|+++| +++|+|+.+.....-  
T Consensus       122 v~~~d~-------~d~~~l~~~l~~---~t~~v~~EspsNP~l~---v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~--  186 (386)
T PF01053_consen  122 VTFVDP-------TDLEALEAALRP---NTKLVFLESPSNPTLE---VPDLEAIAKLAKEHGDILVVVDNTFATPYNQ--  186 (386)
T ss_dssp             EEEEST-------TSHHHHHHHHCT---TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC--
T ss_pred             EEEeCc-------hhHHHHHhhccc---cceEEEEEcCCCcccc---cccHHHHHHHHHHhCCceEEeeccccceeee--
Confidence            666543       378999999986   8889999999999987   567788888899998 999999998654321  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC-chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS-SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                        +  ++     ..+.++++.|.+|.++-.|--+|.++ ++++ +++.++++....    ......+......+.+-|+.
T Consensus       187 --~--pL-----~~GaDivv~S~TKyl~Ghsdv~~G~v-v~~~~~~~~~~l~~~~~----~~G~~~~p~da~ll~rgl~T  252 (386)
T PF01053_consen  187 --N--PL-----ELGADIVVHSATKYLSGHSDVMGGAV-VVNGSSELYDRLREFRR----LLGATLSPFDAWLLLRGLRT  252 (386)
T ss_dssp             -----GG-----GGT-SEEEEETTTTTTTSSSE-EEEE-EESSHHHHHHHHHHHHH----HHT-B--HHHHHHHHHHHTT
T ss_pred             --c--cC-----cCCceEEEeeccccccCCcceeeEEE-EECchhhhhhhhcchhh----hcCccchHHHHHHHhcCCCc
Confidence              1  11     11357889999999864443344442 3444 566665554332    11223344444444455554


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      -          ....++..++...+.+.|+ +.+
T Consensus       253 l----------~~R~~~~~~nA~~lA~~L~-~hp  275 (386)
T PF01053_consen  253 L----------PLRMERQNENAEALAEFLE-EHP  275 (386)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHHH-TST
T ss_pred             H----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence            3          3344555667777778887 664

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK07483 hypothetical protein; Provisional

Probab=99.65  E-value=5.9e-14  Score=135.60  Aligned_cols=341  Identities=13%  Similarity=0.120  Sum_probs=183.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|..-...|+.  +|.+.+++.++++...  ...+.......++.+.+++.....      .+.+.+  +++|
T Consensus        30 ~~ylD~~~g~~~~~lGh~--~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~sG   99 (443)
T PRK07483         30 KRYLDASGGAAVSCLGHS--HPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAG------LEHVYF--VSGG   99 (443)
T ss_pred             CEEEEcCccHhhhccCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--cCCc
Confidence            568899887543355655  5888898888875421  111112222334555555543211      367899  9999


Q ss_pred             hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCC------------CccceeeecC-CCc--cc----
Q 015283          112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDP-KTV--GL----  165 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~-~~~--~~----  165 (410)
                      ++|++.+.++.+.+.     +| .+|+....+|.+... .+...|.            .+..++.... +..  ..    
T Consensus       100 sEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  179 (443)
T PRK07483        100 SEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEA  179 (443)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHH
Confidence            999999998887762     33 578887877765532 1111110            1111221100 000  00    


Q ss_pred             ----ChhhHHHHHhc-CCCCcEEEEeCCCCC-CCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          166 ----DFEGMIADIKA-APGGSFILLHGCAHN-PTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       166 ----d~~~l~~~i~~-~~~~~~~ii~~~p~N-PtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                          .++.+++.+.. .++...++++...+. -.|.. ++.+-++++.++|++||+++|.||++.+|+-.   ...+...
T Consensus       180 ~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRt---G~~~a~~  256 (443)
T PRK07483        180 YGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRT---GTLFACE  256 (443)
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccC---cHHHHHh
Confidence                02455555542 233555666554453 23554 45666999999999999999999999988632   2333332


Q ss_pred             HHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHH---HHHhCChhhH
Q 015283          239 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIV---ANVVGNPALF  313 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a---~~~l~~~~~~  313 (410)
                      .+ +..++++   +++|.++ .|+ .+|.+++   ++++.+.+...-.. ...+++. ...++..++   ...+++++  
T Consensus       257 ~~-gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~l~~i~~~~--  325 (443)
T PRK07483        257 ED-GVAPDLV---TIAKGLG-AGYQPIGAVLA---SDRIYDAIADGSGFFQHGHTYL-GHATACAAALAVQRVIAEDG--  325 (443)
T ss_pred             hc-CCCCCee---eehhhhc-cCccccEEEEE---cHHHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHHHHHhcC--
Confidence            22 2234555   5699997 685 8898755   77755444321000 1122333 333333333   33333332  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhhcCcE
Q 015283          314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTNKWHV  377 (410)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~~~gi  377 (410)
                               ..++.++..++|.+.|+ ++-...+........|.+.-+.+          +      ..+..++++ +|+
T Consensus       326 ---------l~~~~~~~g~~l~~~L~-~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gl  394 (443)
T PRK07483        326 ---------LLANVRARGEQLRARLR-ERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMA-RGL  394 (443)
T ss_pred             ---------HHHHHHHHHHHHHHHHH-HHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHH-CCc
Confidence                     23444445555555554 32100001111122233321111          0      123445555 699


Q ss_pred             EEcCC--------C---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          378 YMTKD--------G---RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       378 ~v~~~--------g---Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+.+.        |   ||..+ .++++++++++++|.+++.++
T Consensus       395 l~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~  438 (443)
T PRK07483        395 MVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA  438 (443)
T ss_pred             EEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            98653        2   66543 249999999999999998753

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.65  E-value=1.3e-13  Score=128.19  Aligned_cols=280  Identities=17%  Similarity=0.146  Sum_probs=177.0

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      ......+.+.++++- +       .+..+.  +++|+.|+..+  ++..+.+||+|+++...|++....+.    ..|.+
T Consensus        62 nPT~~~lE~~~a~LE-g-------~~~~~a--fsSGmaAI~~~--~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~  129 (396)
T COG0626          62 NPTRDALEEALAELE-G-------GEDAFA--FSSGMAAISTA--LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE  129 (396)
T ss_pred             CccHHHHHHHHHHhh-C-------CCcEEE--ecCcHHHHHHH--HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence            456678999999884 2       233444  59999999998  56668899999999999988765554    56666


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      +..++.       .+.+..++.+.+  ++++++++-+|.|||-.   ..|+.+|+++|+++|+++|+|+.|....+-   
T Consensus       130 ~~~~d~-------~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~---v~DI~~i~~~A~~~g~~vvVDNTfatP~~q---  194 (396)
T COG0626         130 VTFVDP-------GDDEALEAAIKE--PNTKLVFLETPSNPLLE---VPDIPAIARLAKAYGALVVVDNTFATPVLQ---  194 (396)
T ss_pred             EEEECC-------CChHHHHHHhcc--cCceEEEEeCCCCcccc---cccHHHHHHHHHhcCCEEEEECCccccccc---
Confidence            665543       244566666653  47888999999999988   567788888899999999999998765532   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA  311 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~  311 (410)
                       .++       ..+.+|++.|.+|.++-.+-=+|.+ ++++++++.+.+.......   +-.......+..+.+-|+.- 
T Consensus       195 -~PL-------~~GaDIVvhSaTKyl~GHsDvl~G~-v~~~~~~~~~~~~~~~~~~---~G~~l~p~dA~l~lRGlkTL-  261 (396)
T COG0626         195 -RPL-------ELGADIVVHSATKYLGGHSDVLGGV-VLTPNEELYELLFFAQRAN---TGAVLSPFDAWLLLRGLRTL-  261 (396)
T ss_pred             -Chh-------hcCCCEEEEeccccccCCcceeeeE-EecChHHHHHHHHHHHHhh---cCCCCCHHHHHHHHhccchH-
Confidence             122       2236899999999997555445554 2456666555543332211   22233444444444444433 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc----------------CCcceeeecCCCHHHHHHhhhcC
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL----------------RQIGMFSFTGLNKAQSDNMTNKW  375 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ll~~~  375 (410)
                               .-..++..++...+.+.|+ +.+.-. -.+++                ..+|+|.|.=-+.+.+.+++++-
T Consensus       262 ---------~~Rm~~~~~nA~~IA~~L~-~~p~V~-~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L  330 (396)
T COG0626         262 ---------ALRMERHNENALKIAEFLA-DHPKVK-KVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSL  330 (396)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHh-cCCCeE-EEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhC
Confidence                     2334455556666777776 543200 01111                14556655311214455555543


Q ss_pred             cEEE---cCC-------------------------C------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          376 HVYM---TKD-------------------------G------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       376 gi~v---~~~-------------------------g------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .++.   .=|                         |      |+|++-   |+++.+++-|+++++.+
T Consensus       331 ~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~  395 (396)
T COG0626         331 KLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA  395 (396)
T ss_pred             CccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence            3332   111                         1      999854   89999999999998765

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.64  E-value=4.7e-14  Score=131.86  Aligned_cols=343  Identities=12%  Similarity=0.040  Sum_probs=198.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCcc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|-.+|.--...|+.  .+++.+++.++++. .+.+. +.......+|.+.+++.....     +-+++.+  +.||
T Consensus        44 ~r~lDg~sg~W~~~~Gh~--~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~-----~l~~vFf--~~sG  114 (449)
T COG0161          44 RRYLDGMSGLWCVNHGHG--RPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEG-----GLDHVFF--TDSG  114 (449)
T ss_pred             CEEEecccHHHHhhcCcC--CHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCC-----CccEEEE--eCCc
Confidence            466777776553445554  58899998888754 22111 112223567778888875422     1478999  9999


Q ss_pred             hhHHHHHHHHHHHhC--CC----CEEEEcCCCCcch-hhhhhhCC-------------CCccceeeecC------CCcc-
Q 015283          112 TGSLRLAAALIERYF--PG----AKVLISSPTWGNH-KNIFNDAR-------------VPWSEYRYYDP------KTVG-  164 (410)
Q Consensus       112 t~a~~~~~~~~~~~~--~g----d~Vl~~~p~y~~~-~~~~~~~g-------------~~~~~v~~~~~------~~~~-  164 (410)
                      ++|+++++++...+.  .|    .+++.-..+|.+- ...+...|             ..+..++....      ..+. 
T Consensus       115 SeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~  194 (449)
T COG0161         115 SEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDE  194 (449)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChH
Confidence            999999988776542  33    2377777777432 22222222             11222222110      1111 


Q ss_pred             ---cChhhHHHHHhcCC-CCcEEEEeCCCCCC-CCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          165 ---LDFEGMIADIKAAP-GGSFILLHGCAHNP-TGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       165 ---~d~~~l~~~i~~~~-~~~~~ii~~~p~NP-tG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                         -..++|++++.++. ++...++.-....- +|+.+++.. |+++.++|++||+++|.||+-.+|+-.   .+.+...
T Consensus       195 ~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRT---G~~FA~e  271 (449)
T COG0161         195 EFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRT---GKMFACE  271 (449)
T ss_pred             HHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcC---chhhhhh
Confidence               23667888887765 55566664444445 787776666 999999999999999999999998843   2333222


Q ss_pred             HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH-HHhhccCcccCCChhHHHHH---HHHhCChhhHH
Q 015283          239 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ-LKRLARPMYSNPPVHGARIV---ANVVGNPALFD  314 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~  314 (410)
                      .+ +-.++.+   +++|.++-.=+.+|.+++   ++++.+.+... ........+.+...++..++   ..+++++    
T Consensus       272 ~~-gi~PDi~---~~aKGLT~GY~Pl~a~l~---~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e----  340 (449)
T COG0161         272 HA-GIVPDIL---CLAKGLTGGYLPLSAVLT---SDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEE----  340 (449)
T ss_pred             hc-CCCCCee---eecccccccchhhHhHhh---hHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhc----
Confidence            21 2234555   678988644466677543   66766666553 11111122223334443433   2333322    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCcccccCCcceeeecCC----C---------HHHHHHhhhcCcEEEc
Q 015283          315 EWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSFILRQIGMFSFTGL----N---------KAQSDNMTNKWHVYMT  380 (410)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~----~---------~~~~~~ll~~~gi~v~  380 (410)
                             ...++.++...++.+.|+ + +.- .+..-..+..|++.-+.+    .         ...+.+...++|+.++
T Consensus       341 -------~l~~~~~~~~~~l~~~L~-~~l~~-~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iR  411 (449)
T COG0161         341 -------DLLERVAEIGAYLQAGLQ-AALAD-HPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIR  411 (449)
T ss_pred             -------CHHHHHHHHHHHHHHHHH-Hhccc-CCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEe
Confidence                   445566677777777777 5 220 112222334454433322    1         2234444445799999


Q ss_pred             CCC-eEEec---CCCcccHHHHHHHHHHHhhh
Q 015283          381 KDG-RISLA---GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       381 ~~g-Ris~~---~~~~~~i~~~~~~l~~~l~~  408 (410)
                      |.| -+-++   .+|++|++++++++++++++
T Consensus       412 p~g~~i~~~PPliit~~eid~l~~~l~~al~~  443 (449)
T COG0161         412 PLGDVIYLMPPLIITREEIDELVDALREALDE  443 (449)
T ss_pred             ecCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence            998 33322   24999999999999999875

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.64  E-value=1.9e-14  Score=148.76  Aligned_cols=334  Identities=13%  Similarity=0.105  Sum_probs=193.7

Q ss_pred             eeecCCCccccc-HHHHHHHHHhhcc----CCCccCc----CCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283           43 AYRTEELQPYVL-DVVKKAENLMLER----GENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT  112 (410)
Q Consensus        43 ~~~~~~~~~~~~-~~v~~a~~~~~~~----~~~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt  112 (410)
                      .|+|..+.++.+ ..+.+++.+....    .+ ..|.    ...-+.+.|+.+++++....     .+ .|+|  |+|+|
T Consensus        36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~-----~~~~VvF--tsnaT  107 (805)
T PLN02724         36 VYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPP-----SDYACVF--TSGAT  107 (805)
T ss_pred             EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCc-----cceEEEE--eCChH
Confidence            567777766544 4555655554321    11 1121    12236788899999875431     23 5788  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecC------CCcccCh--hhHHHHHh----c-
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDP------KTVGLDF--EGMIADIK----A-  176 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~------~~~~~d~--~~l~~~i~----~-  176 (410)
                      +++.+++..+ .+.+||+|+++.-.|.+...   .++..|+++..++....      ....+++  +.+++.++    . 
T Consensus       108 ~alnlva~~l-~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~  186 (805)
T PLN02724        108 AALKLVGETF-PWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKR  186 (805)
T ss_pred             HHHHHHHHHC-CCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccc
Confidence            9999974332 25689999998777765543   33456888888876311      1122332  45555431    1 


Q ss_pred             --CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc-----CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          177 --APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK-----NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       177 --~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                        ..+++++++++..+|.||...|.+.++.+.+.++.+     ++++++|.+ +..+..+.+     +    ...+.+++
T Consensus       187 ~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaa-Q~~g~~piD-----v----~~~~~Dfl  256 (805)
T PLN02724        187 EDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAA-KGCGTSPPD-----L----SRYPADFV  256 (805)
T ss_pred             cccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehh-hhcCCCCCC-----h----hhcCCCEE
Confidence              123567888899999999999987655544433322     367999999 444422121     1    22346889


Q ss_pred             Eeccccccc-ccCCCcceEEEEeCCchhHHHHHHHHHhh--------------------ccCcccCCChhHHHHHHHHhC
Q 015283          250 AQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRL--------------------ARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       250 ~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~a~~~l~  308 (410)
                      +.|..|.+| +.|  +|++++   +++..+.+...+...                    .+...++++..+..++...++
T Consensus       257 ~~S~HK~~GgP~G--~G~L~v---r~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~  331 (805)
T PLN02724        257 VVSFYKIFGYPTG--LGALLV---RRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK  331 (805)
T ss_pred             EEecceeccCCCC--ceEEEE---ehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH
Confidence            999999998 556  588865   556544443211100                    000011222222222222221


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-CC--CcccccC---------Ccceeeec--CC-----CHHHHH
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-GK--DWSFILR---------QIGMFSFT--GL-----NKAQSD  369 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~-~~--~~~~~~~---------~~~~~~~~--~~-----~~~~~~  369 (410)
                         +..  .-.++++.++.+++.+++.+.|+ ++.- .+  .+.++.+         .++.+.|.  +.     ....+.
T Consensus       332 ---~l~--~ig~~~I~~~~~~L~~~l~~~L~-~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~  405 (805)
T PLN02724        332 ---LLN--RLTISAIAMHTWALTHYVANSLR-NLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVE  405 (805)
T ss_pred             ---HHH--HhChHHHHHHHHHHHHHHHHHHH-hccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHH
Confidence               111  01246778888999999999988 7630 00  1233322         33444432  32     345566


Q ss_pred             HhhhcCcEEEcC-----------------------------------------CC--eEEecCC-CcccHHHHHHHHHHH
Q 015283          370 NMTNKWHVYMTK-----------------------------------------DG--RISLAGL-SLAKCEYLADAIIDS  405 (410)
Q Consensus       370 ~ll~~~gi~v~~-----------------------------------------~g--Ris~~~~-~~~~i~~~~~~l~~~  405 (410)
                      .++.++||.++.                                         .|  |+|++.. |.+|++++++.|++.
T Consensus       406 ~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~  485 (805)
T PLN02724        406 KLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS  485 (805)
T ss_pred             HHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence            666666777622                                         14  8887753 889999999999986


Q ss_pred             h
Q 015283          406 Y  406 (410)
Q Consensus       406 l  406 (410)
                      .
T Consensus       486 ~  486 (805)
T PLN02724        486 F  486 (805)
T ss_pred             h
Confidence            5

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.64  E-value=1.1e-13  Score=132.83  Aligned_cols=158  Identities=17%  Similarity=0.116  Sum_probs=114.2

Q ss_pred             cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCCCc
Q 015283           77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW  152 (410)
Q Consensus        77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~  152 (410)
                      .....+++.++++...       ...+++   ++|+.|+.++  +...+.+||+|+++...|.+..    ..+...|.++
T Consensus        69 pt~~~le~~la~l~g~-------~~~v~f---sSG~~Ai~~a--l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v  136 (437)
T PRK05613         69 PTVEALENRIASLEGG-------VHAVAF---ASGQAAETAA--ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEV  136 (437)
T ss_pred             hHHHHHHHHHHHHhCC-------CeEEEe---CCHHHHHHHH--HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEE
Confidence            3457888889888533       234555   6777888766  4455789999999999998774    3446788888


Q ss_pred             cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283          153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN  232 (410)
Q Consensus       153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~  232 (410)
                      ..++.  .    .|++.+++.+++   +++++++.++.||+|.+.   ++++|+++|+++|+++|+|.++.....    .
T Consensus       137 ~~vd~--~----~d~e~l~~~l~~---~tk~V~~e~~~Np~~~v~---di~~I~~la~~~gi~livD~t~a~g~~----~  200 (437)
T PRK05613        137 TFVEN--P----DDPESWQAAVQP---NTKAFFGETFANPQADVL---DIPAVAEVAHRNQVPLIVDNTIATAAL----V  200 (437)
T ss_pred             EEECC--C----CCHHHHHHhCCc---cCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCeEEEECCCccccc----c
Confidence            87762  2    278899988875   577777788999999844   566777789999999999999643221    1


Q ss_pred             chhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      .  ++     ....++++.|++|.++..|..+|.+++
T Consensus       201 ~--p~-----~~GaDivv~S~~K~l~G~gd~~gG~vv  230 (437)
T PRK05613        201 R--PL-----ELGADVVVASLTKFYTGNGSGLGGVLI  230 (437)
T ss_pred             C--hH-----HhCCCEEEeeccceecCCCcceeEEEE
Confidence            1  11     123578899999999877766677643

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.63  E-value=1.3e-13  Score=133.68  Aligned_cols=339  Identities=15%  Similarity=0.096  Sum_probs=180.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC-cc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|..-...|+.  +|.+.+++.+++..... .. +.+.....++.+.+++......   .....+.+  +++|
T Consensus        58 ~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~---~~~~~~f~--~~SG  130 (459)
T PRK06931         58 NQYLDCLAGAGTLALGHN--HPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQG---KEYCLQFT--GPSG  130 (459)
T ss_pred             CEEEEcccchhhccCCCC--CHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCcc---ccceEEEe--CCCc
Confidence            568899888643345654  58899998888754221 11 1122223345555554432110   00012344  6899


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CC------------CCccceeeecCCC--cc----cChhhH--
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKT--VG----LDFEGM--  170 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~--~~----~d~~~l--  170 (410)
                      ++|++.+.++.+.+....+|+....+|.+....... .+            ..+..+|..+...  +.    -+.+.+  
T Consensus       131 sEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (459)
T PRK06931        131 ADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTY  210 (459)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence            999999998888776667898888888766433221 11            1122222211000  00    112222  


Q ss_pred             --HHHHhc---CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          171 --IADIKA---APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       171 --~~~i~~---~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                        ++.+..   ..+....+++-..+.-.|... +..-++++.++|++||+++|.||+..+|+-.   ...+....+ +..
T Consensus       211 ~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRt---G~~~a~~~~-gv~  286 (459)
T PRK06931        211 YFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFART---GKMFAFEHA-GIE  286 (459)
T ss_pred             HHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcC---chHHHhhhc-CCC
Confidence              233321   123456666555566667665 4555999999999999999999999988632   233333222 223


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH---HHhCChhhHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEME  321 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~~~~~~  321 (410)
                      ++++   +++|.++ .|+.+|.+..   +++ ++.+.   .....++++ ...++..++.   ..+.+++          
T Consensus       287 PDiv---t~gK~l~-gG~Pi~av~~---~~~-~~~~~---~~~~~~T~~-gnpla~aaala~L~~l~~~~----------  344 (459)
T PRK06931        287 PDII---VMSKAVG-GGLPLAVLGI---KKE-FDAWQ---PGGHTGTFR-GNQLAMATGLTTLKILKEEN----------  344 (459)
T ss_pred             CCEE---Eeccccc-CCcceeeeee---HHH-Hhhcc---CCCCCCCCC-CCHHHHHHHHHHHHHHHhCC----------
Confidence            4555   5799998 6899987633   444 23221   112223333 3334334433   3333332          


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------------CH----HHHHHhhhcCcEEEcCC
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------------NK----AQSDNMTNKWHVYMTKD  382 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~~ll~~~gi~v~~~  382 (410)
                       ..++.++..++|.+.|+ ++....++.......|.+.-+.+               +.    .+...+++ .|+.+.+.
T Consensus       345 -l~~~~~~~G~~l~~~L~-~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~  421 (459)
T PRK06931        345 -LAQNAAERGEWLKAQLA-ELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFE-NGLLLERG  421 (459)
T ss_pred             -HHHHHHHHHHHHHHHHH-HHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHH-CCcEEeec
Confidence             22344444444444444 33100011111122233321111               11    12334454 69999764


Q ss_pred             C------eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          383 G------RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       383 g------Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      +      |+..+. +++++++++++++.+++.+
T Consensus       422 ~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~  454 (459)
T PRK06931        422 GRNGNVVRLLPPLLITQAECEEFIDRFEQALLA  454 (459)
T ss_pred             CCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence            3      665442 4999999999999999875

>PRK04311 selenocysteine synthase; Provisional

Probab=99.61  E-value=4.2e-13  Score=129.23  Aligned_cols=343  Identities=15%  Similarity=0.091  Sum_probs=194.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .++||..-..++++.+.+++++.+.+++.+.+.......|.-     ..-+..+++.+++++..        +..++  +
T Consensus        79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--------e~a~v--v  148 (464)
T PRK04311         79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--------EDALV--V  148 (464)
T ss_pred             cceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--------CeEEE--E
Confidence            367887755677888888889999999988875432122221     11236788888888532        34555  6


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCc----c--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWG----N--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF  182 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~----~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~  182 (410)
                      ++|+.|+.++   +..+.+||+|+++...+.    .  ....++..|++++.++..+    ..+++++++.+++   +++
T Consensus       149 ~sgtaAl~l~---l~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~---~Tk  218 (464)
T PRK04311        149 NNNAAAVLLA---LNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINE---NTA  218 (464)
T ss_pred             CCHHHHHHHH---HHHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCc---cCe
Confidence            8899888876   345689999999876433    1  2335567899988887532    2468889998875   678


Q ss_pred             EEEeCCCCCCC--CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC---CCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          183 ILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS---LDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       183 ~ii~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                      ++++.+++||+  |.. ...++++|+++|++||+++++|.+...+....   ....+ .+.... ..+.+++++|.+|.+
T Consensus       219 lV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l-~~GaDiv~fSg~K~L  295 (464)
T PRK04311        219 LLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELL-AAGVDLVTFSGDKLL  295 (464)
T ss_pred             EEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-chhhHH-hcCCcEEEecCcccc
Confidence            88888999984  531 23568888899999999999999733321100   00011 111111 234679999999998


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhH-HHHHH-HHhCChhhHHHH--HHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHG-ARIVA-NVVGNPALFDEW--KAEMEMMAGRIKNVRQK  333 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~-~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~  333 (410)
                      |-|  ..|++++   +++++++++..  ...+.....-..++ ..+.. ..+...+.....  .+-+....++..++...
T Consensus       296 gGp--~~G~i~g---~~~li~~l~~~--~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~  368 (464)
T PRK04311        296 GGP--QAGIIVG---KKELIARLKKH--PLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAER  368 (464)
T ss_pred             cCC--ceEEEEE---cHHHHHHHhhc--hhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHH
Confidence            744  4687644   77766665421  11111111111111 11111 112111100000  00111222445556666


Q ss_pred             HHHHhhhccCCCC-CcccccC----Ccc------ee---eec---CCCHHHHHHhhhcC--cEEEcCC-C--eEEecCCC
Q 015283          334 LFDSLSAKDKSGK-DWSFILR----QIG------MF---SFT---GLNKAQSDNMTNKW--HVYMTKD-G--RISLAGLS  391 (410)
Q Consensus       334 l~~~l~~~~g~~~-~~~~~~~----~~~------~~---~~~---~~~~~~~~~ll~~~--gi~v~~~-g--Ris~~~~~  391 (410)
                      +.+.|+ .....+ ...+...    .+|      +.   +-+   +++...+.+.|++.  .|+.+-. +  .+.+.++.
T Consensus       369 la~~L~-~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~~~~~~ld~r~~~  447 (464)
T PRK04311        369 LAAALK-AALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIEDGRLLLDLRTLE  447 (464)
T ss_pred             HHHHHH-hccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEECCEEEEEeCcCC
Confidence            666665 432100 0111111    011      11   111   23455555555542  4555432 3  44566778


Q ss_pred             cccHHHHHHHHHHHhh
Q 015283          392 LAKCEYLADAIIDSYH  407 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~  407 (410)
                      ++|++.++++|++++.
T Consensus       448 ~~~~~~~~~~~~~~~~  463 (464)
T PRK04311        448 EEDEERLAAALLEALN  463 (464)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            8999999999998864

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.61  E-value=3.2e-13  Score=130.50  Aligned_cols=337  Identities=11%  Similarity=0.051  Sum_probs=180.2

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHH--HHHHhhccC-----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKK--AENLMLERG-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT  105 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~--a~~~~~~~~-----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~  105 (410)
                      +...+|+..|.--...|+.  .|.+.+  ++.+++..-     ....| ......++.+.+++.....     ..+.+.+
T Consensus        44 G~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~ql~~l~~~~~~~~~~-~~~~~~~la~~l~~~~~p~-----~~~~v~f  115 (443)
T PRK08297         44 GRRYLDMFTFFASSALGMN--HPALADDPEFRAELGRAALNKPSNSDV-YTVEMARFVDTFARVLGDP-----ELPHLFF  115 (443)
T ss_pred             CCEeeecccCHhhhcCCCC--ChHHhhHHHHHHHHHHhhhhccccCCc-CCHHHHHHHHHHHhhcCCC-----CCCEEEE
Confidence            3467788776543344554  477877  777766431     10112 2223344555555542111     1368999


Q ss_pred             EecCChhhHHHHHHHHHHHhC------CC------CEEEEcCCCCcchhhhhh-hCCCCc-----------cceeeec--
Q 015283          106 VQGLSGTGSLRLAAALIERYF------PG------AKVLISSPTWGNHKNIFN-DARVPW-----------SEYRYYD--  159 (410)
Q Consensus       106 ~~t~ggt~a~~~~~~~~~~~~------~g------d~Vl~~~p~y~~~~~~~~-~~g~~~-----------~~v~~~~--  159 (410)
                        +++|++|++.+.++.+.+.      .|      .+|+....+|.+...... ..|...           ..++...  
T Consensus       116 --~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (443)
T PRK08297        116 --VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLR  193 (443)
T ss_pred             --eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCC
Confidence              9999999999988886552      12      578888888866543222 221100           0011000  


Q ss_pred             ----CCC----c---ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283          160 ----PKT----V---GLDFEGMIADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS  227 (410)
Q Consensus       160 ----~~~----~---~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~  227 (410)
                          ..+    .   .-+++.+++.+.+.+++...+++...+...|.. ++...++++.++|++||+++|.||++.+|+-
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR  273 (443)
T PRK08297        194 FPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL  273 (443)
T ss_pred             CCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence                000    0   012455566676555566777765556556765 5666799999999999999999999998863


Q ss_pred             CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH--hhccCcccCCChhHHHHHHH
Q 015283          228 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK--RLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~  305 (410)
                      .   ...+....+ +..++++   +++|.++     +|.+  +. .+++.+.+...+.  ....+++ +.+.++..++..
T Consensus       274 t---G~~~a~~~~-gv~PDiv---~~gK~l~-----~~a~--l~-~~~i~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a  337 (443)
T PRK08297        274 T---GTAWAYQQL-GVRPDIV---AFGKKTQ-----VCGI--MA-GRRVDEVEDNVFAVSSRINSTW-GGNLVDMVRARR  337 (443)
T ss_pred             c---chHHHHHhc-CCCCCEE---Eeccccc-----ccce--ec-chHHHHhhhhhccCccccCCCC-CccHHHHHHHHH
Confidence            2   233333222 2234544   4799874     2333  22 3332211111111  1122233 233344444433


Q ss_pred             HhC---ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-cc-cccCCcceeeecCC-C----HHHHHHhhhcC
Q 015283          306 VVG---NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD-WS-FILRQIGMFSFTGL-N----KAQSDNMTNKW  375 (410)
Q Consensus       306 ~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~-~~~~~~~~~~~~~~-~----~~~~~~ll~~~  375 (410)
                      .|+   +.           ...++.++..+++.+.|+ ++....+ +. ..... |.+..+.+ +    ..+..++++ +
T Consensus       338 ~L~~l~~~-----------~l~~~~~~~g~~l~~~L~-~l~~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~-~  403 (443)
T PRK08297        338 ILEVIEED-----------GLVENAARQGEYLLARLE-ELAAEFPAVVSNVRGR-GLMCAFDLPTTADRDEVIRRLWE-E  403 (443)
T ss_pred             HHHHHHhc-----------CHHHHHHHHHHHHHHHHH-HHHHHCCCcceeeecc-ceEEEEEecCHHHHHHHHHHHHH-C
Confidence            332   22           233444455555555554 3311000 11 22233 44443333 2    234556664 6


Q ss_pred             cEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          376 HVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       376 gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ||.+.|.|    ||+.+. .|++++++++++|.+++.++
T Consensus       404 Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        404 GVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             CEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            99998865    675332 49999999999999998765

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.61  E-value=3.2e-15  Score=135.41  Aligned_cols=252  Identities=18%  Similarity=0.063  Sum_probs=161.9

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI  133 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~  133 (410)
                      .|.+.+++.++... . ..|.......++++.+++++..        +..++  +.+||.++.++.+.+  +.|++.|++
T Consensus         8 ~~~m~~a~~~a~~g-d-~~Yg~D~~~~~l~~~i~~l~g~--------e~a~f--~~sGT~An~~al~~~--~~~~~~vi~   73 (290)
T PF01212_consen    8 TPAMLEAMAAANVG-D-DAYGEDPTTARLEERIAELFGK--------EAALF--VPSGTMANQLALRAH--LRPGESVIC   73 (290)
T ss_dssp             -HHEEHHHHHTTSB---CCTTSSHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHHH--HHTTEEEEE
T ss_pred             CHHHHHHHHccccC-C-cccCCChhHHHHHHHHHHHcCC--------CEEEE--eCCCChHHHHHHHHH--HhcCCceec
Confidence            58888888665533 3 4698888889999999999633        34557  789999999984433  579999999


Q ss_pred             cCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q 015283          134 SSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPT-GIDPTPEQWEKIA  206 (410)
Q Consensus       134 ~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPt-G~~~~~~~l~~i~  206 (410)
                      ..+++....+   .....|.+++.++.  .+.+.+|++++++.+..   +...+.++.+++|+|.. |+++|.+++++|.
T Consensus        74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~--~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~  151 (290)
T PF01212_consen   74 ADTAHIHFDETGAIEELSGAKLIPLPS--DDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS  151 (290)
T ss_dssp             ETTEHHHHSSTTHHHHHTTCEEEEEBE--CTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred             cccceeeeeccchhhHhcCcEEEECCC--cccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence            9997754432   22457888888876  33377999999999877   33467888888898875 8899999999999


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHh
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR  286 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~  286 (410)
                      ++|++||+.++.|.+.......   .....+..+.  ...+++..|++|.+++++   |.+  ++.+++.+++.....+.
T Consensus       152 ~~a~~~gl~lhmDGARl~~a~~---~~~~~~~e~~--~~~D~v~~~~tK~~g~~~---Gav--l~~~~~~i~~~~~~~k~  221 (290)
T PF01212_consen  152 ELAREHGLPLHMDGARLANAAA---ALGVSLAEIA--AGADSVSFGGTKNGGAPG---GAV--LAGNKEFIAKARRQRKR  221 (290)
T ss_dssp             HHHHHHT-EEEEEETTHHHHHC---HHHHHHHHHH--TTSSEEEEETTSTT-SSS---EEE--EEESHHHHHHHHHHHHH
T ss_pred             HHHHhCceEEEEehhhHHHhhh---cccccHHHHh--hhCCEEEEEEEccccccc---ceE--EEechHHHHHHHHHHHH
Confidence            9999999999999995332210   0111222222  235566679999987665   665  44477766655444332


Q ss_pred             hccCcccCCChhHH-----HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          287 LARPMYSNPPVHGA-----RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       287 ~~~~~~~~~~~~~~-----~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ....+.... .+++     .++...++..          .....+..++.+.+.+.|+ .++
T Consensus       222 ~gg~~~~~G-~~~a~~~~~~~~l~~l~~~----------~~~~~~~~~~A~~La~~l~-~~~  271 (290)
T PF01212_consen  222 LGGGMRQAG-VLAAAELYQFAALRALELW----------LERARHANAMAKRLAAGLE-ALG  271 (290)
T ss_dssp             HTHHHHHTT-HHHHHHHHHHHHHCHEECS----------HHHHHCHHHHHHCHHHCHH-EEC
T ss_pred             hccCeeecc-eeeeechhhHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHH-HCC
Confidence            222111111 1111     1222222221          2444566667888888998 887

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.60  E-value=3.8e-13  Score=126.96  Aligned_cols=274  Identities=15%  Similarity=0.141  Sum_probs=163.0

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~  150 (410)
                      ..+...+|.+.++++...        +..+.  +++|+.|+.++  +.+.+.+||+|+++.+.|+...    ..+...|.
T Consensus        62 ~~P~~~~lE~~la~leg~--------~~av~--~sSG~aAi~~a--l~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi  129 (384)
T PRK06434         62 GNPTVQAFEEKYAVLENA--------EHALS--FSSGMGAITSA--ILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGI  129 (384)
T ss_pred             CChhHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHHhcCc
Confidence            344567899999999533        23444  69999999988  4555889999999988776554    55667898


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      +++.++..+.+++.++           +++++++++.+|.|||+.+   .++++|+++|++++  +++|.++......  
T Consensus       130 ~v~fvd~~~~~~~~l~-----------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~~~--  191 (384)
T PRK06434        130 HVDYIDTDRLNSLDFD-----------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPYNQ--  191 (384)
T ss_pred             EEEEECCCChhheeec-----------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcccC--
Confidence            9888876322222221           1356778889999999984   67888888899998  4669996422211  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                        .  ++     ....++++.|.+|.++-+|--+|.++ +++++++.++++....    ......+...+..+...|+.-
T Consensus       192 --~--pl-----~~gaDivv~S~tK~i~G~~d~~gG~v-v~~~~~~~~~~~~~~~----~~G~~~~~~~A~l~~~gL~tL  257 (384)
T PRK06434        192 --N--PL-----DLGADVVIHSATKYISGHSDVVMGVA-GTNNKSIFNNLVERRK----TLGSNPDPIQAYLALRGLKTL  257 (384)
T ss_pred             --C--ch-----hcCCCEEEeecccccCCCCCceEEEE-ecCcHHHHHHHHHHHH----hcCCCCCHHHHHHHHhCCCcH
Confidence              1  11     12367888999999975453344442 4666665555543221    111223333323333444432


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc----------cCCcceeeecCC-CHHHHHHhhhcCcEEE
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI----------LRQIGMFSFTGL-NKAQSDNMTNKWHVYM  379 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~----------~~~~~~~~~~~~-~~~~~~~ll~~~gi~v  379 (410)
                                ....++-.++...+.+.|+ ..+.-.. ..+          ...+|++.|- + ..+.+.++++.-.++.
T Consensus       258 ----------~~R~~r~~~~a~~~a~~L~-~~p~v~~-V~yPgl~~~~~~~~g~g~~~sf~-l~~~~~~~~f~~~l~l~~  324 (384)
T PRK06434        258 ----------GLRMEKHNKNGMELARFLR-DSKKISN-VYYPDTEIGKKVLRGFGGMLSFE-LRSMEDVHKFIRNLEIPM  324 (384)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH-cCCCccE-EECCChHHHHHhcCCCCceEEEE-ECCHHHHHHHHHhCCcce
Confidence                      3444455556666667776 5542100 111          1234444332 2 3444445554333221


Q ss_pred             -c------------CC-------------------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          380 -T------------KD-------------------G--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       380 -~------------~~-------------------g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                       .            |.                   +  |||++-   |+.+.+++.|.++|.+
T Consensus       325 ~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl---Ed~~dLi~dl~~Al~~  384 (384)
T PRK06434        325 VAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI---EDIDDLIKDIENALSK  384 (384)
T ss_pred             EccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHhcC
Confidence             1            10                   1  899854   8999999999998853

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.60  E-value=7.4e-13  Score=119.62  Aligned_cols=341  Identities=14%  Similarity=0.098  Sum_probs=200.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      .+.||+..+.--...|+.  .|++.+++.+....- + ...|...+ .-++.+.+.+.+.+.     +.+.|.|  .++|
T Consensus        56 ~EyiD~~ssw~~~~~Gha--npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~~-----~~~rvff--~nsG  125 (433)
T KOG1401|consen   56 KEYIDFTSSWAVTILGHA--NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGKG-----SAERVFF--CNSG  125 (433)
T ss_pred             ceeeeeccceeccccCCC--CHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccCC-----CccEEEE--ecCC
Confidence            467888887653344554  699999988776542 2 22332222 334444444443222     3789999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCC------EEEEcCCCCcchhh-hhhhCCCCccceeee---cC--CCcccChhhHHHHHhcCCC
Q 015283          112 TGSLRLAAALIERYFPGA------KVLISSPTWGNHKN-IFNDARVPWSEYRYY---DP--KTVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd------~Vl~~~p~y~~~~~-~~~~~g~~~~~v~~~---~~--~~~~~d~~~l~~~i~~~~~  179 (410)
                      |+|++.+.++.+.+.--+      +++...-+|.+..- .+...+......|..   ++  ...--|...+++.++.++.
T Consensus       126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~  205 (433)
T KOG1401|consen  126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG  205 (433)
T ss_pred             cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence            999999988776654222      48888877755422 222222222222110   00  0011368899999998766


Q ss_pred             CcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          180 GSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      ...++|+-..+..-|..+ +++.++.|.+.|+++|+++|.||++.+|+-   ....|....+ .-.+++.   ++.|.++
T Consensus       206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR---~g~~~a~e~~-~~~PDI~---t~aK~L~  278 (433)
T KOG1401|consen  206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGR---LGYGWAQEYF-GVTPDIT---TVAKPLG  278 (433)
T ss_pred             ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccc---cchHHHHHHh-CcCCcce---eehhhcc
Confidence            667777666676677665 556699999999999999999999998773   3345544333 2333444   7899998


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                       .|+.+|...+   ++++.+.+......+...+++ +|..++..+ ....|.++++       +++..++-+..++.+.+
T Consensus       279 -gGlPigA~~v---~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~-------~k~vs~~~k~L~~~l~e  347 (433)
T KOG1401|consen  279 -GGLPIGATGV---RDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPET-------LKNVSKIGKELRKLLDE  347 (433)
T ss_pred             -CCceeEEEee---hHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHH-------HHHHHHHHHHHHHHHHH
Confidence             7899999765   777555554332222333333 343333222 2455556543       24555555666666666


Q ss_pred             HhhhccCCCCCccccc-CCcceeeec----CC----C-----HHH----HHHhhhcCcEEEcCCCeEEecCCCcccHHHH
Q 015283          337 SLSAKDKSGKDWSFIL-RQIGMFSFT----GL----N-----KAQ----SDNMTNKWHVYMTKDGRISLAGLSLAKCEYL  398 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~-~~~~~~~~~----~~----~-----~~~----~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~  398 (410)
                      .+. +.+.    .... ...+.++..    +.    +     ..+    ...+++ .|+++.|-.-+++.. ++|.++++
T Consensus       348 ~~~-~~~~----~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~-~gv~i~P~~~l~~~~-~~E~i~~~  420 (433)
T KOG1401|consen  348 YLK-KTPN----SICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLE-EGVRIAPIYLLTVEH-TPEVIQRL  420 (433)
T ss_pred             Hhc-cCCC----ceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhccccc-ceEEEeccccccccC-cHHHHHHH
Confidence            665 4331    1111 222333211    11    1     111    223333 478888744344444 68889999


Q ss_pred             HHHHHHHhhhc
Q 015283          399 ADAIIDSYHNV  409 (410)
Q Consensus       399 ~~~l~~~l~~~  409 (410)
                      ++.+.+.+.++
T Consensus       421 l~i~~~~l~~~  431 (433)
T KOG1401|consen  421 LTILEKVLSAL  431 (433)
T ss_pred             HHHHHHHHHHh
Confidence            99999888765

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.59  E-value=3.6e-13  Score=130.00  Aligned_cols=324  Identities=15%  Similarity=0.127  Sum_probs=175.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...||+..|.--...|+.  .|.+.+++.++++...  .|. +.....++.+.+++.+..       .+.+.+  +++|+
T Consensus        48 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~--~~~~~~~~~~~la~~l~~~~p~-------~~~v~f--~~sGs  114 (431)
T PRK06209         48 NEYIEYGMGLRAVGLGHA--YPPVVEAVREALQDGC--NFTRPSAIELDAAESFLELIDG-------ADMVKF--CKNGS  114 (431)
T ss_pred             CEEEEccccccchhcCCC--CHHHHHHHHHHHHhCc--CCCCCCHHHHHHHHHHHHhCCc-------cceEEE--ecCHH
Confidence            568899877543345665  5889999888876532  232 222222556666666421       257888  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEc-CCCCcchhhh-----hhhCCCC------ccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLIS-SPTWGNHKNI-----FNDARVP------WSEYRYYDPKTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~-~p~y~~~~~~-----~~~~g~~------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~  180 (410)
                      +|++.+.++.+.+....+|+.. .-+|..+...     ....|..      +..++.       .|++.+++.+.+.++.
T Consensus       115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~  187 (431)
T PRK06209        115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRY-------NDIASLEALFEDHPGR  187 (431)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCC-------CCHHHHHHHHHhCCCC
Confidence            9999998888776544556554 2233221100     0001110      111111       2788898888654334


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      ..++++. |  ..|...+...+++|.++|++||+++|+||++.++...     ........+..+++   .+++|.+| .
T Consensus       188 ~aavi~E-p--v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~-----~~g~~~~~gv~PDi---~t~gK~lg-g  255 (431)
T PRK06209        188 IACVILE-P--ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH-----MRGAQKLYGIVPDL---SCFGKALG-N  255 (431)
T ss_pred             EEEEEEc-c--ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC-----cchhhHHhCCCcce---eeehhhhc-C
Confidence            5555543 2  2455777888999999999999999999998777532     11222212222333   47899998 5


Q ss_pred             CCCcceEEEEeCCchhHHH--HHHHH-H-hhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015283          261 AERIGAMNVVCSSSDLAAR--VKSQL-K-RLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQK  333 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (410)
                      |+.+|++++   ++++.+.  +...- . .....++.+++.++..++   ...+.+++           ..++++++.++
T Consensus       256 G~p~~av~~---~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~-----------~~~~~~~~g~~  321 (431)
T PRK06209        256 GFAVSALAG---KREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED-----------VIERLHEQGAK  321 (431)
T ss_pred             CcccEEEEE---HHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC-----------HHHHHHHHHHH
Confidence            788888644   6664433  10000 0 011122222323333333   33444332           23344444444


Q ss_pred             HHHHhh---hccCCCCCcccccCCccee--eec--C---C-CH----HHHHHhhhcCcEEEcCCCeEEecCCCcccHHHH
Q 015283          334 LFDSLS---AKDKSGKDWSFILRQIGMF--SFT--G---L-NK----AQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYL  398 (410)
Q Consensus       334 l~~~l~---~~~g~~~~~~~~~~~~~~~--~~~--~---~-~~----~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~  398 (410)
                      +.+.|+   .+.+...   .....+...  .++  +   . ..    .+..++++ .|+++. .-+|+.. .|+++++++
T Consensus       322 l~~~L~~~~~~~~~~~---~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p-~l~is~~-ht~~dId~~  395 (431)
T PRK06209        322 LAAGVNEAAAEHGLQD---HVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMP-SLVVSYA-HGDADIERT  395 (431)
T ss_pred             HHHHHHHHHHhCCCCe---EEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCcccc-ccccccc-CCHHHHHHH
Confidence            444443   0233211   111111111  111  1   1 11    23455555 699873 3355543 499999999


Q ss_pred             HHHHHHHhhhc
Q 015283          399 ADAIIDSYHNV  409 (410)
Q Consensus       399 ~~~l~~~l~~~  409 (410)
                      +++|.+++..+
T Consensus       396 l~~l~~~l~~~  406 (431)
T PRK06209        396 IDAVHGALGVY  406 (431)
T ss_pred             HHHHHHHHHHH
Confidence            99999988653

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.59  E-value=7.9e-15  Score=130.15  Aligned_cols=287  Identities=11%  Similarity=0.095  Sum_probs=155.8

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHh--CCC--CEEEEcCCCCcchhhhhhhCCCCcc
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERY--FPG--AKVLISSPTWGNHKNIFNDARVPWS  153 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~--~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~  153 (410)
                      .++|.+.|.++ ++.-|..++.+ .|++  ..|+|+.+..+.-.+...  ..+  -.|+...|.|+.|........-.. 
T Consensus        45 s~eL~~~Ir~L-H~~VGNAvt~gr~IV~--GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~-  120 (363)
T PF04864_consen   45 SPELERQIRRL-HRVVGNAVTDGRYIVF--GTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRL-  120 (363)
T ss_dssp             -HHHHHHHHHH-HHHH-SB--TTSEEEE--ECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTT-
T ss_pred             cHHHHHHHHHH-HHHhccccccCcEEEE--cCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccC-
Confidence            36888888888 55555555554 4666  677777777763333222  111  489999999999987655432221 


Q ss_pred             ceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCc
Q 015283          154 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND  233 (410)
Q Consensus       154 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~  233 (410)
                       +...      =|.....   +...+.+.+=++++||||.|..     .+.+   ++..+..+|.|-||-+--+.     
T Consensus       121 -y~w~------Gda~~~~---~~~~~~~~IElVTSPNNPDG~l-----r~~V---~~g~~~k~I~D~AYYWPhyT-----  177 (363)
T PF04864_consen  121 -YKWA------GDASNFK---NSDNPSPYIELVTSPNNPDGQL-----REAV---LNGSSGKVIHDLAYYWPHYT-----  177 (363)
T ss_dssp             -EEEE------EECCCGT---T-S-CCGEEEEEESS-TTT-----------S---STTTEEEEEEE-TT-STTTS-----
T ss_pred             -cccc------ccHHhhc---cCCCCCCeEEEEeCCCCCcccc-----cchh---cCCCCcceeeeeeeeccccc-----
Confidence             2211      1111111   1111356666789999999982     2233   35556678999999876653     


Q ss_pred             hhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC---h
Q 015283          234 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN---P  310 (410)
Q Consensus       234 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~---~  310 (410)
                        ++   ....+.+|.++|+||.-|-+|-|+||.  +.+++++++++..++..    .+.+.+.-+|.=++.+|+.   .
T Consensus       178 --pI---~~~aD~DiMLFT~SK~TGHAGSR~GWA--lVKD~~Va~kM~~y~~l----nTiGvS~dsQLRa~kiLk~v~~~  246 (363)
T PF04864_consen  178 --PI---TAPADHDIMLFTLSKLTGHAGSRFGWA--LVKDEEVAKKMTKYMEL----NTIGVSRDSQLRALKILKVVLDG  246 (363)
T ss_dssp             --------S-B--SEEEEEHHHHCS-GGG-EEEE--EES-HHHHHHHHHHHHH----HCSS--HHHHHHHHHHHHHHHHH
T ss_pred             --cc---CCCCCCceEEEEEecccCcccccccee--eecCHHHHHHHHHHHHH----hcccCcHHHHHHHHHHHHHHHhc
Confidence              21   123457899999999999999999998  67899988887776652    2335666666555555441   0


Q ss_pred             -hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-------CC---CcccccCCcceeeecCCCH---HHHHHhhhcCc
Q 015283          311 -ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-------GK---DWSFILRQIGMFSFTGLNK---AQSDNMTNKWH  376 (410)
Q Consensus       311 -~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~-------~~---~~~~~~~~~~~~~~~~~~~---~~~~~ll~~~g  376 (410)
                       +-...-.+.++--++..+++-..|.+.+. .-+.       ++   .+.-......-|.|+.+..   +.+...|++.|
T Consensus       247 ~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~-~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~  325 (363)
T PF04864_consen  247 YGTEKGTEDIFHFGYSTMRERWEKLRAAVS-ASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAK  325 (363)
T ss_dssp             CCHHTTTTSHHHHHHHHHHHHHHHHHHHHC-CSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTT
T ss_pred             ccCCCCccchHHHHHHHHHHHHHHHHHHHH-hcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCC
Confidence             00000001122233444445555555554 3221       00   0011112345588987742   35889999999


Q ss_pred             EEEcCCC---------eEEecCCCcccHHHHHHHHHHH
Q 015283          377 VYMTKDG---------RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       377 i~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      |..+.|.         |+|+-. ++++.+.++++|..+
T Consensus       326 I~tr~G~~fga~~ryVRlSml~-~~d~Fd~l~~rL~~l  362 (363)
T PF04864_consen  326 IITRSGVLFGADSRYVRLSMLK-RDDDFDQLLERLSKL  362 (363)
T ss_dssp             EEEEEGGGGTS-TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred             cccCCCCccCCCCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence            9999873         999877 899999999999764

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.59  E-value=3.3e-13  Score=120.93  Aligned_cols=333  Identities=15%  Similarity=0.138  Sum_probs=191.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+-.|..-..-|+.  .|++.+++.+.+..  .....|. ..-..++.+++++.+...      -..+.|  +++|
T Consensus        50 ~ryLD~f~Gi~tvslGHc--hP~v~~a~~kQl~~l~H~t~~~~-~~pi~~~Ae~L~s~~P~~------l~~vfF--~nsG  118 (442)
T KOG1404|consen   50 RRYLDAFGGIVTVSLGHC--HPDVVAAAVKQLKKLYHTTSGYL-NPPIHDLAEALVSKLPGD------LKVVFF--VNSG  118 (442)
T ss_pred             ceeehhhCCeEEEEcCCC--ChHHHHHHHHhhhhhEEeecccc-CCcHHHHHHHHHHhCCCC------ceEEEE--ecCC
Confidence            345666666553344444  58888888877633  2223453 345668999999997554      355888  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcch-hhhhhhCCCCccceee----------ecCC----CcccC---------h
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFNDARVPWSEYRY----------YDPK----TVGLD---------F  167 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~v~~----------~~~~----~~~~d---------~  167 (410)
                      ++|++++.++.+.+...-.++...-+|.+. ...+...|......+.          ..++    -|+-+         .
T Consensus       119 sEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a  198 (442)
T KOG1404|consen  119 SEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYA  198 (442)
T ss_pred             chHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHH
Confidence            999999987777766555666666565443 2222222222211111          0000    01111         1


Q ss_pred             hhHHHHHhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          168 EGMIADIKAA-PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       168 ~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      +++++.+... +.....++.-+.+...|.+- ++--+++..++|+++|.++|.||+..+|+-.   ..+|++..- +-.+
T Consensus       199 ~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRt---G~~wgfe~h-~v~P  274 (442)
T KOG1404|consen  199 KELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRT---GHMWGFESH-GVVP  274 (442)
T ss_pred             HHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccc---ccccccccc-CCCc
Confidence            3444454433 33445555555566667654 5555999999999999999999999999843   366665331 1112


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~  323 (410)
                      +.   -|++|.+| .|+.+|.++.   .+|+..-+.+...  .++++. +|.+.+...+ ..+++.           ++.
T Consensus       275 DI---vTmAKgiG-nG~Pl~AVvt---t~EIa~v~~~~~~--~fnTyggnP~a~avg~aVL~Vike-----------e~L  334 (442)
T KOG1404|consen  275 DI---VTMAKGIG-NGFPLGAVVT---TPEIADVLNQKSS--HFNTYGGNPVACAVGLAVLKVIKE-----------ENL  334 (442)
T ss_pred             cH---HHHHhhcc-CCCcceeeec---CHHHHHHHHhccc--cccccCCCchhHHHHHHHHHHHHH-----------HhH
Confidence            33   38999999 7899999744   6775554444332  233443 4444333222 344333           244


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--------C-----HHHHHHhhhcCcEEEcCCC------e
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--------N-----KAQSDNMTNKWHVYMTKDG------R  384 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~~ll~~~gi~v~~~g------R  384 (410)
                      .++.++...+|.+.|. ++.-..++.-..+..|.++=+.+        .     ...+.+-.++.|+.+-.||      |
T Consensus       335 qE~aa~vG~yl~~~l~-~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfr  413 (442)
T KOG1404|consen  335 QENAAEVGSYLLEKLA-ALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFR  413 (442)
T ss_pred             HHHHHHHHHHHHHHHH-HHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEE
Confidence            5556666666666665 55321112112233444432211        1     1123344456899996665      8


Q ss_pred             EEec-CCCcccHHHHHHHH
Q 015283          385 ISLA-GLSLAKCEYLADAI  402 (410)
Q Consensus       385 is~~-~~~~~~i~~~~~~l  402 (410)
                      |+.+ ..|++|++.+++..
T Consensus       414 iaPPlciT~edi~f~~~~~  432 (442)
T KOG1404|consen  414 IAPPLCITKEDIDFAVEYF  432 (442)
T ss_pred             ecCCeeccHHHHHHHHHHH
Confidence            8743 24999998888754

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.59  E-value=1.3e-13  Score=142.18  Aligned_cols=299  Identities=11%  Similarity=0.030  Sum_probs=186.6

Q ss_pred             ccCcCC---cccH----HHHHHHHHHhcCCCCCcccCCceEEEecCChh----hHHHHHHHHHHHhC-CCC----EEEEc
Q 015283           71 KEYLPI---EGLA----AFNKVTAELLFGADNSVLKEQRVATVQGLSGT----GSLRLAAALIERYF-PGA----KVLIS  134 (410)
Q Consensus        71 ~~y~~~---~g~~----~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt----~a~~~~~~~~~~~~-~gd----~Vl~~  134 (410)
                      |.|.|.   +|+.    ++|+.+++++    |    .+.|.+  +++++    .++.++++.+  +. +||    .|+++
T Consensus       555 hp~~p~~~~~g~~~~~~~~r~~la~i~----g----~~~v~f--~pnaga~ge~a~~~vi~~~--~~~~Gd~~r~~vli~  622 (993)
T PLN02414        555 HPFAPVDQAQGYQEMFEDLGDLLCEIT----G----FDSFSL--QPNAGAAGEYAGLMVIRAY--HLSRGDHHRNVCIIP  622 (993)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHh----C----CCeEEE--cCCCcHHHHHHHHHHHHHH--HhccCCCCCCEEEeC
Confidence            556663   3443    5555666653    3    267888  77777    5666664333  44 488    89999


Q ss_pred             CCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015283          135 SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH  214 (410)
Q Consensus       135 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~  214 (410)
                      ...+......+...|.+++.+++  ++++.+|+++|+++++++.++++++++++|+|-+|.   ..++++|+++|+++|+
T Consensus       623 ~~aH~sn~a~a~~~G~~vv~v~~--d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~---e~~I~eI~~iah~~Ga  697 (993)
T PLN02414        623 VSAHGTNPASAAMCGMKIVVVGT--DAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVY---EEGIDEICDIIHDNGG  697 (993)
T ss_pred             CCcCccCHHHHHHCCCEEEEecc--CCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccc---cchHHHHHHHHHHcCC
Confidence            99999998888889999999998  356689999999999865457788888999999999   5668888888999999


Q ss_pred             cccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc----ccCCCcceEEEEeCCchhHHHHHHHHH-h---
Q 015283          215 IPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAMNVVCSSSDLAARVKSQLK-R---  286 (410)
Q Consensus       215 ~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~l~~~~~~~~~~~~~~~~~~-~---  286 (410)
                      ++++|.++..-... .        ......+.+++++|.+|.|+    ..|-.+|.+.+   .+++...+-.... .   
T Consensus       698 lv~vDgAq~~a~~~-l--------~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~---~~~L~p~lPg~~v~~~~~  765 (993)
T PLN02414        698 QVYMDGANMNAQVG-L--------TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVPTGG  765 (993)
T ss_pred             EEEEEecCHHhccC-c--------CCccccCCCEEEecCCccCCcCcccCCCCeeeEEE---chhhcccCCCCccccCCC
Confidence            99999995321101 0        00123357788899999764    33455788754   5553322221110 0   


Q ss_pred             -hc--cCcccCC---Ch----hHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcc
Q 015283          287 -LA--RPMYSNP---PV----HGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIG  356 (410)
Q Consensus       287 -~~--~~~~~~~---~~----~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~  356 (410)
                       ..  ...+.+.   +.    ....++...+..-.     .+.+++..++...+..++.+.|. +. ..  +.+..+.+.
T Consensus       766 ~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG-----~~Gl~~~a~~a~~nAnYl~~rL~-~~-~~--~~~~~~~~~  836 (993)
T PLN02414        766 IPRPEKTQPLGTISAAPWGSALILPISYTYIAMMG-----SEGLTDASKIAILNANYMAKRLE-GH-YP--VLFRGKNGT  836 (993)
T ss_pred             cccccCCCCcCCccchhhhhHHHHHHHHHHHHHHC-----HhHHHHHHHHHHHHHHHHHHHHH-hh-CC--ccccCCCCC
Confidence             00  0000111   11    11122222222111     34567778888889999999997 52 21  233222222


Q ss_pred             ee-----eecC------CC-HHHHHHhhhcCcEEEc----CCC---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          357 MF-----SFTG------LN-KAQSDNMTNKWHVYMT----KDG---RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       357 ~~-----~~~~------~~-~~~~~~ll~~~gi~v~----~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      .|     -+..      .+ .++.++|+ ++|+...    |..   |++..- .+++++|+++++|+++..+
T Consensus       837 ~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e  907 (993)
T PLN02414        837 CAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE  907 (993)
T ss_pred             eeeeEEEeccccccccCCCHHHHHHHHH-HcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence            11     1111      22 44577777 4688652    322   887543 3889999999999888765

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.58  E-value=6e-13  Score=125.62  Aligned_cols=313  Identities=11%  Similarity=0.025  Sum_probs=179.6

Q ss_pred             CcccccHHHHHHHHHhhccCC-CccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEec-CChhhHHHHHHHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLERGE-NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGTGSLRLAAALIER  124 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~-~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t-~ggt~a~~~~~~~~~~  124 (410)
                      |+..+++++.+++.....+-. ..++.+  ..-+.+.|+.+++++....     ..+|++  + .+||.+++.+  +.+.
T Consensus        10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~-----~~~v~f--~~gs~T~a~~~~--~~~l   80 (361)
T TIGR01366        10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPD-----GYEVIL--GNGGATAFWDAA--TFGL   80 (361)
T ss_pred             CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCC-----CceEEE--ECCchhHHHHHH--HHhc
Confidence            556678999999765321100 122222  3346788888888875421     346776  5 5599999997  3333


Q ss_pred             hCCCCEEEEcCCCCcc-hhhhhhhC--CCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283          125 YFPGAKVLISSPTWGN-HKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ  201 (410)
Q Consensus       125 ~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~  201 (410)
                      +.+ +.+++....|+. +...+...  +.++..++.  +++..++.     .+.   +++.++.+++.+|.||...|.++
T Consensus        81 ~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~pi~~  149 (361)
T TIGR01366        81 IEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTA--DPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAVPVRR  149 (361)
T ss_pred             ccc-cccEEecCHHHHHHHHHHHhhhccCCceEEec--CCCCCCCC-----ccC---CCCCEEEEcccCCccceeccccc
Confidence            433 444444555543 23333431  235666655  22222332     122   36778888999999999887655


Q ss_pred             HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283          202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK  281 (410)
Q Consensus       202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~  281 (410)
                      +      ++++|+++++|.+ +.++..+.+     +.    .  .+++++|..|.+|.+|- ++.+++   +++.++++.
T Consensus       150 I------~~~~g~~~iVDav-qs~g~~~id-----v~----~--~D~~~~s~~K~lg~~~G-l~~~~~---s~~~~~~~~  207 (361)
T TIGR01366       150 P------EGSDDALVVIDAT-SGAGGLPVD-----IA----E--TDVYYFAPQKNFASDGG-LWLAIM---SPAALERIE  207 (361)
T ss_pred             c------cccCCCeEEEEcC-ccccCCCCC-----HH----H--CCEEEEEchhhcCCCCc-eEEEEE---CHHHHhhhh
Confidence            4      5889999999999 555533222     11    1  46788999999988741 333333   666665544


Q ss_pred             HH----------H--H----hhccCcccCCChhHHH-HHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          282 SQ----------L--K----RLARPMYSNPPVHGAR-IVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       282 ~~----------~--~----~~~~~~~~~~~~~~~~-~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ..          +  .    ......+.+.+.+... ++...++.-.     .. .++...++.+++.+++.+.+. +.+
T Consensus       208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~-----~~gg~e~~~~r~~~l~~~l~~~l~-~~~  281 (361)
T TIGR01366       208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMN-----GNGGLDWAVARTADSSSRLYSWAQ-ERP  281 (361)
T ss_pred             cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHH-----HccCHHHHHHHHHHHHHHHHHHHH-hCC
Confidence            21          1  0    0000112233333322 2222222110     11 145667888899999999998 887


Q ss_pred             CCCCccccc----CCcceeeec-CCCHHHHHHhhhcCcEEEcCCC--------eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          344 SGKDWSFIL----RQIGMFSFT-GLNKAQSDNMTNKWHVYMTKDG--------RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       344 ~~~~~~~~~----~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~~g--------Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ....+....    +..+.+.|. +++.+.+...++++||.+.++.        |||..+ .|.++++++++.|+++++++
T Consensus       282 ~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~  361 (361)
T TIGR01366       282 YATPFVTDPGKRSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL  361 (361)
T ss_pred             CcccCCCChhhcccceEEEECCCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence            311111001    111334443 3466665554466799998761        999665 58999999999999998763

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.57  E-value=3.4e-14  Score=133.07  Aligned_cols=214  Identities=18%  Similarity=0.101  Sum_probs=131.8

Q ss_pred             cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC
Q 015283           72 EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP  151 (410)
Q Consensus        72 ~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~  151 (410)
                      -+.|..-+.+..+.+|+.|...       .-..+  ++|+|.++.++  +++.+.+||+|+++.-|+-+....+...|++
T Consensus        61 L~~p~G~I~eAe~~aA~~fGAd-------~t~fl--vnGsT~g~~a~--i~a~~~~gd~VLv~RN~HkSv~~alil~ga~  129 (417)
T PF01276_consen   61 LHDPEGIIKEAEELAARAFGAD-------KTFFL--VNGSTSGNQAM--IMALCRPGDKVLVDRNCHKSVYNALILSGAI  129 (417)
T ss_dssp             TTTTBTHHHHHHHHHHHHHTES-------EEEEE--SSHHHHHHHHH--HHHHTTTTCEEEEETT--HHHHHHHHHHTEE
T ss_pred             ccCCccHHHHHHHHHHHhcCCC-------eEEEE--ecCchHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCe
Confidence            3434444567777777775332       23444  78889999988  6667889999999999999999999999999


Q ss_pred             ccceeeecCC---CcccCh-----hhHHHHHhcCCCCcE---EEEeCCCCCCC--CCCCCHHHHHHHHHHHHHcCCcccc
Q 015283          152 WSEYRYYDPK---TVGLDF-----EGMIADIKAAPGGSF---ILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFF  218 (410)
Q Consensus       152 ~~~v~~~~~~---~~~~d~-----~~l~~~i~~~~~~~~---~ii~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~  218 (410)
                      +++++..+.+   ...++.     +.+++.+++++....   ++++    |||  |.   ..++++|+++|+++++.|++
T Consensus       130 Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt----~PTY~Gv---~~di~~I~~~~h~~~~~llv  202 (417)
T PF01276_consen  130 PVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLT----SPTYYGV---CYDIKEIAEICHKHGIPLLV  202 (417)
T ss_dssp             EEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEE----SS-TTSE---EE-HHHHHHHHCCTECEEEE
T ss_pred             EEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEe----CCCCCeE---EECHHHHHHHhcccCCEEEE
Confidence            9998664222   124556     889999988765544   5554    554  88   44677888889999999999


Q ss_pred             cccCCCCC-CCCCCCchhHhHHHhh--cCCcEEEEecccccccccCCCcceEEEEeCCc-hhHHHHHHHHHhhccCcccC
Q 015283          219 DVAYQGFA-SGSLDNDASSVRLFAT--RGMELLVAQSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSN  294 (410)
Q Consensus       219 Deay~~~~-~~~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~  294 (410)
                      ||||.... |.+....  ......+  ....++++.|.+|.+  +++.-+.++.+..+. -..+++.+.+...+.+..+.
T Consensus       203 DEAhGah~~F~~lp~~--a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY  278 (417)
T PF01276_consen  203 DEAHGAHFGFHPLPRS--ALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSY  278 (417)
T ss_dssp             E-TT-TTGGCSGGGTT--CSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--H
T ss_pred             EccccccccCCCCccc--hhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHH
Confidence            99986543 2111000  0000011  123669999999996  577777776655554 34677777776554322222


Q ss_pred             CChhHHHHHHHHh
Q 015283          295 PPVHGARIVANVV  307 (410)
Q Consensus       295 ~~~~~~~~a~~~l  307 (410)
                      +...+...+...+
T Consensus       279 ~lmASlD~a~~~m  291 (417)
T PF01276_consen  279 PLMASLDVARAQM  291 (417)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            2222334445555

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PLN02263 serine decarboxylase

Probab=99.57  E-value=3e-12  Score=121.96  Aligned_cols=299  Identities=11%  Similarity=0.023  Sum_probs=191.8

Q ss_pred             ccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283           78 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY  157 (410)
Q Consensus        78 g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~  157 (410)
                      +..++.+.+.+|+.+..+.+-+.-.-.+  |+|||+++..+....+...+...|++++-.+.++.+.+..+|.+++.||+
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~v--tsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~  207 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDT  207 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEE--eCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEecc
Confidence            5678999999998877765321113455  89999999998655655555557888999999999999999999999998


Q ss_pred             ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCC-----cccccccCCCCCCCCCCC
Q 015283          158 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH-----IPFFDVAYQGFASGSLDN  232 (410)
Q Consensus       158 ~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~-----~li~Deay~~~~~~~~~~  232 (410)
                        .+++.+|++.|++.+.+...++.+++.+....+||.   .+++++|.++|+++|+     ++.+|.+|.++...... 
T Consensus       208 --d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GA---iDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~-  281 (470)
T PLN02263        208 --LVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGA---VDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK-  281 (470)
T ss_pred             --CCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcC---CCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc-
Confidence              467889999999999764444667766778889999   7888899999999997     99999999887642111 


Q ss_pred             chhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH---HHHhhccCcccCCChhHHHHHH--HHh
Q 015283          233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS---QLKRLARPMYSNPPVHGARIVA--NVV  307 (410)
Q Consensus       233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~--~~l  307 (410)
                      ....+   .....-+-+..+.+|.++.| ...|.+.+  ++ ...+.+..   ++... .. +...+.-+..++.  ..|
T Consensus       282 ~~~~~---df~~~vDSIsvD~HK~l~~P-~~cgvll~--R~-~~~~~~~~~~~Yl~~~-d~-ti~gSR~g~~al~lW~~L  352 (470)
T PLN02263        282 RAPKV---TFKKPIGSVSVSGHKFVGCP-MPCGVQIT--RM-EHINVLSSNVEYLASR-DA-TIMGSRNGHAPIFLWYTL  352 (470)
T ss_pred             ccccc---CCCcCccEEEECCccccCCC-cCEEEEEE--eh-hhHhhhccChHhhCCC-CC-CcCCCCCcHHHHHHHHHH
Confidence            11111   11112344566889988754 77777744  33 32222211   11111 11 1111221111111  111


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCC---e
Q 015283          308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG---R  384 (410)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g---R  384 (410)
                      +...     .+.+++..++..++.+++.+.|+ +.|+   ..+..|.....+|..-..+.    .. .|..+...+   +
T Consensus       353 ~~~G-----~~G~~~~i~~~~~~A~~l~~~l~-~~g~---~~~~~p~s~~V~f~~p~~~~----~~-~gW~L~~~~~~~H  418 (470)
T PLN02263        353 NRKG-----YRGFQKEVQKCLRNAHYLKDRLR-EAGI---SAMLNELSSTVVFERPKDEE----FV-RRWQLACQGNIAH  418 (470)
T ss_pred             HHhC-----HHHHHHHHHHHHHHHHHHHHHHH-hCCC---eEEeCCCceEEEEecCchHH----hh-cceEEccCCCcEE
Confidence            1111     34456777788888899999998 8774   23444555544553222211    12 255554443   7


Q ss_pred             EEecC-CCcccHHHHHHHHHHHhh
Q 015283          385 ISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       385 is~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      +++.. ++.+.++++++.|++..+
T Consensus       419 ivvmphv~~~~id~fi~DL~~~~~  442 (470)
T PLN02263        419 VVVMPSVTIEKLDYFLKELVEKRS  442 (470)
T ss_pred             EEEcCCCCHHHHHHHHHHHHHHHh
Confidence            77554 588999999999988765

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.57  E-value=7.8e-13  Score=121.42  Aligned_cols=171  Identities=19%  Similarity=0.165  Sum_probs=120.7

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      .+....+.+.+++....        .+.++  .++|+.|+..+  +...+.+|++|++.+.+|.....+++    ..|.+
T Consensus        76 nPt~~~le~~iaal~ga--------~~~l~--fsSGmaA~~~a--l~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie  143 (409)
T KOG0053|consen   76 NPTRDVLESGIAALEGA--------AHALL--FSSGMAAITVA--LLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGE  143 (409)
T ss_pred             CCchHHHHHHHHHHhCC--------ceEEE--ecccHHHHHHH--HHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCce
Confidence            34456788888887422        23444  69999999888  45557799999999999999877766    45656


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      ...+..       -|++++++.+++   ++.++++-+|.||+..+.   |++++.++|+++|+++|+|+.+.....    
T Consensus       144 ~~~vd~-------~~~~~~~~~i~~---~t~~V~~ESPsNPll~v~---DI~~l~~la~~~g~~vvVDnTf~~p~~----  206 (409)
T KOG0053|consen  144 GDFVDV-------DDLKKILKAIKE---NTKAVFLESPSNPLLKVP---DIEKLARLAHKYGFLVVVDNTFGSPYN----  206 (409)
T ss_pred             eeeech-------hhHHHHHHhhcc---CceEEEEECCCCCccccc---cHHHHHHHHhhCCCEEEEeCCcCcccc----
Confidence            655554       156777777775   788899999999999955   566677778999999999999876642    


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ  283 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~  283 (410)
                      .+++       ..+.+|++.|.+|.++-.+-=+|.++ +.+.++...+++..
T Consensus       207 ~~pL-------~lGADIV~hSaTKyi~Ghsdvi~G~i-v~n~~~~~~~l~~~  250 (409)
T KOG0053|consen  207 QDPL-------PLGADIVVHSATKYIGGHSDVIGGSV-VLNSEELASRLKFL  250 (409)
T ss_pred             cChh-------hcCCCEEEEeeeeeecCCcceeeeEE-ecCcHHHHHHHHHH
Confidence            1222       12368999999999964444344442 34446755555443

>PRK15029 arginine decarboxylase; Provisional

Probab=99.55  E-value=7.1e-13  Score=133.10  Aligned_cols=218  Identities=13%  Similarity=0.051  Sum_probs=134.8

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV  150 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~  150 (410)
                      .-+.|..-+.+..+.+|+.|...       .-..+  ++|+|.++.++  +++.+.+||+|+++.-||-+....+...|+
T Consensus       199 ~L~~p~G~I~eAq~~aA~~fgA~-------~t~Fl--vNGST~gn~a~--i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga  267 (755)
T PRK15029        199 SLLDHTGAFGESEKYAARVFGAD-------RSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLILTGA  267 (755)
T ss_pred             CCCCCCcHHHHHHHHHHHHhCCC-------cEEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCC
Confidence            33434444456666666665332       22333  68999998877  666788999999999999999999999999


Q ss_pred             CccceeeecCCCc----ccC-----hhhHHHHHhcCCCCc--------EEEEeCCCCCCC--CCCCCHHHHHHHHHHHHH
Q 015283          151 PWSEYRYYDPKTV----GLD-----FEGMIADIKAAPGGS--------FILLHGCAHNPT--GIDPTPEQWEKIADVIQE  211 (410)
Q Consensus       151 ~~~~v~~~~~~~~----~~d-----~~~l~~~i~~~~~~~--------~~ii~~~p~NPt--G~~~~~~~l~~i~~~~~~  211 (410)
                      ++++++-.- +.+    .++     ++.+++.+.+++...        .++++    |||  |++.   ++++|+++|++
T Consensus       268 ~Pvyl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt----~PTY~Gv~~---di~~I~~~~h~  339 (755)
T PRK15029        268 KPVYMVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVT----NCTYDGVCY---NAKEAQDLLEK  339 (755)
T ss_pred             eEEEecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEE----CCCCcceee---CHHHHHHHHHh
Confidence            999884321 222    334     888988887754332        34443    554  8855   56677888999


Q ss_pred             cCCcccccccCCCCC-CCCCCCchhHhHH-Hhh-cCCcEEEEecccccccccCCCcceEEEEeCCc--hhHHHHHHHHHh
Q 015283          212 KNHIPFFDVAYQGFA-SGSLDNDASSVRL-FAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSSS--DLAARVKSQLKR  286 (410)
Q Consensus       212 ~~~~li~Deay~~~~-~~~~~~~~~~~~~-~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~--~~~~~~~~~~~~  286 (410)
                      +++.|++||||.... +.+.-+....+.. ... .+.+++++.|.+|++  |++.-|.++.+.++.  -..+++...+..
T Consensus       340 ~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~~  417 (755)
T PRK15029        340 TSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMM  417 (755)
T ss_pred             cCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHHH
Confidence            999999999986543 3211010011100 001 223569999999996  567777765553331  123567777765


Q ss_pred             hccCcccCCChhHHHHHHHHhCC
Q 015283          287 LARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       287 ~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                      ++.+..+.+...+..++...+..
T Consensus       418 ~qSTSPSY~LmASLD~ar~~m~~  440 (755)
T PRK15029        418 HATTSPLYAICASNDVAVSMMDG  440 (755)
T ss_pred             HcCCCcHHHHHHHHHHHHHHHhh
Confidence            54332223333344445555553

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.55  E-value=2.2e-12  Score=124.02  Aligned_cols=218  Identities=15%  Similarity=0.083  Sum_probs=141.4

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      ++||..--.++++.+.+++++.+.+++.+.+.......|.-     ..-+..+++.+++++...       . .++  ++
T Consensus        75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae-------~-alv--v~  144 (454)
T TIGR00474        75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE-------D-ALV--VN  144 (454)
T ss_pred             ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC-------c-EEE--EC
Confidence            56776544667788888889999999988775422122211     112468888898886332       2 334  57


Q ss_pred             ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc------hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          110 SGTGSLRLAAALIERYFPGAKVLISSPTWGN------HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      +|+.|+.++   +..+.+||+|+++...|..      +...++..|++++.++..+    ..+++++++.+++   ++++
T Consensus       145 sg~aAi~l~---l~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~---~T~l  214 (454)
T TIGR00474       145 NNAAAVLLA---LNTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITE---NTAL  214 (454)
T ss_pred             CHHHHHHHH---HHHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCc---CCEE
Confidence            888888776   3457899999999866422      2345567899888886522    2478899988875   6888


Q ss_pred             EEeCCCCCCC--CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC---CCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          184 LLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS---LDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       184 ii~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      ++..+++|++  |.. ...++++|+++|++||+++++|.+...+...+   ....+ .+.... ..+.+++++|.+|.+|
T Consensus       215 v~~~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p-~~~~~~-~~GaDiv~fSg~K~Lg  291 (454)
T TIGR00474       215 LLKVHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEP-TVQEVI-AAGVDLVTFSGDKLLG  291 (454)
T ss_pred             EEEEccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCc-ccccHh-HcCCCEEEecCccccC
Confidence            8888999996  531 13467788888999999999998632221100   00001 111111 2245688999999986


Q ss_pred             ccCCCcceEEEEeCCchhHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      -|  ..|++++   +++.++++
T Consensus       292 Gp--~~G~i~g---~~~~i~~l  308 (454)
T TIGR00474       292 GP--QAGIIVG---KKELIERL  308 (454)
T ss_pred             CC--eEEEEEE---CHHHHHhh
Confidence            44  3687644   66765544

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.53  E-value=1.9e-12  Score=124.80  Aligned_cols=335  Identities=13%  Similarity=0.100  Sum_probs=178.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHh-hccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLM-LERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~-~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+. ....  +...| ......++.+.+++.+.....  -..+.+.+  +++
T Consensus        58 ~~ylD~~sg~~~~~lGh~--~p~i~~Ai~~q~~~~~l~~~~~~-~~~~~~~la~~l~~~l~~~~p--~~~~~v~f--~~S  130 (464)
T TIGR00699        58 NRLLDLYSQISSIPIGYN--NPALLKAAQSPEMATTLINRPAL-GNFPSKDWAKILKEGILKVAP--KGQDQVWT--GMS  130 (464)
T ss_pred             CEEEEccCCHhhhcCCCC--CHHHHHHHHHHHHHHhhcccccC-CcHHHHHHHHHHHHhHHhhCC--CCcCEEEE--eCC
Confidence            467888887654455654  58888888763 2221  11222 122233455554432222111  01367889  999


Q ss_pred             hhhHHHHHHHHHHHhC------------------------CC---CEEEEcCCCCcchhhh-hhhCCC-----------C
Q 015283          111 GTGSLRLAAALIERYF------------------------PG---AKVLISSPTWGNHKNI-FNDARV-----------P  151 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~------------------------~g---d~Vl~~~p~y~~~~~~-~~~~g~-----------~  151 (410)
                      |++|++.+.++.+.+.                        +|   .+|+....+|.+.... +...|.           .
T Consensus       131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~  210 (464)
T TIGR00699       131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD  210 (464)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence            9999999988886541                        11   2688888888655332 211111           0


Q ss_pred             ccceeeecCC-C-----------cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccc
Q 015283          152 WSEYRYYDPK-T-----------VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFF  218 (410)
Q Consensus       152 ~~~v~~~~~~-~-----------~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~  218 (410)
                      +..+|..... .           ..-+++.+++.+.+.++...++++...+...|... +.+-++++.++|++||+++|+
T Consensus       211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~  290 (464)
T TIGR00699       211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV  290 (464)
T ss_pred             ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            1111111000 0           00135667777765444567777666677778777 455599999999999999999


Q ss_pred             cccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCCh
Q 015283          219 DVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPV  297 (410)
Q Consensus       219 Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (410)
                      ||++.+|+..   ...+....+.-. .++++   +++|.++..|    ++  +. .+.    +.........+++. .+.
T Consensus       291 DEV~tGfGrt---G~~fa~e~~gv~~~PDi~---t~gK~lg~gG----~~--~~-~~~----~~~~~~~~~~~T~~-gnp  352 (464)
T TIGR00699       291 DEVQTGVGAT---GKFWAHEHWNLDDPPDMV---TFSKKFQTAG----YF--FH-DPA----FRPNKPYRQFNTWM-GDP  352 (464)
T ss_pred             eeeeeCCCCC---cchhHHHhcCCCCCCCEE---EehhhhccCC----cc--cc-chh----ccCCCCcccccCCC-CCH
Confidence            9999888642   233333222111 13443   6799985334    32  11 221    11100111222332 333


Q ss_pred             hHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC--ccccc-CCcceeeecCC-C----HH
Q 015283          298 HGARIVA---NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD--WSFIL-RQIGMFSFTGL-N----KA  366 (410)
Q Consensus       298 ~~~~~a~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~~-~~~~~~~~~~~-~----~~  366 (410)
                      ++..++.   ..+.++           ...++.++..+++.+.|+ ++....+  +.... ...|.+.-+.+ +    ..
T Consensus       353 ~~~aaa~a~L~~l~~~-----------~l~~~~~~~g~~l~~~L~-~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~  420 (464)
T TIGR00699       353 SRALILREIIQEIKRK-----------DLLENVAHVGDYLYTGLE-DLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDK  420 (464)
T ss_pred             HHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHHHH-HHHHhCCCceeeecccCeEEEEEEecCCHHHHHH
Confidence            3333333   333332           233445555555555555 4421011  11121 02344433333 2    22


Q ss_pred             HHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHh
Q 015283          367 QSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       367 ~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                      +...+++ .|+++.+.|    ||..+. +++++++.++++|.+++
T Consensus       421 i~~~~~~-~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       421 LLKKARN-NGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             HHHHHHH-CCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence            3455555 599998765    776443 59999999999998874

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.53  E-value=1.8e-13  Score=124.59  Aligned_cols=330  Identities=13%  Similarity=0.056  Sum_probs=197.0

Q ss_pred             CeeeeeeeeeecCCC-cccccHHHHHHHHHhhcc-C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           35 KKLNLGVGAYRTEEL-QPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~-~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ..+||++=.|+.-.. ..+..+.+.+++...--+ . ..+.-+...-+.++.+.+|+++ +.      ++.++|   +-|
T Consensus       137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~-g~------e~a~vF---~mG  206 (519)
T KOG1357|consen  137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFL-GV------EDAIVF---SMG  206 (519)
T ss_pred             eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhc-CC------cceEEE---ecc
Confidence            568888765543221 123457777777765422 1 1111112233456777777774 32      566777   444


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----C------CCc
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----P------GGS  181 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~------~~~  181 (410)
                      -+++.+.  +-..+.||.-|+-.+..+.+.+.-++..|+.++-+.++       |..+||+.+++.    +      -+.
T Consensus       207 f~TNs~~--~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kk  277 (519)
T KOG1357|consen  207 FATNSMN--IPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKK  277 (519)
T ss_pred             ccccccC--cceeecCCcceeeccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchh
Confidence            4444443  23346798888888889999998889999998888873       556666665541    1      123


Q ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH--hhcCCcEEEEecccccccc
Q 015283          182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~~~~  259 (410)
                      .+++......--|.   ..++.+++.++++|..+++.||+++.-..+.   ..-++-.+  .+..+.+|.+++|+|++|.
T Consensus       278 i~iivegiysmEg~---iv~Lp~vvalkkkykayl~lDEAHSiGA~g~---tGrgvce~~g~d~~dvDImMGtftKSfga  351 (519)
T KOG1357|consen  278 ILICVEGIYSMEGT---IVDLPEVVALKKKYKAYLYLDEAHSIGAMGA---TGRGVCEYFGVDPEDVDIMMGTFTKSFGA  351 (519)
T ss_pred             eeeeeccceeccCe---ecccHHHHHhhccccEEEEeeccccccccCC---CCcceeeccCCCchhheeecceehhhccc
Confidence            34443333333344   6778899999999999999999977554321   11122222  2234578999999999998


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH--HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      .|   ||+   .+++++++.++..-..... ..+.++.++|+..  ...+.....    .+.-++..+++++++.+++..
T Consensus       352 ~G---Gyi---agsk~lid~lrt~s~~~~y-at~~sppvaqq~~ssl~~i~G~dg----t~~g~~k~~~l~~ns~yfr~~  420 (519)
T KOG1357|consen  352 AG---GYI---AGSKELIDYLRTPSPSALY-ATSLSPPVAQQILTSVKHIMGEDG----TNRGRQKIERLAENSRYFRWE  420 (519)
T ss_pred             cc---cee---cCcHHHHhhhccCCCceee-cccCChHHHHHHHHHHHhhcCCCc----ccHHHHHHHHHHhhhHHHHHh
Confidence            77   885   4488844443322111111 1234555555554  333332221    233467778899999999999


Q ss_pred             hhhccCCCCCcccccCCccee----eec-CCCHHHHHHhhhcCcEEEcCCC-----------eEEecC-CCcccHHHHHH
Q 015283          338 LSAKDKSGKDWSFILRQIGMF----SFT-GLNKAQSDNMTNKWHVYMTKDG-----------RISLAG-LSLAKCEYLAD  400 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~----~~~-~~~~~~~~~ll~~~gi~v~~~g-----------Ris~~~-~~~~~i~~~~~  400 (410)
                      ++ ..|+    .+.....+..    ++. .....+-++++++ ++.++..|           |++.+. .+.|+++++++
T Consensus       421 l~-~~gf----ivyG~~dSpVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~  494 (519)
T KOG1357|consen  421 LQ-KMGF----IVYGNNDSPVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALE  494 (519)
T ss_pred             hh-cCcE----EEecCCCCCcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHH
Confidence            98 8873    3333333321    111 1234556677774 55554332           787664 58899999999


Q ss_pred             HHHHHh
Q 015283          401 AIIDSY  406 (410)
Q Consensus       401 ~l~~~l  406 (410)
                      .+.++-
T Consensus       495 ~i~~~g  500 (519)
T KOG1357|consen  495 VIDRVG  500 (519)
T ss_pred             HHhhhc
Confidence            887763

>PLN02590 probable tyrosine decarboxylase

Probab=99.52  E-value=2.2e-11  Score=119.09  Aligned_cols=333  Identities=11%  Similarity=0.022  Sum_probs=197.2

Q ss_pred             HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCccc-----CCceEEEecCChhhHHHHHHHHHHHh--C-
Q 015283           55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIERY--F-  126 (410)
Q Consensus        55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~-----~~~i~~~~t~ggt~a~~~~~~~~~~~--~-  126 (410)
                      ..+-+.+...++... ..|.......++.+.+.+|+.+..+.+-.     ...-.+  ++|||+|+..+....+..  . 
T Consensus       145 ~~lgd~l~sa~n~~~-~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~al~aAR~~~~~~  221 (539)
T PLN02590        145 GFLGEMLNAGLSVVG-FTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVVVLAARDRILKK  221 (539)
T ss_pred             HHHHHHHHHhccccc-CCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHHHHHHHHHHHhh
Confidence            344455555554332 45555667789999999998887776421     022455  899999987764333331  0 


Q ss_pred             ------CCCEEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCC
Q 015283          127 ------PGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTG  194 (410)
Q Consensus       127 ------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG  194 (410)
                            +.-.|++++-++.+..+.+..+|.   +++.||+...+++.+|++.|++.|.+.   +..+.+++-+.....||
T Consensus       222 ~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tG  301 (539)
T PLN02590        222 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSA  301 (539)
T ss_pred             hcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCc
Confidence                  111455577788889999998887   578888743356889999999998652   23456666566677788


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      .   .+++++|+++|++||+|+.+|.||.++...  .+   ..+.+.. ...-+-+..+.+|.+..| .-.|.+  .+++
T Consensus       302 a---iDpl~~Ia~i~~~~g~WlHVDaA~GG~al~--~~---~~r~~~~Gie~ADSit~D~HK~l~~p-~~cg~l--lvr~  370 (539)
T PLN02590        302 A---VDPLVPLGNIAKKYGIWLHVDAAYAGNACI--CP---EYRKFIDGIENADSFNMNAHKWLFAN-QTCSPL--WVKD  370 (539)
T ss_pred             c---cCCHHHHHHHHHHhCCeEEEecchhhhhhc--Ch---hhHHHhcCCccCCEEEECchhhcCcC-cCEEEE--EecC
Confidence            8   788899999999999999999999987632  11   1222222 122345566899988644 666776  4444


Q ss_pred             chh-HHHHH---HHHHhhc--------cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283          274 SDL-AARVK---SQLKRLA--------RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK  341 (410)
Q Consensus       274 ~~~-~~~~~---~~~~~~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  341 (410)
                      +.. .+.+.   .++....        ...|.-..+....++..++.   ++..-.+.++++.++.-+..+++.+.++ +
T Consensus       371 ~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~---lr~~G~~G~~~~i~~~~~lA~~~~~~l~-~  446 (539)
T PLN02590        371 RYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMV---LRLYGSENLRNFIRDHVNLAKHFEDYVA-Q  446 (539)
T ss_pred             HHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence            432 12221   1111000        00111111111122221111   1111134566777777888888888887 6


Q ss_pred             cCCCCCcccc-cCCcceeee--cC--CC--------HHHHHHhhhcCcEEEcCC---C----eEEecC--CCcccHHHHH
Q 015283          342 DKSGKDWSFI-LRQIGMFSF--TG--LN--------KAQSDNMTNKWHVYMTKD---G----RISLAG--LSLAKCEYLA  399 (410)
Q Consensus       342 ~g~~~~~~~~-~~~~~~~~~--~~--~~--------~~~~~~ll~~~gi~v~~~---g----Ris~~~--~~~~~i~~~~  399 (410)
                      .+-   +++. ++.-+...|  .+  .+        ..+.+++.+...+++.+.   |    |+++.+  .++++++.++
T Consensus       447 ~~~---fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~  523 (539)
T PLN02590        447 DPS---FEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAW  523 (539)
T ss_pred             CCC---eEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHH
Confidence            541   4433 333333322  22  11        233445555444555543   3    998775  2788999999


Q ss_pred             HHHHHHhhh
Q 015283          400 DAIIDSYHN  408 (410)
Q Consensus       400 ~~l~~~l~~  408 (410)
                      +.|.+...+
T Consensus       524 ~~i~~~a~~  532 (539)
T PLN02590        524 QIIQKHASK  532 (539)
T ss_pred             HHHHHHHHH
Confidence            999887654

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.52  E-value=2.7e-12  Score=123.93  Aligned_cols=334  Identities=11%  Similarity=0.048  Sum_probs=171.6

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHH--HHHHHhhccCC--CccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVK--KAENLMLERGE--NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~--~a~~~~~~~~~--~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +...||+..|..-...|+.  .|.+.  +++.+++....  ...+  ....-..++.+.+++.....     ..+.+.+ 
T Consensus        37 G~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~~v~f-  108 (431)
T TIGR03251        37 GRRYLDMFSFFASMALGMN--HPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDP-----ALPHLFF-  108 (431)
T ss_pred             CCChhhcccChhhcCCCCC--ChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCC-----CcCEEEE-
Confidence            4567888877653455655  47777  77777664321  0111  11112223333334432111     1367888 


Q ss_pred             ecCChhhHHHHHHHHHHHhC------C------CCEEEEcCCCCcchhhh-hhhCCCC-cc----------c--eeee--
Q 015283          107 QGLSGTGSLRLAAALIERYF------P------GAKVLISSPTWGNHKNI-FNDARVP-WS----------E--YRYY--  158 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~------~------gd~Vl~~~p~y~~~~~~-~~~~g~~-~~----------~--v~~~--  158 (410)
                       +++|++|++.+.++.+.+.      .      +.+|+...-+|.+.... +...|.. ..          .  .|..  
T Consensus       109 -~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~  187 (431)
T TIGR03251       109 -IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTF  187 (431)
T ss_pred             -eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccC
Confidence             9999999999998887653      1      36799888877655322 2222211 00          0  1100  


Q ss_pred             c--CCCc-------ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283          159 D--PKTV-------GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASG  228 (410)
Q Consensus       159 ~--~~~~-------~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~  228 (410)
                      +  .+..       .-+++.+++.+...+++...+++...+.-.|... +++.+++|.++|++||+++|+||++.+|+..
T Consensus       188 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Grt  267 (431)
T TIGR03251       188 PLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLT  267 (431)
T ss_pred             CccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCcc
Confidence            0  0000       0134455566655445667777666677778764 5666999999999999999999999988743


Q ss_pred             CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH--hhccCcccCCChhHHHHHH--
Q 015283          229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK--RLARPMYSNPPVHGARIVA--  304 (410)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~--  304 (410)
                         ...+....+ +..++++   .++|.+  +.  .|++   . .+++.+.....+.  .....+++ .+.++..++.  
T Consensus       268 ---G~~~a~~~~-gv~PDi~---~~gK~~--~~--~g~~---~-~~~i~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~  331 (431)
T TIGR03251       268 ---GTAWAYQQL-GVQPDIV---AFGKKT--QV--CGIM---A-GRRVDEVADNVFAVPSRLNSTWG-GNLVDMVRATRI  331 (431)
T ss_pred             ---chHHHHHhc-CCCCCEE---EecccC--cc--ceEE---e-cchHHHhhhhcccCccccCCCCC-CCHHHHHHHHHH
Confidence               223332222 2233444   478876  21  2443   2 2221111110111  11222332 3333333333  


Q ss_pred             -HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC--cccccCCcceeeecCC-C----HHHHHHhhhcCc
Q 015283          305 -NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD--WSFILRQIGMFSFTGL-N----KAQSDNMTNKWH  376 (410)
Q Consensus       305 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~~~~~~~~~~~~~-~----~~~~~~ll~~~g  376 (410)
                       ..+.+.+           ..++.+++.+++.+.|+ ++.....  +...... |.+..+.+ +    ..+..++++ +|
T Consensus       332 L~~l~~~~-----------l~~~~~~~g~~l~~~L~-~l~~~~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~-~G  397 (431)
T TIGR03251       332 LEIIEEER-----------LVDNARVQGAHLLARLH-ELAAEFPHLVSNPRGR-GLMCAFDLPSTADRDEVIRQLYR-EG  397 (431)
T ss_pred             HHHHHhcC-----------HHHHHHHHHHHHHHHHH-HHHHhCccceeccccc-ceeEEEEeCCHHHHHHHHHHHHh-CC
Confidence             3332222           22233334444444443 3210000  1112222 44433333 1    234555654 69


Q ss_pred             EEEcCCC----eEEecC-CCcccHHHHHHHHHHH
Q 015283          377 VYMTKDG----RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       377 i~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                      |++.+.+    ||+.+. .+++++++++++|.++
T Consensus       398 vl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~~  431 (431)
T TIGR03251       398 VLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV  431 (431)
T ss_pred             eEEecCCCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence            9998765    776443 4899999999999864

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PLN02880 tyrosine decarboxylase

Probab=99.51  E-value=8.5e-12  Score=121.78  Aligned_cols=330  Identities=9%  Similarity=0.036  Sum_probs=190.7

Q ss_pred             HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCccc-----CCceEEEecCChhhHHHHHHHHHHHh--C-
Q 015283           55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIERY--F-  126 (410)
Q Consensus        55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~-----~~~i~~~~t~ggt~a~~~~~~~~~~~--~-  126 (410)
                      ..+.+.+...++... ..|.......++.+.+.+|+.+..|.+-.     ...-.+  |+|||+++..+..+.+..  . 
T Consensus        97 ~~lad~l~~~~n~~~-~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~al~~AR~~~~~~  173 (490)
T PLN02880         97 GFLGEMLSAGLNIVG-FSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVVLLAARDRVLRK  173 (490)
T ss_pred             HHHHHHHHHhhccCC-cccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHHHHHHHHHHHHH
Confidence            344444555444322 44544456778999999998877765421     012455  899999987764444321  1 


Q ss_pred             C-----CC-EEEEcCCCCcchhhhhhhCCCC---ccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCCC
Q 015283          127 P-----GA-KVLISSPTWGNHKNIFNDARVP---WSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTG  194 (410)
Q Consensus       127 ~-----gd-~Vl~~~p~y~~~~~~~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPtG  194 (410)
                      .     .. .|++++-++.+..+.+...|..   ++.||+.+.+++.+|++.|++.+.+   .+..+.+++-+....+||
T Consensus       174 ~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~G  253 (490)
T PLN02880        174 VGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSST  253 (490)
T ss_pred             hcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCc
Confidence            1     12 4556777888999999999984   6778874345678999999998864   233456666666788889


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      .   .+++++|+++|++||+++.+|.+|.++...   .+  ..+..... ...+.+..+++|.++. ....|.+.+  ++
T Consensus       254 a---iDpl~eI~~i~~~~~iwlHVDaA~gg~~~~---~~--~~~~~l~gie~aDSit~d~HKwl~~-P~~~g~llv--r~  322 (490)
T PLN02880        254 A---VDPLLELGKIAKSNGMWFHVDAAYAGSACI---CP--EYRHYIDGVEEADSFNMNAHKWFLT-NFDCSLLWV--KD  322 (490)
T ss_pred             c---cCcHHHHHHHHHHcCCEEEEehhhHHHHHh---CH--HHHHHhcCchhcCEEEECchhhcCC-CccEEEEEE--eC
Confidence            8   556778888899999999999998876532   11  12222221 2346777899999864 476787744  33


Q ss_pred             chh-HHHHHHHHHhhccC------------cccCCChhHHHHHHH--HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283          274 SDL-AARVKSQLKRLARP------------MYSNPPVHGARIVAN--VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL  338 (410)
Q Consensus       274 ~~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  338 (410)
                      ... .+.+.... .+...            .+.-....-..++..  .|+...     .+.++++.++.-+.++++.+.+
T Consensus       323 ~~~l~~~~~~~~-~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G-----~~g~~~~i~~~~~lA~~~~~~l  396 (490)
T PLN02880        323 RNALIQSLSTNP-EFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYG-----VENLQSYIRNHIKLAKEFEQLV  396 (490)
T ss_pred             HHHHHHHHccCH-HHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHH
Confidence            321 11111100 01000            000000000011111  111111     2233444555557888888888


Q ss_pred             hhccCCCCCccccc-CCcceeee--cCC--C--------HHHHHHhhhcCcEEEcCC---C----eEEecCC--CcccHH
Q 015283          339 SAKDKSGKDWSFIL-RQIGMFSF--TGL--N--------KAQSDNMTNKWHVYMTKD---G----RISLAGL--SLAKCE  396 (410)
Q Consensus       339 ~~~~g~~~~~~~~~-~~~~~~~~--~~~--~--------~~~~~~ll~~~gi~v~~~---g----Ris~~~~--~~~~i~  396 (410)
                      + +...   +++.. +..+...|  .+.  +        ..+.+++.++..+++.+.   |    |+++.+.  ++++++
T Consensus       397 ~-~~~~---~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~  472 (490)
T PLN02880        397 A-QDSR---FEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVT  472 (490)
T ss_pred             h-cCCC---EEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHH
Confidence            7 5531   34333 33333322  221  1        234456655566666543   2    9987652  568999


Q ss_pred             HHHHHHHHHhhh
Q 015283          397 YLADAIIDSYHN  408 (410)
Q Consensus       397 ~~~~~l~~~l~~  408 (410)
                      .+++.|.++.++
T Consensus       473 ~~~~~i~~~~~~  484 (490)
T PLN02880        473 AAWKVLQDEASK  484 (490)
T ss_pred             HHHHHHHHHHHH
Confidence            999999887654

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.49  E-value=1.6e-11  Score=109.82  Aligned_cols=165  Identities=19%  Similarity=0.117  Sum_probs=125.7

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~  150 (410)
                      ..+....+.+.|+.+-.+          +..+.+++|+.|+..+  +++...+||.|+-.+--|++..    ..++..|.
T Consensus        60 ~NPT~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~a--i~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi  127 (426)
T COG2873          60 MNPTTDVLEERIAALEGG----------VAALAVASGQAAITYA--ILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGI  127 (426)
T ss_pred             cCchHHHHHHHHHHhhcc----------hhhhhhccchHHHHHH--HHHhccCCCeeEeeccccCchHHHHHHHHHhcCc
Confidence            345677899999998322          2223369999999988  6777889999999987776654    45567888


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++-       .|++.+++.+++   ++++++.-+..||-+.++   |+++|+++|+++|+++|+|..+..-..   
T Consensus       128 ~v~fvd~-------~d~~~~~~aI~~---nTkavf~EtigNP~~~v~---Die~ia~iAh~~gvpliVDNT~atpyl---  191 (426)
T COG2873         128 EVRFVDP-------DDPENFEAAIDE---NTKAVFAETIGNPGLDVL---DIEAIAEIAHRHGVPLIVDNTFATPYL---  191 (426)
T ss_pred             EEEEeCC-------CCHHHHHHHhCc---ccceEEEEeccCCCcccc---CHHHHHHHHHHcCCcEEEecCCCccee---
Confidence            8888864       378999999986   888999899999999965   566888889999999999999654221   


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD  275 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~  275 (410)
                            ++++  +..-.|++.|.||.+|-.|--+|.+++-.++-+
T Consensus       192 ------~rP~--~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FD  228 (426)
T COG2873         192 ------CRPI--EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFD  228 (426)
T ss_pred             ------cchh--hcCCCEEEEeecccccCCccccceEEEeCCccc
Confidence                  1111  234678899999999988988999876444444

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.47  E-value=9e-12  Score=119.69  Aligned_cols=274  Identities=13%  Similarity=0.024  Sum_probs=175.6

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hC-
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YF-  126 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~-  126 (410)
                      +++.+++...+++...+..+. ....-..+..++.+.+..++....+.+. .---.+  |+|||+++.++..+.+. +. 
T Consensus        70 ~~~~~~~~a~~~~~~~~~~nl-~d~~~~p~a~~~E~~~v~~l~~l~~~~~-~~~G~~--t~GgTean~lal~aar~~~~~  145 (460)
T COG0076          70 CPTRVPPVAAELLVSALNKNL-GDPDESPAAAELEERVVNMLSDLLGAPE-EASGTF--TSGGTEANLLALLAARERWRK  145 (460)
T ss_pred             CCCCCHHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCCCC-CCceEE--EcChHHHHHHHHHHHHHHHHH
Confidence            445556777787777765533 2121223677888888888877776642 222345  89999999987555543 21 


Q ss_pred             -C---CC------EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE--EEeCCCCCCCC
Q 015283          127 -P---GA------KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI--LLHGCAHNPTG  194 (410)
Q Consensus       127 -~---gd------~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~--ii~~~p~NPtG  194 (410)
                       .   +.      .|+++.-.+.++.+.++..|...+.+++.+. +..+|++++++++.+   .+..  ++.+.+..+||
T Consensus       146 ~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~---~t~~g~vV~~aGtT~~G  221 (460)
T COG0076         146 RALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDE---NTIGGVVVGTAGTTDTG  221 (460)
T ss_pred             HhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHh---hccCceEEEEecCCCCC
Confidence             1   11      6999999999999999999999999998544 788999999999987   3332  55566888999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .   .+++++|.++|+++++++.+|.||.++...-.+.+..   .......-+-+..+++|... .-...||+  +.+++
T Consensus       222 ~---iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~---~~f~l~~vdSIt~d~HK~g~-aP~~~G~i--l~rd~  292 (460)
T COG0076         222 S---IDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR---WDFGLEGVDSITVDGHKYGL-APIGCGVV--LFRDE  292 (460)
T ss_pred             c---cCCHHHHHHHHHHcCCcEEEEccccceeecccCccch---hhcCCCCceEEEECcccccC-CCCCceEE--EEECH
Confidence            9   8889999999999999999999999887421111111   01112224455668999764 44778998  45666


Q ss_pred             hhHHHHHHHHHhhcc-----CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          275 DLAARVKSQLKRLAR-----PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      +...+.......+..     +.....+..+..++..+.   .+.....+.++++.++..+..+++.+.|. +.|
T Consensus       293 e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~---~l~~lG~eGy~~l~~~~~~~a~~la~~l~-~~~  362 (460)
T COG0076         293 EALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYA---NLRRLGREGYRKLLDRTLELARYLAEELE-KLG  362 (460)
T ss_pred             HHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHH---HHHHhCHhHHHHHHHHHHHHHHHHHHHHH-hCC
Confidence            433332221111111     111122222212221111   11111235567888888899999999998 776

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.46  E-value=1.4e-11  Score=115.61  Aligned_cols=304  Identities=14%  Similarity=0.038  Sum_probs=179.2

Q ss_pred             cHH-HHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCc--eEEEecCChhhHHHHHHHHHHHhC-C
Q 015283           54 LDV-VKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQR--VATVQGLSGTGSLRLAAALIERYF-P  127 (410)
Q Consensus        54 ~~~-v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~--i~~~~t~ggt~a~~~~~~~~~~~~-~  127 (410)
                      -|. ..+++.+.+-.  ..++.+  ..-..+.++.+.+.+...      .+.  +++  +.+||++.+.+  +.+.+. +
T Consensus        15 ~~~~~~~~~~~~~~~--~~HRs~~F~~i~~e~~~~L~~l~~~~------~~~~v~~l--~GsGT~a~Eaa--~~nl~~~~   82 (374)
T TIGR01365        15 RPGWSIEELKNAPLG--RSHRSKLGKEKLAEAIKKTREMLGVP------ADYLIGIV--PASDTGAVEMA--LWSMLGCR   82 (374)
T ss_pred             CchhhHHHHhhhhcc--cCcCCHHHHHHHHHHHHHHHHHhCCC------CCcEEEEE--CCchHHHHHHH--HHHcCCCC
Confidence            344 55666654433  122322  112334455555554321      233  344  89999999998  666674 8


Q ss_pred             CCEEEEcCCCCcch-h-hhhhhCCC-CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283          128 GAKVLISSPTWGNH-K-NIFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK  204 (410)
Q Consensus       128 gd~Vl~~~p~y~~~-~-~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~  204 (410)
                      ||+|++.. .|+.. . ++++.+|. ++..+..  +.+..+|+++++.   +   +.+  .+++....||+..+.   ++
T Consensus        83 g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~---~---~~v--~~vhnETSTGv~npv---~~  148 (374)
T TIGR01365        83 GVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF---K---NDV--VFTWNGTTSGVRVPN---GD  148 (374)
T ss_pred             CCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC---C---CCE--EEecCCCchheeccc---cc
Confidence            89999875 55543 4 78888998 4777754  5666788888862   1   222  345667778996665   34


Q ss_pred             HHHHHHH-cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH-
Q 015283          205 IADVIQE-KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS-  282 (410)
Q Consensus       205 i~~~~~~-~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~-  282 (410)
                      ++   ++ ++.++|+|.+ +.++..+.+.+           .-++++.|.-|.+++|+ +++++++   +++.+++... 
T Consensus       149 i~---~~~~~~lliVDav-Ss~g~~~l~~d-----------~iDv~~tgsQK~L~~pp-Gls~v~v---s~~Al~~~~~~  209 (374)
T TIGR01365       149 FI---PADREGLTICDAT-SAAFAQDLDYH-----------KLDVVTFSWQKVLGGEG-AHGMLIL---SPRAVARLESY  209 (374)
T ss_pred             cc---cccCCCcEEEEcc-chhcCCCCChh-----------HCcEEEEechhccCCCC-ceEEEEE---CHHHHHHHhhc
Confidence            43   33 5899999999 77775432211           14566777788886653 1355544   7777666542 


Q ss_pred             --------HHH---------hhc-cCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          283 --------QLK---------RLA-RPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       283 --------~~~---------~~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                              .+.         ... ..+..+|+..+..++...|+.-     .++ .++...++.+++++.+++.++ ++|
T Consensus       210 ~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i-----~~egGle~~~~Rh~~~a~~l~~~l~-~lg  283 (374)
T TIGR01365       210 TPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWA-----ESIGGLKPLIARADDNLAVLEAFVA-KNN  283 (374)
T ss_pred             CCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHH-----HHccCHHHHHHHHHHHHHHHHHHHH-HCC
Confidence                    111         001 1222244444444444433210     011 367888999999999999999 998


Q ss_pred             CCCCcccccCCcce----eeec-C-C-----C-----HHHHHHhhhcCcEEEcCCC--------eEE-ecCCCcccHHHH
Q 015283          344 SGKDWSFILRQIGM----FSFT-G-L-----N-----KAQSDNMTNKWHVYMTKDG--------RIS-LAGLSLAKCEYL  398 (410)
Q Consensus       344 ~~~~~~~~~~~~~~----~~~~-~-~-----~-----~~~~~~ll~~~gi~v~~~g--------Ris-~~~~~~~~i~~~  398 (410)
                      ....+...+...+.    +... + +     +     .+.+.+.++++||.+.+|.        ||+ ++.++.++++.+
T Consensus       284 ~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l  363 (374)
T TIGR01365       284 WIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECL  363 (374)
T ss_pred             CcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHH
Confidence            31111110111111    2221 2 2     1     3456666667799998763        996 666899999999


Q ss_pred             HHHHHHHhhh
Q 015283          399 ADAIIDSYHN  408 (410)
Q Consensus       399 ~~~l~~~l~~  408 (410)
                      ++.|.-+.+.
T Consensus       364 ~~~l~~~~~~  373 (374)
T TIGR01365       364 CPWLDWAFAL  373 (374)
T ss_pred             HHHHHHHHhc
Confidence            9999877643

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.46  E-value=3e-11  Score=112.76  Aligned_cols=333  Identities=12%  Similarity=0.066  Sum_probs=193.9

Q ss_pred             eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      .|||-+-.     ++..+++...+++..    + +..|.....+.+|.+.+++.+..        +.+++  |..|+++.
T Consensus        43 ~IDLrSDT-----gT~apS~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~G~--------E~alp--thqGRgaE  102 (467)
T TIGR02617        43 FIDLLTDS-----GTGAVTQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIFGY--------QYTIP--THQGRGAE  102 (467)
T ss_pred             EEECccCC-----CCCCCCHHHHHHHHc----C-CcccccCchHHHHHHHHHHHhCC--------ceEEE--CCCCchHH
Confidence            46666322     332236777777765    2 36688888888999999999633        45666  88999988


Q ss_pred             HHHHHHHHHhC-CCCEEEEcCC--------CCcchhhhhhhCCCCccceeee--------cCCCcccChhhHHHHHhcCC
Q 015283          116 RLAAALIERYF-PGAKVLISSP--------TWGNHKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       116 ~~~~~~~~~~~-~gd~Vl~~~p--------~y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~~~l~~~i~~~~  178 (410)
                      .++..+  .+. +||.+++..+        .|..........|+.++.++..        ....+.+|++++++.+++.+
T Consensus       103 ~Il~~~--~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g  180 (467)
T TIGR02617       103 QIYIPV--LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVG  180 (467)
T ss_pred             HHHHHh--hcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcC
Confidence            887433  366 7887775443        1222233556778777665431        12346789999999998642


Q ss_pred             C-CcEEEEeCCCCCC-CCCCCCHHHHHHHHHHHHHcCCcccccccCCCC-CC--CCC--CCchhHhHHHhhc--CCcEEE
Q 015283          179 G-GSFILLHGCAHNP-TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF-AS--GSL--DNDASSVRLFATR--GMELLV  249 (410)
Q Consensus       179 ~-~~~~ii~~~p~NP-tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~-~~--~~~--~~~~~~~~~~~~~--~~~~i~  249 (410)
                      . +...+...-.+|. -|+++|.+.++++.++|++||+.++.|.+-..- .+  ...  .....++..+..+  ...+.+
T Consensus       181 ~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsv  260 (467)
T TIGR02617       181 PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADML  260 (467)
T ss_pred             CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEE
Confidence            1 2222221112344 478999999999999999999999999984221 11  000  0111233333211  224566


Q ss_pred             EecccccccccCCCcceEEEEeCCc---hhHHHHHHHHHhhc-cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSS---DLAARVKSQLKRLA-RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      ..|+||.++.|   +|.++ ..+++   ++.++++...-..- +.++.+.+.....+++.-|.+. ..   .+   ..+.
T Consensus       261 t~slsKglgAp---vGg~L-ag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~-~~---~~---yl~~  329 (467)
T TIGR02617       261 AMSAKKDAMVP---MGGLL-CFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG-MN---LD---WLAY  329 (467)
T ss_pred             EEEcCCCCCCc---ccceE-EecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhc-cc---HH---HHHH
Confidence            67999998755   56553 23444   33333333221111 2244455555555555444432 11   11   1222


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-------C------CHHHHHHhhhcCcEEEcCC----------
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------L------NKAQSDNMTNKWHVYMTKD----------  382 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-------~------~~~~~~~ll~~~gi~v~~~----------  382 (410)
                      ++ ...++|.+.|. +.|+    .+.. .+|.-+|++       +      ...++.+|..+.||-..--          
T Consensus       330 ri-~qv~yl~~~L~-~~Gv----pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~  402 (467)
T TIGR02617       330 RI-NQVQYLVNGLE-EIGV----VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPK  402 (467)
T ss_pred             HH-HHHHHHHHHHH-hCCC----cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCC
Confidence            22 24456777887 7874    3344 455545552       1      1345667777777754221          


Q ss_pred             -C----------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          383 -G----------RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       383 -g----------Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                       |          |++++.  .|.+.++.++++++.+.++
T Consensus       403 ~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~  441 (467)
T TIGR02617       403 TGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_pred             CCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence             1          888764  4889999999999988764

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.41  E-value=7.5e-11  Score=117.45  Aligned_cols=213  Identities=11%  Similarity=0.028  Sum_probs=126.3

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccc
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE  154 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~  154 (410)
                      +..-..+..+.+|+.+...       .-..+  ++|+|+++.++  +.+.+.+||.|++..-||-+....+...|+.+++
T Consensus       193 ~~G~i~eAe~~aA~~fgAd-------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVY  261 (713)
T PRK15399        193 HTGPHLEAEEYIARTFGAE-------QSYIV--TNGTSTSNKIV--GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIW  261 (713)
T ss_pred             CChHHHHHHHHHHHHhCCC-------cEEEE--eCChHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEE
Confidence            3333456666666664332       22333  68889998888  5667889999999999999988889999999998


Q ss_pred             eeeecCCCc----ccCh-----hhHHHHHhcCCCC--cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-cccccC
Q 015283          155 YRYYDPKTV----GLDF-----EGMIADIKAAPGG--SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP-FFDVAY  222 (410)
Q Consensus       155 v~~~~~~~~----~~d~-----~~l~~~i~~~~~~--~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l-i~Deay  222 (410)
                      ++.. .+.+    +++.     +.+++.+.++++.  ++.+++++| +-.|.+++.+.+.++   |   |+.+ ++||||
T Consensus       262 l~P~-~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~---~---g~~~ilvDEAh  333 (713)
T PRK15399        262 LKPT-RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQT---L---DVPSIHFDSAW  333 (713)
T ss_pred             eccc-ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHH---h---CCCEEEEeccc
Confidence            8532 1222    3444     8888888876432  133443333 445998776655444   5   5656 699998


Q ss_pred             CCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHH
Q 015283          223 QGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGAR  301 (410)
Q Consensus       223 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (410)
                      .+.. |.+.-++...+.........++++.|.+|.+  +|+.-+.++.+.+ .-..+++...+..+..+..+.+...+..
T Consensus       334 gah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~-~vd~~~~n~a~~m~~STSPsY~LmASLD  410 (713)
T PRK15399        334 VPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKG-EYDEETFNEAFMMHTSTSPSYPIVASVE  410 (713)
T ss_pred             hhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecC-CCCHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence            7643 3211111222210001223456699999996  5777777655433 2234567776664443222233333444


Q ss_pred             HHHHHhCC
Q 015283          302 IVANVVGN  309 (410)
Q Consensus       302 ~a~~~l~~  309 (410)
                      .+..++..
T Consensus       411 ~a~~~m~~  418 (713)
T PRK15399        411 TAAAMLRG  418 (713)
T ss_pred             HHHHHHHh
Confidence            45555553

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.41  E-value=1.1e-11  Score=123.28  Aligned_cols=213  Identities=12%  Similarity=0.062  Sum_probs=127.5

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccc
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE  154 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~  154 (410)
                      |..-..+..+.+|+.+...      .. ..+  ++|+|+++.++  +.+.+.+||.|++..-||-+....+...|+.+++
T Consensus       193 ~~G~i~eAe~~AA~~fgAd------~t-yfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVY  261 (714)
T PRK15400        193 HSGPHKEAEEYIARVFNAD------RS-YMV--TNGTSTANKIV--GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIY  261 (714)
T ss_pred             CChHHHHHHHHHHHHhCCC------cE-EEE--eCchHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence            3333456666666664322      12 333  68888998887  5666889999999999999988889999999998


Q ss_pred             eeeecCCCc----ccC-----hhhHHHHHhcCCCCc---EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC
Q 015283          155 YRYYDPKTV----GLD-----FEGMIADIKAAPGGS---FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY  222 (410)
Q Consensus       155 v~~~~~~~~----~~d-----~~~l~~~i~~~~~~~---~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay  222 (410)
                      ++.. .+.+    .++     .+.+++.+.++++..   .+++ .+| +-.|.+++.+   .|++.|+.++  |++||||
T Consensus       262 l~P~-rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vi-t~p-TYdG~~yd~~---~I~~~~~~~~--ilvDEAw  333 (714)
T PRK15400        262 FRPT-RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVI-TNS-TYDGLLYNTD---FIKKTLDVKS--IHFDSAW  333 (714)
T ss_pred             eccc-ccccCCccCCCccccCHHHHHHHHHhCccccCccEEEE-ECC-CCccEecCHH---HHHHHhCCCC--EEEEccc
Confidence            8542 1222    334     788998888764322   3444 333 4459977654   5566677776  6899998


Q ss_pred             CCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHH
Q 015283          223 QGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGAR  301 (410)
Q Consensus       223 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (410)
                      .+.. |.+.-++..++.......+.++++.|.+|.+  +|+.-+.++.+.+ .-..+++...+..+..+..+.+...+..
T Consensus       334 gah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg-~vd~~~~n~a~~m~~STSPsY~l~ASLD  410 (714)
T PRK15400        334 VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKG-DVNEETFNEAYMMHTTTSPHYGIVASTE  410 (714)
T ss_pred             hhhhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcC-CCCHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence            7653 3211111222211111224569999999997  4666555543322 2223566666664443222233333444


Q ss_pred             HHHHHhCC
Q 015283          302 IVANVVGN  309 (410)
Q Consensus       302 ~a~~~l~~  309 (410)
                      ++..++..
T Consensus       411 ~a~~~m~~  418 (714)
T PRK15400        411 TAAAMMKG  418 (714)
T ss_pred             HHHHHHHh
Confidence            45566653

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.38  E-value=5.2e-11  Score=118.71  Aligned_cols=213  Identities=14%  Similarity=0.059  Sum_probs=124.8

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCCCcc
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS  153 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~  153 (410)
                      +..-..+..+.+|+.|...      .. ..+  ++|+|.++.++  +.+.+.+||.|++..-||-+.... +...|+.++
T Consensus       172 ~eG~i~eAq~~AA~~fgAd------~t-yFl--vNGTS~gn~a~--i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PV  240 (720)
T PRK13578        172 HEGAAKDAQKHAAKVFNAD------KT-YFV--LNGTSASNKVV--TNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV  240 (720)
T ss_pred             CChHHHHHHHHHHHHhCCC------ce-EEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEE
Confidence            3333456666666664332      22 333  68889999888  666788999999999999988774 888999998


Q ss_pred             ceeeecCCCc----ccCh-----hhHHHHHhcCCCC-------cEEEEeCCCCCCC--CCCCCHHHHHHHHHH-HHHcCC
Q 015283          154 EYRYYDPKTV----GLDF-----EGMIADIKAAPGG-------SFILLHGCAHNPT--GIDPTPEQWEKIADV-IQEKNH  214 (410)
Q Consensus       154 ~v~~~~~~~~----~~d~-----~~l~~~i~~~~~~-------~~~ii~~~p~NPt--G~~~~~~~l~~i~~~-~~~~~~  214 (410)
                      +++..- +.+    +++.     +.+++.+.++++.       .+++++   .|||  |.+++.   ++|+++ |+.++ 
T Consensus       241 Yl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvi---t~pTYdG~~ydi---~~I~~~~~h~~~-  312 (720)
T PRK13578        241 YLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVI---QLGTYDGTIYNA---RQVVDKIGHLCD-  312 (720)
T ss_pred             Eeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEE---ECCCCcceeecH---HHHHHHhhccCC-
Confidence            885421 222    3454     4488888765211       244443   2555  997665   556565 67777 


Q ss_pred             cccccccCCCCC-CCCCCCchhHhH-HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh--------HHHHHHHH
Q 015283          215 IPFFDVAYQGFA-SGSLDNDASSVR-LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL--------AARVKSQL  284 (410)
Q Consensus       215 ~li~Deay~~~~-~~~~~~~~~~~~-~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~--------~~~~~~~~  284 (410)
                      .|++||||.+.. |.+.-.+.+... .+....+.++++.|.+|.+  +++.-+.++.+ ++..+        .+++...+
T Consensus       313 ~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHv-k~~~i~g~~~~v~~~r~~~al  389 (720)
T PRK13578        313 YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHK-KDNHIKGQARYCPHKRLNNAF  389 (720)
T ss_pred             cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhc-CCcccccccccCCHHHHHHHH
Confidence            999999986643 321100111111 1112234579999999997  46666665432 33221        25677766


Q ss_pred             HhhccCcccCCChhHHHHHHHHhCC
Q 015283          285 KRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                      ..+..+..+.+...+..++..++..
T Consensus       390 ~m~qSTSPsY~LmASLDva~~~m~~  414 (720)
T PRK13578        390 MLHASTSPFYPLFAALDVNAKMHEG  414 (720)
T ss_pred             HHHcCCChHHHHHHHHHHHHHHHHH
Confidence            6444322222223333444455543

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.38  E-value=3.9e-10  Score=115.29  Aligned_cols=220  Identities=14%  Similarity=0.114  Sum_probs=118.7

Q ss_pred             hhHHHHHhc-----CCCCcEEEEeCC-CCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          168 EGMIADIKA-----APGGSFILLHGC-AHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       168 ~~l~~~i~~-----~~~~~~~ii~~~-p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                      +.+++.+.+     .+++...+++.. .+.-.|+.++ ..-++.+.++|++||+++|.||++.+|+-.   ...+.... 
T Consensus       567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRt---G~~fa~e~-  642 (817)
T PLN02974        567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRL---GVESAWEL-  642 (817)
T ss_pred             HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcc---cchhhHHh-
Confidence            445565542     123455555444 2677788765 555999999999999999999999999732   23333322 


Q ss_pred             hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH--h-hccCccc-CCChhHHHHH-HHHhCChhhHH
Q 015283          241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK--R-LARPMYS-NPPVHGARIV-ANVVGNPALFD  314 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~  314 (410)
                      .+..++++   .++|.++ .| +.+|.+++   ++++.+.+...-.  . ....++. +|...+...+ ...++++++..
T Consensus       643 ~gv~PDIi---~~gKgLt-gG~~Plaa~l~---~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~  715 (817)
T PLN02974        643 LGCKPDIA---CYAKLLT-GGLVPLAATLA---TEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNP  715 (817)
T ss_pred             cCCCCCEE---eeccccc-CCCCccEEEEE---cHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHH
Confidence            23334555   5899998 78 58899755   7786666532100  0 1222332 3433332222 44555544432


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcC
Q 015283          315 EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTK  381 (410)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~  381 (410)
                      .+.+...+..+.+.   +.+.+.++ +.+.   +.-+ ..-|.+.-+.+             ...+...++.++||++++
T Consensus       716 ~l~~~~~~l~~~l~---~~l~~~l~-~~p~---V~~V-Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~  787 (817)
T PLN02974        716 NLIPPGSRLRELWD---EELVRAIS-SLPN---VERV-VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARP  787 (817)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHh-hCCC---eeEE-EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEe
Confidence            22222222222221   12222233 3321   1112 22233222211             112345555257999999


Q ss_pred             CC---eEEec-CCCcccHHHHHHHHHHHh
Q 015283          382 DG---RISLA-GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       382 ~g---Ris~~-~~~~~~i~~~~~~l~~~l  406 (410)
                      .|   |+..+ ..+++++++++++|.+.|
T Consensus       788 ~Gnvi~l~pP~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        788 LGNVVYLMCGPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             cCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            76   54322 348999999999998876

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.37  E-value=1.2e-10  Score=119.01  Aligned_cols=299  Identities=11%  Similarity=0.083  Sum_probs=178.7

Q ss_pred             ccCcCC---cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC--C----CCEEEEcCCCCcch
Q 015283           71 KEYLPI---EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--P----GAKVLISSPTWGNH  141 (410)
Q Consensus        71 ~~y~~~---~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~--~----gd~Vl~~~p~y~~~  141 (410)
                      +.|.|.   +|..++...+.+|+.+..|.+    +..+ +.++|+.+........+.+.  .    .+.|+++...++..
T Consensus       517 hPyqPe~~sqG~lq~i~elq~~l~eltGmd----~~Sl-~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn  591 (939)
T TIGR00461       517 HPFQPSNQVEGYQELIAQLEKWLCSITGFD----AISL-QPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN  591 (939)
T ss_pred             CCCCchHHhHHHHHHHHHHHHHHHHHHCCC----Cccc-CCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC
Confidence            566654   466666666777766655543    3322 24566665553322333321  2    25788999999877


Q ss_pred             hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccc
Q 015283          142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDV  220 (410)
Q Consensus       142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~De  220 (410)
                      ...+...|.+++.++.  ..++.+|+++|++++++++++++++++++|+| +|.+   ++ +++|+++|+++|.++++|.
T Consensus       592 Pasa~~~G~~Vv~V~~--d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDg  665 (939)
T TIGR00461       592 PASAAMAGMQVVPVNC--DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDG  665 (939)
T ss_pred             HHHHHHCCCEEEEecc--CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEe
Confidence            7888889999999987  35678999999999986555788888899999 7884   34 8899999999999999999


Q ss_pred             cCCC-CCCCCCCCchhHhHHHhhcCCcEEEEeccccccc----ccCCCcceEEEEeCCchhHHHHHHHH----------H
Q 015283          221 AYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAMNVVCSSSDLAARVKSQL----------K  285 (410)
Q Consensus       221 ay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~l~~~~~~~~~~~~~~~~~----------~  285 (410)
                      ++.. ...  .. .       ....+.+++++|.+|.|+    ..|-.+|.+.+   .+++...+-...          .
T Consensus       666 Aq~~al~~--l~-~-------Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~v---r~~L~~~lPg~~v~~t~d~~gre  732 (939)
T TIGR00461       666 ANMNAQVG--LT-S-------PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KSHLIPFLPKHDVVSMITGIGGS  732 (939)
T ss_pred             cChhhCCC--CC-C-------ccccCCCEEEecCCccCCCCCCCCCCCeEEEEE---hhhchhhcCCCcccccccCCCCc
Confidence            9643 221  10 0       123357888899999764    34555688754   444222211000          0


Q ss_pred             hhccCccc---CCChhHHHHHH--HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcce---
Q 015283          286 RLARPMYS---NPPVHGARIVA--NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM---  357 (410)
Q Consensus       286 ~~~~~~~~---~~~~~~~~~a~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~---  357 (410)
                      ..++....   +...+...+..  ..|.        .+.+++..+..-.+..++.+.|+ + +.+  + ..+...+.   
T Consensus       733 q~Iga~s~~~~g~a~~~l~a~~yi~~lG--------~~GL~~~a~~ailnAnYl~~rL~-~-~~~--~-l~~~~~~~~~h  799 (939)
T TIGR00461       733 KSIGSVSAAPYGSASILPISWMYIKMMG--------NEGLPKASVVAILNANYMATRLK-D-HYP--I-LFVGTLKHVAH  799 (939)
T ss_pred             cccccccccccCcHHHHHHHHHHHHHHC--------HHHHHHHHHHHHHHHHHHHHHhh-c-cCc--c-cccCCCCceeE
Confidence            00011111   11111111111  1222        23456777777778899999887 5 311  1 12111122   


Q ss_pred             -eee--c------CCC-HHHHHHhhhcCcEEEc----CC-C----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          358 -FSF--T------GLN-KAQSDNMTNKWHVYMT----KD-G----RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       358 -~~~--~------~~~-~~~~~~ll~~~gi~v~----~~-g----Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                       |++  .      +.. .+..++|++ +|+...    |. |    |.+-.. ++++||++++.+.++-++
T Consensus       800 Efv~~~~~~~~~~g~~~~dIakrL~d-~G~hapt~~~pv~g~lmiepTE~e-skeelD~f~~al~~I~~e  867 (939)
T TIGR00461       800 ECILDLRPLKAKTGIEAIDVAKRLQD-YGFHAPTLSFPVPGTLMVEPTESE-SLEELDRFCDAMIAIKEE  867 (939)
T ss_pred             EEEEeccchhhhcCCCHHHHHHHHHh-CCeeccccCCccCCeEEEEeeccC-CHHHHHHHHHHHHHHHHH
Confidence             111  1      123 445777776 588641    21 2    444434 889999999999877554

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.36  E-value=1.6e-11  Score=114.92  Aligned_cols=222  Identities=16%  Similarity=0.117  Sum_probs=125.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc--CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.--...|+.  +|.+.+++.+++.......  .....-..++.+.+.+....      ..+++.+  +++|
T Consensus        16 ~~~lD~~~~~~~~~lGh~--~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~------~~~~v~f--~~sG   85 (339)
T PF00202_consen   16 REYLDFMSGYGSVNLGHN--HPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPG------GLDRVFF--ANSG   85 (339)
T ss_dssp             EEEEESSHHHHTTTT-BT---HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSST------TEEEEEE--ESSH
T ss_pred             CEEEECCCCccceecCCC--ccccchhHHHHhhhcccccccceeccchhhhhhhhhhcccc------ccceeee--ccCc
Confidence            468899877542344554  5888888888775422111  11111223455555555311      1468888  9999


Q ss_pred             hhHHHHHHHHHH------HhCCCCEEEEcCCCCcchhh-hhhhC---------CC---CccceeeecCCC---cccChhh
Q 015283          112 TGSLRLAAALIE------RYFPGAKVLISSPTWGNHKN-IFNDA---------RV---PWSEYRYYDPKT---VGLDFEG  169 (410)
Q Consensus       112 t~a~~~~~~~~~------~~~~gd~Vl~~~p~y~~~~~-~~~~~---------g~---~~~~v~~~~~~~---~~~d~~~  169 (410)
                      ++|++.+.++..      ....-.+|+....+|.+... .+...         +.   .+..+|..+...   ..-..+.
T Consensus        86 seAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  165 (339)
T PF00202_consen   86 SEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNA  165 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHH
Confidence            999999988876      33344789998888865432 11111         11   122233311000   0000111


Q ss_pred             HHHHHhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          170 MIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       170 l~~~i~~-~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +++.+.+ ..+...++++...+...|... +.+-+++|.++|++||+++|.||++.+++-.   ...+.... .+..+++
T Consensus       166 ~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRt---G~~~a~~~-~gv~PDi  241 (339)
T PF00202_consen  166 LEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRT---GKFFASEH-YGVDPDI  241 (339)
T ss_dssp             HHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTT---SSSSGHHH-HTSSSSE
T ss_pred             HHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceeccccccccccc---CCccceec-ccccCcc
Confidence            2222221 123455566555555567665 4555999999999999999999999998632   22333333 3333455


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchh
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDL  276 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~  276 (410)
                      +   +++|.++ .|+.+|.+++   ++++
T Consensus       242 v---~~gK~l~-gG~p~sav~~---~~~i  263 (339)
T PF00202_consen  242 V---TFGKGLG-GGLPISAVLG---SEEI  263 (339)
T ss_dssp             E---EEEGGGG-TTSSEEEEEE---EHHH
T ss_pred             c---ccccchh-hhhhcccccc---cchh
Confidence            5   4579998 6799999755   6663

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.36  E-value=1.1e-10  Score=118.66  Aligned_cols=301  Identities=14%  Similarity=0.077  Sum_probs=176.9

Q ss_pred             ccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--CCC----CEEEEcCCCCcch
Q 015283           71 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG----AKVLISSPTWGNH  141 (410)
Q Consensus        71 ~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~~g----d~Vl~~~p~y~~~  141 (410)
                      +.|.|   .+|..++...+.+++.+..|.    +.+.+ +-.+|+.+.......++.+  .+|    ++|+++.-.|+..
T Consensus       530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~Sl-~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtN  604 (954)
T PRK12566        530 HPFAPREQAEGYRAMIDELEAWLCAITGF----DAICM-QPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTN  604 (954)
T ss_pred             CCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeEee-cCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccC
Confidence            66777   678777666666666555553    22333 2345565554443344432  133    5788888888666


Q ss_pred             hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283          142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA  221 (410)
Q Consensus       142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea  221 (410)
                      ...+...|.+++.++..  +++.+|+++|++++++.+++++++++.+|++-++.   ..++++|+++|+++|+++++|.+
T Consensus       605 pasa~~~GieVv~Vp~D--~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv~vDgA  679 (954)
T PRK12566        605 PASAQMAGMRVVIVECD--PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQVYMDGA  679 (954)
T ss_pred             HHHHHHCCCEEEEeccC--CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEEEEEee
Confidence            66677889999999983  45689999999999855567777777776655544   56799999999999999999999


Q ss_pred             CCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc----CCCcceEEEEeCCchhHHHHHHHHHhhc---------
Q 015283          222 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY----AERIGAMNVVCSSSDLAARVKSQLKRLA---------  288 (410)
Q Consensus       222 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~l~~~~~~~~~~~~~~~~~~~~~---------  288 (410)
                      +. .+....  +.      ....+.++++++..|.|+.|    |..+|.+.+   .+.    +...+...-         
T Consensus       680 ~~-~a~~~l--~~------Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav---~~~----L~pfLp~~P~~d~~G~~~  743 (954)
T PRK12566        680 NL-NAQVGL--AR------PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGV---RAH----LAPFVANHPVVPVEGPDP  743 (954)
T ss_pred             Ch-hhccCC--CC------hhhcCCCEEEecCCcccCcCccCCCCccchhhh---hhh----hhhhccCCCCcCCCCCCC
Confidence            53 221111  10      12345788999999988532    333344311   222    333333110         


Q ss_pred             -cCcccCCChhH---HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee-----e
Q 015283          289 -RPMYSNPPVHG---ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-----S  359 (410)
Q Consensus       289 -~~~~~~~~~~~---~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-----~  359 (410)
                       ....++.+..+   ..++...+..-.     .+ +.+.......+..++.+.|. + +..  ..+.++...+|     .
T Consensus       744 r~ga~S~~~~gsa~~l~~A~~Yi~~lG-----~e-Lk~aa~~ailnAnYla~rL~-~-~~~--v~~~~~~~~~~hEfii~  813 (954)
T PRK12566        744 NNGAVSAAPWGSASILPISWMYIAMMG-----PQ-LADASEVAILSANYLANQLG-G-AFP--VLYRGRNERVAHECILD  813 (954)
T ss_pred             CCCceeecccchHHHHHHHHHHHHHHC-----HH-HHHHHHHHHHHHHHHHHHhH-h-hCC--CCcCCCCCCeeeEEEEE
Confidence             01122222222   122222222111     12 45666666778888888887 5 221  22321111111     1


Q ss_pred             ecC------CC-HHHHHHhhhcCcEEEc----CCC---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          360 FTG------LN-KAQSDNMTNKWHVYMT----KDG---RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       360 ~~~------~~-~~~~~~ll~~~gi~v~----~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      +..      .+ .++.++|+ ++||...    |..   |++..- .+++++|++++.|+++.++
T Consensus       814 ~~~l~~~~g~~~~dvakRL~-d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e  876 (954)
T PRK12566        814 LRPLKAQTGISEEDVAKRLM-DYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE  876 (954)
T ss_pred             ccccccccCCCHHHHHHHHH-HCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence            111      23 34567777 4677642    332   887543 3889999999999988765

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.35  E-value=2.5e-10  Score=111.78  Aligned_cols=249  Identities=11%  Similarity=0.078  Sum_probs=150.4

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCC-c---------c-cCCceEEEecCChhhHHHHHHHHHHHhC-------------
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNS-V---------L-KEQRVATVQGLSGTGSLRLAAALIERYF-------------  126 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~-~---------~-~~~~i~~~~t~ggt~a~~~~~~~~~~~~-------------  126 (410)
                      ..+.......++.+.+.+|+.+..+. +         . ....-.+  |+|||.|+..+....+...             
T Consensus       119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~--tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~  196 (522)
T TIGR03799       119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAF--CSGGTVANITALWVARNRLLKADGDFKGVARE  196 (522)
T ss_pred             ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEE--cCchHHHHHHHHHHHHHHhccccccccccccc
Confidence            34444455668888888887544321 0         0 1122455  8999999988754444321             


Q ss_pred             -----------CCCEEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCC
Q 015283          127 -----------PGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCA  189 (410)
Q Consensus       127 -----------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p  189 (410)
                                 ++..|++++-.|.+....+...|.   +++.+|+  ++++.+|++.|++.+++   .+.+.++++.+..
T Consensus       197 gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~--d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataG  274 (522)
T TIGR03799       197 GLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT--DANNRIDVDALRDKCAELAEQNIKPLAIVGVAG  274 (522)
T ss_pred             cchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe--CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence                       134688888889888888888887   6888888  45678999999998863   2223444554455


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      ++.||.   .+++++|+++|+++|+++++|.+|.+....   .+  ..+..... ...+.+..|.+|.++.| ..+|.++
T Consensus       275 tt~tGa---iDpl~eIa~i~~~~g~~lHVDaA~gg~~~~---~~--~~r~~l~gle~aDSit~d~HK~l~~P-~g~G~ll  345 (522)
T TIGR03799       275 TTETGN---IDPLDEMADIAQELGCHFHVDAAWGGATLL---SN--TYRHLLKGIERADSVTIDAHKQLYVP-MGAGMVL  345 (522)
T ss_pred             CcCCCC---cCCHHHHHHHHHHcCCeEEEEchhhhHHHh---CH--HHHHHhcCchhCCEEEEChhhcCCcC-cccEEEE
Confidence            778999   566778888899999999999998754421   01  11222221 23567788999965433 4468873


Q ss_pred             EEeCCchhHHHHHH---HHHhh-cc-----CcccCCChhH--HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVKS---QLKRL-AR-----PMYSNPPVHG--ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       269 ~~~~~~~~~~~~~~---~~~~~-~~-----~~~~~~~~~~--~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                        .++++..+.+..   ++... ..     ....+.+..+  ..++...+.        .+.++++.++..++++++.+.
T Consensus       346 --vr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG--------~~G~~~ii~~~~~la~~l~~~  415 (522)
T TIGR03799       346 --FKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIG--------RKGYELLIDQSIEKAKYFADL  415 (522)
T ss_pred             --EeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHH
Confidence              445554333322   11000 00     0001111111  112222222        234578888888899999998


Q ss_pred             hhhccC
Q 015283          338 LSAKDK  343 (410)
Q Consensus       338 l~~~~g  343 (410)
                      |. +.+
T Consensus       416 L~-~~~  420 (522)
T TIGR03799       416 IQ-QQP  420 (522)
T ss_pred             Hh-hCC
Confidence            87 653

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.35  E-value=1e-10  Score=121.44  Aligned_cols=302  Identities=12%  Similarity=0.089  Sum_probs=173.4

Q ss_pred             ccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--CCCC----EEEEcCCCCcch
Q 015283           71 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPGA----KVLISSPTWGNH  141 (410)
Q Consensus        71 ~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~~gd----~Vl~~~p~y~~~  141 (410)
                      +.|.|   .+|..++...+.+++....|.    +++.+. .++|+++........+.+  .+||    .|++++..|+..
T Consensus       529 hP~qp~e~~qG~l~~i~e~q~~l~eltG~----d~~sl~-~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~sn  603 (954)
T PRK05367        529 HPFAPAEQAAGYRELIDQLEAWLAEITGY----DAVSLQ-PNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTN  603 (954)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHHCC----CCEEEC-ccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhh
Confidence            44554   245666767777776665553    356551 345555554432233332  4665    599999999888


Q ss_pred             hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283          142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA  221 (410)
Q Consensus       142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea  221 (410)
                      ...+...|.+++.+++.  .++.+|+++|++.+.+.+.+..++++.+|++-.+.   ..++++|+++|+++|+++++|.+
T Consensus       604 p~sa~~~G~~vv~v~~d--~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~---e~~I~eI~~i~h~~G~~v~VDgA  678 (954)
T PRK05367        604 PASAVMAGMKVVVVACD--ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVF---EETIREICEIVHEHGGQVYLDGA  678 (954)
T ss_pred             HHHHHHCCCEEEEECCC--CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeee---cCCHHHHHHHHHHcCCEEEEECc
Confidence            88888999999999873  45689999999999764345666676666654333   34588899999999999999999


Q ss_pred             CCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc----ccCCCcceEEEEeCCchhHHHHHHHHHhhc-----cCc-
Q 015283          222 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAMNVVCSSSDLAARVKSQLKRLA-----RPM-  291 (410)
Q Consensus       222 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~-----~~~-  291 (410)
                      +..-... ..  .      ....+.++++.|.+|.|+    ..|-.+|.+.+   .+.    +...+....     +.. 
T Consensus       679 ~~~al~~-l~--~------pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~v---r~~----l~p~lpg~~v~~~~~~~~  742 (954)
T PRK05367        679 NMNAQVG-LA--R------PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGV---KAH----LAPFLPGHPVQIAGGETG  742 (954)
T ss_pred             ChhhccC-CC--C------hhhcCCCEEEecCcccCCCCcCCCCCceEEEee---ccc----ccccCCCCccCcCCCCCC
Confidence            7422111 11  0      012235678889999874    23444677744   333    332222111     000 


Q ss_pred             cc--CCChhHHH-H---HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-----Ccceeee
Q 015283          292 YS--NPPVHGAR-I---VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-----QIGMFSF  360 (410)
Q Consensus       292 ~~--~~~~~~~~-~---a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-----~~~~~~~  360 (410)
                      .+  ..+..++. +   +...+..-.     .+.+++..++...+.+++.+.|+ +. .+  +.+..+     ....+-+
T Consensus       743 ~g~v~ta~~g~al~~~~a~~yi~~~G-----~~Glr~~a~~~~~~A~Yl~~~L~-~~-~~--~~~~~~~~~~~~e~i~~~  813 (954)
T PRK05367        743 IGAVSAAPFGSASILPISWMYIRMMG-----AEGLRQATEVAILNANYIAKRLK-DH-YP--VLYTGANGRVAHECILDL  813 (954)
T ss_pred             cCcchhHHHHHHHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHH-hh-cC--ccccCCCCCcccceEEEe
Confidence            01  11111111 1   111111101     23445666666678888888887 43 10  112111     1222223


Q ss_pred             c------CCC-HHHHHHhhhcCcEEEcC-----CC--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          361 T------GLN-KAQSDNMTNKWHVYMTK-----DG--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       361 ~------~~~-~~~~~~ll~~~gi~v~~-----~g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      .      +.+ .+..++|++ +|+....     .+  ||+..- .+++++|++++.|+++..+
T Consensus       814 ~~~~~~~g~~~~di~krL~d-~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e  875 (954)
T PRK05367        814 RPLKESTGITVDDIAKRLID-YGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE  875 (954)
T ss_pred             ecccccCCCCHHHHHHHHHH-CCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence            2      123 345666654 6886532     23  665442 3889999999999888654

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=99.33  E-value=4.3e-11  Score=103.75  Aligned_cols=319  Identities=14%  Similarity=0.160  Sum_probs=176.6

Q ss_pred             cHHHHHHHHHhhcc-CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEE
Q 015283           54 LDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL  132 (410)
Q Consensus        54 ~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl  132 (410)
                      +|+|.++....+.. ....+|.. ...-+..+.+...+.+       -+-.+|  +++|++|++++.++.+.+..-..|+
T Consensus        63 hp~VV~A~~kQmat~~tN~RFlh-d~lv~cA~~l~stlPe-------Lsvc~F--~NSGSEANDLALRLAR~ftkhqDvI  132 (452)
T KOG1403|consen   63 HPEVVRAGAKQMATISTNNRFLH-DELVQCARTLTSTLPE-------LSVCFF--VNSGSEANDLALRLARNFTKHQDVI  132 (452)
T ss_pred             CHHHHHHHHHHHhHhcccchhhH-HHHHHHHHHHhhcCCC-------ceEEEE--ecCCchhhHHHHHHHHhhcccCceE
Confidence            46666665554422 22244532 2222333333333322       134667  8999999999999999888666777


Q ss_pred             EcCCCCcchhh-hhhh------CCC---Cccce---eeecC-------------CCcccChhhHHHHHhc---CCCCcEE
Q 015283          133 ISSPTWGNHKN-IFND------ARV---PWSEY---RYYDP-------------KTVGLDFEGMIADIKA---APGGSFI  183 (410)
Q Consensus       133 ~~~p~y~~~~~-~~~~------~g~---~~~~v---~~~~~-------------~~~~~d~~~l~~~i~~---~~~~~~~  183 (410)
                      +.+-.|.++.. ..+.      .|.   ++.++   |+.+-             +....--+.+++.+.+   .+.....
T Consensus       133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA  212 (452)
T KOG1403|consen  133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA  212 (452)
T ss_pred             EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence            77777755532 2221      111   22222   22110             0000111223333322   1233444


Q ss_pred             EEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          184 LLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      ++-.+-+.=.|+++|++. .+++++..+..|-..|.||+.-+|+-  .....|.+..+. ..++++   ++.|.+| .|.
T Consensus       213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGR--vG~hyWafq~y~-fiPDIV---tmgKpmG-NGh  285 (452)
T KOG1403|consen  213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGR--VGSHYWAFQTYN-FIPDIV---TMGKPMG-NGH  285 (452)
T ss_pred             HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccc--cchhhhhhhhhc-cccchh---eecccCC-CCC
Confidence            554455666789988888 99999999999999999999988874  234556553321 222333   7899999 899


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA  340 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  340 (410)
                      .++.++.   .+++.+.+...-..+. +++. +|.+.+...+ ...++++.+    +       +..++....|...|+ 
T Consensus       286 PVa~Vat---tkeIA~Af~atgv~YF-NTyGGnPVsCAv~laVm~v~e~E~L----q-------~ha~~vG~~L~~lL~-  349 (452)
T KOG1403|consen  286 PVAAVAT---TKEIAQAFHATGVEYF-NTYGGNPVSCAVGLAVMRVCEDENL----Q-------EHAQQVGEKLEVLLR-  349 (452)
T ss_pred             eeeEEec---cHHHHHHhccccceeh-hccCCCchhHHHHHHHHHHHhhhhH----H-------HHHHHHHHHHHHHHH-
Confidence            9999643   7786666655322222 2333 5555554444 556666544    2       222222233333332 


Q ss_pred             ccCCCCCccccc--CCcceeeecCC---------CHH----HHHHhhhcCcEEEcCCC------eE--EecCCCcccHHH
Q 015283          341 KDKSGKDWSFIL--RQIGMFSFTGL---------NKA----QSDNMTNKWHVYMTKDG------RI--SLAGLSLAKCEY  397 (410)
Q Consensus       341 ~~g~~~~~~~~~--~~~~~~~~~~~---------~~~----~~~~ll~~~gi~v~~~g------Ri--s~~~~~~~~i~~  397 (410)
                      ++....  +++.  ...|.|+-+++         +.+    .+.++-+.++|.+...|      .|  .++. ++++.++
T Consensus       350 ~~k~kh--~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCF-neena~e  426 (452)
T KOG1403|consen  350 RLKQKH--ECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCF-NEENADE  426 (452)
T ss_pred             HHhhhc--cceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCccc-ChhhHHH
Confidence            222111  2222  34455554433         112    24566667889998776      22  2333 8899999


Q ss_pred             HHHHHHHHhhh
Q 015283          398 LADAIIDSYHN  408 (410)
Q Consensus       398 ~~~~l~~~l~~  408 (410)
                      .+..|.++|.-
T Consensus       427 ~v~~ld~iLT~  437 (452)
T KOG1403|consen  427 FVLGLDEILTV  437 (452)
T ss_pred             HHHHHHHHHHH
Confidence            99999998753

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.31  E-value=3.1e-10  Score=99.78  Aligned_cols=309  Identities=13%  Similarity=0.109  Sum_probs=179.8

Q ss_pred             cHHHHHHHHHhhcc-C--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC----
Q 015283           54 LDVVKKAENLMLER-G--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF----  126 (410)
Q Consensus        54 ~~~v~~a~~~~~~~-~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~----  126 (410)
                      +|.+.+++.+..+. .  ....|-..  ..++.+-+.+++.        -+.++.  ++.|.+|.+.+.++.+.+.    
T Consensus        77 hpki~~aLqeq~~kLtlssrafYnd~--~~~f~~~vt~lf~--------~~kvlp--mnTGaEa~Eta~KLaR~wgy~~K  144 (427)
T KOG1402|consen   77 HPKIIKALQEQADKLTLSSRAFYNDV--LGEFAEYVTKLFG--------YDKVLP--MNTGAEAVETACKLARKWGYRKK  144 (427)
T ss_pred             CHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHHHHHHhcC--------cceeee--cccchhHHHHHHHHHHHHHHhhc
Confidence            57888887776543 1  11334322  2366666666642        245666  6778999999988887552    


Q ss_pred             --C-CCEEEEc-CCCCcc-hhhh---------hhhCCCC----ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283          127 --P-GAKVLIS-SPTWGN-HKNI---------FNDARVP----WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC  188 (410)
Q Consensus       127 --~-gd~Vl~~-~p~y~~-~~~~---------~~~~g~~----~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~  188 (410)
                        | ...+++. .-+|.+ ...+         ...+|.-    +..+|+       -|.+.|+..+++  ++.+.+++-.
T Consensus       145 ~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l~~--~~vaaFivEP  215 (427)
T KOG1402|consen  145 NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEALEVALKS--PNVAAFIVEP  215 (427)
T ss_pred             cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHHHHHhcC--CCeeEEEeec
Confidence              3 2333333 233322 2111         1122211    223333       278899998887  5677777777


Q ss_pred             CCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283          189 AHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM  267 (410)
Q Consensus       189 p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l  267 (410)
                      .+...|++.|+.. +++..++|.+|++++|.||++.+++-.   ...+...+ -.-.++++.   +.|+++-.=..++.+
T Consensus       216 IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RT---Gk~la~d~-env~PDivi---lgKalSGG~~Pvsav  288 (427)
T KOG1402|consen  216 IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLART---GKLLACDY-ENVRPDIVI---LGKALSGGVYPVSAV  288 (427)
T ss_pred             cccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhccccc---CcEEEeeh-hhcCCCeEE---EeccccCCeeeeEEE
Confidence            7999998887666 999999999999999999999888843   23332211 111224443   578886222445553


Q ss_pred             EEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-
Q 015283          268 NVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK-  346 (410)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-  346 (410)
                         .++++    +...+.......+.+...++.+++...|+   .+.     -+...++.+.....+++.|. ++..+. 
T Consensus       289 ---l~~~~----im~~~~pgeHgsTyggNpLg~~vaiAale---vi~-----eekL~era~~lG~~l~~~L~-~l~~~~p  352 (427)
T KOG1402|consen  289 ---LADDD----IMLNIKPGEHGSTYGGNPLGCAVAIAALE---VIV-----EEKLVERAAKLGEILRDQLN-KLQKKFP  352 (427)
T ss_pred             ---EecHH----HHhccCCCccccccCCChHHHHHHHHHHH---HHH-----HHHHHHHHHHHHHHHHHHHH-hcccccc
Confidence               33666    44334433333233344444444433332   111     03555677778888888887 776321 


Q ss_pred             CcccccCCcceeeecCC---------CHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          347 DWSFILRQIGMFSFTGL---------NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       347 ~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      .+.......|++.-+-+         .++.+..+ ++.|+..-|-+    ||+.+- ++++|+++.++.|.+++.
T Consensus       353 ~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~  426 (427)
T KOG1402|consen  353 HVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA  426 (427)
T ss_pred             chhheeeccceEEEEEeccccccchhHHHHHHcc-cccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence            01122344566533321         12334444 45799888764    887543 599999999999998874

>PLN02452 phosphoserine transaminase

Probab=99.30  E-value=1.3e-09  Score=102.28  Aligned_cols=319  Identities=14%  Similarity=0.080  Sum_probs=177.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhh-ccC-------CCccCcC--CcccHHHHHHHHHHhcCCCCCcccCC-ce
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERG-------ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQ-RV  103 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-~~~-------~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~-~i  103 (410)
                      .+++|+.|       +..+|+.|++++.+.+ +..       ...+..+  ..-+.+.++.+.+.+.    .+  .+ .+
T Consensus         7 ~~~~f~pG-------P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~----~p--~~y~v   73 (365)
T PLN02452          7 RVFNFSAG-------PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLD----IP--DNYEV   73 (365)
T ss_pred             ceEeeeCC-------CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhC----CC--CCceE
Confidence            45677644       3556899998876553 110       0112211  1123455555555543    21  22 34


Q ss_pred             EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCC--CcccChhhHHHHHhcCCC
Q 015283          104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPK--TVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~i~~~~~  179 (410)
                      ++ ...|||.+.+.+  ..+.+.+||++++...+..+  +.+.++.+|...+.... +..  ...++++++    +. .+
T Consensus        74 ~~-l~Gsgt~~~ea~--~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~----~~-~~  144 (365)
T PLN02452         74 LF-LQGGASTQFAAI--PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEW----EL-TP  144 (365)
T ss_pred             EE-EeCccHHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHc----CC-CC
Confidence            44 267788888887  66667799988887755433  35566777763322211 111  123555554    22 12


Q ss_pred             CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      ....+.+++.+..||+.++  ++.++.      ++++|+|.+ +.++..+.+.+.+          .+++ .|.-|.+|+
T Consensus       145 ~~~~v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~-Ss~g~~pidv~~~----------~v~~-~saqK~lGP  204 (365)
T PLN02452        145 DAKFVHICANETIHGVEFK--DYPDVG------NVPLVADMS-SNFLSKPVDVSKY----------GVIY-AGAQKNVGP  204 (365)
T ss_pred             CCcEEEECCCCCCCcEecC--cccccC------CCeEEEECC-ccccCcccCHHHc----------CEEE-EecccccCC
Confidence            4455556677777898543  344442      389999999 6665432222211          2333 599999999


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHH--------hhccCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLK--------RLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNV  330 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~  330 (410)
                      +|+  |.+++   ++++++++.....        .....++.+|+..+..++...|+.-     ..+ .++.+.++.+++
T Consensus       205 ~Gl--~~v~v---r~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l-----~~~gGl~~~~~r~~~~  274 (365)
T PLN02452        205 SGV--TIVII---RKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDL-----LAQGGLKAMEKRNIRK  274 (365)
T ss_pred             CCe--EEEEE---cHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHH-----HHccCHHHHHHHHHHH
Confidence            885  66655   7776655322100        0011222345554444443333211     011 367888999999


Q ss_pred             HHHHHHHhhhcc-CCCCCcccccC--Ccc-eeee--cCCC-HHHHHHhhhcCcEEEcCCC------eEEecC-CCcccHH
Q 015283          331 RQKLFDSLSAKD-KSGKDWSFILR--QIG-MFSF--TGLN-KAQSDNMTNKWHVYMTKDG------RISLAG-LSLAKCE  396 (410)
Q Consensus       331 ~~~l~~~l~~~~-g~~~~~~~~~~--~~~-~~~~--~~~~-~~~~~~ll~~~gi~v~~~g------Ris~~~-~~~~~i~  396 (410)
                      .+++.+.|. +. |+-.  ....+  .+. ...|  .+.. .+.+.+.++++|+...+|.      |+|..+ ++.++++
T Consensus       275 a~~l~~~l~-~~~G~y~--~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~  351 (365)
T PLN02452        275 ADLLYDAID-ESNGFYV--CPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVE  351 (365)
T ss_pred             HHHHHHHHH-hCCCccc--CCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHH
Confidence            999999998 64 4311  11111  122 2222  2221 2334455566799999884      998554 7999999


Q ss_pred             HHHHHHHHHhhh
Q 015283          397 YLADAIIDSYHN  408 (410)
Q Consensus       397 ~~~~~l~~~l~~  408 (410)
                      .+++.+++.-++
T Consensus       352 ~L~~~m~~f~~~  363 (365)
T PLN02452        352 KLVAFMKDFQAK  363 (365)
T ss_pred             HHHHHHHHHHHh
Confidence            999999987654

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.27  E-value=5.9e-10  Score=103.60  Aligned_cols=313  Identities=15%  Similarity=0.052  Sum_probs=168.7

Q ss_pred             CcccccHHHHHHHHHhh-ccCC-------CccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283           49 LQPYVLDVVKKAENLML-ERGE-------NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA  118 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~-~~~~-------~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~  118 (410)
                      |+..+|+.|.+++.+.+ +...       ..+..+  ..-..+.++.+.+.+    +.+ +..+|+++ ..|||++.+.+
T Consensus        11 GPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll----~~P-~~y~Vlfl-~GggT~~~ea~   84 (364)
T PRK12462         11 GPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLL----GIP-DEYGVVFL-QGGSSLQFSMI   84 (364)
T ss_pred             CCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEE-eccHHHHHHHH
Confidence            44556888888776544 2111       122222  111234444444443    221 01245552 56688888887


Q ss_pred             HHHHHHhCCCCEEE--EcCCCCcc-hhhhhhhCCCCccceeeecCC--CcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          119 AALIERYFPGAKVL--ISSPTWGN-HKNIFNDARVPWSEYRYYDPK--TVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       119 ~~~~~~~~~gd~Vl--~~~p~y~~-~~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                        .++.+.+||+++  +....|+. +...++.+| ++..+......  +..++++.+    .. .+....+.+++-...|
T Consensus        85 --~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~-~~d~~~v~~t~NETst  156 (364)
T PRK12462         85 --PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DW-DARAPFRHYVSNETVE  156 (364)
T ss_pred             --HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----cc-CCCCcEEEEccCCCCc
Confidence              666778999665  44444442 344555666 44443321111  123444443    22 1234445556666777


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |+..+        ++.+.++.++|+|.+ +.++..+.+.+     .      ..++..|.=|.+|+||+  +.+++   +
T Consensus       157 Gv~~~--------~~~~~~~~llvvD~s-S~~~s~pid~~-----~------~dvi~agsQKnlgP~Gl--tvviv---s  211 (364)
T PRK12462        157 GLQFP--------DAAGLPDSPLIADMS-SDFMSRPFDVE-----A------YGMVYAHAQKNLGPAGV--TVAII---R  211 (364)
T ss_pred             eEecC--------cccccCCCeEEEEcC-chhhCCCCChH-----H------ccEEEeeccccCCCCce--EEEEE---C
Confidence            98775        223346899999999 77764432221     1      14556677899998886  55444   7


Q ss_pred             chhHHHHHHHHH-------hh-ccCcccCCChhHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          274 SDLAARVKSQLK-------RL-ARPMYSNPPVHGARIVANVVGNPALFDEWKA--EMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       274 ~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ++.+++......       .. ..+++.+|+.....++...|+   ++  .++  .++.+.++.+++.+.+.+.+. +..
T Consensus       212 ~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~---~i--~~e~GGl~~~~~r~~~ka~~ly~~id-~~~  285 (364)
T PRK12462        212 RALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLR---WI--RDEIGGVHAMRDINARKAAMLYATLD-ALN  285 (364)
T ss_pred             HHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHH---HH--HHhccCHHHHHHHHHHHHHHHHHHHH-hCC
Confidence            776665433111       11 112333555555444433322   11  122  457888889999999999998 665


Q ss_pred             -CCCCcccccCC-cceeeecCC-----CHHHHHHhhhcCcEEEcCCC------eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          344 -SGKDWSFILRQ-IGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG------RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       344 -~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~g------Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                       +-. ....+.. +-+-+...+     +.+++... ++.|+....|.      |+|+.+ ++.+.++.|++-+++.-++
T Consensus       286 ~~~~-~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a-~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~  362 (364)
T PRK12462        286 EVID-CHAHRAARSTMNVAFRFRQPRLDTLFKEQS-TEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR  362 (364)
T ss_pred             Cccc-CCCChhhcCcceEEEEcCCHHHHHHHHHHH-HHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence             210 1111111 111122222     22333344 45799887763      999665 6899999999998887554

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.24  E-value=5.1e-10  Score=100.61  Aligned_cols=203  Identities=21%  Similarity=0.209  Sum_probs=119.1

Q ss_pred             cHHHHHHHHHhhccC----CCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           54 LDVVKKAENLMLERG----ENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~----~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      ...|.+|+++.--..    ..+.|+ ...|-+.+.+-.|+.+..       ++.++=.+..+||+|+.++  ++..++||
T Consensus        26 q~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfga-------E~ALVRpq~vSGTHAi~~~--Lfg~LrpG   96 (403)
T PF06838_consen   26 QLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGA-------EDALVRPQFVSGTHAIALA--LFGVLRPG   96 (403)
T ss_dssp             HHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT--------SEEEEETTS-SHHHHHHHH--HHHH--TT
T ss_pred             HHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCc-------hhhhhcccccchHHHHHHH--HHhcCCCC
Confidence            356777776653111    123443 233445555555555322       3445446778999999998  77889999


Q ss_pred             CEEEEcC-CCCcchhhhh----------hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE-eCCCCCCCCCC
Q 015283          129 AKVLISS-PTWGNHKNIF----------NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL-HGCAHNPTGID  196 (410)
Q Consensus       129 d~Vl~~~-p~y~~~~~~~----------~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii-~~~p~NPtG~~  196 (410)
                      |+++... .-|......+          +..|.+...+++  .+++.+|++.+++.++.   ++++++ .-+....+=..
T Consensus        97 D~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L--~~dg~~D~~~i~~~~~~---~tk~v~IQRSrGYs~R~s  171 (403)
T PF06838_consen   97 DELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPL--TEDGTIDWEAIKKALKP---NTKMVLIQRSRGYSWRPS  171 (403)
T ss_dssp             -EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B---TTSSB-HHHHHHHHHT---TEEEEEEE-S-TTSSS--
T ss_pred             CeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEee--cCCCCcCHHHHHHhhcc---CceEEEEecCCCCCCCCC
Confidence            9999644 4555444433          345667777887  45578999999999985   555554 43334444456


Q ss_pred             CCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC--cceEEEEeC
Q 015283          197 PTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER--IGAMNVVCS  272 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r--~G~l~~~~~  272 (410)
                      ++.++++++++++++  .++++++|++|..|... .++.         +..-++..+|+-|..| .|+-  -||+++   
T Consensus       172 l~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~-~EP~---------~vGADl~aGSLIKNpG-GgiAptGGYIaG---  237 (403)
T PF06838_consen  172 LTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET-QEPT---------EVGADLMAGSLIKNPG-GGIAPTGGYIAG---  237 (403)
T ss_dssp             --HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS-S-GG---------GGT-SEEEEETTSGGG-TTT-SS-EEEEE---
T ss_pred             CCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc-cCcc---------ccchhheeccceeCCC-CCccCcCCEEec---
Confidence            789999999999986  58999999999999954 2222         2235789999999876 3432  277544   


Q ss_pred             CchhHHHHHHHH
Q 015283          273 SSDLAARVKSQL  284 (410)
Q Consensus       273 ~~~~~~~~~~~~  284 (410)
                      .++++++...++
T Consensus       238 r~~lVe~~a~RL  249 (403)
T PF06838_consen  238 RKDLVERAAYRL  249 (403)
T ss_dssp             SHHHHHHHHHHH
T ss_pred             hHHHHHHHHhhh
Confidence            899888876655

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.23  E-value=2.4e-09  Score=102.74  Aligned_cols=188  Identities=18%  Similarity=0.133  Sum_probs=123.9

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccc
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE  154 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~  154 (410)
                      |..-..+..+.+|+.+...      .. ..+  ++|+|+++..+  +.+.+.+||.|+++..|+-+....+-..|+.+++
T Consensus        68 p~G~i~eAqe~aA~~fgAd------~t-yFv--vNGTS~ank~v--i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvy  136 (557)
T COG1982          68 PEGPIKEAQELAARVFGAD------HT-YFV--VNGTSTANKAV--INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVY  136 (557)
T ss_pred             CCccHHHHHHHHHHHhCCC------ce-EEE--ECCccHHHHHH--HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEE
Confidence            3334456666677765332      22 333  68889999888  5666889999999999999998888899998888


Q ss_pred             eeee-cCC---CcccChhhHHHHHhcCCCC-cEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283          155 YRYY-DPK---TVGLDFEGMIADIKAAPGG-SFILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS  227 (410)
Q Consensus       155 v~~~-~~~---~~~~d~~~l~~~i~~~~~~-~~~ii~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~  227 (410)
                      +... ++.   -.+++.+.+.+.+.+++.. ..+++.    |||  |++++   +++|++.+.++++++..|+++.... 
T Consensus       137 l~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vit----npTYdGv~~n---~~~i~~~~~~~~a~v~~deah~~~~-  208 (557)
T COG1982         137 LEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVIT----NPTYDGVCYN---LRKIVELLHHYGAWVLYDEAHPAHF-  208 (557)
T ss_pred             ecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEe----cCccceEeec---HHHHHHHHhhcCceEEhhhcCcccc-
Confidence            7442 221   2478999998887775555 444443    776  88665   5566666899999999999954322 


Q ss_pred             CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC-chhHHHHHHHHHhh
Q 015283          228 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS-SDLAARVKSQLKRL  287 (410)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~-~~~~~~~~~~~~~~  287 (410)
                      + . .+..+  ........++++.|.+|.++  ++.-+.++.+..+ .-..+++...+...
T Consensus       209 ~-~-~~~l~--~~~~~~~~~~~tqS~HK~l~--alSQaS~iHv~~~~~~~~~r~nea~~~h  263 (557)
T COG1982         209 D-F-SPMLP--ESALNGGADFVTQSTHKLLA--ALSQASMIHVKDGRAVNHERFNEALMMH  263 (557)
T ss_pred             c-c-cccCc--chhhhcCceEEEechhhhhh--hhhhhHHHhhCCCccCCHHHHHHHHHHH
Confidence            1 1 11111  11223568899999999974  6666665432221 22345666666544

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.18  E-value=1.4e-09  Score=113.09  Aligned_cols=311  Identities=10%  Similarity=0.052  Sum_probs=175.1

Q ss_pred             eeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----Cccc----HHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           39 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGL----AAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        39 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      ++.|.|    ++ +.|+.+.+.+.+.  .++.+.|+|     .+|.    .++++.++++.    |.  +..++.+  +.
T Consensus        81 ig~G~y----~~-~~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt----G~--~~anaSl--~d  145 (954)
T PRK05367         81 IGQGYY----GT-HTPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT----GL--EIANASL--LD  145 (954)
T ss_pred             cCCCCC----CC-cCcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH----CC--Chhhccc--cc
Confidence            566766    32 3355565544442  233455655     2343    35556666664    32  2678888  88


Q ss_pred             ChhhHHHHHHHHHHHhCC--CCEEEEcCCCCcchhhhh----hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          110 SGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~--gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      ++|.+.+.+.... .+.+  +|+|++++..|+.+...+    +..|.+++.++..+      |++      .   ..+..
T Consensus       146 ~aTAa~ea~~~a~-~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d~~------~---~~~~~  209 (954)
T PRK05367        146 EATAAAEAMALAK-RVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------ALD------H---DDVFG  209 (954)
T ss_pred             cHHHHHHHHHHhh-hhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------CCC------c---ccEEE
Confidence            9999888774333 3445  499999999999887654    45788888887621      111      1   23444


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc---ccc
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL---GLY  260 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~---~~~  260 (410)
                      +++..| |.+|.+.   ++++|+++|+++|+++++|.....+...   .+       ..+.+.+++++|..|..   |..
T Consensus       210 vlvq~p-~~~G~i~---d~~~i~~~ah~~Gal~~vda~~~Al~~l---~~-------pge~GaDi~vgs~qkfg~P~g~G  275 (954)
T PRK05367        210 VLLQYP-GTSGEVR---DYTALIAAAHARGALVAVAADLLALTLL---TP-------PGEMGADIAVGSAQRFGVPMGFG  275 (954)
T ss_pred             EEEecC-CCCeeec---cHHHHHHHHHHcCCEEEEEehhhhccCC---CC-------hhhcCCCEEEeeCcccCCCCCCC
Confidence            443333 6789954   6888899999999999998764344432   11       13445678888888871   223


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHh--------------------hccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKR--------------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEM  320 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  320 (410)
                      |-..|++++   .+++.+++...+-.                    .++....+++.....++...+.--...-+-.+.+
T Consensus       276 GP~aGflav---r~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl  352 (954)
T PRK05367        276 GPHAAYFAV---RDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGL  352 (954)
T ss_pred             CCCEEEEEE---CHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhH
Confidence            334788865   56644433211110                    0011111111111111111110000000012346


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-Ccceeee-cCCCHH-HHHHhhhcCcEEEcCC--C--eEEecC-CCc
Q 015283          321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSF-TGLNKA-QSDNMTNKWHVYMTKD--G--RISLAG-LSL  392 (410)
Q Consensus       321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-~~~~~~~-~~~~~~-~~~~ll~~~gi~v~~~--g--Ris~~~-~~~  392 (410)
                      +++.++...+..++.+.|+ ..|.    +...+ ..+.+.+ .+.+.+ ..+++++ +||.+..-  +  |+|+.- .|+
T Consensus       353 ~~Ia~~~~~la~~l~~~L~-~~G~----~~~~~~~f~~~~~~~~~~~~~i~~~l~~-~gi~~~~~~~~~l~is~~e~~t~  426 (954)
T PRK05367        353 KAIARRVHRLAAILAAGLR-ALGL----EVVHDSFFDTLTVEVGGDAAAVLARALA-AGINLRRVDDDHVGISLDETTTR  426 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHH-hcCc----ccCCCCCCCeEEEeCCCCHHHHHHHHHH-CCceeccccCCEEEEEecccCCH
Confidence            7888999999999999998 7663    32211 1111211 122434 4556655 69988543  2  887653 388


Q ss_pred             ccHHHHHHHHH
Q 015283          393 AKCEYLADAII  403 (410)
Q Consensus       393 ~~i~~~~~~l~  403 (410)
                      ++|+.+++.|.
T Consensus       427 ~did~l~~~l~  437 (954)
T PRK05367        427 EDLAALLAVFG  437 (954)
T ss_pred             HHHHHHHHHHc
Confidence            99999999986

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.14  E-value=6e-10  Score=100.20  Aligned_cols=328  Identities=13%  Similarity=0.067  Sum_probs=188.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      .+++||++..++...++..+-+.+...++++-..  +-...|+...-+.++.+.|++++..       ++.|+.   +-|
T Consensus        94 ~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-------E~aivY---s~g  163 (467)
T KOG1358|consen   94 KDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-------EDAIVY---SYG  163 (467)
T ss_pred             ceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-------cceeee---ccc
Confidence            4688999988877777655455555556555222  2234587777888999999999643       466766   444


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-------C--C-c
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-------G--G-S  181 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-------~--~-~  181 (410)
                      =.++..+  +-+....||-|.+.+-...+....++...-.+.++..       .|.+++++.+.+..       .  . .
T Consensus       164 F~ti~S~--ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~R  234 (467)
T KOG1358|consen  164 FSTIESA--IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTR  234 (467)
T ss_pred             cchhhhc--chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccce
Confidence            4555554  2233559999998887766666666655556666654       26677766654421       1  1 3


Q ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC
Q 015283          182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA  261 (410)
Q Consensus       182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  261 (410)
                      +.++.-...-+||.   ..++.+|+++..||...+|+||.|+....+... ....-..-.+..+-+++++|++-+++..|
T Consensus       235 rfiv~EGl~~N~g~---i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~G-rGvteH~~v~~~~iDiv~~sm~~alas~G  310 (467)
T KOG1358|consen  235 RFIVVEGLYANTGD---ICPLPEIVKLKNKYKFRVILDESLSFGVLGKTG-RGVTEHFGVPITDIDIVTASMETALASGG  310 (467)
T ss_pred             EEEEEEeeccCCCc---ccccHHHHHHHhhheEEEEEecccccccccccC-ccccccCCCCccceeeeeecccccccccC
Confidence            44455556778898   556778888899999999999998755433111 00000011223456789999999987555


Q ss_pred             CCcceEEEEeCCchhHHHHHHHHHhhccC--ccc--CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          262 ERIGAMNVVCSSSDLAARVKSQLKRLARP--MYS--NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       262 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                         |+..+   +.-    +.. .+.+..+  .++  -|+.++ .++...+.-.+    |.   ..+.+.++.....+.+.
T Consensus       311 ---gFc~G---~~~----i~~-hQrLSg~~Y~fSAslPp~la-~aa~~ai~i~~----~~---p~~~~~L~~k~~~~H~~  371 (467)
T KOG1358|consen  311 ---GFCAG---KSF----IAD-HQRLSGSGYCFSASLPPYLA-GAAIKAILIEE----WN---PEIVQPLRAKVAKFHAA  371 (467)
T ss_pred             ---ceeec---cee----eEe-eeeccccceeeeccCchhhh-hhHHHHHHHHh----hC---cchhhhhhccccccchh
Confidence               66432   332    111 1222111  122  333333 33322221110    11   23445566666666777


Q ss_pred             hhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCC-------------C-eEEecC-
Q 015283          338 LSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKD-------------G-RISLAG-  389 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~-------------g-Ris~~~-  389 (410)
                      |+ ....   +......-+....+.+         +    .+.+++.+.+ |+.++..             + ||++.. 
T Consensus       372 l~-~~s~---~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~  446 (467)
T KOG1358|consen  372 LS-SNSG---FIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAG  446 (467)
T ss_pred             hh-cCCc---eEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCC
Confidence            76 4310   2222222222222211         1    2345566665 7776543             1 888765 


Q ss_pred             CCcccHHHHHHHHHHHhhh
Q 015283          390 LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++++.|+++...
T Consensus       447 ~seeel~ra~~~ik~~~~~  465 (467)
T KOG1358|consen  447 MSEEELERAAELIKEVASA  465 (467)
T ss_pred             CCHHHHHHHHHHHHHHHHh
Confidence            6999999999999998654

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=99.14  E-value=4.9e-08  Score=87.25  Aligned_cols=331  Identities=14%  Similarity=0.112  Sum_probs=196.3

Q ss_pred             cCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh
Q 015283           46 TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY  125 (410)
Q Consensus        46 ~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~  125 (410)
                      +.+|+..++..-..++..    + +-.|....+...|++++.+.+. .       +.++.  |+-|.+|-.++.-++...
T Consensus        53 TDSGTgams~~qwaamm~----G-DEAYagsrs~~~L~~avkdifG-f-------q~~iP--thQGRgAE~Il~~i~ik~  117 (471)
T COG3033          53 TDSGTGAMTDKQWAAMMR----G-DEAYAGSRSYYALADAVKDIFG-F-------QYTIP--THQGRGAENILIPILIKK  117 (471)
T ss_pred             ccCCcccccHHHHHHHhc----c-chhhcccccHHHHHHHHHHhcC-c-------eeeee--ccCCccHHHHHHHHHhhh
Confidence            444555445444444322    2 3668888889999999999962 2       34555  888998888765444221


Q ss_pred             ---CCCCEEEEcCC-CCcchhhhhhhCCCCccceeeecCC--------CcccChhhHHHHHhcCCCC--cEEEEeCCCCC
Q 015283          126 ---FPGAKVLISSP-TWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAAPGG--SFILLHGCAHN  191 (410)
Q Consensus       126 ---~~gd~Vl~~~p-~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~~~~--~~~ii~~~p~N  191 (410)
                         .||.+.++++- .|.......+..|+.++.++..+..        .+.+|++.|+++|.+.+..  +.+++..+.|.
T Consensus       118 ~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~Ns  197 (471)
T COG3033         118 GEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNS  197 (471)
T ss_pred             ccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccc
Confidence               26655555554 4455666777889888877764321        1368999999999885433  33333333445


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCC-C---CCCC-CCCCchhHhHHHhhcC--CcEEEEecccccccccCCCc
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-G---FASG-SLDNDASSVRLFATRG--MELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~---~~~~-~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G~r~  264 (410)
                      -.|+..|.+.+++..++|++|++.++.|.+.. .   |.-. +.+-..|++.....+.  ..+-...|..|.- +..+ -
T Consensus       198 agGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~-lvnm-G  275 (471)
T COG3033         198 AGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDG-LVNM-G  275 (471)
T ss_pred             cCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccc-eecc-c
Confidence            57999999999999999999999999999842 1   2111 1112345555443321  1334455777763 2222 1


Q ss_pred             ceEEEEeCCc---hhHHHHHHHHHh-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283          265 GAMNVVCSSS---DLAARVKSQLKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA  340 (410)
Q Consensus       265 G~l~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  340 (410)
                      |++.  .+++   ++.+..+...-- .-..++.+...-...+.+.-|.+. ..      ....+.++. ..++|.++|. 
T Consensus       276 Gfl~--~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~-~~------~~yl~~Rv~-Qv~YL~~~l~-  344 (471)
T COG3033         276 GFLC--FKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREG-VN------FDYLAHRVA-QVQYLADGLE-  344 (471)
T ss_pred             cEEE--ecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHh-cC------cHHHHHHHH-HHHHHHHHHH-
Confidence            5553  2343   233333221110 111233333333334444334332 11      012233333 4567888998 


Q ss_pred             ccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCCC---------------------eEE
Q 015283          341 KDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG---------------------RIS  386 (410)
Q Consensus       341 ~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~g---------------------Ris  386 (410)
                      +.|.    .+..|.+|.-+|++.             ...++.+|.++.||-.+--|                     |++
T Consensus       345 ~~GV----pi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRlt  420 (471)
T COG3033         345 EAGV----PIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLT  420 (471)
T ss_pred             hcCC----eeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEe
Confidence            8883    566777787777642             13457788888898765422                     887


Q ss_pred             ecC--CCcccHHHHHHHHHHHhhh
Q 015283          387 LAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       387 ~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                      +..  .|.+.+|.+++.++++.++
T Consensus       421 ipRrtYt~~HmD~V~~a~~~l~e~  444 (471)
T COG3033         421 IPRRTYTQTHMDFVIEAFKALKEN  444 (471)
T ss_pred             ccccccchhHHHHHHHHHHHHHhc
Confidence            663  3778899999999888754

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.14  E-value=5.6e-09  Score=98.67  Aligned_cols=269  Identities=14%  Similarity=0.031  Sum_probs=158.3

Q ss_pred             HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-----CceEEEecCChhhHHHHHHHHHHHh----
Q 015283           55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-----QRVATVQGLSGTGSLRLAAALIERY----  125 (410)
Q Consensus        55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-----~~i~~~~t~ggt~a~~~~~~~~~~~----  125 (410)
                      ..+.+.+...++... ..|.......++.+.+.+|+.+..|.+-+.     ..-++  |+|||+++..+....+..    
T Consensus        54 ~i~~~~l~~~~n~n~-~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~--t~Ggt~anl~al~aAR~~~~~~  130 (373)
T PF00282_consen   54 SILADLLASALNQNG-FTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVF--TSGGTEANLYALLAARERALPR  130 (373)
T ss_dssp             HHHHHHHHHHHT-BT-TSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhcccc-cccccccccccchHHHHHHHHHHhCCcccccccCCCceeE--eccchHHHHHHHHHHHHHHhhh
Confidence            444555666665543 445445567789999999988887775211     23445  899999998764333321    


Q ss_pred             --CCC-----C-EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCC
Q 015283          126 --FPG-----A-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTG  194 (410)
Q Consensus       126 --~~g-----d-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG  194 (410)
                        ..|     + .|++++-++.+....+...|..++.||+.  +++.+|+++|++.+.+.   +..+.+++.+.....||
T Consensus       131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~--~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G  208 (373)
T PF00282_consen  131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTD--EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTG  208 (373)
T ss_dssp             HHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BB--TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred             hhhcccccccccccccccccccHHHHhcceeeeEEEEecCC--cchhhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence              112     2 46666668889999999999999999984  46789999999887652   22344555566677788


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .   .+++++|+++|+++++++.+|.+|.+..+-.....  ..  ......-+-+..+.+|.++.| ...|++  ..+++
T Consensus       209 a---~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~--~~--~~gi~~adSit~d~HK~l~~P-~~~~~~--l~r~~  278 (373)
T PF00282_consen  209 A---IDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYR--HL--LFGIERADSITIDPHKWLGVP-YGCGVL--LVRDK  278 (373)
T ss_dssp             B---B-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTG--GG--GTTGGGESEEEEETTTTTS-S-SS-EEE--EESSG
T ss_pred             c---ccCHHHHhhhccccceeeeeccccccccccccccc--cc--ccccccccccccchhhhhcCC-ccceeE--Eeecc
Confidence            8   78899999999999999999999988332100011  11  111112334456899999855 667877  56666


Q ss_pred             hhHHHHHHHHHhhcc------------Cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283          275 DLAARVKSQLKRLAR------------PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK  341 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  341 (410)
                      .........-..+..            ..+. ..+. ...++..++.   +...=.+.+++..++..+..+++.+.|+ +
T Consensus       279 ~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~---l~~~G~~G~~~~i~~~~~~a~~l~~~l~-~  353 (373)
T PF00282_consen  279 SDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWAT---LKSLGREGYRERIRRCIELARYLADRLR-K  353 (373)
T ss_dssp             GGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             cchHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence            643321100001111            0011 2233 3344322221   1111134566777778888899999998 7


Q ss_pred             cC
Q 015283          342 DK  343 (410)
Q Consensus       342 ~g  343 (410)
                      .+
T Consensus       354 ~~  355 (373)
T PF00282_consen  354 DP  355 (373)
T ss_dssp             ST
T ss_pred             CC
Confidence            65

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.08  E-value=1.1e-08  Score=106.13  Aligned_cols=315  Identities=12%  Similarity=0.046  Sum_probs=173.5

Q ss_pred             eeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCC--cc----cHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           39 LGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPI--EG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        39 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~--~g----~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ++.|.|    ++ .+|+.+.+.+.+.... ...+.|.+.  +|    ..++++.++++..-      +++++.+  +.++
T Consensus       108 iG~G~y----~~-~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~------~~anaSL--~d~a  174 (993)
T PLN02414        108 IGMGYY----NT-HVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGL------PMSNASL--LDEG  174 (993)
T ss_pred             cCCCCC----Cc-cCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCC------ChhhEee--cCCh
Confidence            455655    22 2467776776654422 222455543  34    45677777777422      2688999  8999


Q ss_pred             hhHHHHHHHHHHHhCCC--CEEEEcCCCCcchhhhhh----hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283          112 TGSLRLAAALIERYFPG--AKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL  185 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~g--d~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii  185 (410)
                      |.+.+.+.... .+.+|  |+|++++..|+.+...++    ..|.+++.++..+     .+      ...   .....++
T Consensus       175 TAaaea~~~a~-~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~-----~~------~~~---~~v~~vl  239 (993)
T PLN02414        175 TAAAEAMAMCN-NILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD-----FD------YSS---GDVCGVL  239 (993)
T ss_pred             HHHHHHHHHHH-hcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh-----hc------ccc---CceEEEE
Confidence            99999874333 34544  789999999999876665    4577777776521     01      001   1232333


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc---cccCC
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL---GLYAE  262 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~---~~~G~  262 (410)
                      + .--|.+|.+   .++++|+++|+++|+++++ .+ ..++.....    +    ....+.++++++..|..   |..|-
T Consensus       240 v-q~P~~~G~v---~dv~~I~~~ah~~GaL~iV-aa-d~lal~~l~----~----pge~GADi~vgsgqKwg~P~G~GGP  305 (993)
T PLN02414        240 V-QYPATDGEV---LDYAEFVKNAHANGVKVVM-AT-DLLALTMLK----P----PGEWGADIVVGSAQRFGVPMGYGGP  305 (993)
T ss_pred             E-ecCCCCeEE---cCHHHHHHHHHHcCCEEEE-EE-CHHHhcCCC----C----HhhccCcEEEECCCccccCCCCCCC
Confidence            1 122348995   4577888889999999999 44 222221111    0    12335678888888876   22345


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHh--------------------hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKR--------------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~  322 (410)
                      +.|++++   .++..+.+-..+-.                    .++....+++.....++...+.--....+-...+++
T Consensus       306 ~aGflav---r~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~  382 (993)
T PLN02414        306 HAAFLAT---SQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT  382 (993)
T ss_pred             CeeEEEE---CHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHH
Confidence            5788865   55543322100000                    000011111221111211111100000000133578


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCccccc-CCcceeee-cCCCHHHHHHhhhcCcEEEcCC--C--eEEecC-CCcccH
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-RQIGMFSF-TGLNKAQSDNMTNKWHVYMTKD--G--RISLAG-LSLAKC  395 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~~--g--Ris~~~-~~~~~i  395 (410)
                      +.+++.++..++.+.|. ..|.    +... +..+.+.+ .+...+..+++.+ +||.+...  +  |+|+.. .|++||
T Consensus       383 Ia~ri~~la~~l~~~L~-~~G~----~~~~~~~f~~vt~~~~~~~~v~~~L~~-~gI~l~~~~~~~lrvs~~e~~T~edI  456 (993)
T PLN02414        383 IAQRVHGLAGVFAAGLK-KLGF----QVQSLPFFDTVKVKCSDADAIADAAAK-VGINLRVVDANTVTVSFDETTTLEDV  456 (993)
T ss_pred             HHHHHHHHHHHHHHHHh-hcCC----ccCCCCCcCeEEEecCCHHHHHHHHHH-CCCeeEEecCCeEEEEeeccCCHHHH
Confidence            88999999999999998 7773    3322 22222222 1223334556654 69877533  3  888654 388999


Q ss_pred             HHHHHHHHH
Q 015283          396 EYLADAIID  404 (410)
Q Consensus       396 ~~~~~~l~~  404 (410)
                      +.+++.|+.
T Consensus       457 d~L~~~l~~  465 (993)
T PLN02414        457 DKLFKVFAG  465 (993)
T ss_pred             HHHHHHHcc
Confidence            999999963

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.04  E-value=5e-10  Score=91.19  Aligned_cols=66  Identities=18%  Similarity=0.278  Sum_probs=57.1

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCC--CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN  140 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~--~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~  140 (410)
                      ..|.+..|.+++|+++++|+.+.++  ..+++++|++  |+|++++++.++  ...+.+||.|++++|+|+.
T Consensus        86 a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~l~--~~l~dpGD~VlVp~P~Y~~  153 (153)
T PLN02994         86 ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEIIM--FCIADPGDAFLVPTPYYAA  153 (153)
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHHHH--HHHcCCCCEEEEeCCCCCC
Confidence            4488889999999999999988777  5678899999  999999999984  3447799999999999974

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=99.02  E-value=6.4e-08  Score=89.51  Aligned_cols=361  Identities=15%  Similarity=0.135  Sum_probs=197.5

Q ss_pred             CCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCC
Q 015283           16 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN   95 (410)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~   95 (410)
                      ++.+.+.++.+...........++..|..  ..+.+....-..++..+. +.-+..-|+   +..++..+...++...++
T Consensus        61 l~~d~v~~~i~~~~~ld~~~~~~~vS~~v--~~~~~~~~~l~~~~~~k~-N~l~~d~fp---~~~~~e~~~Vnm~~~L~~  134 (491)
T KOG1383|consen   61 LPKDAVLELINDELMLDGNPRLGLASGVV--YWGEPELDKLIMEAYNKF-NPLHPDEFP---VVRKLEAECVNMIANLFN  134 (491)
T ss_pred             CCHHHHHHHHHHHhccCCCcccCeeeEEE--ecCCcchhhHHHHHHhhc-CccCccccc---hhHHHHHHHHHHHHHHhc
Confidence            34455555554443322234566666664  233322223333334332 222223353   455666666666555544


Q ss_pred             CcccCCceEEEecCChhhHHHHHHHHHHHhC---CC---CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           96 SVLKEQRVATVQGLSGTGSLRLAAALIERYF---PG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        96 ~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~---~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      .+  ++ .+-..|.|||+++.++-+-.....   .|   ..++++...+..+....+..+.+++.+|+. +..+.+|+.+
T Consensus       135 ~~--~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~-~~~~~~D~~k  210 (491)
T KOG1383|consen  135 AP--SD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLD-EGDYRVDPGK  210 (491)
T ss_pred             CC--cc-ccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeecc-ccceEecHHH
Confidence            33  22 222338999999555433222221   23   456666777778888888889999999984 4778999999


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH-cCCcccccccCCCCCC--CCCCCchhHhHHHhhcCCc
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGME  246 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Deay~~~~~--~~~~~~~~~~~~~~~~~~~  246 (410)
                      +.+.+++   +++.++..-|+.|+|.   .++.++|.++..+ +++.+.+|.+-.+|..  +......+.++.   .+-.
T Consensus       211 ~~~~i~e---Nti~lv~~~~~~p~G~---~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~---p~V~  281 (491)
T KOG1383|consen  211 VVRMIDE---NTIMLVGSLPNFPTGE---IEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRV---PGVT  281 (491)
T ss_pred             HHHHhcc---ceEEEEEEcCCCCccc---hhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCC---CCce
Confidence            9999997   7888888889999999   8888899988998 9999999999777764  211111222211   1111


Q ss_pred             EEEEecccccccccCCCcceEEEEeCCchhH-HHHH---HHHHhhccCcccCCChhHHH-HH--HHHhCChhhHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLA-ARVK---SQLKRLARPMYSNPPVHGAR-IV--ANVVGNPALFDEWKAE  319 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~-~a--~~~l~~~~~~~~~~~~  319 (410)
                      -|.+ +-+| +|+.--..||++  -.++++. .++.   +++.....+.+.+.+..+.. ++  +.+++-+      .+.
T Consensus       282 Sisa-~~HK-YGl~~~G~~~vl--~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG------~eG  351 (491)
T KOG1383|consen  282 SISA-DGHK-YGLAPAGSSWVL--YRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLG------EEG  351 (491)
T ss_pred             eEee-ccce-eeeeecCcEEEE--EcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhh------HHH
Confidence            1222 2233 333333358874  3444421 1111   01111111112222222212 22  3333322      344


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCCCccc-ccCCcceeeecC--CCHHHHHHhhhcCcEEEc----CCC-eEEecCC-
Q 015283          320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTG--LNKAQSDNMTNKWHVYMT----KDG-RISLAGL-  390 (410)
Q Consensus       320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~--~~~~~~~~ll~~~gi~v~----~~g-Ris~~~~-  390 (410)
                      ..+..+++.+....++++++ +.+.   +.+ -.|..++..|-.  ++.-.+..+|.+.|-.+.    |.+ -|++..+ 
T Consensus       352 Y~~~~~~ive~~~~l~egie-~i~~---i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~  427 (491)
T KOG1383|consen  352 YRENTQNIVETARKLREGIE-NIKG---IKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVH  427 (491)
T ss_pred             HHHHHHHHHHHHHHHHHhhh-cccc---ceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCCCceEEEEEeee
Confidence            56777788889999999998 6642   332 334444334432  233334455555677663    333 4444321 


Q ss_pred             -CcccHHHHHHHHHHHhhhc
Q 015283          391 -SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       391 -~~~~i~~~~~~l~~~l~~~  409 (410)
                       .++-.++++.-|+++++++
T Consensus       428 ~~~~~A~~~v~Di~~~~~el  447 (491)
T KOG1383|consen  428 AREDVADRFVADIRKVVEEL  447 (491)
T ss_pred             ccHHHHHHHHHHHHHHHHHH
Confidence             3344577888888887654

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=98.89  E-value=1e-06  Score=79.06  Aligned_cols=334  Identities=14%  Similarity=0.124  Sum_probs=186.9

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccHHHHHHHHHH-hcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAEL-LFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~aia~~-~~~~~~~~~~~~~i~~~~t  108 (410)
                      .-|.|-..++     +  .+..|++++-..+.+...-+|+.     ..-.-+-.|.+++. -...++.+. ..+=+-||.
T Consensus        41 ~gieLIaSEN-----F--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp-~kWGVNVQp  112 (477)
T KOG2467|consen   41 RGIELIASEN-----F--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDP-EKWGVNVQP  112 (477)
T ss_pred             cceeEeeccc-----c--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCH-HHCceeecc
Confidence            4467776654     2  36889998877765433344432     11112222222221 112233321 234444667


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-----hhhhCCCCc-----cceeeecCCCcccChhhHHHHHhcCC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-----IFNDARVPW-----SEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~-----~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      .+|+-|+..+  ..+.+.|+|+|+-.+.-.+++.+     --+...+.-     .++.+ ++.++-+|.|.|++..... 
T Consensus       113 ~SGSPANfav--Ytall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv-~~~TG~IDYD~Le~~A~~f-  188 (477)
T KOG2467|consen  113 YSGSPANFAV--YTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV-DPSTGYIDYDKLEKTATLF-  188 (477)
T ss_pred             CCCCchhhHH--HhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceee-CCCCCceehHHHHHHHHhc-
Confidence            8899999887  34558899999976533322211     111111111     22233 3466779999998776553 


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       ++++++...-.  ....+   |...+.++|.+.|++++.|.++- +++..+.  -+.+      ...++|+..+..|++
T Consensus       189 -rPk~iiaG~Sa--Y~R~~---DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~v--ipsP------Fey~DiVTTTTHKsL  254 (477)
T KOG2467|consen  189 -RPKLIIAGTSA--YSRLI---DYARFRKIADKVGAYLMADMAHISGLVAAGV--IPSP------FEYCDIVTTTTHKSL  254 (477)
T ss_pred             -CCcEEEecccc--chhhc---cHHHHHHHHHhcCceeehhhhhHHHHHhccc--CCCc------ccccceeeccccccc
Confidence             56677743222  22333   45556666899999999999973 3332211  0111      123788899999986


Q ss_pred             cccCCCcceEEEEeCCc--------hhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSS--------DLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                        -|-|.|.++..-+.+        ++.-.+.+.+....++... +|-.+...+++-+|+.-.     .-+++++.++..
T Consensus       255 --RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~-----tpefk~Yq~qV~  327 (477)
T KOG2467|consen  255 --RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM-----TPEFKEYQKQVL  327 (477)
T ss_pred             --cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC-----CHHHHHHHHHHH
Confidence              588877776533211        1122344444444444322 444444343333343211     122468888899


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCccee-eec-----CCCHHHHHHhhhcCcEEE------------cCCC-eEEec-
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFT-----GLNKAQSDNMTNKWHVYM------------TKDG-RISLA-  388 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~ll~~~gi~v------------~~~g-Ris~~-  388 (410)
                      ++.+.|.+.|. +.|    ++.....+-.+ +.+     |++...+++.++..+|..            .|+| ||.-+ 
T Consensus       328 ~Nakala~~l~-~~G----y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPA  402 (477)
T KOG2467|consen  328 KNAKALASALI-SRG----YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPA  402 (477)
T ss_pred             HHHHHHHHHHH-HcC----ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchh
Confidence            99999999999 888    45555444444 333     446667777777656644            3445 88533 


Q ss_pred             ----CCCcccHHHHHHHHHHHh
Q 015283          389 ----GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       389 ----~~~~~~i~~~~~~l~~~l  406 (410)
                          +.-++|++++.+-|.+++
T Consensus       403 mTsRG~~e~df~~v~~fi~~av  424 (477)
T KOG2467|consen  403 MTSRGFGEEDFEKVADFIDRAV  424 (477)
T ss_pred             hcccCccHHHHHHHHHHHHHHH
Confidence                346788888888887665

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.88  E-value=3.6e-07  Score=83.93  Aligned_cols=141  Identities=16%  Similarity=0.181  Sum_probs=103.7

Q ss_pred             CccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC--CC----CEEEEcCCCCcc
Q 015283           70 NKEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PG----AKVLISSPTWGN  140 (410)
Q Consensus        70 ~~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~--~g----d~Vl~~~p~y~~  140 (410)
                      .+.|.|   .+|..++...+.+|+..-.|.    +.|.+ |.+.|+++-..-..+.+.+.  .|    +.+++|+..++.
T Consensus        95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsL-QP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT  169 (496)
T COG1003          95 IHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT  169 (496)
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeec-cCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence            356666   457778888888887666553    44544 34445544443222344432  33    689999999999


Q ss_pred             hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccc
Q 015283          141 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV  220 (410)
Q Consensus       141 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De  220 (410)
                      ....+...|.+++.|++  .+++.+|+++|+++..+   ++..+++++|+ ..|..  .+++++|+++.+++|..+..|.
T Consensus       170 NPASAam~G~~VV~V~~--~~~G~VDlddLk~k~~~---~~AalMiTnPs-T~GvF--E~~I~ei~~ivH~~Gg~vY~DG  241 (496)
T COG1003         170 NPASAAMAGFKVVVVKC--DENGNVDLDDLRAKAED---NLAALMITNPS-TLGVF--EEDIREICEIVHEAGGQVYYDG  241 (496)
T ss_pred             ChhhHhhcCceEEEEec--CCCCCccHHHHHHHhcc---ceeEEEeccCc-ccccc--hhhHHHHHHHHHHcCCEEEecC
Confidence            99899999999999998  56778999999999985   77777777765 23542  6679999999999999999999


Q ss_pred             cCC
Q 015283          221 AYQ  223 (410)
Q Consensus       221 ay~  223 (410)
                      +-.
T Consensus       242 ANl  244 (496)
T COG1003         242 ANL  244 (496)
T ss_pred             cch
Confidence            943

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=98.83  E-value=4.1e-06  Score=83.31  Aligned_cols=166  Identities=8%  Similarity=0.018  Sum_probs=111.6

Q ss_pred             cHHHH-HHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC--C---
Q 015283           54 LDVVK-KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--P---  127 (410)
Q Consensus        54 ~~~v~-~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~--~---  127 (410)
                      ++.+. +.+....+... ..|........+.+.+.+++.+..|.+  ...-.+  |+|||.|+..+..+.+...  |   
T Consensus        96 ~paila~~~a~~~N~n~-~~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~--TsGGT~ANl~aL~~AR~~k~~p~a~  170 (608)
T TIGR03811        96 MPAILAYNYAMLWNGNN-VAYESSPATSQMEEEVGKEFATLMGYK--NGWGHI--VADGSLANLEGLWYARNIKSLPFAM  170 (608)
T ss_pred             HHHHHHHHHHHHhCCCC-CccccCchHHHHHHHHHHHHHHHhCCC--CCCeEE--eCChHHHHHHHHHHHHHhhhccchh
Confidence            45554 44444444432 555555567788888888887777654  234445  8999999987644443321  1   


Q ss_pred             ---------------------------------------------C------CEEEEcCCCCcchhhhhhhCCC---Ccc
Q 015283          128 ---------------------------------------------G------AKVLISSPTWGNHKNIFNDARV---PWS  153 (410)
Q Consensus       128 ---------------------------------------------g------d~Vl~~~p~y~~~~~~~~~~g~---~~~  153 (410)
                                                                   |      -.++++...|.++.+.+...|.   +++
T Consensus       171 ~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv  250 (608)
T TIGR03811       171 KEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVI  250 (608)
T ss_pred             hhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEE
Confidence                                                         0      0577888888889989888888   578


Q ss_pred             ceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCC--cccccccCCCCC
Q 015283          154 EYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH--IPFFDVAYQGFA  226 (410)
Q Consensus       154 ~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~--~li~Deay~~~~  226 (410)
                      .||+  ++++.+|++.|++.+.+   .+..+..|+-+.....+|.+=+.+++.+|++.++++|+  ++.+|.||.++.
T Consensus       251 ~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~  326 (608)
T TIGR03811       251 PVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG  326 (608)
T ss_pred             Eeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence            8888  46688999999988864   23334555556677888984444444444444478898  699999999864

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.78  E-value=1.6e-06  Score=80.00  Aligned_cols=233  Identities=17%  Similarity=0.093  Sum_probs=139.8

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCccc--HHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGL--AAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~--~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ++||..--+.....|-+..++++.+++.+.........|.-..|-  .+++ .+++.+....+    .+..++  +++.+
T Consensus        21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~~~~~~----aea~~i--vnnn~   93 (395)
T COG1921          21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELLCGLTG----AEAAAI--VNNNA   93 (395)
T ss_pred             hhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHHhcccc----hhheee--ECCcH
Confidence            456655322223445555589999988887755332344333332  2333 33444333322    356666  67777


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcC-----CCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE-e
Q 015283          113 GSLRLAAALIERYFPGAKVLISS-----PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL-H  186 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~-----p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii-~  186 (410)
                      .|+..+   +..+.++.+|++.-     ++.++...+++..|++++++-..+.    ....+++..|++   ++.+++ +
T Consensus        94 aAVll~---~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~----t~~~d~~~AIne---~ta~llkV  163 (395)
T COG1921          94 AAVLLT---LNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTNR----THLKDYELAINE---NTALLLKV  163 (395)
T ss_pred             HHHHHH---HhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEecccCc----CCHHHHHHHhcc---CCeeEEEE
Confidence            777776   33444455555433     4677888999999999998865332    467888888987   555555 3


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      -+.|.+.--.++   .++++++|+++|+++++|.+-......     .+.++.+... ..+++++|-.|.||  |.+.|.
T Consensus       164 ~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~-----e~~l~~~la~-GaDLV~~SgdKllg--GPqaGi  232 (395)
T COG1921         164 HSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDK-----EPDLREALAL-GADLVSFSGDKLLG--GPQAGI  232 (395)
T ss_pred             eecccccccccc---HHHHHHHHHHcCCCEEEecCCcccccc-----ccchhHHHhc-CCCEEEEecchhcC--CCccce
Confidence            333332212233   455677799999999999994333321     1233344433 36778889999986  777888


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCcccCCChhHH
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA  300 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (410)
                      +++   .++++++++..-  ..+.+......++.
T Consensus       233 i~G---kKelI~~lq~~~--l~Ralrv~K~tla~  261 (395)
T COG1921         233 IVG---KKELIEKLQSHP--LKRALRVDKETLAA  261 (395)
T ss_pred             Eec---hHHHHHHHHhhh--hhhhhhcCcHhHHH
Confidence            655   999888876632  33444444444433

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=98.70  E-value=6.7e-06  Score=72.99  Aligned_cols=297  Identities=11%  Similarity=0.025  Sum_probs=160.1

Q ss_pred             ccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC--CCCEEEEcCCCCcchhhhhhhCCCCccce
Q 015283           78 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PGAKVLISSPTWGNHKNIFNDARVPWSEY  155 (410)
Q Consensus        78 g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v  155 (410)
                      +..++-+.+...+....|..  ++++++  +.+.+-.+.-.  +.+.++  +|++|++++-.-.+...+...--+++..+
T Consensus        73 ~W~~lp~~lgdklApLiGA~--~~Evvv--~dtts~nl~k~--L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~  146 (407)
T COG3844          73 DWFDLPERLGDKLAPLIGAR--AGEVVV--TDTTSINLFKV--LAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGI  146 (407)
T ss_pred             chhhchhHHHHHhhhhhcCC--CCceEE--eCCcchHHHHH--HHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcc
Confidence            33445555555554444432  567766  54444444443  445555  79999998854333222111111111111


Q ss_pred             eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283          156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS  235 (410)
Q Consensus       156 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~  235 (410)
                      -.  .-.....+.++++.+..   .+.++++++.+.-||+.+   ++.+|-.+++++|++++.|-+++.-... .+    
T Consensus       147 ~~--~~~~~~~P~~~~~~~~d---d~AvV~L~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsaGavp-~~----  213 (407)
T COG3844         147 GY--DLEGVIAPRALEEAITD---DVAVVLLSHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSAGAVP-VD----  213 (407)
T ss_pred             cc--cceeeeChHHHHHhhcc---ceEEEEecccccccccee---eHHHHHHHHHhcCceEEeehhcccCCcc-ee----
Confidence            11  11122456788888875   788888899999999955   5667777799999999999998765542 11    


Q ss_pred             HhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHHHHH-------------------hhccCcccCC
Q 015283          236 SVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLK-------------------RLARPMYSNP  295 (410)
Q Consensus       236 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~  295 (410)
                           +...+.++-+++..|.++. ||- .+++++   .+...++....+.                   ...+..-+++
T Consensus       214 -----Lh~~gaDfaigcsyKYLNgGPGa-pa~l~v---~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~  284 (407)
T COG3844         214 -----LHAAGADFAIGCSYKYLNGGPGA-PAGLFV---APRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQ  284 (407)
T ss_pred             -----ecccCCCeeeeeeceeccCCCCC-ceeEEe---ccccccccccccccccCCCCcchhhhccCcCccccceeeCCc
Confidence                 1223456778888888732 443 344443   2222222211111                   1111112234


Q ss_pred             ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC-----cceeeec-CCCHHHHH
Q 015283          296 PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-----IGMFSFT-GLNKAQSD  369 (410)
Q Consensus       296 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-----~~~~~~~-~~~~~~~~  369 (410)
                      +.++..++...|+-..     .-.+.+.|++--....++.+.++ ..-...++....|.     ++...+. +.....++
T Consensus       285 ~V~s~aal~~aLDifa-----~~~i~~lR~kSlaLTd~fieLvE-a~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~q  358 (407)
T COG3844         285 PVLSLAALEGALDIFA-----DVDITELRKKSLALTDYFIELVE-ARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQ  358 (407)
T ss_pred             chhhhHHHhhhhhhhh-----hcCHHHHHHhhhHHHHHHHHHHH-hccccCCcEEeccchhhhccceeeEecCcHHHHHH
Confidence            4544444433333211     11145667776667777777665 33111123333331     2222221 21234455


Q ss_pred             HhhhcCcEEEc--CCC--eEEecC--CCcccHHHHHHHHHHHhhhc
Q 015283          370 NMTNKWHVYMT--KDG--RISLAG--LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       370 ~ll~~~gi~v~--~~g--Ris~~~--~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .|.+ +||...  +.+  ||.++.  .+-.|+=.+++.|.+++.+.
T Consensus       359 aLi~-rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~  403 (407)
T COG3844         359 ALID-RGVIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL  403 (407)
T ss_pred             HHHH-cCccccccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence            5655 699863  333  988664  37789999999999998764

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.65  E-value=8e-06  Score=75.29  Aligned_cols=317  Identities=12%  Similarity=0.116  Sum_probs=164.2

Q ss_pred             eeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----Cccc----HHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           39 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGL----AAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        39 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      ++.|.|    ++ ++|+.+.+-+.+  ++.+.+.|+|     .+|.    .++...++++    .|.++.  |-.+  .-
T Consensus        80 iG~GyY----~~-~~P~vI~rnile--~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL----TGm~VA--NASm--~D  144 (450)
T COG0403          80 IGAGYY----DT-YTPPVILRNILE--NPEWYTAYTPYQPEISQGRLEALFEFQTLVADL----TGLDVA--NASM--LD  144 (450)
T ss_pred             ccCccc----CC-cCcHHHHHHhhc--CccccccCCCCchhhhhHHHHHHHHHHHHHHHH----hCCCcc--cchh--hh
Confidence            577777    33 346666644433  2345566766     2232    2334444444    344433  2223  46


Q ss_pred             ChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhh----CCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEE
Q 015283          110 SGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL  184 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~i  184 (410)
                      ++|.+-+.+....+.-. +..+++++.-+|+.+.+.++.    .|.+++.++.   +    |++++++. ..  ..+..+
T Consensus       145 eaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~---~----d~~~l~~~-~~--~~~~gv  214 (450)
T COG0403         145 EATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA---D----DLDDLESA-DD--GDVFGV  214 (450)
T ss_pred             hHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc---c----hhhhhhhc-cc--cCeEEE
Confidence            67777777743333333 358999999999999887773    3444444443   1    66777776 32  245555


Q ss_pred             EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc---ccccC
Q 015283          185 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN---LGLYA  261 (410)
Q Consensus       185 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~---~~~~G  261 (410)
                      ++   ++|...-....+++++.+.++++|.++++=.==..++          +.....+.+-+|++++....   +|..|
T Consensus       215 ~v---QyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~----------LL~pPGe~GADIvvG~~QrfGvPmgfGG  281 (450)
T COG0403         215 LV---QYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALG----------LLKPPGEFGADIVVGSAQRFGVPMGFGG  281 (450)
T ss_pred             EE---ecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhh----------ccCCccccCCceEEecCcccCCCcCCCC
Confidence            54   4554332346779999999999988766421101111          11111244567777776553   45556


Q ss_pred             CCcceEEEEeCCchhHHHHHH--------------------HHHhhccC--cccC-CChhHHHHH-HHHhCChhhHHHHH
Q 015283          262 ERIGAMNVVCSSSDLAARVKS--------------------QLKRLARP--MYSN-PPVHGARIV-ANVVGNPALFDEWK  317 (410)
Q Consensus       262 ~r~G~l~~~~~~~~~~~~~~~--------------------~~~~~~~~--~~~~-~~~~~~~~a-~~~l~~~~~~~~~~  317 (410)
                      -..||..+   .++...++-.                    .-++.++.  .+|| ++..+..+. +.+..  .+.  -.
T Consensus       282 Phag~fA~---~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~--~~h--Gp  354 (450)
T COG0403         282 PHAGYFAV---KDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYA--VYH--GP  354 (450)
T ss_pred             cceeeeeE---hHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHH--HHh--Ch
Confidence            66778644   4443222110                    00111111  2232 112111111 11110  000  13


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceee--ecCCCHHHHHHhhh---cCcEEEcC--CCeEEecC-
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS--FTGLNKAQSDNMTN---KWHVYMTK--DGRISLAG-  389 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~---~~gi~v~~--~gRis~~~-  389 (410)
                      +.++++.++..++..++.++|+ +.+.  .+++..  ..+|-  .+.+..+....+++   ..|+-++.  ..++.++. 
T Consensus       355 ~GLk~iA~r~~~~a~~la~~L~-~~~~--g~~~~~--~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~t  429 (450)
T COG0403         355 QGLKEIAERIHRLAAYLAAGLK-EIGA--GVELVF--DHFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDADTVLIALT  429 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-hcCC--ceEecc--ccceeeEEEecchhHHHHHHHHHHhcCCceeeecCCceEEEee
Confidence            5578999999999999999998 7762  122221  24442  22333233333333   23555543  22444442 


Q ss_pred             --CCcccHHHHHHHHHHH
Q 015283          390 --LSLAKCEYLADAIIDS  405 (410)
Q Consensus       390 --~~~~~i~~~~~~l~~~  405 (410)
                        .++++++.+++.+...
T Consensus       430 Et~t~~~i~~l~~~~~~~  447 (450)
T COG0403         430 ETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             cccCHHHHHHHHHHHhhh
Confidence              2567888888777654

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.65  E-value=4.8e-07  Score=79.08  Aligned_cols=195  Identities=18%  Similarity=0.212  Sum_probs=124.2

Q ss_pred             cHHHHHHHHHhhccC-C---CccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           54 LDVVKKAENLMLERG-E---NKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~-~---~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      ..+|.+++++.--.. +   ...|+ ..-|.+-|.+-.|+.+..       +..++=++..+||+|+..+  ++..++||
T Consensus        37 q~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~a-------E~a~VRpq~isGTHAI~~a--Lfg~LRpg  107 (416)
T COG4100          37 QKKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGA-------EAALVRPQIISGTHAIACA--LFGILRPG  107 (416)
T ss_pred             HHHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhcc-------ccceeeeeeecchhHHHHH--HHhccCCC
Confidence            356666665543221 1   12332 123444555555555422       2344446678999999998  77889999


Q ss_pred             CEEEEcC-CCCcchhhh----------hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC---
Q 015283          129 AKVLISS-PTWGNHKNI----------FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG---  194 (410)
Q Consensus       129 d~Vl~~~-p~y~~~~~~----------~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG---  194 (410)
                      |+.+... .-|....+.          +...|...+.+|+  ..++++|++.++..++.   +++++.+   +-.+|   
T Consensus       108 Dell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~L--t~~gkiD~~~v~~~i~~---~tkli~I---QRS~GY~~  179 (416)
T COG4100         108 DELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPL--TADGKIDIQAVKTAISD---RTKLIGI---QRSKGYAW  179 (416)
T ss_pred             CeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeeccc--ccCCcccHHHHHHhcCc---cceEEEE---EeccCcCC
Confidence            9988654 334433332          3345666667777  34678999999999986   6776663   34444   


Q ss_pred             -CCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC-C-cceEEE
Q 015283          195 -IDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-R-IGAMNV  269 (410)
Q Consensus       195 -~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r-~G~l~~  269 (410)
                       -.++.+++++++++.++  .++++++|++|..|... .++...         ..++..+|+-|.-| .|+ . -||+  
T Consensus       180 RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-~EPt~v---------GaDliAGSLIKNpG-GgiaktGGYi--  246 (416)
T COG4100         180 RPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-KEPTHV---------GADLIAGSLIKNPG-GGIAKTGGYI--  246 (416)
T ss_pred             CCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-cCcccc---------chhhhccceeeCCC-Cceeecccee--
Confidence             34689999999999986  58999999999999854 222222         34677889999755 232 1 1674  


Q ss_pred             EeCCchhHHH
Q 015283          270 VCSSSDLAAR  279 (410)
Q Consensus       270 ~~~~~~~~~~  279 (410)
                       ++.++++++
T Consensus       247 -aGk~~~ve~  255 (416)
T COG4100         247 -AGKAELVEA  255 (416)
T ss_pred             -echHHHHHh
Confidence             346675554

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.64  E-value=2.9e-06  Score=87.52  Aligned_cols=308  Identities=13%  Similarity=0.133  Sum_probs=161.5

Q ss_pred             eeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccH----HHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           40 GVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLA----AFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        40 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~----~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      +.|.|    ++ ..|+.+.+.+.+.  .++.+.|+|     .+|..    ++++.++++    .|.+  ..|..+  ..+
T Consensus        70 g~G~y----~~-~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eL----tGm~--~aNaSl--~d~  134 (939)
T TIGR00461        70 GMGYY----GT-ILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDL----TGLP--VANASL--LDE  134 (939)
T ss_pred             CCCcC----CC-cCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHH----HCCC--hhhhhc--cch
Confidence            56666    32 2367777555442  233355554     23433    444555555    3332  345555  677


Q ss_pred             hhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhh----hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283          111 GTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL  185 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii  185 (410)
                      +|.+.+.+....+.-. ++++|++++-.|+.+...++    ..|.+++.++          ++++++.+     .+..++
T Consensus       135 atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~-----~~~~v~  199 (939)
T TIGR00461       135 GTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV-----DVFGCL  199 (939)
T ss_pred             hhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC-----CEEEEE
Confidence            7877776633222222 34899999999998886665    5566665553          34454433     244555


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc----cC
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL----YA  261 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G  261 (410)
                      +.+| |-+|.   .+++++|+++++++|.+++++.--..+..-   .+       ..+.+-+|++++ +|.||.    .|
T Consensus       200 ~q~P-n~~G~---ied~~~i~~~~h~~gal~~~~ad~~al~ll---~~-------Pge~GaDi~vg~-~q~fg~p~g~GG  264 (939)
T TIGR00461       200 LQYP-ATDGS---ILDYKQLIDALHSHKSLVSVAADLMALTLL---TP-------PGHYGADIVLGS-SQRFGVPMGYGG  264 (939)
T ss_pred             EECC-CCCeE---EecHHHHHHHHHHcCCEEEEEechHHhCCc---CC-------HHHcCCcEEeeC-CCccCCCCCCCC
Confidence            4444 45688   457899999999999999985443333311   10       122234555544 444433    34


Q ss_pred             CCcceEEEEeCCchhHHHHHHHHH--------------------hhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283          262 ERIGAMNVVCSSSDLAARVKSQLK--------------------RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME  321 (410)
Q Consensus       262 ~r~G~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~  321 (410)
                      -..|++.+   .+++.+++-..+-                    +.++....+++.+...++.....---..-+-.+.++
T Consensus       265 P~aG~~a~---~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~  341 (939)
T TIGR00461       265 PHAAFFAV---KDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLK  341 (939)
T ss_pred             Cceeeeee---cHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHH
Confidence            44677643   4443332211110                    111111111122211111110000000000134567


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee--eecCC---CHH-HHHHhhhcCcEEEcCC--C--eEEecC-C
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGL---NKA-QSDNMTNKWHVYMTKD--G--RISLAG-L  390 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~--~~~~~---~~~-~~~~ll~~~gi~v~~~--g--Ris~~~-~  390 (410)
                      ++.++...+..++.+.|. +.|+    +...+  .+|  +.+.+   +.+ ..+++++ .||.+...  +  ++|+.- .
T Consensus       342 ~iA~~~~~~a~~l~~~L~-~~G~----~~~~~--~fF~~~~v~~~~~~~~~i~~~~~~-~gi~l~~~~~~~i~~s~~E~~  413 (939)
T TIGR00461       342 NIARRIHSLTSILANGLE-NDPH----ELINK--TWFDTLTVKVGNGISSELLKAAEE-FNINLRAVDTTTVGIALDETT  413 (939)
T ss_pred             HHHHHHHHHHHHHHHHHH-hCCC----cccCC--CccceEEEEeCCCCHHHHHHHHHH-CCCeeeecCCCEEEEEeecCC
Confidence            888899999999999999 8873    43322  334  11222   334 4555655 69987643  2  666553 3


Q ss_pred             CcccHHHHHHHHH
Q 015283          391 SLAKCEYLADAII  403 (410)
Q Consensus       391 ~~~~i~~~~~~l~  403 (410)
                      |+++++.+++.+.
T Consensus       414 t~~di~~l~~~~~  426 (939)
T TIGR00461       414 TKADVENLLKVFD  426 (939)
T ss_pred             CHHHHHHHHHHhc
Confidence            7889999999884

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.58  E-value=2.8e-06  Score=80.30  Aligned_cols=252  Identities=14%  Similarity=0.120  Sum_probs=121.5

Q ss_pred             cCChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhh----hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283          108 GLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF  182 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~  182 (410)
                      -.+++..-+.+....+... ..++|+++...++.+...++    ..|.+++.++..+  +...|        .   +.+.
T Consensus       133 yd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~--~~~~d--------~---~~~a  199 (429)
T PF02347_consen  133 YDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDE--DGTTD--------D---DDTA  199 (429)
T ss_dssp             SSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBT--TCSB---------S---TTEE
T ss_pred             CChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccc--cCCcc--------c---cCeE
Confidence            4566766666543344333 34699999999999887444    5677777777632  22233        2   4677


Q ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc---
Q 015283          183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL---  259 (410)
Q Consensus       183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~---  259 (410)
                      .+++.+|+ -.|.   .+++++|+++++++|.++++ .+ -.....       .+.. ..+.+-+|++++ +|.||.   
T Consensus       200 ~v~vq~Pn-~~G~---~ed~~~i~~~~h~~gal~~~-~a-d~~aL~-------~l~~-Pge~GADI~vg~-~Q~fg~p~~  264 (429)
T PF02347_consen  200 AVMVQNPN-TFGV---FEDIKEIADIAHAAGALVIV-GA-DPNALG-------GLKS-PGEYGADIVVGE-HQTFGIPMG  264 (429)
T ss_dssp             EEEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CG-GCCGCC-------TC---GGGGT-SEEEEC-CTTTT---C
T ss_pred             EEEeecCC-CCce---EeeHHHHHHHHHHcCCEEEE-ec-CHHHHh-------CcCC-hhhcCccEEeeC-CCCCcccCC
Confidence            77766665 4577   56699999999999998876 44 222221       1111 122234555666 777744   


Q ss_pred             -cCCCcceEEEEeCCchhHHHHHHHHH---------------------hhcc-CcccC-CChhHH---HHHHHHhCChhh
Q 015283          260 -YAERIGAMNVVCSSSDLAARVKSQLK---------------------RLAR-PMYSN-PPVHGA---RIVANVVGNPAL  312 (410)
Q Consensus       260 -~G~r~G~l~~~~~~~~~~~~~~~~~~---------------------~~~~-~~~~~-~~~~~~---~~a~~~l~~~~~  312 (410)
                       .|-..|++.+   .+++..++-.++-                     +..+ ..+++ ++..+.   .++..+.--+  
T Consensus       265 ~GGP~~G~~a~---~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G--  339 (429)
T PF02347_consen  265 FGGPGAGFFAV---REDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLG--  339 (429)
T ss_dssp             CC-S--EEEEE----GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHH--
T ss_pred             CCCCCeeeEEE---hhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhC--
Confidence             3555677643   5554333221110                     0001 11221 111111   2222221111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec--CCCHHHHHHhhhc---CcEEEcCC--CeE
Q 015283          313 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GLNKAQSDNMTNK---WHVYMTKD--GRI  385 (410)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~---~gi~v~~~--gRi  385 (410)
                          .+.+++..++...+..++.+.|+ +...   ..+.  ...+|-++  ........+++++   .|+....-  +.+
T Consensus       340 ----~~GL~~iA~~~~~~A~yl~~~L~-~~~~---~~~~--~~~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~~~~~~~~  409 (429)
T PF02347_consen  340 ----PEGLREIAERIHLNAHYLAERLK-KIYG---LPFD--NPFFFEFVVVFSKDKEVEELLKRGIEGGLNLRYPDDGAL  409 (429)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHC-CTTB---ECSS--SSSBSSEEEEESS-HHHHHHHHTT----EEEGGG-SSEE
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHH-HhcC---cccC--CCCceeeeeecCCcHHHHHHHHHHHhcCCCccccCCCeE
Confidence                46678999999999999999998 7521   2222  22333221  2222333334432   46554322  244


Q ss_pred             EecC---CCcccHHHHHHHH
Q 015283          386 SLAG---LSLAKCEYLADAI  402 (410)
Q Consensus       386 s~~~---~~~~~i~~~~~~l  402 (410)
                      .++.   .++++|+.+++.+
T Consensus       410 li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  410 LICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             EEE--TT--HHHHHHHHH--
T ss_pred             EEEccCCCCHHHHHHHHhcC
Confidence            4442   3667788777653

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.57  E-value=2.3e-06  Score=78.87  Aligned_cols=146  Identities=14%  Similarity=0.034  Sum_probs=85.0

Q ss_pred             CCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHH
Q 015283          127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEK  204 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~  204 (410)
                      .++.|+.+.-..-.-...++.+|.+++.||... ++....|.+.+++.+++.+....+.+++++   +++.....| +++
T Consensus       100 ~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvlttt---scfapr~~D~i~~  176 (389)
T PF05889_consen  100 KAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTT---SCFAPRLPDDIEE  176 (389)
T ss_dssp             T--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEES---STTTTB----HHH
T ss_pred             CCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEec---CccCCCCCccHHH
Confidence            678888877544333345667899999998643 344456788888888765445455554433   333333444 999


Q ss_pred             HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH
Q 015283          205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                      |+++|++||+..++..||.--..    .-...+......+.-.+++.|.-|.|-.| .  |-.++.+.++..+..+.+
T Consensus       177 IakiC~~~~IPhlvNnAYgvQ~~----~~~~~i~~a~~~GRvda~vqS~dkNF~VP-v--Ggai~As~~~~~i~~vs~  247 (389)
T PF05889_consen  177 IAKICKEYDIPHLVNNAYGVQSS----KCMHLIQQAWRVGRVDAFVQSTDKNFMVP-V--GGAIMASFDPSGILAVSK  247 (389)
T ss_dssp             HHHHHHHHT--EEEEGTTTTT-H----HHHHHHHHHHHHSTCSEEEEEHHHHHCEE-S--SHEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHcCCceEEccchhhhHH----HHHHHHHHHHhcCCcceeeeecCCCEEec-C--CCcEEEecCHHHHHHHHH
Confidence            99999999999999999864221    00112222333445667899999999533 2  333335667776555544

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=98.39  E-value=1e-05  Score=72.55  Aligned_cols=211  Identities=11%  Similarity=0.087  Sum_probs=119.5

Q ss_pred             ChhhHHHHHhcC--CC-CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH-
Q 015283          166 DFEGMIADIKAA--PG-GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-  240 (410)
Q Consensus       166 d~~~l~~~i~~~--~~-~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-  240 (410)
                      .+++++++|.+.  ++ ..+.+++...+...|-. .|++-.+.|.++|++|++.+|+||+..+.+..   .+.|....+ 
T Consensus       254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaT---Gk~WaHehw~  330 (484)
T KOG1405|consen  254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGAT---GKFWAHEHWN  330 (484)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCcc---CceeeehhcC
Confidence            356677777553  22 33444444556666644 47888999999999999999999998877643   345544433 


Q ss_pred             hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH--HHHHhCChhhHHHHHH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI--VANVVGNPALFDEWKA  318 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~l~~~~~~~~~~~  318 (410)
                      ++...+++   +|||-|-..    ||- .   +++    ++..-...++++|.+-|.-...+  +...+.++        
T Consensus       331 l~~PpD~v---TFSKK~q~g----Gff-h---~~~----frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~--------  387 (484)
T KOG1405|consen  331 LDSPPDVV---TFSKKFQTG----GFF-H---DEE----FRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKRE--------  387 (484)
T ss_pred             CCCCccce---ehhhhhhcC----ccc-c---Ccc----cCCCchHHHhhhhcCChHHHHHHHHHHHHHhHH--------
Confidence            22333555   799998644    442 1   444    32211122344676544433222  23333333        


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCC--CCCcccccCCcceeeecCC-C---HHHHHHhhhcCcEEEcCCC----eE--E
Q 015283          319 EMEMMAGRIKNVRQKLFDSLSAKDKS--GKDWSFILRQIGMFSFTGL-N---KAQSDNMTNKWHVYMTKDG----RI--S  386 (410)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~l~~~~g~--~~~~~~~~~~~~~~~~~~~-~---~~~~~~ll~~~gi~v~~~g----Ri--s  386 (410)
                         ...+..++..+.|.++|. ++..  ++.+.-.... |.|.-.++ +   .+.+...++-.||.+-.+|    |+  +
T Consensus       388 ---~Ll~n~~~vG~~l~~gL~-~Lq~~~p~~~~~~RGr-GTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPs  462 (484)
T KOG1405|consen  388 ---DLLNNVAHVGKALLKGLL-ELQAKYPGKINNLRGR-GTFIAWDCPSGSIRDKLILIARLNGVNLGGCGDKSIRFRPS  462 (484)
T ss_pred             ---HHHHHHHHHHHHHHHHHH-HHHHhCchhhhccccc-ceEEEEeCCChHHHHHHHHHHHHcCceecccccceeeeccc
Confidence               233444555556666555 4421  1222223333 44533344 2   3344444455799988887    55  4


Q ss_pred             ecCCCcccHHHHHHHHHHHhhh
Q 015283          387 LAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       387 ~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +.. .+...+-+++++.++++.
T Consensus       463 Lvf-~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  463 LVF-RKHHADIFLDIFDKILAG  483 (484)
T ss_pred             eee-hhhhHHHHHHHHHHHhcc
Confidence            433 777889999999998865

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.38  E-value=2.8e-07  Score=84.16  Aligned_cols=209  Identities=18%  Similarity=0.168  Sum_probs=39.5

Q ss_pred             cCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH-HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283           46 TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK-VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER  124 (410)
Q Consensus        46 ~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~-aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~  124 (410)
                      ++-|-.++++++.+++.+.........|.-..|-.--|. .+.+++....|    .+.-++  +++...|+.++   ++.
T Consensus        11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltg----AeaA~V--vNnnaAAv~L~---l~~   81 (367)
T PF03841_consen   11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTG----AEAALV--VNNNAAAVLLA---LNT   81 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccc--ccccccccccc---ccc
Confidence            344556667888888877654433334432222111111 11222222222    244444  56666666664   455


Q ss_pred             hCCCCEEEEcCC---CCc---chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC--CCC
Q 015283          125 YFPGAKVLISSP---TWG---NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT--GID  196 (410)
Q Consensus       125 ~~~gd~Vl~~~p---~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt--G~~  196 (410)
                      +.+|.+|+++..   .++   ...++++..|+++++|-..+    .-.++++++.|++   +|.+++-.+++|-.  |+.
T Consensus        82 la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e---~Ta~ll~Vh~Sn~~i~GFt  154 (367)
T PF03841_consen   82 LAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITE---NTAALLKVHTSNFRIQGFT  154 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc----ccccccccccccc---ccccccccccccccccccc
Confidence            667888888763   222   24567788999999986632    2357788888886   77777766666663  442


Q ss_pred             CCHHHHHHHHHHHHHcCCcccccccCCC-------CCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          197 PTPEQWEKIADVIQEKNHIPFFDVAYQG-------FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~Deay~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      -.. .++++++++++|++++|+|-. ++       ++..    +.+.+..+.. ..-+++++|=.|.+|  |--.|.+++
T Consensus       155 ~~~-~~~el~~la~~~~lp~i~Dlg-sG~l~dl~~~gl~----~Ep~v~~~~~-~GaDlV~fSGdKlLG--GPQaGiI~G  225 (367)
T PF03841_consen  155 GEV-SLEELAELAKEHGLPVIVDLG-SGLLVDLSPYGLP----DEPTVQEYLA-AGADLVTFSGDKLLG--GPQAGIIVG  225 (367)
T ss_dssp             -------HHHHHHHHHT--EEEE-T-THHHHHHHTT--------------CCC-CT-SEEEEETTSSSS--S-S-EEEEE
T ss_pred             ccc-cHHHHHHHHhhcCCcEEEECC-CCCCcCcccccCc----cccHHHHHhh-cCCCEEEEECCCcCC--CCCeEEEEe
Confidence            222 478888889999999999998 41       1211    1123323332 346788889999987  445688655


Q ss_pred             EeCCchhHHHHHH
Q 015283          270 VCSSSDLAARVKS  282 (410)
Q Consensus       270 ~~~~~~~~~~~~~  282 (410)
                         .+++++++++
T Consensus       226 ---kk~lI~~lk~  235 (367)
T PF03841_consen  226 ---KKELIEKLKK  235 (367)
T ss_dssp             ---EHHHHHHHHH
T ss_pred             ---CHHHHHHHhh
Confidence               8898888765

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.05  E-value=0.00035  Score=64.55  Aligned_cols=150  Identities=14%  Similarity=0.038  Sum_probs=90.3

Q ss_pred             cCChhhHHHHHHHHHHHhC-CC----------CEEEE-cCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHH
Q 015283          108 GLSGTGSLRLAAALIERYF-PG----------AKVLI-SSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~-~g----------d~Vl~-~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~  172 (410)
                      .+||+-++.-+..+.+.-. |+          +-|+. ++-++.+....+..+|.   .++-|++  ...+++++++|++
T Consensus       165 ~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~  242 (510)
T KOG0629|consen  165 APGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKMIPDDLEK  242 (510)
T ss_pred             cCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecc--cccCccchHHHHH
Confidence            5777766665544443211 33          34444 44577777777777773   5666666  4567899999999


Q ss_pred             HHhcCCCC---cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          173 DIKAAPGG---SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       173 ~i~~~~~~---~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      .|...+.+   +.++-.+.-....|.   -+++..++++|++|++|+.+|.||.+-..-  ....-.  .+.....-.-+
T Consensus       243 kile~k~kg~~Pf~vnaTaGTTV~GA---FDdL~~iadiC~k~~lWmHvDAAwGGglLm--S~k~R~--kl~Giera~Sv  315 (510)
T KOG0629|consen  243 KILEAKAKGGVPFFVNATAGTTVLGA---FDDLNGIADICEKHKLWMHVDAAWGGGLLM--SRKHRH--KLTGIERANSV  315 (510)
T ss_pred             HHHHHHhcCCCCeEEEecCCceeeec---cCcHHHHHHHHHhcCEEEEeeccccccccc--ChhhHh--hccCccccCce
Confidence            98764333   333332222333354   778999999999999999999998773321  111111  22222222345


Q ss_pred             EecccccccccCCCcceE
Q 015283          250 AQSYSKNLGLYAERIGAM  267 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l  267 (410)
                      .++.+|.+|. .+-.+..
T Consensus       316 twnpHK~~ga-plqCsa~  332 (510)
T KOG0629|consen  316 TWNPHKLMGA-PLQCSAF  332 (510)
T ss_pred             eecHHHhhcC-cchhhHH
Confidence            5678888884 4555554

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=97.97  E-value=0.0006  Score=62.13  Aligned_cols=168  Identities=21%  Similarity=0.183  Sum_probs=97.6

Q ss_pred             CcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH-H-------H
Q 015283          214 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ-L-------K  285 (410)
Q Consensus       214 ~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~-~-------~  285 (410)
                      .++|.|.. ++....+  .|..         .-.++-.|.=|.+|..|  ++.+++   ++++++++... +       .
T Consensus       171 ~~~v~D~S-S~ilsr~--iDvs---------k~dviyagaQKnlGpaG--ltvvIv---r~~~l~r~~~~~~P~if~y~~  233 (365)
T COG1932         171 GLLVADAS-SAILSRP--IDVS---------KYDVIYAGAQKNLGPAG--LTVVIV---RPDLLERAESYTLPSIFDYLT  233 (365)
T ss_pred             ceEEEecc-cHHhcCC--CChh---------HcceEEEehhhccCccc--eEEEEE---cHHHHhcccccCCchHhhchh
Confidence            77888888 4443221  1111         13455678899999888  566654   77777765442 1       1


Q ss_pred             h-hccCcccCCChhHHHHHHH---HhC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-cccccCCcceee
Q 015283          286 R-LARPMYSNPPVHGARIVAN---VVG-NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFS  359 (410)
Q Consensus       286 ~-~~~~~~~~~~~~~~~~a~~---~l~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~  359 (410)
                      . ...+++.+||..+...+..   ++. .+.        ++.+.++.+++.+.|.+.+. +-+.-.. ... ...+-+-+
T Consensus       234 ~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG--------l~~~~~rn~~ka~~LY~~id-~s~fy~~~v~~-~~RS~mnV  303 (365)
T COG1932         234 HADNGSMYNTPPTFAWYLLGLVFKWLKSQGG--------LEALEARNQAKAQLLYDWID-KSDFYRNLVAK-ANRSRMNV  303 (365)
T ss_pred             hhccCCccCCcHHHHHHHHHHHHHHHHHcCC--------HHHHHHHHHHHHHHHHHHHH-hCCccccccch-hhccceeE
Confidence            1 1223444666665554422   222 222        46788888999999999887 5553111 111 11111122


Q ss_pred             ecC-----CCHHHHHHhhhcCcEEEcCC-----C-eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          360 FTG-----LNKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       360 ~~~-----~~~~~~~~ll~~~gi~v~~~-----g-Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+.     ++..++.++.+ +|+....|     | |+++.+ ++.++++.+++-++++.++.
T Consensus       304 ~f~~~~~~ld~~fv~eae~-~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~~  364 (365)
T COG1932         304 TFTLVDAELDKGFVAEAEA-AGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEETY  364 (365)
T ss_pred             EEEcCcHHHHHHHHHHHHH-cCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence            222     23445555555 57766554     4 999665 68999999999999887653

>PRK12566 glycine dehydrogenase; Provisional

Probab=97.97  E-value=0.0013  Score=68.18  Aligned_cols=307  Identities=12%  Similarity=0.064  Sum_probs=150.3

Q ss_pred             eeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCC-----ccc----HHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           38 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-----EGL----AAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        38 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----~g~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      =++.|.+    ++ ++|..+.+.+.+.  ..+.+.|+|-     +|.    -++...++++    .|.++.  |-.+  -
T Consensus        83 fiG~G~y----~~-~~P~vi~~~i~~~--~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~L----tGm~va--NASl--~  147 (954)
T PRK12566         83 LIGMGYH----GT-VTPTVILRNVLEN--PGWYTAYTPYQPEIAQGRLEALLNFQQMTIDL----TGLDLA--NASL--L  147 (954)
T ss_pred             ccccccc----CC-cCcHHHHHHHHhC--chhhhcCCCCCchhhhHHHHHHHHHHHHHHHH----hCchhh--hhhh--c
Confidence            4566766    33 2355554544442  2444666552     243    3444445554    333322  2222  3


Q ss_pred             CChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283          109 LSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG  187 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~  187 (410)
                      -++|.+-+.+....+..+ +..+|++++-.++.+...++.+- +...+++.        .+++++.+..   ....+++-
T Consensus       148 D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~-~~~g~~i~--------~~~~~~~~~~---~~~~v~vq  215 (954)
T PRK12566        148 DEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRA-EGFGFELV--------VDAVDNLAAH---AVFGALLQ  215 (954)
T ss_pred             cchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhh-hcCCcEEE--------EcchhhcCCC---CEEEEEEE
Confidence            466766665532222222 24689999999999887776321 11111210        1333333332   45566544


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec---ccccccccCCCc
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS---YSKNLGLYAERI  264 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S---~sK~~~~~G~r~  264 (410)
                      +|+ -.|.   .+++++|+++++++|.++| +.+. .+..        .+..-..+.+-+|++++   |+=-+|..|--.
T Consensus       216 ~P~-~~G~---i~d~~~i~~~~h~~gal~~-~~~d-~laL--------~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~a  281 (954)
T PRK12566        216 YPD-THGE---IRDLRPLIDQLHGQQALAC-VAAD-LLSL--------LVLTPPGELGADVVLGSTQRFGVPMGYGGPHA  281 (954)
T ss_pred             CCC-CceE---EccHHHHHHHHHHcCCEEE-EEeC-HHHH--------hCCCChhhcCCcEEeeCCCcCCCCCCCCCCCe
Confidence            443 4577   4678899999999998755 4441 1111        00011123345666653   344445556667


Q ss_pred             ceEEEEeCCchhHHHHHHHH--------------------HhhccC--cccC-CChhHHHH---HHHHhCChhhHHHHHH
Q 015283          265 GAMNVVCSSSDLAARVKSQL--------------------KRLARP--MYSN-PPVHGARI---VANVVGNPALFDEWKA  318 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~--------------------~~~~~~--~~~~-~~~~~~~~---a~~~l~~~~~~~~~~~  318 (410)
                      |++.+   .++...++-.++                    .+.++.  .+++ +...+..+   +.++.-.+      .+
T Consensus       282 g~~a~---~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~G------p~  352 (954)
T PRK12566        282 AYFAC---RDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHG------PE  352 (954)
T ss_pred             eeeee---hHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhC------hH
Confidence            88643   444333221100                    111111  1222 11111111   11111111      34


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeee--cCC--CH-HHHHHhhhcCcEEEc--CCCeEEecC--
Q 015283          319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--TGL--NK-AQSDNMTNKWHVYMT--KDGRISLAG--  389 (410)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--~~~--~~-~~~~~ll~~~gi~v~--~~gRis~~~--  389 (410)
                      .++++.++...+..++.+.|. +.|+    +...  ..+|-.  +.+  .. +...+.++ .||-++  ..++++++-  
T Consensus       353 Gl~~ia~~~~~~a~~l~~~l~-~~g~----~~~~--~~fF~~~~v~~~~~~~~~~~~a~~-~~~n~r~~~~~~~~~s~de  424 (954)
T PRK12566        353 GLKRIAQRVHRLTAILAAGLE-AKGI----KRLN--RHFFDTLTLEVGGAQAAIIESAEA-ARINLRILGRGRLGVSLDE  424 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcCC----cccc--CCccceEEEEccCCHHHHHHHHHH-CCCeeEEeCCCeEEEEeCC
Confidence            567888899999999999999 8773    3321  144421  222  23 33444444 466554  344555442  


Q ss_pred             -CCcccHHHHHHHH
Q 015283          390 -LSLAKCEYLADAI  402 (410)
Q Consensus       390 -~~~~~i~~~~~~l  402 (410)
                       .+.+++..+++.+
T Consensus       425 ~~~~~~~~~~~~~f  438 (954)
T PRK12566        425 TCDEATVARLFDIF  438 (954)
T ss_pred             CCCHHHHHHHHHHh
Confidence             3667777777776

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=97.75  E-value=0.00084  Score=62.74  Aligned_cols=90  Identities=17%  Similarity=0.097  Sum_probs=65.1

Q ss_pred             EcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283          133 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVI  209 (410)
Q Consensus       133 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~  209 (410)
                      .++-.+.+....+...|.+.+.++.  +.++.++.+.|.+++++.   +-.+.+++ .+  --|...-+-+++.+|..+|
T Consensus       187 ~SDqahssveka~~i~~VklR~l~t--d~n~~mr~~~L~~AIe~D~arGlIPf~v~-at--~GTT~~ca~D~l~elg~Vc  261 (511)
T KOG0628|consen  187 CSDQAHSSVEKACLIAGVKLRALPT--DENFGMRGDTLRKAIEEDIARGLIPFFVC-AT--LGTTSSCAFDELEELGPVC  261 (511)
T ss_pred             ecCcccchHHHhHhhcceeEEEeec--ccCcCCCHHHHHHHHHHHHhCCCccEEEE-Ee--ecCccccccccHHHhcchh
Confidence            4556667777777788888888887  348999999999888762   22233333 22  2222223467899999999


Q ss_pred             HHcCCcccccccCCCCCC
Q 015283          210 QEKNHIPFFDVAYQGFAS  227 (410)
Q Consensus       210 ~~~~~~li~Deay~~~~~  227 (410)
                      +++|+|+.+|.+|.+..+
T Consensus       262 ~~~glWLHVDAAYAGsa~  279 (511)
T KOG0628|consen  262 REEGLWLHVDAAYAGSAF  279 (511)
T ss_pred             hhcCEEEEeehhhccccc
Confidence            999999999999997664

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=96.76  E-value=0.043  Score=47.85  Aligned_cols=107  Identities=19%  Similarity=0.113  Sum_probs=67.4

Q ss_pred             hhCCCCccce-eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHHcCCcccccccC
Q 015283          146 NDARVPWSEY-RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG--IDPTPEQWEKIADVIQEKNHIPFFDVAY  222 (410)
Q Consensus       146 ~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG--~~~~~~~l~~i~~~~~~~~~~li~Deay  222 (410)
                      ...|.+++.+ +..+.+.-.-|++.+++.+.+.++...+-+.    ..|.  ..-+++.+++|+.+|..|++.=++..+|
T Consensus       121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~----sttscfapr~pd~leaiaaica~~diphivnnay  196 (432)
T KOG3843|consen  121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIH----STTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY  196 (432)
T ss_pred             HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEe----ecccccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence            3578877766 3444454566888888888875554444332    2222  2234678999999999999999999997


Q ss_pred             CCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          223 QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      .--...    ....+.....-+.-+.++.|+-|.|-.|
T Consensus       197 glqsee----~i~~iaa~~~~grida~vqsldknf~vp  230 (432)
T KOG3843|consen  197 GLQSEE----CIHKIAAAAECGRIDAFVQSLDKNFMVP  230 (432)
T ss_pred             ccchHH----HHHHHHHHhhhccHHHHHHHhhhcceee
Confidence            643311    1112222222334556778999998755

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=96.15  E-value=0.047  Score=53.57  Aligned_cols=144  Identities=15%  Similarity=0.145  Sum_probs=96.2

Q ss_pred             CccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--CCCC----EEEEcCCCCcc
Q 015283           70 NKEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPGA----KVLISSPTWGN  140 (410)
Q Consensus        70 ~~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~~gd----~Vl~~~p~y~~  140 (410)
                      ++.|.|   .+|+.++-+.+-+++..-.|    -+++.+-+-+|+++ -..-.+..+.+  ..|+    --++|-..++.
T Consensus       568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~G-EYaGL~~IRaY~~~kge~hRnvClIPvSAHGT  642 (1001)
T KOG2040|consen  568 IHPFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQG-EYAGLRVIRAYLESKGEGHRNVCLIPVSAHGT  642 (1001)
T ss_pred             CCCCCchHHHhhHHHHHHHHHHHhheeec----ccceeecCCCCccc-chhhHHHHHHHHHhccCCcceeEEEeecccCC
Confidence            366766   34777777777777655444    35666633344433 22221223332  1342    44567778888


Q ss_pred             hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccc
Q 015283          141 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV  220 (410)
Q Consensus       141 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De  220 (410)
                      ....+..+|++++.|.+  ..++.+|..+|.+..+++.++-..++++-|+. .|+.  .+.+++++++.++||--+..|.
T Consensus       643 NPASA~MagmkvvpV~~--~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDG  717 (1001)
T KOG2040|consen  643 NPASAAMAGMKVVPVGC--DANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDG  717 (1001)
T ss_pred             ChhhHHhcCCEEEEeec--cCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecC
Confidence            88888899999999987  57788999999998888766666666554432 2442  4558999999999999999999


Q ss_pred             cCC
Q 015283          221 AYQ  223 (410)
Q Consensus       221 ay~  223 (410)
                      +-.
T Consensus       718 ANM  720 (1001)
T KOG2040|consen  718 ANM  720 (1001)
T ss_pred             CCc
Confidence            843

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=95.91  E-value=1.2  Score=40.00  Aligned_cols=117  Identities=20%  Similarity=0.086  Sum_probs=78.2

Q ss_pred             CCceEEEecCChhhHHHHHHHHHHHhCCC---CEEEEcCCCCcch----hhhhhhCCCCccc--eeeecC-CCcccChhh
Q 015283          100 EQRVATVQGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNH----KNIFNDARVPWSE--YRYYDP-KTVGLDFEG  169 (410)
Q Consensus       100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~~g---d~Vl~~~p~y~~~----~~~~~~~g~~~~~--v~~~~~-~~~~~d~~~  169 (410)
                      .++|.+  .++=|-.++.+  ++..+.|-   -+|+...-.|++-    .+.++..|..+..  +...+. ....+..++
T Consensus       128 e~Evav--mNsLTvNlh~L--l~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteD  203 (465)
T KOG3846|consen  128 ENEVAV--MNSLTVNLHSL--LISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTED  203 (465)
T ss_pred             chhhhh--HhhhhhHHHHH--HHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHH
Confidence            566776  55556666665  44456554   3788877676654    4455566765432  222222 234677899


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ  223 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~  223 (410)
                      +.+.|.++++...+++++..+.-||+.++   +.+|-..-+..|+++=.|-++.
T Consensus       204 ILd~IEkngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA  254 (465)
T KOG3846|consen  204 ILDTIEKNGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA  254 (465)
T ss_pred             HHHHHHhcCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh
Confidence            99999988778888889999999999665   5556544556799988898843

>PLN02672 methionine S-methyltransferase

Probab=95.54  E-value=0.2  Score=53.55  Aligned_cols=202  Identities=14%  Similarity=0.077  Sum_probs=115.9

Q ss_pred             HHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCc-
Q 015283           62 NLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWG-  139 (410)
Q Consensus        62 ~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~-  139 (410)
                      ...+.......|.|+.|...+|..|+.++...+++++++++|++  .++-..|++.+.++... +.--|.-+.   .|- 
T Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  485 (1082)
T PLN02672        411 ASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAVAIENALRLFSPRLAIVDEHLT---RWLP  485 (1082)
T ss_pred             HHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHHHHHHHHHhhChHHHhhhhhhh---ccCC
Confidence            34444444477889999999999999999999999999999998  78888999887544321 100021111   111 


Q ss_pred             -chhhhhhhCCCC-----ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015283          140 -NHKNIFNDARVP-----WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN  213 (410)
Q Consensus       140 -~~~~~~~~~g~~-----~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~  213 (410)
                       .|...+...|..     -..+.+.+ ..-  .-+.+.+++++-  ++.+++.+...   +-..+...++.|...+++-|
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  557 (1082)
T PLN02672        486 KKWLTSLAIENATSDSKSDDVITVIE-APR--QSDLVIELIKKL--KPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIG  557 (1082)
T ss_pred             HHHHhHhhhhcccccCccCCeEEEEe-CCC--cchHHHHHHHhC--CCeEEEEeccc---hhhhhHHHHHHHHHHHHhhC
Confidence             122222222110     01111111 000  113556666663  44555543332   22334667889999999999


Q ss_pred             CcccccccCC-CCCCCCCCCchhHhHHHhhc--CCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283          214 HIPFFDVAYQ-GFASGSLDNDASSVRLFATR--GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       214 ~~li~Deay~-~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      ..++.|..-+ .+..  .......+..+...  ..+..++.++-|.--.+-+-+.++  +.-++.+...+
T Consensus       558 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  623 (1082)
T PLN02672        558 ARLFLDISDHLELSS--LPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFV--ISENEAVLKAL  623 (1082)
T ss_pred             cEEEEehhhheeecc--CCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEE--ecCcHHHHHHH
Confidence            9999999832 2222  11222233333332  235666778888766688888887  44455543333

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=94.49  E-value=1  Score=40.09  Aligned_cols=170  Identities=18%  Similarity=0.213  Sum_probs=91.7

Q ss_pred             HHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH------
Q 015283          210 QEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ------  283 (410)
Q Consensus       210 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~------  283 (410)
                      ..++.++|.|-. +.|...+.+.           ....++..+.-|.+|+.|+-+-.  +   .++++......      
T Consensus       172 ~~~~~vlVaDmS-SnflSrpvDv-----------sk~gvi~aGAQKN~G~aG~Tvvi--v---r~dllg~~~~~tP~v~d  234 (370)
T KOG2790|consen  172 DPKGAVLVADMS-SNFLSRPVDV-----------SKFGVIFAGAQKNVGPAGVTVVI--V---RKDLLGNALDITPSVLD  234 (370)
T ss_pred             CCCCceEEEecc-cchhcCCccc-----------hhcceEEeccccccCccccEEEE--E---ehhhhcccccCCccccc
Confidence            346888899988 7766543221           12356677889999988863222  2   44533322110      


Q ss_pred             HHhh-c-cCcccCCChhHHH----HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccc--ccCC
Q 015283          284 LKRL-A-RPMYSNPPVHGAR----IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSF--ILRQ  354 (410)
Q Consensus       284 ~~~~-~-~~~~~~~~~~~~~----~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~--~~~~  354 (410)
                      ++.. . .+.+.++|..+..    ....+++.+.+        ..+.+.-.++.+.+.+.+. .- |+   +.+  .+..
T Consensus       235 yk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl--------~a~e~~n~~KskllYd~iD-~s~gf---y~cpVe~~~  302 (370)
T KOG2790|consen  235 YKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGL--------AAMEKLNQEKSKLLYDAID-NSNGF---YRCPVEPSV  302 (370)
T ss_pred             eeeeccccccccCCCeeeeeehhhHHHHHHhcccH--------HHHHHHHHHHHHHHHHHHH-hcCCe---EEcccchhh
Confidence            0000 0 1122234433222    23445555543        5666777888888999887 43 42   221  1111


Q ss_pred             ccee-ee--cC---CCHHHHHHhhhcCcEEEcCC-----C-eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          355 IGMF-SF--TG---LNKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       355 ~~~~-~~--~~---~~~~~~~~ll~~~gi~v~~~-----g-Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+.. +-  ++   ++.+++.+..++ ++.-..|     | |-|+.+ ++-++++.++.-+++..+..
T Consensus       303 RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~h  369 (370)
T KOG2790|consen  303 RSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQKKH  369 (370)
T ss_pred             hhhcccceeecchHHHHHHHHHHHHh-hhhccccccccccchhhhhccccHHHHHHHHHHHHHHHHhc
Confidence            1111 11  11   234555665554 5544444     3 888775 58899999999998876643

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=91.01  E-value=19  Score=36.30  Aligned_cols=79  Identities=15%  Similarity=0.232  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec----CCCHH-HHHHhhhc-CcEEEcCCCeEEec---
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT----GLNKA-QSDNMTNK-WHVYMTKDGRISLA---  388 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~----~~~~~-~~~~ll~~-~gi~v~~~gRis~~---  388 (410)
                      +.++++.+++......|..+|+ ..|    .++...  .+|=.+    +.+.+ ...+..++ .++.....+-|+++   
T Consensus       391 ~gL~~IArrvh~~T~~l~~~l~-~ag----hel~~k--~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDE  463 (1001)
T KOG2040|consen  391 HGLKEIARRVHNLTLILAEGLK-NAG----HELQHK--PFFDTLKIRCGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDE  463 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-hcc----hhhccc--cccceEEEEecCcHHHHHHHHHhhcCceEEeecCceEEeecc
Confidence            4467888899999999999998 776    232211  245222    33333 45555543 34445555655544   


Q ss_pred             CCCcccHHHHHHHHH
Q 015283          389 GLSLAKCEYLADAII  403 (410)
Q Consensus       389 ~~~~~~i~~~~~~l~  403 (410)
                      +.+++|++.++..+.
T Consensus       464 Tv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  464 TVTEKDVDDLLWVFN  478 (1001)
T ss_pred             cccHHHHHHHHHHHc
Confidence            246677887776654

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=85.15  E-value=36  Score=32.52  Aligned_cols=158  Identities=10%  Similarity=0.093  Sum_probs=92.1

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV  150 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~  150 (410)
                      +.|......+++++++.+.+.+ +|......+.    +.|.+.....+..-++.+..-+..++...+|......+....-
T Consensus        47 NdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~----i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~  121 (388)
T COG0156          47 NDYLGLASHPELIEAAKAAIRR-YGVGAGGSRL----ISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLK  121 (388)
T ss_pred             cCcccccCCHHHHHHHHHHHHH-hCCCCCCcCc----ccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcC
Confidence            6788888889999999888644 4554444554    4555555555555666666557889999999888777764332


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc---CCcccccccCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK---NHIPFFDVAYQGFAS  227 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~---~~~li~Deay~~~~~  227 (410)
                      + ..+-+.|+    ++-..+.+-++-.  +...+..  .||      +.++|+++.+-+++.   ..+|+.|.+|+.-+.
T Consensus       122 ~-~dli~~D~----lnHASiidG~rls--~a~~~~f--~Hn------D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGd  186 (388)
T COG0156         122 K-GDLIFSDE----LNHASIIDGIRLS--RAEVRRF--KHN------DLDHLEALLEEARENGARRKLIVTEGVFSMDGD  186 (388)
T ss_pred             C-CcEEEEec----hhhhhHHHHHHhC--CCcEEEe--cCC------CHHHHHHHHHhhhccCCCceEEEEeccccCCCC
Confidence            2 11212222    2334454444331  3333333  332      256777776665544   489999999986553


Q ss_pred             CCCCCchhHhHHHhhcCCcEEEEe
Q 015283          228 GSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      -   .+...+..+.+.++..+++.
T Consensus       187 i---ApL~~l~~L~~ky~a~L~VD  207 (388)
T COG0156         187 I---APLPELVELAEKYGALLYVD  207 (388)
T ss_pred             c---CCHHHHHHHHHHhCcEEEEE
Confidence            1   12223334445555555543

>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]

Probab=81.06  E-value=1.9  Score=43.46  Aligned_cols=37  Identities=16%  Similarity=0.282  Sum_probs=32.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG  228 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~  228 (410)
                      |++..|.   +++++++++-|++.||-||+|-||..|...
T Consensus       206 p~sryGt---Pedfk~fVD~aH~~GIgViLD~V~~HF~~d  242 (628)
T COG0296         206 PTSRYGT---PEDFKALVDAAHQAGIGVILDWVPNHFPPD  242 (628)
T ss_pred             ccccCCC---HHHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence            4455555   999999999999999999999999998853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	410
3pd6_A	401	Crystal Structure Of Mouse Mitochondrial Aspartate		1e-121
3hlm_A	401	Crystal Structure Of Mouse Mitochondrial Aspartate		1e-120
7aat_A	401	X-Ray Structure Refinement And Comparison Of Three		1e-119
1aka_A	401	Structural Basis For The Catalytic Activity Of Aspa		1e-118
2cst_A	411	Crystal Structure Of The Closed Form Of Chicken Cyt		1e-103
1aat_A	411	Oxoglutarate-Induced Conformational Changes In Cyto		1e-102
1ajs_A	412	Refinement And Comparison Of The Crystal Structures		1e-102
1ajr_A	412	Refinement And Comparison Of The Crystal Structures		1e-101
3ii0_A	422	Crystal Structure Of Human Glutamate Oxaloacetate T		1e-100
4eu1_A	409	Structure Of A Mitochondrial Aspartate Aminotransfe		2e-96
1asl_A	396	Crystal Structures Of Escherichia Coli Aspartate Am		2e-96
4f5m_A	406	Wild-type E. Coli Aspartate Aminotransferase: A Tem		4e-96
1ix6_A	396	Aspartate Aminotransferase Active Site Mutant V39f		4e-96
1asf_A	396	The Structural Basis For The Reduced Activity Of Th		6e-96
1aia_A	396	Structural Basis For The Catalytic Activity Of Aspa		9e-96
2aat_A	396	2.8-Angstroms-Resolution Crystal Structure Of An Ac		1e-95
2q7w_A	396	Structural Studies Reveals The Inactivation Of E. C		1e-95
1asb_A	396	The Structural Basis For The Reduced Activity Of Th		2e-95
1aam_A	396	The Structural Basis For The Altered Substrate Spec		2e-95
3aat_A	396	Activity And Structure Of The Active-Site Mutants R		2e-95
1ix8_A	396	Aspartate Aminotransferase Active Site Mutant V39fN		3e-95
1b4x_A	396	Aspartate Aminotransferase From E. Coli, C191s Muta		4e-95
1g4v_A	396	Aspartate Aminotransferase Active Site Mutant N194a		5e-95
1ari_A	396	Aspartate Aminotransferase, W140h Mutant, Maleate C		5e-95
1qir_A	396	Aspartate Aminotransferase From Escherichia Coli, C		6e-95
1qis_A	396	Aspartate Aminotransferase From Escherichia Coli, C		7e-95
1qit_A	396	Aspartate Aminotransferase From Escherichia Coli, C		8e-95
1bqa_A	396	Aspartate Aminotransferase P195a Mutant Length = 39		9e-95
1arh_A	396	Aspartate Aminotransferase, Y225rR386A MUTANT Lengt		1e-94
1g7w_A	396	Aspartate Aminotransferase Active Site Mutant N194a		2e-94
1g4x_A	396	Aspartate Aminotransferase Active Site Mutant N194a		2e-94
1ahy_A	396	Aspartate Aminotransferase Hexamutant Length = 396		4e-94
3zzj_A	396	Structure Of An Engineered Aspartate Aminotransfera		6e-94
1bqd_A	396	Aspartate Aminotransferase P138aP195A DOUBLE MUTANT		7e-94
2d61_A	396	Aspartate Aminotransferase Mutant Ma With Maleic Ac		7e-94
2d5y_A	396	Aspartate Aminotransferase Mutant Mc With Isovaleri		7e-94
1g7x_A	396	Aspartate Aminotransferase Active Site Mutant N194a		1e-93
1toe_A	396	Unliganded Structure Of Hexamutant + A293d Mutant O		2e-93
4f5f_A	406	Structure Of Aspartate Aminotransferase Conversion		2e-93
2d66_A	396	Aspartate Aminotransferase Mutant Mab Length = 396		8e-93
4f5j_A	406	Rational Design And Directed Evolution For Conversi		2e-92
4f5i_A	406	Substrate Specificity Conversion Of E. Coli Pyridox		2e-92
1czc_A	396	Aspartate Aminotransferase Mutant Atb17139S142N WIT		3e-92
4f5h_A	406	Intercoversion Of Substrate Specificity: E. Coli As		5e-92
4f5g_A	406	Rational Design And Directed Evolution Of E. Coli A		1e-91
4f5k_A	406	Substrate Specificity Conversion Of Aspartate Amino		1e-91
1toj_A	396	Hydrocinnamic Acid-Bound Structure Of Srhept Mutant		1e-91
1tog_A	396	Hydrocinnamic Acid-Bound Structure Of Srhept + A293		2e-91
4h51_A	420	Crystal Structure Of A Putative Aspartate Aminotran		3e-91
1yoo_A	396	Aspartate Aminotransferase Mutant Atb17 With Isoval		4e-91
2d64_A	396	Aspartate Aminotransferase Mutant Mabc With Isovale		6e-91
1yaa_A	412	Aspartate Aminotransferase From Saccharomyces Cerev		6e-89
3meb_A	448	Structure Of Cytoplasmic Aspartate Aminotransferase		3e-87
4f4e_A	420	Crystal Structure Of Aromatic-Amino-Acid Aminotrans		1e-85
4eff_A	420	Crystal Structure Of Aromatic-Amino-Acid Aminotrans		1e-85
3tat_A	397	Tyrosine Aminotransferase From E. Coli Length = 397		1e-85
3fsl_A	397	Crystal Structure Of Tyrosine Aminotransferase Trip		6e-85
3uak_A	406	Crystal Structure Of De Novo Designed Cysteine Este		5e-79
1ay4_A	394	Aromatic Amino Acid Aminotransferase Without Substr		4e-76
3k7y_A	405	Aspartate Aminotransferase Of Plasmodium Falciparum		6e-56
3rq1_A	418	Crystal Structure Of Aminotransferase Class I And I		2e-16
4emy_A	413	Crystal Structure Of Aminotransferase From Anaeroco		2e-06

>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate Aminotransferase, A Newly Identified Kynurenine Aminotransferase-Iv Length = 401

Iteration: 1
 Score =  431 bits (1109), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/391 (53%), Positives = 274/391 (70%), Gaps = 2/391 (0%)
Query: 13  VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE 72
           V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KE
Sbjct: 7   VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKE 66
Query: 73  YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-V 131
           YLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V
Sbjct: 67  YLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDV 126
Query: 132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191
            +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHN
Sbjct: 127 FLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHN 186
Query: 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251
           PTG+DP PEQW++IA V+++KN   FFD+AYQGFASG  D DA +VR F  +G+ + + Q
Sbjct: 187 PTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQ 246
Query: 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311
           SY+KN+GLY ER+GA  VVC  ++ A RV+SQLK L RP+YSNPP++GARI A ++ +P 
Sbjct: 247 SYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPD 306
Query: 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNM 371
           L  +W  E++ MA RI ++R +L  +L  K+ S  +W  I  QIGMF FTGL   Q + +
Sbjct: 307 LRKQWLQEVKGMADRIISMRTQLVSNLK-KEGSSHNWQHITDQIGMFCFTGLKPEQVERL 365
Query: 372 TNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           T ++ VYMTKDGRIS+AG++     YLA AI
Sbjct: 366 TKEFSVYMTKDGRISVAGVTSGNVGYLAHAI 396

>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate AminotransferaseKYNURENINE AMINOTRANSFERASE IV Length = 401

Iteration: 1
 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/391 (53%), Positives = 273/391 (69%), Gaps = 2/391 (0%)
Query: 13  VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE 72
           V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KE
Sbjct: 7   VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKE 66
Query: 73  YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-V 131
           YLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V
Sbjct: 67  YLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDV 126
Query: 132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191
            +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHN
Sbjct: 127 FLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHN 186
Query: 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251
           PTG+DP PEQW++IA V+++KN   FFD+AYQGFASG  D DA +VR F  +G+ + + Q
Sbjct: 187 PTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQ 246
Query: 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311
           SY+ N+GLY ER+GA  VVC  ++ A RV+SQLK L RP+YSNPP++GARI A ++ +P 
Sbjct: 247 SYAXNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPD 306
Query: 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNM 371
           L  +W  E++ MA RI ++R +L  +L  K+ S  +W  I  QIGMF FTGL   Q + +
Sbjct: 307 LRKQWLQEVKGMADRIISMRTQLVSNLK-KEGSSHNWQHITDQIGMFCFTGLKPEQVERL 365
Query: 372 TNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           T ++ VYMTKDGRIS+AG++     YLA AI
Sbjct: 366 TKEFSVYMTKDGRISVAGVTSGNVGYLAHAI 396

>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms Of Mitochondrial Aspartate Aminotransferase Length = 401

Iteration: 1
 Score =  425 bits (1092), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/396 (51%), Positives = 279/396 (70%), Gaps = 2/396 (0%)
Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL+ V+KAE ++  +
Sbjct: 2   SWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK 61
Query: 68  GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 127
             +KEYLPI GLA F + +AEL  G ++   K  R  TVQG+SGTGSLR+ A  ++R+F 
Sbjct: 62  KMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFK 121
Query: 128 GAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
            ++ V +  P+WGNH  IF DA +    YRYYDPKT  LDF G + DI   P  S ILLH
Sbjct: 122 FSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLH 181
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DP  EQW+++A V++++N + +FD+AYQGFASG ++ DA ++R F  +G++
Sbjct: 182 ACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGID 241
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           ++++QSY+KN+GLY ER GA  V+C  ++ A RV+SQLK L RPMYSNPP++GARI + +
Sbjct: 242 VVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLI 301
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           +  P L  EW  E++ MA RI ++R +L  +L  K+ S  +W  I  QIGMF FTGL   
Sbjct: 302 LNTPELRKEWLVEVKGMADRIISMRTQLVSNLK-KEGSSHNWQHITDQIGMFCFTGLKPE 360
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           Q + +T ++ +YMTKDGRIS+AG++ +   YLA AI
Sbjct: 361 QVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAI 396

>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate Aminotransferase K258h Lacking Its Pyridoxal-5'-Phosphate-Binding Lysine Residue Length = 401

Iteration: 1
 Score =  422 bits (1086), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 278/396 (70%), Gaps = 2/396 (0%)
Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL+ V+KAE ++  +
Sbjct: 2   SWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK 61
Query: 68  GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 127
             +KEYLPI GLA F + +AEL  G ++   K  R  TVQG+SGTGSLR+ A  ++R+F 
Sbjct: 62  KMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFK 121
Query: 128 GAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
            ++ V +  P+WGNH  IF DA +    YRYYDPKT  LDF G + DI   P  S ILLH
Sbjct: 122 FSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLH 181
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DP  EQW+++A V++++N + +FD+AYQGFASG ++ DA ++R F  +G++
Sbjct: 182 ACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGID 241
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           ++++QSY+ N+GLY ER GA  V+C  ++ A RV+SQLK L RPMYSNPP++GARI + +
Sbjct: 242 VVLSQSYAHNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLI 301
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           +  P L  EW  E++ MA RI ++R +L  +L  K+ S  +W  I  QIGMF FTGL   
Sbjct: 302 LNTPELRKEWLVEVKGMADRIISMRTQLVSNLK-KEGSSHNWQHITDQIGMFCFTGLKPE 360
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           Q + +T ++ +YMTKDGRIS+AG++ +   YLA AI
Sbjct: 361 QVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAI 396

>pdb|2CST|A Chain A, Crystal Structure Of The Closed Form Of Chicken Cytosolic Aspartate Aminotransferase At 1.9 Angstroms Resolution Length = 411

Iteration: 1
 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 186/402 (46%), Positives = 255/402 (63%), Gaps = 8/402 (1%)
Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S F  V  APP  +  ++  F+ D D +K+NLGVGAYRT+E QP+VL VV+K E L+   
Sbjct: 3   SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGD 62
Query: 68  GE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
           G  N EYLPI GL  F    + +  G D+  + ++RV +VQGL GTG+LR+ A  + R++
Sbjct: 63  GSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWY 122
Query: 127 PG-----AKVLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
            G       V +SSPTW NH ++F DA       YRY+D    GLD +G++ D++ AP  
Sbjct: 123 NGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKAPEF 182
Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           S  +LH CAHNPTG DPTP++W++IA V++ +   PFFD AYQGFASGSLD DA +VR F
Sbjct: 183 SIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQGFASGSLDKDAWAVRYF 242
Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
            + G EL  AQS+SKN GLY ER+G ++VV    D   RV SQ++++ R  +SNPP  GA
Sbjct: 243 VSEGFELFCAQSFSKNFGLYNERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGA 302
Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVA  + +P LF EWK  ++ MA R+  +R +L   L +    G  W+ I  QIGMFSF
Sbjct: 303 RIVATTLTSPQLFAEWKDNVKTMADRVLLMRSELRSRLESLGTPGT-WNHITDQIGMFSF 361
Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           TGLN  Q + M  + H+Y+   GRI++ GL+    +Y+A +I
Sbjct: 362 TGLNPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSI 403

>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic Aspartate Aminotransferase Length = 411

Iteration: 1
 Score =  369 bits (948), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/402 (45%), Positives = 256/402 (63%), Gaps = 8/402 (1%)
Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S F  V  APP  +  ++  F+ D D +K+NLGVGAYRT+E QP+VL VV+K E L+   
Sbjct: 3   SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGN 62
Query: 68  GE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
           G  N EYLPI GL  F    + +  G D+  + ++RV +VQGL GTG+LR+ A  + R++
Sbjct: 63  GSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWY 122
Query: 127 PG-----AKVLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
            G       V +SSPTW NH ++F DA       YRY+D    GLD +G+++D++ AP  
Sbjct: 123 NGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLSDMEKAPEF 182
Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           S  +LH CAHNPTG DPTP++W++IA V++ +   PFFD AYQGFASG+L+ DA +VR F
Sbjct: 183 SIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQGFASGNLEKDAWAVRYF 242
Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
            + G EL  AQS+SKN GLY ER+G ++VV    D   RV SQ++++ R  +SNPP  GA
Sbjct: 243 VSEGFELFCAQSFSKNFGLYNERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGA 302
Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVA  + +P LF EWK  ++ MA R+  +R +L   L +    G  W+ I  QIGMFSF
Sbjct: 303 RIVATTLTSPQLFAEWKDNVKTMADRVLLMRSELRSRLESLGTPGT-WNHITDQIGMFSF 361
Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           TGLN  Q + M  + H+Y+   GRI++ GL+    +Y+A +I
Sbjct: 362 TGLNPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSI 403

>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig Cytosolic Aspartate Aminotransferase And Its Complex With 2-Methylaspartate Length = 412

Iteration: 1
 Score =  367 bits (941), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/402 (45%), Positives = 250/402 (62%), Gaps = 8/402 (1%)
Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S F  V  A P  +  +   F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +   
Sbjct: 4   SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN 63
Query: 68  GE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
              N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++
Sbjct: 64  SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY 123
Query: 127 PGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
            G       V +SSPTW NH  +F  A       YRY+D +  GLD +G ++D++ AP  
Sbjct: 124 NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183
Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           S  +LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQGFASG+L+ DA ++R F
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243
Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
            + G EL  AQS+SKN GLY ER+G + VV    D   RV SQ++++ R  +SNPP  GA
Sbjct: 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303
Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVA  + +P LF EW   ++ MA RI ++R +L   L A    G  W+ I  QIGMFSF
Sbjct: 304 RIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGT-WNHITDQIGMFSF 362
Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           TGLN  Q + + N+ H+Y+   GRI++ GL+    +Y+A +I
Sbjct: 363 TGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSI 404

>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig Cytosolic Aspartate Aminotransferase And Its Complex With 2-Methylaspartate Length = 412

Iteration: 1
 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 183/402 (45%), Positives = 249/402 (61%), Gaps = 8/402 (1%)
Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S F  V  A P  +  +   F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +   
Sbjct: 4   SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN 63
Query: 68  GE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
              N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++
Sbjct: 64  SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY 123
Query: 127 PGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
            G       V +SSPTW NH  +F  A       YRY+D +  GLD +G ++D++ AP  
Sbjct: 124 NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183
Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           S  +LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQGFASG+L+ DA ++R F
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243
Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
            + G EL  AQS+S N GLY ER+G + VV    D   RV SQ++++ R  +SNPP  GA
Sbjct: 244 VSEGFELFCAQSFSXNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303
Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVA  + +P LF EW   ++ MA RI ++R +L   L A    G  W+ I  QIGMFSF
Sbjct: 304 RIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGT-WNHITDQIGMFSF 362
Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           TGLN  Q + + N+ H+Y+   GRI++ GL+    +Y+A +I
Sbjct: 363 TGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSI 404

>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate Transaminase 1 (Got1) Length = 422

Iteration: 1
 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/392 (45%), Positives = 250/392 (63%), Gaps = 8/392 (2%)
Query: 18  PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPI 76
           P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI
Sbjct: 3   PVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPI 62
Query: 77  EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----V 131
            GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V
Sbjct: 63  LGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPV 122
Query: 132 LISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190
            +SSPTW NH  +F+ A       YRY+D +  GLD +G + D++ AP  S ++LH CAH
Sbjct: 123 YVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAH 182
Query: 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250
           NPTGIDPTPEQW++IA V++ +   PFFD AYQGFASG+L+ DA ++R F + G E   A
Sbjct: 183 NPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCA 242
Query: 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 310
           QS+SKN GLY ER+G + VV    +   +V SQ++++ R  +SNPP  GARIVA+ + NP
Sbjct: 243 QSFSKNFGLYNERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGARIVASTLSNP 302
Query: 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDN 370
            LF+EW   ++ MA RI  +R +L   L A    G  W+ I  QIGMFSFTGLN  Q + 
Sbjct: 303 ELFEEWTGNVKTMADRILTMRSELRARLEALKTPGT-WNHITDQIGMFSFTGLNPKQVEY 361
Query: 371 MTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           + N+ H+Y+   GRI+++GL+    +Y+A +I
Sbjct: 362 LVNEKHIYLLPSGRINVSGLTTKNLDYVATSI 393

>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase From Trypanosoma Brucei Length = 409

Iteration: 1
 Score =  349 bits (895), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 172/399 (43%), Positives = 256/399 (64%), Gaps = 13/399 (3%)
Query: 14  TMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY 73
           +M  PDPILG+ + F+ D  ++K+NL +G YR +  QP+VL+ VK+A       G N +Y
Sbjct: 21  SMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQAT-----LGTNMDY 75
Query: 74  LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 133
            P+ G+A+F +   +L FG   + L++ R+A+ Q L GTG+LR+   L+ R+       I
Sbjct: 76  APVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCN-RI 134
Query: 134 SSPTWG--NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191
             P  G  NH++IF  A +  + Y YYDP T GL+  GM+  +  AP GS IL+H CAHN
Sbjct: 135 YGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHN 194
Query: 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251
           PTG+DPT + W ++ DVI+ +NHIPF D+AYQGFA+G LD DA   R        L+VAQ
Sbjct: 195 PTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQ 254
Query: 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311
           S+S N GLY  R GA+++  +S++ A R+ SQL  L RPMY+NPP++GA +V++++ +P 
Sbjct: 255 SFSXNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQ 314
Query: 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNM 371
           L   WK E++ M+ RI  VR++L   L A   S  DWS I RQ+GM ++TGL + Q + +
Sbjct: 315 LTALWKKELKQMSSRIAEVRKRLVSELKACG-SVHDWSHIERQVGMMAYTGLTREQVELL 373
Query: 372 TNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
            +++H+YMT +GR +++GL+    EY++ AI    HNV+
Sbjct: 374 RSEYHIYMTLNGRAAVSGLNSTNVEYVSQAI----HNVT 408

>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate Aminotransferase In Two Conformations: Comparison Of An Unliganded Open And Two Liganded Closed Forms Length = 396

Iteration: 1
 Score =  348 bits (894), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 175/394 (44%), Positives = 247/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template For The Interconversion Of Substrate Specificity And Activity To Tyrosine Aminotransferase By The Janus Algorithm. Length = 406

Iteration: 1
 Score =  348 bits (892), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 175/397 (44%), Positives = 247/397 (62%), Gaps = 2/397 (0%)
Query: 7   VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 66
           V  FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE
Sbjct: 9   VGTFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLE 68
Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +  
Sbjct: 69  NETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNT 128
Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
              +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L H
Sbjct: 129 SVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 188
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
           GC HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    E
Sbjct: 189 GCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKE 247
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           L+VA SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA +
Sbjct: 248 LIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 307
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + N AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K 
Sbjct: 308 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKE 366
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
           Q   +  ++ VY    GR+++AG++      L +AI+
Sbjct: 367 QVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 403

>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Length = 396

Iteration: 1
 Score =  348 bits (892), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 175/394 (44%), Positives = 247/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  347 bits (891), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 247/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD A+QGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate Aminotransferase K258h Lacking The Pyridoxal-5'-Phosphate Binding Lysine Residue Length = 396

Iteration: 1
 Score =  347 bits (889), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSHNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An Active-Site Mutant Of Aspartate Aminotransferase From Escherichia Coli Length = 396

Iteration: 1
 Score =  346 bits (888), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSANFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli L-Aspartate Aminotransferase (S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta) Via Two Mechanisms At Ph 6.0 Length = 396

Iteration: 1
 Score =  346 bits (888), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The D223a(D222a) Active Site Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  346 bits (887), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P F  AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFAFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity Of The R292d Active Site Mutant Of Aspartate Aminotransferase From E. Coli Length = 396

Iteration: 1
 Score =  345 bits (886), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K      YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIDANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y And R386f Of Escherichia Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  345 bits (885), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    G +++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGFVNVAGMTPDNMAPLCEAIV 393

>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A Length = 396

Iteration: 1
 Score =  345 bits (885), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           H PTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation, With Bound Maleate Length = 396

Iteration: 1
 Score =  345 bits (884), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HG  
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGSC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f Length = 396

Iteration: 1
 Score =  344 bits (883), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           H PTGIDPT EQW+ +A +  EK  +P FD A+QGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex Length = 396

Iteration: 1
 Score =  344 bits (882), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+  NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSHPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y Mutation, With Bound Maleate Length = 396

Iteration: 1
 Score =  344 bits (882), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HG  
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGYC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f Mutation, With Bound Maleate Length = 396

Iteration: 1
 Score =  344 bits (882), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HG  
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGFC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w Mutation, With Bound Maleate Length = 396

Iteration: 1
 Score =  343 bits (881), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HG  
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGWC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant Length = 396

Iteration: 1
 Score =  343 bits (880), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 245/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HN TGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT Length = 396

Iteration: 1
 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 245/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD A QGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFARQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    G +++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGAVNVAGMTPDNMAPLCEAIV 393

>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L Length = 396

Iteration: 1
 Score =  342 bits (878), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 245/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           H PTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    G +++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGLVNVAGMTPDNMAPLCEAIV 393

>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L Length = 396

Iteration: 1
 Score =  342 bits (878), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 245/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           H PTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K      YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant Length = 396

Iteration: 1
 Score =  341 bits (875), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 246/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y  E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +     
Sbjct: 62  TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  340 bits (873), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 244/394 (61%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGQGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD A QGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAQQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K      YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIYANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT Length = 396

Iteration: 1
 Score =  340 bits (873), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 244/394 (61%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+ +W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNASWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HN TGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid Length = 396

Iteration: 1
 Score =  340 bits (873), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 245/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++  +AD    K++LG+G Y  E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid Length = 396

Iteration: 1
 Score =  340 bits (873), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 244/394 (61%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITTAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SF ++Q GMF F GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFTIKQNGMFFFGGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIV 393

>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292LR386L Length = 396

Iteration: 1
 Score =  339 bits (870), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 244/394 (61%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           H PTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K      YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    G +++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGLVNVAGMTPDNMAPLCEAIV 393

>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 245/394 (62%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y  E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +     
Sbjct: 62  TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRDNYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To Tyrosine Aminotransferase: Chimera P1. Length = 406

Iteration: 1
 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 173/397 (43%), Positives = 243/397 (61%), Gaps = 2/397 (0%)
Query: 7   VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 66
           V  FE +T AP DPILG+++ F+AD    K++LGVG Y+ E  +  VL  VKKAE  +LE
Sbjct: 9   VGTFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLE 68
Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               K YL ++GL  F + T ELLFG  ++++ ++R  T Q   G+G+LR+ A  + +  
Sbjct: 69  NETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVGADFLAKNT 128
Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
              +V +S+P+W NHK IFN A +   EY YYD +   LDF+ +I  +  A  G  +L H
Sbjct: 129 SVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 188
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
           GC HNPTGIDPT EQW+ +A +  EK  +P  D AYQGF  G L+ DA  +R FA    E
Sbjct: 189 GCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRG-LEEDAEGLRAFAAMHKE 247
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           L+VA SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA +
Sbjct: 248 LIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 307
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + N AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K 
Sbjct: 308 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKE 366
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
           Q   +  ++ VY    GRI++AG++      L +AI+
Sbjct: 367 QVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAIV 403

>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab Length = 396

Iteration: 1
 Score =  337 bits (864), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 171/394 (43%), Positives = 243/394 (61%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++  +AD    K++LG+G Y  E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P W  HK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of Substrate Specificity From E.coli Aspartate Aminotransferase To Tyrosine Aminotransferase: Mutant P5. Length = 406

Iteration: 1
 Score =  336 bits (861), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 171/397 (43%), Positives = 243/397 (61%), Gaps = 2/397 (0%)
Query: 7   VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 66
           V  FE +T AP DPILG+++ F+AD    K++LGVG Y+ E  +  VL  VKKAE  +LE
Sbjct: 9   VGTFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLE 68
Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               K YL ++GL  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +  
Sbjct: 69  NETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNT 128
Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
              +V +S+P+W NHK IFN A +   EY YYD +   LDF+ +I  +  A  G  +L H
Sbjct: 129 SVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 188
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
           GC HNPTG DPT EQW+ +A +  EK  +P  D+AYQGF  G L+ DA  +R FA    E
Sbjct: 189 GCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKE 247
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           L+VA S S N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA +
Sbjct: 248 LIVASSCSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 307
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + N AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K 
Sbjct: 308 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKE 366
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
           Q   +  ++ VY    GR+++AG++      L +AI+
Sbjct: 367 QVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 403

>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli Pyridoxal-5'-phosphate Dependent Aspartate Aminotransferase To Tyrosine Aminotransferase: Chimera P4. Length = 406

Iteration: 1
 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 171/397 (43%), Positives = 243/397 (61%), Gaps = 2/397 (0%)
Query: 7   VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 66
           V  FE +T AP DPILG+++ F+AD    K++LGVG Y+ E  +  V+  VKKAE  +LE
Sbjct: 9   VGTFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVMTSVKKAEQYLLE 68
Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               K YL I+G+  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +  
Sbjct: 69  NETTKTYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNT 128
Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
              +V +S+PTW NHK IFN A +   EY YYD +   LDF+ +I  +  A  G  +L H
Sbjct: 129 SVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 188
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
           GC HNPTGIDPT EQW+ +A +  EK  +P  D+AYQGF  G L+ DA  +R FA    E
Sbjct: 189 GCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKE 247
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           L+VA S S N  LY ER+GA  +V + S+   R  SQ+K   R  YS+PP HGA +VA +
Sbjct: 248 LIVASSCSXNFSLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATI 307
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + N AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K 
Sbjct: 308 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKE 366
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
           Q   +  ++ VY    GRI++AG++      L +AI+
Sbjct: 367 QVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAIV 403

>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH GLUTARIC ACID Length = 396

Iteration: 1
 Score =  335 bits (858), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 170/394 (43%), Positives = 242/394 (61%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++  +AD    K++LG+G Y  E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVR 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+G   +V + S+   R  SQ+K   R  YS+PP HGA +VA ++GN
Sbjct: 241 ASSYSKNFGLYNERVGTCTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILGN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SF ++Q GMF F GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFTIKQNGMFFFGGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIV 393

>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate Aminotransferase To Tyrosine Aminotransferase: Chimera P3. Length = 406

Iteration: 1
 Score =  334 bits (857), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 169/397 (42%), Positives = 243/397 (61%), Gaps = 2/397 (0%)
Query: 7   VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 66
           V  FE +T AP DPILG+++ F+AD    K++LG+G Y+ E  +  V+  VKKAE  +LE
Sbjct: 9   VGTFENITAAPADPILGLADLFRADERPGKVDLGIGVYKDETGKTPVMTSVKKAEQYLLE 68
Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               K YL ++GL  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +  
Sbjct: 69  NETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNT 128
Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
              +V +S+P+W NHK IFN A +   EY YYD +   LDF+ +I  +  A  G  +L H
Sbjct: 129 SVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 188
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
           GC HNPTG DPT EQW+ +A +  EK  +P  D AYQGF  G L+ DA  +R FA    E
Sbjct: 189 GCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRG-LEEDAEGLRAFAAMHKE 247
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           L+VA SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YS+PP HGA +VA +
Sbjct: 248 LIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATI 307
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + N AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K 
Sbjct: 308 LSNDALRAIWEQELTDMRQRIQRLRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKE 366
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
           Q   +  ++ VY    GR+++AG++      L +AI+
Sbjct: 367 QVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 403

>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate Aminotransferase To Tyrosine Aminotransferase: Mutant P2. Length = 406

Iteration: 1
 Score =  333 bits (854), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 169/397 (42%), Positives = 242/397 (60%), Gaps = 2/397 (0%)
Query: 7   VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 66
           V  FE +T AP DPILG+++ F+AD    K++LGVG Y+ E  +  VL  VKKAE  +LE
Sbjct: 9   VGTFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLE 68
Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               K YL ++GL  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +  
Sbjct: 69  NETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNT 128
Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
              +V +S+P+W NHK IFN A +   EY YYD +   LDF+ +I  +  A  G  +L H
Sbjct: 129 SVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 188
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
           GC HNPTG DPT EQW+ +A +  EK  +P  D+AYQGF  G L+ DA  +R FA    E
Sbjct: 189 GCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKE 247
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           L+VA S S N GLY ER+GA  +V + S+   R   Q+K   R  YSNPP HGA +VA +
Sbjct: 248 LIVASSCSXNFGLYNERVGACTLVAADSETVDRAFGQMKAAIRANYSNPPAHGASVVATI 307
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + N AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SF+++Q GMFSF+GL K 
Sbjct: 308 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFVIKQNGMFSFSGLTKE 366
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
           Q   +  ++ VY    GR+++AG++      L +AI+
Sbjct: 367 QVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 403

>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate Aminotransferase To Tyrosine Aminotransferase By The Janus Algorithm: Chimera P6. Length = 406

Iteration: 1
 Score =  333 bits (853), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/397 (42%), Positives = 241/397 (60%), Gaps = 2/397 (0%)
Query: 7   VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 66
           V  FE +T AP DPILG+++ F+AD    K++LGVG Y+ E  +  V+  VKKAE  +LE
Sbjct: 9   VGTFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVMTSVKKAEQYLLE 68
Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
               K YL ++GL  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +  
Sbjct: 69  NETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNT 128
Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
              +V +S+PTW NHK IFN A +   EY YYD +   LDF+ +I  +  A  G  +L H
Sbjct: 129 SVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 188
Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
           GC HNPTG DPT EQW+ +A +  EK  +P  D+AYQGF  G L+ DA  +R FA    E
Sbjct: 189 GCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKE 247
Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           L+VA S S N  LY ER+GA  +V + S+   R   Q+K   R  YSNPP HGA +VA +
Sbjct: 248 LIVASSCSXNFSLYNERVGACTLVAADSETVDRAFGQMKAAIRANYSNPPAHGASVVATI 307
Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           + N AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K 
Sbjct: 308 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKE 366
Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
           Q   +  ++ VY    GRI++AG++      L +AI+
Sbjct: 367 QVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAIV 403

>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  333 bits (853), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/394 (42%), Positives = 242/394 (61%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T    DPILG+++ F+AD    K++LG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITATTADPILGLADLFRADERPGKIDLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N  LY ER+GA  +V + S+   R   Q+K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSXNFALYNERVGACTLVAADSETVDRAFGQMKAAIRANYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/394 (42%), Positives = 242/394 (61%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T    DPILG+++ F+AD    K++LG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITATTADPILGLADLFRADERPGKIDLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   G+G+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N  LY ER+GA  +V + S+   R   Q+K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSXNFALYNERVGACTLVAADSETVDRAFGQMKAAIRDNYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFIIKQNGMFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIV 393

>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase From Leishmania Major Friedlin Length = 420

Iteration: 1
 Score =  332 bits (850), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 182/413 (44%), Positives = 251/413 (60%), Gaps = 13/413 (3%)
Query: 3   AAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAEN 62
           A     R++ +    PD I  +++   A     K NL +GAYR E+ +PY L VV+KAE 
Sbjct: 14  AMTTAERWQKIQAQAPDVIFDLAKR-AAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQ 72
Query: 63  LMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALI 122
           L+L+   + EYLPI G   F     ++++G  N+V  E  VA VQ LSGTG++ L A L+
Sbjct: 73  LLLDMNLDYEYLPISGYQPFIDEAVKIIYG--NTVELENLVA-VQTLSGTGAVSLGAKLL 129
Query: 123 ERYFPG--AKVLISSPTWGNHKNIFNDARVPW---SEYRYYDPKTVGLDFEGMIADIKAA 177
            R F      + +S PTW NH  +   A   W     Y YYDPKTV L+FEGM  DI AA
Sbjct: 130 TRVFDAETTPIYLSDPTWPNHYGVVKAA--GWKNICTYAYYDPKTVSLNFEGMKKDILAA 187
Query: 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 237
           P GS  +LH CAHNPTG+DP+ EQW +IA ++  K+H  FFD AYQG+ASGSLD DA + 
Sbjct: 188 PDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAA 247
Query: 238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPV 297
           RLFA RG+E+L+AQS+S N+GLY+ER G ++++       A VKS +  L R  Y+ PP 
Sbjct: 248 RLFARRGIEVLLAQSFSXNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPA 307
Query: 298 HGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM 357
           HGAR+   ++ N  L  EW+AE+  MA RI+ +R+ ++D L      G  W  ++ QIGM
Sbjct: 308 HGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPG-SWEHVINQIGM 366
Query: 358 FSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           FSF GL+KAQ +   N  ++++T  GR ++AGL+      LA  I D+  NV+
Sbjct: 367 FSFLGLSKAQCEYCQNH-NIFITVSGRANMAGLTHETALMLAQTINDAVRNVN 418

>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric Acid Length = 396

Iteration: 1
 Score =  331 bits (849), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 169/394 (42%), Positives = 240/394 (60%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++  +AD    K++LG+G Y  E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVR 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P W  HK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+G   +V + S+   R  SQ+K   R  YS+PP HGA +VA ++GN
Sbjct: 241 ASSYSKNFGLYNERVGTCTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILGN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SF ++Q GMF F GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFTIKQNGMFFFGGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIV 393

>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric Acid Length = 396

Iteration: 1
 Score =  330 bits (847), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 169/394 (42%), Positives = 240/394 (60%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++  +AD    K++LG+G Y  E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P W  HK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SF ++Q GMF F GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG-ANRDFSFTIKQNGMFFFGGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG++      L +AI+
Sbjct: 360 RLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIV 393

>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae Cytoplasm Length = 412

Iteration: 1
 Score =  324 bits (830), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 166/405 (40%), Positives = 234/405 (57%), Gaps = 17/405 (4%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERG 68
           F  + + PPD + G+ + +  D    K++LG+GAYR +  +P+VL  VK AE L+  +  
Sbjct: 5   FNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSS 64
Query: 69  ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128
            N EYL I GL +     A+++FG  +  L+E RV +VQ LSGTG+L ++A    ++FP 
Sbjct: 65  YNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPD 124
Query: 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188
             V +S PTW NH  IF +  +  + Y Y+  +T  LD  G +  I+ AP GS  +LH C
Sbjct: 125 KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSC 184
Query: 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-- 246
           AHNPTG+DPT EQW +I D I  KNHI  FD AYQGFA+G LD DA +VRL    G+E  
Sbjct: 185 AHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRL----GVEKL 240
Query: 247 -----LLVAQSYSKNLGLYAERIGAMNVVCS----SSDLAARVKSQLKRLARPMYSNPPV 297
                + V QS++KN G+Y ER+G  ++  +    +  +   V SQL ++ R   SNPP 
Sbjct: 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPA 300
Query: 298 HGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM 357
           +GA+IVA ++  P L ++W  +M  M+ RI  +R  L D L      G +W  I+ Q GM
Sbjct: 301 YGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPG-NWDHIVNQCGM 359
Query: 358 FSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           FSFTGL       +     VY+   GR S+AGL+    EY+A AI
Sbjct: 360 FSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAI 404

>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From Giardia Lamblia Length = 448

Iteration: 1
 Score =  318 bits (815), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 171/420 (40%), Positives = 247/420 (58%), Gaps = 20/420 (4%)
Query: 6   NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML 65
           ++S F G   +PPD IL ++  + ADT+ KK+NLGVGAYR E  +P++L  VK+AE ++ 
Sbjct: 21  SMSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIIS 80
Query: 66  E--RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 123
                 NKEY P+ G   F +    L+FG D+   +E R+A+ Q LSGTGSL +    + 
Sbjct: 81  SDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLH 140
Query: 124 RYFPGAKVLISSPTWGNHKNI----FNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAP 178
            + P A+  + S TW NH  I    FN  +VP+ EY Y      + +DF     DI++AP
Sbjct: 141 LWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAP 200
Query: 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238
             S  L H CAHNP+GID T  QW+++  +++EK HI FFD AYQGFA+GS + DA +VR
Sbjct: 201 EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVR 260
Query: 239 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD--------LAARVKSQLKRLARP 290
           +F   G+E+LVAQS+SKN GLY ERIG ++VV +  +        L+A + S +    R 
Sbjct: 261 MFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRK 320
Query: 291 MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK---- 346
            +S   +HGA IV  +V +  L   +   ++ M+ RI  +R  L  SL+ +   G     
Sbjct: 321 TWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKG 380
Query: 347 DWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTK-DGRISLAGLSLAKCEYLADAIIDS 405
            W  IL  IGMF+FTGL     D +  KW +Y+ K  GR+S+ GL+ + C+Y+A+AI D+
Sbjct: 381 TWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEAIHDA 440

>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase From Burkholderia Pseudomallei Covalently Bound To Pyridoxal Phosphate Length = 420

Iteration: 1
 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 169/397 (42%), Positives = 248/397 (62%), Gaps = 2/397 (0%)
Query: 6   NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML 65
           ++S F  V +AP DPILG++EAF ADT   K+NLGVG Y  E+ +  +L  V+ AE   +
Sbjct: 21  SMSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARV 80
Query: 66  ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 125
           E G  + YLPI+G+AA++    +LL G D+ ++   RV T Q L GTG+L++ A  +   
Sbjct: 81  EAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTL 140
Query: 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 185
            P AKV IS P+W NH+ +F+ A      Y YYD KT G++F+GM+A +     G+ ++L
Sbjct: 141 NPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVL 200
Query: 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245
           H C HNPTG+D    QW ++ +V++ +  +PF D+AYQGF   S++ DA++VRLFA   +
Sbjct: 201 HACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGE-SIEADAAAVRLFAAANL 259
Query: 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305
            + V+ S+S +  LY ER+GA++++  S D AARV SQLKR+ R  YSNPP HG  IVA 
Sbjct: 260 NVFVSSSFSXSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAA 319
Query: 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK 365
           V+ +P L   W  E+  M  RI+ +R  L + L A     +D+SFI  Q GMFS++GL  
Sbjct: 320 VLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIE-RDFSFINAQRGMFSYSGLTS 378
Query: 366 AQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           AQ D +  ++ +Y    GRI +A L+    + +A+AI
Sbjct: 379 AQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAI 415

>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase From Burkholderia Pseudomallei Length = 420

Iteration: 1
 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 170/397 (42%), Positives = 249/397 (62%), Gaps = 2/397 (0%)
Query: 6   NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML 65
           ++S F  V +AP DPILG++EAF ADT   K+NLGVG Y  E+ +  +L  V+ AE   +
Sbjct: 21  SMSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARV 80
Query: 66  ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 125
           E G  + YLPI+G+AA++    +LL G D+ ++   RV T Q L GTG+L++ A  +   
Sbjct: 81  EAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTL 140
Query: 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 185
            P AKV IS P+W NH+ +F+ A      Y YYD KT G++F+GM+A +     G+ ++L
Sbjct: 141 NPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVL 200
Query: 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245
           H C HNPTG+D    QW ++ +V++ +  +PF D+AYQGF   S++ DA++VRLFA   +
Sbjct: 201 HACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGE-SIEADAAAVRLFAAANL 259
Query: 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305
            + V+ S+SK+  LY ER+GA++++  S D AARV SQLKR+ R  YSNPP HG  IVA 
Sbjct: 260 NVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAA 319
Query: 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK 365
           V+ +P L   W  E+  M  RI+ +R  L + L A     +D+SFI  Q GMFS++GL  
Sbjct: 320 VLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIE-RDFSFINAQRGMFSYSGLTS 378
Query: 366 AQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           AQ D +  ++ +Y    GRI +A L+    + +A+AI
Sbjct: 379 AQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAI 415

>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli Length = 397

Iteration: 1
 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 163/394 (41%), Positives = 240/394 (60%), Gaps = 3/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEE-LQPYVLDVVKKAENLMLERG 68
           F+ V     DPIL + E FK D    K+NL +G Y  E+ + P +  V +    L  +  
Sbjct: 2   FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPH 61
Query: 69  ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128
               YLP+EGL  +    A LLFGAD+ VLK+QRVAT+Q L G+G+L++ A  ++RYFP 
Sbjct: 62  GASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE 121
Query: 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188
           + V +S PTW NH  IF  A    S Y +YD  T G+ F  ++A +K  P  S +LLH C
Sbjct: 122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPC 181
Query: 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248
            HNPTG D T +QW+ + ++++ +  IPF D+AYQGF +G ++ DA ++R  A+ G+  L
Sbjct: 182 CHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPAL 240
Query: 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308
           V+ S+SK   LY ER+G ++V+C  ++ A RV  QLK   R  YS+PP  GA++VA V+ 
Sbjct: 241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN 300
Query: 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQS 368
           + AL   W AE+E M  RI  +RQ+L   LS  +   +++ ++L Q GMFS+TGL+ AQ 
Sbjct: 301 DEALKASWLAEVEEMRTRILAMRQELVKVLS-TEMPERNFDYLLNQRGMFSYTGLSAAQV 359
Query: 369 DNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           D +  ++ VY+   GR+ +AGL+ A  + +A A 
Sbjct: 360 DRLREEFGVYLIASGRMCVAGLNTANVQRVAKAF 393

>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple Mutant (P181q, R183g,A321k) From Escherichia Coli At 2.35 A Resolution Length = 397

Iteration: 1
 Score =  311 bits (796), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 162/394 (41%), Positives = 239/394 (60%), Gaps = 3/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEE-LQPYVLDVVKKAENLMLERG 68
           F+ V     DPIL + E FK D    K+NL +G Y  E+ + P +  V +    L  +  
Sbjct: 2   FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPH 61
Query: 69  ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128
               YLP+EGL  +    A LLFGAD+ VLK+QRVAT+Q L G+G+L++ A  ++RYFP 
Sbjct: 62  GASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE 121
Query: 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188
           + V +S PTW NH  IF  A    S Y +YD  T G+ F  ++A +K    GS +LLH C
Sbjct: 122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPC 181
Query: 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248
            HNPTG D T +QW+ + ++++ +  IPF D+AYQGF +G ++ DA ++R  A+ G+  L
Sbjct: 182 CHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPAL 240
Query: 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308
           V+ S+SK   LY ER+G ++V+C  ++ A RV  QLK   R  YS+PP  GA++VA V+ 
Sbjct: 241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN 300
Query: 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQS 368
           + AL   W  E+E M  RI  +RQ+L   LS  +   +++ ++L Q GMFS+TGL+ AQ 
Sbjct: 301 DEALKASWLKEVEEMRTRILAMRQELVKVLST-EMPERNFDYLLNQRGMFSYTGLSAAQV 359
Query: 369 DNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           D +  ++ VY+   GR+ +AGL+ A  + +A A 
Sbjct: 360 DRLREEFGVYLIASGRMCVAGLNTANVQRVAKAF 393

>pdb|3UAK|A Chain A, Crystal Structure Of De Novo Designed Cysteine Esterase Ech14, Northeast Structural Genomics Consortium Target Or54 Length = 406

Iteration: 1
 Score =  291 bits (745), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 161/394 (40%), Positives = 230/394 (58%), Gaps = 2/394 (0%)
Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPI G+++ F+AD    K+NLG+  Y  E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPIYGLADLFRADERPGKINLGLALYYDETGKIPVLTSVKKAEQYLLENET 61
Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   G G+LR+AA  + +     
Sbjct: 62  TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGHGALRVAADFLAKNTSVK 121
Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V + +P+    K++FN A +   EY YYD +   LDF+ +I  +  A  G  +L  GC 
Sbjct: 122 RVWVYNPSSNCSKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFTGCC 181
Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P F   YQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFTFFYQGFARG-LEEDAEGLRAFAAXHKELIV 240
Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY E +GA  +V + S+   R  SQ K   R  YS+PP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNESVGACTLVAADSETVDRAFSQXKAAIRDNYSSPPAHGASVVATILSN 300
Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+     RI+  RQ   ++L  K  + +D+SFI++Q G FSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDXRQRIQRXRQLFVNTLQEKG-ANRDFSFIIKQNGXFSFSGLTKEQVL 359
Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403
            +  ++ VY    GR+++AG +      L +AI+
Sbjct: 360 RLREEFGVYAVASGRVNVAGXTPDNXAPLCEAIV 393

>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate Length = 394

Iteration: 1
 Score =  281 bits (719), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 153/388 (39%), Positives = 218/388 (56%), Gaps = 7/388 (1%)
Query: 18  PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE 77
           PD IL +   F+AD  + K++LGVG Y+       ++  V  AE  MLE    K Y  + 
Sbjct: 10  PDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLS 69
Query: 78  GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPT 137
           G   F K   EL+ G     LK +  AT+  + GTG+LR A  L     P  +V +S PT
Sbjct: 70  GEPEFQKAMGELILG---DGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPT 126
Query: 138 WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP 197
           W NH +I N   +P   YRY+D +T G+DFEGM AD+ AA  G  +LLHGC HNPTG + 
Sbjct: 127 WPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANL 186
Query: 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257
           T +QW +IA ++++   +P  D+AYQGF  G L+ DA+  RL A+R  E+L+A S SKN 
Sbjct: 187 TLDQWAEIASILEKTGALPLIDLAYQGFGDG-LEEDAAGTRLIASRIPEVLIAASCSKNF 245
Query: 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK 317
           G+Y ER G +  +C+ +      +  +  L R  YS PP HGA+IV+ V+  P L  +W 
Sbjct: 246 GIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWM 305
Query: 318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFSFTGLNKAQSDNMTNKWH 376
           AE+E +   +  +R++L   L  +D SG D + F+    GMFS  G    Q   +  ++ 
Sbjct: 306 AELEAVRSGMLRLREQLAGEL--RDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFG 363
Query: 377 VYMTKDGRISLAGLSLAKCEYLADAIID 404
           +YM  D RI++AGL+      LA AII+
Sbjct: 364 IYMVGDSRINIAGLNDNTIPILARAIIE 391

>pdb|3K7Y|A Chain A, Aspartate Aminotransferase Of Plasmodium Falciparum Length = 405

Iteration: 1
 Score =  214 bits (545), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 208/387 (53%), Gaps = 5/387 (1%)
Query: 19  DPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEG 78
           D IL  +  FK DT E+K+NL +G    ++   ++ D V  A+ L+ E  + K YL   G
Sbjct: 14  DNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADKLVTENYKEKPYLLGNG 73
Query: 79  LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW 138
              F+ +T  L+FG ++  ++++++ T+Q + GTG++ +    + +      + +++P +
Sbjct: 74  TEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFL-KMLNVETLYVTNPPY 132
Query: 139 GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 198
            NH N+            ++D   + ++++  + D++  P GS ++L    +NP  ++  
Sbjct: 133 INHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIE 192
Query: 199 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258
            + +++I +++  K H+  FD+AYQGF   +L+ D   +R F  + +   V QS+SKN+ 
Sbjct: 193 EKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMS 252
Query: 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 318
           LY ER GA+++VC + +    V + L  + R  YS+P +H  RI+  ++ N  L   W  
Sbjct: 253 LYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIK 312
Query: 319 EMEMMAGRIKNVRQKLFDSLSAKDKS---GKDWSFILRQIGMFSFTGLNKAQSDNMTNKW 375
           E+  ++ RI N R   F+ L    K      DW+   +Q G+FSF  L    ++++    
Sbjct: 313 ELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEHLKTH- 371
Query: 376 HVYMTKDGRISLAGLSLAKCEYLADAI 402
           H+Y+  +GRI+++G++    +Y+AD I
Sbjct: 372 HIYIINNGRINVSGITKNNVDYIADKI 398

>pdb|3RQ1|A Chain A, Crystal Structure Of Aminotransferase Class I And Ii From Veillonella Parvula Length = 418

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 137/324 (42%), Gaps = 20/324 (6%)
Query: 29  KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88
           K +  E  +N  +GA   EE     L  VK+ E L L   E+  Y PI G+  F     +
Sbjct: 33  KENGRENVVNGTLGAIHDEEGNLVFLKTVKE-EYLSLSDSEHVGYAPIAGIPDFLCAAEK 91
Query: 89  LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFND 147
             FG   +   E  + ++    GTG +     LI  Y  PG +VL +   WG ++ I +D
Sbjct: 92  ECFG---NFRPEGHIRSIATAGGTGGIH---HLIHNYTEPGDEVLTADWYWGAYRVICSD 145
Query: 148 ARVPWSEYRYYDPKTV--GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 205
                  Y  +D         F+  + ++ A      ++ +   +NPTG     + W+ I
Sbjct: 146 TGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSI 205
Query: 206 ADVIQE------KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL--VAQSYSKNL 257
            + +++       N I   DVAY  + SG  D   +    F+    E+L  V  S SK  
Sbjct: 206 LNFLKDLVAIGRNNVIIGIDVAYLDY-SGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF 264
Query: 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK 317
             Y +R+GA   +    ++A       K  +R  +SN      R  AN+V +PA F E++
Sbjct: 265 TXYGQRVGAXIGISDDEEIADEFFEVNKSTSRATWSNICRPAXRTXANIVADPAKFKEYE 324
Query: 318 AEMEMMAGRIKNVRQKLFDSLSAK 341
           AE       I++ R  +F   +A+
Sbjct: 325 AERNCYYQLIRD-RADIFKQEAAQ 347

>pdb|4EMY|A Chain A, Crystal Structure Of Aminotransferase From Anaerococcus Prevotii Dsm 20548. Length = 413

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 26/244 (10%)
Query: 66  ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 125
           +R     Y PIEG   + K+  + LFG       E  ++ +    GTG++R  +A+    
Sbjct: 68  DRSHIASYAPIEGEKDYRKIVIDTLFG---PYKPEGYISAIATPGGTGAIR--SAIFSYL 122
Query: 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDF------EGMIADIKAAP 178
             G  ++     W  ++ I  +    +  + ++ D     +D       EG+    + A 
Sbjct: 123 DEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIAS 182
Query: 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP------FFDVAYQGFASGSLDN 232
                L++   +NPTG   + E+W+++   ++EK            DVAY  FA G  D 
Sbjct: 183 -----LINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFA-GDGDQ 236
Query: 233 DASSVRLFAT--RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP 290
                  F+   R + ++VA S SK+   Y  R GA   + SS ++    ++ L   AR 
Sbjct: 237 QRKFFEKFSNLPRNLFVVVAFSXSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARC 296
Query: 291 MYSN 294
            +SN
Sbjct: 297 NWSN 300

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	410
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	0.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	0.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	0.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	0.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	0.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	0.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	0.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	0.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	0.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	0.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	0.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	0.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	1e-150
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	4e-07
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	3e-06
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	3e-06
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	4e-05
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	5e-05
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	6e-05
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	6e-05
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	2e-04
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	5e-04
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	7e-04
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	9e-04

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A* Length = 420

 Score =  669 bits (1728), Expect = 0.0
 Identities = 169/404 (41%), Positives = 248/404 (61%), Gaps = 2/404 (0%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
                ++S F  V +AP DPILG++EAF ADT   K+NLGVG Y  E+ +  +L  V+ A
Sbjct: 16  TQGPGSMSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDA 75

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
           E   +E G  + YLPI+G+AA++    +LL G D+ ++   RV T Q L GTG+L++ A 
Sbjct: 76  EKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGAD 135

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
            +    P AKV IS P+W NH+ +F+ A      Y YYD KT G++F+GM+A +     G
Sbjct: 136 FLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPG 195

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           + ++LH C HNPTG+D    QW ++ +V++ +  +PF D+AYQGF    ++ DA++VRLF
Sbjct: 196 TIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGES-IEADAAAVRLF 254

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
           A   + + V+ S+SK+  LY ER+GA++++  S D AARV SQLKR+ R  YSNPP HG 
Sbjct: 255 AAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGG 314

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
            IVA V+ +P L   W  E+  M  RI+ +R  L + L A     +D+SFI  Q GMFS+
Sbjct: 315 AIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAA-GIERDFSFINAQRGMFSY 373

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
           +GL  AQ D +  ++ +Y    GRI +A L+    + +A+AI  
Sbjct: 374 SGLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAA 417

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A* Length = 401

 Score =  664 bits (1716), Expect = 0.0
 Identities = 201/398 (50%), Positives = 278/398 (69%), Gaps = 2/398 (0%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL+ V+KAE ++  +
Sbjct: 2   SWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK 61

Query: 68  GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 127
             +KEYLPI GLA F + +AEL  G ++   K  R  TVQG+SGTGSLR+ A  ++R+F 
Sbjct: 62  KMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFK 121

Query: 128 GAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
            ++ V +  P+WGNH  IF DA +    YRYYDPKT  LDF G + DI   P  S ILLH
Sbjct: 122 FSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLH 181

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DP  EQW+++A V++++N + +FD+AYQGFASG ++ DA ++R F  +G++
Sbjct: 182 ACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGID 241

Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           ++++QSY+KN+GLY ER GA  V+C  ++ A RV+SQLK L RPMYSNPP++GARI + +
Sbjct: 242 VVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLI 301

Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           +  P L  EW  E++ MA RI ++R +L  +L  +  S  +W  I  QIGMF FTGL   
Sbjct: 302 LNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE-GSSHNWQHITDQIGMFCFTGLKPE 360

Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
           Q + +T ++ +YMTKDGRIS+AG++ +   YLA AI  
Sbjct: 361 QVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQ 398

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} PDB: 3tat_A* Length = 397

 Score =  656 bits (1694), Expect = 0.0
 Identities = 164/396 (41%), Positives = 239/396 (60%), Gaps = 3/396 (0%)

Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAEN-LMLERG 68
           F+ V     DPIL + E FK D    K+NL +G Y  E+     L  V +AE  L  +  
Sbjct: 2   FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPH 61

Query: 69  ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128
               YLP+EGL  +    A LLFGAD+ VLK+QRVAT+Q L G+G+L++ A  ++RYFP 
Sbjct: 62  GASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE 121

Query: 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188
           + V +S PTW NH  IF  A    S Y +YD  T G+ F  ++A +K    GS +LLH C
Sbjct: 122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPC 181

Query: 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248
            HNPTG D T +QW+ + ++++ +  IPF D+AYQGF +G ++ DA ++R  A+ G+  L
Sbjct: 182 CHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPAL 240

Query: 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308
           V+ S+SK   LY ER+G ++V+C  ++ A RV  QLK   R  YS+PP  GA++VA V+ 
Sbjct: 241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN 300

Query: 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQS 368
           + AL   W  E+E M  RI  +RQ+L   LS +    +++ ++L Q GMFS+TGL+ AQ 
Sbjct: 301 DEALKASWLKEVEEMRTRILAMRQELVKVLSTE-MPERNFDYLLNQRGMFSYTGLSAAQV 359

Query: 369 DNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
           D +  ++ VY+   GR+ +AGL+ A  + +A A   
Sbjct: 360 DRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAA 395

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ... Length = 396

 Score =  655 bits (1692), Expect = 0.0
 Identities = 174/395 (44%), Positives = 246/395 (62%), Gaps = 2/395 (0%)

Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61

Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121

Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181

Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240

Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYS N GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300

Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEK-GANRDFSFIIKQNGMFSFSGLTKEQVL 359

Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
            +  ++ VY    GR+++AG++      L +AI+ 
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVA 394

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A* Length = 394

 Score =  655 bits (1691), Expect = 0.0
 Identities = 149/395 (37%), Positives = 214/395 (54%), Gaps = 5/395 (1%)

Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
              +    PD IL +   F+AD  + K++LGVG Y+       ++  V  AE  MLE   
Sbjct: 2   LGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETET 61

Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K Y  + G   F K   EL+ G     LK +  AT+  + GTG+LR A  L     P  
Sbjct: 62  TKTYAGLSGEPEFQKAMGELILGDG---LKSETTATLATVGGTGALRQALELARMANPDL 118

Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S PTW NH +I N   +P   YRY+D +T G+DFEGM AD+ AA  G  +LLHGC 
Sbjct: 119 RVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCC 178

Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTG + T +QW +IA ++++   +P  D+AYQGF  G L+ DA+  RL A+R  E+L+
Sbjct: 179 HNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDG-LEEDAAGTRLIASRIPEVLI 237

Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A S SKN G+Y ER G +  +C+ +      +  +  L R  YS PP HGA+IV+ V+  
Sbjct: 238 AASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTT 297

Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
           P L  +W AE+E +   +  +R++L   L         + F+    GMFS  G    Q  
Sbjct: 298 PELRADWMAELEAVRSGMLRLREQLAGELRDL-SGSDRFGFVAEHRGMFSRLGATPEQVK 356

Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
            +  ++ +YM  D RI++AGL+      LA AII+
Sbjct: 357 RIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIE 391

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} Length = 405

 Score =  654 bits (1689), Expect = 0.0
 Identities = 110/405 (27%), Positives = 211/405 (52%), Gaps = 5/405 (1%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
                +     D IL  +  FK DT E+K+NL +G    ++   ++ D V  A+ L+ E 
Sbjct: 3   KLLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADKLVTEN 62

Query: 68  GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 127
            + K YL   G   F+ +T  L+FG ++  ++++++ T+Q + GTG++ +    ++    
Sbjct: 63  YKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV 122

Query: 128 GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 187
              + +++P + NH N+            ++D   + ++++  + D++  P GS ++L  
Sbjct: 123 -ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQI 181

Query: 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247
             +NP  ++   + +++I +++  K H+  FD+AYQGF   +L+ D   +R F  + +  
Sbjct: 182 SCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAF 241

Query: 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV 307
            V QS+SKN+ LY ER GA+++VC + +    V + L  + R  YS+P +H  RI+  ++
Sbjct: 242 SVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLL 301

Query: 308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK---SGKDWSFILRQIGMFSFTGLN 364
            N  L   W  E+  ++ RI N R   F+ L    K      DW+   +Q G+FSF  L 
Sbjct: 302 NNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLL 361

Query: 365 KAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNV 409
              ++++    H+Y+  +GRI+++G++    +Y+AD I  S   +
Sbjct: 362 AKIAEHLKTH-HIYIINNGRINVSGITKNNVDYIADKICLSLSQI 405

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei} Length = 409

 Score =  653 bits (1687), Expect = 0.0
 Identities = 167/405 (41%), Positives = 255/405 (62%), Gaps = 7/405 (1%)

Query: 1   MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKA 60
            +  +        +M  PDPILG+ + F+ D  ++K+NL +G YR +  QP+VL+ VK+A
Sbjct: 8   HMGTLEAQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA 67

Query: 61  ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 120
                  G N +Y P+ G+A+F +   +L FG   + L++ R+A+ Q L GTG+LR+   
Sbjct: 68  T-----LGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGD 122

Query: 121 LIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 179
           L+ R+      +      + NH++IF  A +  + Y YYDP T GL+  GM+  +  AP 
Sbjct: 123 LLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPE 182

Query: 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239
           GS IL+H CAHNPTG+DPT + W ++ DVI+ +NHIPF D+AYQGFA+G LD DA   R 
Sbjct: 183 GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRH 242

Query: 240 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHG 299
                  L+VAQS+SKN GLY  R GA+++  +S++ A R+ SQL  L RPMY+NPP++G
Sbjct: 243 LVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYG 302

Query: 300 ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS 359
           A +V++++ +P L   WK E++ M+ RI  VR++L   L A   S  DWS I RQ+GM +
Sbjct: 303 AWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC-GSVHDWSHIERQVGMMA 361

Query: 360 FTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
           +TGL + Q + + +++H+YMT +GR +++GL+    EY++ AI +
Sbjct: 362 YTGLTREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHN 406

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1 Length = 412

 Score =  648 bits (1675), Expect = 0.0
 Identities = 163/411 (39%), Positives = 235/411 (57%), Gaps = 9/411 (2%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-E 66
           + F  + + PPD + G+ + +  D    K++LG+GAYR +  +P+VL  VK AE L+  +
Sbjct: 3   TLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHND 62

Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
              N EYL I GL +     A+++FG  +  L+E RV +VQ LSGTG+L ++A    ++F
Sbjct: 63  SSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFF 122

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
           P   V +S PTW NH  IF +  +  + Y Y+  +T  LD  G +  I+ AP GS  +LH
Sbjct: 123 PDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLH 182

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR--- 243
            CAHNPTG+DPT EQW +I D I  KNHI  FD AYQGFA+G LD DA +VRL   +   
Sbjct: 183 SCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLST 242

Query: 244 GMELLVAQSYSKNLGLYAERIGAMNVVCS----SSDLAARVKSQLKRLARPMYSNPPVHG 299
              + V QS++KN G+Y ER+G  ++  +    +  +   V SQL ++ R   SNPP +G
Sbjct: 243 VSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYG 302

Query: 300 ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS 359
           A+IVA ++  P L ++W  +M  M+ RI  +R  L D L     +  +W  I+ Q GMFS
Sbjct: 303 AKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKL-GTPGNWDHIVNQCGMFS 361

Query: 360 FTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 410
           FTGL       +     VY+   GR S+AGL+    EY+A AI +     +
Sbjct: 362 FTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEVVRFYA 412

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A* Length = 412

 Score =  647 bits (1671), Expect = 0.0
 Identities = 183/404 (45%), Positives = 251/404 (62%), Gaps = 8/404 (1%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S F  V  A P  +  +   F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +   
Sbjct: 4   SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN 63

Query: 68  GE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
              N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++
Sbjct: 64  SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY 123

Query: 127 -----PGAKVLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
                    V +SSPTW NH  +F  A       YRY+D +  GLD +G ++D++ AP  
Sbjct: 124 NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           S  +LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQGFASG+L+ DA ++R F
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
            + G EL  AQS+SKN GLY ER+G + VV    D   RV SQ++++ R  +SNPP  GA
Sbjct: 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVA  + +P LF EW   ++ MA RI ++R +L   L A  K+   W+ I  QIGMFSF
Sbjct: 304 RIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEAL-KTPGTWNHITDQIGMFSF 362

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
           TGLN  Q + + N+ H+Y+   GRI++ GL+    +Y+A +I +
Sbjct: 363 TGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHE 406

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia} Length = 448

 Score =  636 bits (1642), Expect = 0.0
 Identities = 171/423 (40%), Positives = 245/423 (57%), Gaps = 20/423 (4%)

Query: 2   VAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE 61
               ++S F G   +PPD IL ++  + ADT+ KK+NLGVGAYR E  +P++L  VK+AE
Sbjct: 17  QGPGSMSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAE 76

Query: 62  NLMLE--RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAA 119
            ++       NKEY P+ G   F +    L+FG D+   +E R+A+ Q LSGTGSL +  
Sbjct: 77  AIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGF 136

Query: 120 ALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSEYRYYDPKT-VGLDFEGMIADI 174
             +  + P A+  + S TW NH  I    FN  +VP+ EY Y      + +DF     DI
Sbjct: 137 EFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDI 196

Query: 175 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 234
           ++AP  S  L H CAHNP+GID T  QW+++  +++EK HI FFD AYQGFA+GS + DA
Sbjct: 197 QSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADA 256

Query: 235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS--------SDLAARVKSQLKR 286
            +VR+F   G+E+LVAQS+SKN GLY ERIG ++VV +           L+A + S +  
Sbjct: 257 FAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL 316

Query: 287 LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD---- 342
             R  +S   +HGA IV  +V +  L   +   ++ M+ RI  +R  L  SL+ +     
Sbjct: 317 QIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGP 376

Query: 343 KSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTK-DGRISLAGLSLAKCEYLADA 401
            S   W  IL  IGMF+FTGL     D +  KW +Y+ K  GR+S+ GL+ + C+Y+A+A
Sbjct: 377 GSKGTWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEA 436

Query: 402 IID 404
           I D
Sbjct: 437 IHD 439

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula} Length = 418

 Score =  574 bits (1482), Expect = 0.0
 Identities = 90/426 (21%), Positives = 162/426 (38%), Gaps = 30/426 (7%)

Query: 3   AAVNVSRFEGVTMAPPDPILGVSEAFKA----DTDEKKLNLGVGAYRTEELQPYVLDVVK 58
           A  +V+          D I   +   +A    +  E  +N  +GA   EE     L  VK
Sbjct: 3   AMTSVAAKHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVK 62

Query: 59  KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 118
           +    + +  E+  Y PI G+  F     +  FG       E  + ++    GTG +   
Sbjct: 63  EEYLSLSDS-EHVGYAPIAGIPDFLCAAEKECFGNFR---PEGHIRSIATAGGTGGIHHL 118

Query: 119 AALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKT--VGLDFEGMIADIKA 176
                   PG +VL +   WG ++ I +D       Y  +D         F+  + ++ A
Sbjct: 119 IHNYTE--PGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAA 176

Query: 177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSL 230
                 ++ +   +NPTG     + W+ I + +++       N I   DVAY  ++    
Sbjct: 177 KQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGE-K 235

Query: 231 DNDASSVRLFATRGMELL--VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 288
           D   +    F+    E+L  V  S SK   +Y +R+GAM  +    ++A       K  +
Sbjct: 236 DEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTS 295

Query: 289 RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 348
           R  +SN      R +AN+V +PA F E++AE       I++         +         
Sbjct: 296 RATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQ-----VGL 350

Query: 349 SFILRQIGMFSFTGLNKAQSD-NMTNKWH---VYMTKDGRISLAGLSLAKCEYLADAIID 404
             +  + G F     + A +      K H   + +    RI+  G+   +   LA+ I +
Sbjct: 351 PMLPYRGGFFITIPTDSANAICEELKKEHIYVIALANGIRIAACGIPKCQMTGLAEKIYN 410

Query: 405 SYHNVS 410
           +  ++ 
Sbjct: 411 AMKSLG 416

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  431 bits (1110), Expect = e-150
 Identities = 67/408 (16%), Positives = 143/408 (35%), Gaps = 31/408 (7%)

Query: 12  GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK 71
           G  M  P  IL    +  A+      N  +G    ++        +    N  L   E  
Sbjct: 29  GQNMFYPKGIL----SQSAEAKSTTYNATIGMATNKD-GKMFASSLDAMFND-LTPDEIF 82

Query: 72  EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV 131
            Y P +G+     +  + +   +  +  +     +   + T  L L   L         +
Sbjct: 83  PYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVN--QDDTI 140

Query: 132 LISSPTWGNHKNIFNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190
           L+    WGN+K +FN         Y  +D        + ++  +++      I++    +
Sbjct: 141 LLPEHNWGNYKLVFNTRNGANLQTYPIFDKDG-HYTTDSLVEALQSYNKDKVIMILNYPN 199

Query: 191 NPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDND--ASSVRLFATR 243
           NPTG  PT ++   I + I+         I   D AY G     +      +++    + 
Sbjct: 200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSN 259

Query: 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV 303
            +  +     +K    +  R+G M    S       +++++K L R   S+ P+     V
Sbjct: 260 AILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAV 319

Query: 304 ANVVGNPALFD-EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG 362
            +V+ N   FD E +  ++ +  R +  ++ ++            W       G F    
Sbjct: 320 KHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYH-----SHWQAYDFNSGYFMAIK 374

Query: 363 LNKAQSDNMT----NKWHVYM----TKDGRISLAGLSLAKCEYLADAI 402
           ++    + +     +K+ + +      D RI+ + +      ++ D+I
Sbjct: 375 VHDVDPEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIPHVFDSI 422

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 70.3 bits (171), Expect = 5e-13
 Identities = 63/438 (14%), Positives = 129/438 (29%), Gaps = 121/438 (27%)

Query: 26  EAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV 85
           + F  +         +   +TE+ QP            M     ++ Y   +  A +N V
Sbjct: 80  QKFVEEVLRINYKFLMSPIKTEQRQP-------SMMTRMYIEQRDRLYNDNQVFAKYN-V 131

Query: 86  TAELLFGADNSVLKEQRVA---TVQGLSGTGSLRLAAAL-----IERYFPGAKVLISSPT 137
           +    +      L E R A    + G+ G+G   +A  +     ++              
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF--------- 182

Query: 138 WGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 196
                 IF      W   +  + P+TV    + ++  I               H+     
Sbjct: 183 -----KIF------WLNLKNCNSPETVLEMLQKLLYQIDPN------WTSRSDHSSNIKL 225

Query: 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN--DASSVRLFA--------TRGME 246
                  ++  +++ K +     V         L N  +A +   F         TR  +
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLV---------LLNVQNAKAWNAFNLSCKILLTTRFKQ 276

Query: 247 L---LVAQSYSK------NLGLY---AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSN 294
           +   L A + +       ++ L     + +    + C   DL   V +          +N
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT----------TN 326

Query: 295 PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG--------- 345
           P    + I  ++    A +D WK    +   ++  + +   + L   +            
Sbjct: 327 PRRL-SIIAESIRDGLATWDNWK---HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382

Query: 346 KD-----------WSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSL-- 392
                        W  +++   M     +NK    ++  K      K+  IS+  + L  
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVV---VNKLHKYSLVEKQ----PKESTISIPSIYLEL 435

Query: 393 -AKCEYLAD---AIIDSY 406
             K E       +I+D Y
Sbjct: 436 KVKLENEYALHRSIVDHY 453

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 19/162 (11%)

Query: 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG--FASGSLDNDASSVRLFA---TRGM 245
           NPTG     E    I    + +  +   D  YQ   +      +    +          +
Sbjct: 248 NPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDL 307

Query: 246 ELLVAQSYSKNLGLYAE---RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI 302
            L+  QS SK  G Y E   R G   +    +  +A V+ Q+ ++A  +     + G  +
Sbjct: 308 PLVSYQSVSK--GYYGECGKRGGYFEI----TGFSAPVREQIYKIAS-VNLCSNITGQIL 360

Query: 303 VANVVGNPALFDE----WKAEMEMMAGRIKNVRQKLFDSLSA 340
            + V+  P   DE    +KAE + +   +    + L  + + 
Sbjct: 361 ASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK 402

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 14/203 (6%)

Query: 24  VSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFN 83
                + + D K ++LG+G   TE L  Y+ D + KA   +  R     Y   +G  A  
Sbjct: 59  RKAHQEKNPDAKIISLGIGD-TTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALR 117

Query: 84  KVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK- 142
           +  A   +G       E  +    G S     R+             V +  P++  +  
Sbjct: 118 EAVASTFYGHAGRAADE--IFISDG-SKCDIARIQMMFG----SKPTVAVQDPSYPVYVD 170

Query: 143 -NIFNDARVPWSEYRYYDPKTVGLDFE-GMIADIKAAPGGSFILLHGCA-HNPTGIDPTP 199
            ++        +   +   + +  + +     D+  A     I    C+ +NPTG   T 
Sbjct: 171 TSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFF--CSPNNPTGAAATR 228

Query: 200 EQWEKIADVIQEKNHIPFFDVAY 222
            Q  ++ +  ++   I  +D AY
Sbjct: 229 AQLTELVNFARKNGSILVYDAAY 251

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 22/164 (13%)

Query: 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ------GFASGSLDNDASSVRLFATRG 244
           NPTG   + +  E +     E+      D  YQ           S       +    +  
Sbjct: 246 NPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSN 305

Query: 245 MELLVAQSYSKNLGLYAE---RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGAR 301
           +EL    S SK  G   E   R G M V+    +    +K QL +L       PPV G +
Sbjct: 306 VELASFHSTSK--GYMGECGYRGGYMEVINLHPE----IKGQLVKLLSVRLC-PPVSG-Q 357

Query: 302 IVANVVGNPAL-----FDEWKAEMEMMAGRIKNVRQKLFDSLSA 340
              ++V NP +     F+++  E E + G +    +   D  + 
Sbjct: 358 AAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ 401

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score = 44.0 bits (105), Expect = 4e-05
 Identities = 35/222 (15%), Positives = 74/222 (33%), Gaps = 28/222 (12%)

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
            +       + +I +P +  +      +      +            + ++  +      
Sbjct: 91  TVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRW-SLREADGWQLTDAILEALTPDLDC 149

Query: 181 SFILLHGCA-HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239
            F+    C  +NPTG+ P     + IAD  +  N     D A+  F      ++   +  
Sbjct: 150 LFL----CTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI----PHETGFIPA 201

Query: 240 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVH 298
                  + V +S +K   +   R+G +  V S     AR    ++R  +  +S N    
Sbjct: 202 LKDNP-HIWVLRSLTKFYAIPGLRLGYL--VNSDDAAMAR----MRR-QQMPWSVN---- 249

Query: 299 GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340
               +A + G  AL D   A  +     ++    + + +L  
Sbjct: 250 ---ALAALAGEVALQDS--AWQQATWHWLREEGARFYQALCQ 286

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 53/193 (27%)

Query: 93  ADNSVLKEQRVATVQGLS------GTGS---LRLAA-ALIERYFPGAKVLISSPTWGNHK 142
           A +  L+ +    + G          GS   L     A       G ++    P+     
Sbjct: 65  ASSQKLR-EVAGELYGFDPSWIIMANGSDEVLNNLIRAFAA---EGEEIGYVHPS----- 115

Query: 143 NIFNDARVPWSEYRYY------DPKTVGL--DFEGMIADIKAAPGGSFILLHGCA--HNP 192
             +       S Y           +T GL  DF       +      F+        + P
Sbjct: 116 --Y-------SYYGTLAEVQGARVRTFGLTGDFRIAGFPERYEGKVFFL-----TTPNAP 161

Query: 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252
            G     E  +++A        +   D  Y  FA      +++++ L       ++V ++
Sbjct: 162 LGPSFPLEYIDELARRCAG---MLVLDETYAEFA------ESNALELVRRHE-NVVVTRT 211

Query: 253 YSKNLGLYAERIG 265
            SK+  L   RIG
Sbjct: 212 LSKSYSLAGMRIG 224

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 52/302 (17%), Positives = 92/302 (30%), Gaps = 40/302 (13%)

Query: 75  PIEGLAAFNKVTAELL-FGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PGAKV 131
            + GL +   + A  L   A+N ++       +QGL  T +L          +     K+
Sbjct: 68  GVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKM 127

Query: 132 LISSPTWGNHKNIFNDARVPWSEYRYYDPK--TVGLDFEGMIAD-----IKAAPGGSFIL 184
           +++ P +  H  +           +    +  TV +  +G   D         P    IL
Sbjct: 128 IVTVPGYDRHFLLL----------QTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGIL 177

Query: 185 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF-DVAYQ--GFASGSLDNDASSVRLFA 241
                 NP G   + E+  ++A +         F D AY+             + V L  
Sbjct: 178 FVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLAR 237

Query: 242 TRGMELLVAQ--SYSKNL--GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPV 297
             G         S SK    G     +G +    SS D        L +        P  
Sbjct: 238 DAGYPDRAFVFASTSKITFAGA---GLGFV---ASSEDNIRW----LSKYLGAQSIGPNK 287

Query: 298 HGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW-SFILRQIG 356
                    +         +  M   A  I    + + + L A+   G ++ ++ L + G
Sbjct: 288 VEQARHVKFLTEYP--GGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGG 345

Query: 357 MF 358
            F
Sbjct: 346 YF 347

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 33/228 (14%), Positives = 70/228 (30%), Gaps = 51/228 (22%)

Query: 121 LIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY------DPKTVGLDFEGMIADI 174
            I + F G++ LI+ P+       F       +EY         +      + E +    
Sbjct: 82  QIAQAFRGSRSLIAIPS-------F-------AEYEDACRMYEHEVCFYPSN-EDIGEAD 126

Query: 175 KAAPGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 233
            +     ++    C  +NP G      +  ++ +     +     D +Y  F       +
Sbjct: 127 FSNMDFCWL----CNPNNPDGRLLQRTEILRLLN--DHPDTTFVLDQSYVSFT----TEE 176

Query: 234 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS 293
                    R   L++  S+S   G+   RIG    + ++ D   RV +         ++
Sbjct: 177 VIRPADIKGRK-NLVMVYSFSHAYGIPGLRIGY---IVANKDFMKRVAA-----FSTPWA 227

Query: 294 -NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340
            N        +A       L     A+  +   + +        +L+ 
Sbjct: 228 VN-------ALAIEAAKFILIHP--AQFTLPIRKWQRNTVDFITALNR 266

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 37/225 (16%), Positives = 77/225 (34%), Gaps = 53/225 (23%)

Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYY------DPKTV------GLDFEGMIADIKAA 177
           K+LI  P+       +       +EY                     +D+E +I      
Sbjct: 100 KILIIVPS-------Y-------AEYEINAKKHGVSVVFSYLDENMCIDYEDII---SKI 142

Query: 178 PGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 236
                +++     +NP G     E++  +  + +EK      D A+  F     D  +S 
Sbjct: 143 DDVDSVII--GNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTG---DPSSSF 197

Query: 237 VRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NP 295
           V         L + ++ +K   +   R G    + ++ ++AA++K+      +  ++ N 
Sbjct: 198 VGEIKNYS-CLFIIRAMTKFFAMPGIRFGYG--ITNNKEIAAKIKA-----KQNPWNIN- 248

Query: 296 PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340
                   A +     L D     +E     IK  R++  + L+ 
Sbjct: 249 ------CFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNK 285

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 33/231 (14%), Positives = 60/231 (25%), Gaps = 44/231 (19%)

Query: 73  YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF------ 126
           Y  + G+A   ++ AE L      +  +  VA            ++ +            
Sbjct: 72  YGGLLGIADIRELWAEAL-----GLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPW 126

Query: 127 ---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--TVGLDFEGMIAD----IKAA 177
                 K L   P +  H  I            ++  +   V +  EG        +   
Sbjct: 127 SAEEKVKWLCPVPGYDRHFTIT----------EHFGFEMINVPMTDEGPDMGVVRELVKD 176

Query: 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF-DVAYQ--GFASGSLDNDA 234
           P    +       NPTG+  + +   ++A++           D AY      S       
Sbjct: 177 PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTL-SDEFPIVH 235

Query: 235 SSVRLFATRGMELLVAQ--SYSKNL--GLYAERIGAMNVVCSSSDLAARVK 281
           + +      G         S SK    G     +       SS +      
Sbjct: 236 NVIEFAQAAGNPNRFWFMSSTSKITHAGS---GVSFF---ASSKENIEWYA 280

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score = 40.6 bits (96), Expect = 7e-04
 Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 27/163 (16%)

Query: 111 GTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNI--FNDAR---VPWSEYRYYDPKTVG 164
             GS  +   L++ +  PG   L   P++  H  +          V              
Sbjct: 98  ANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGA-------DFR 150

Query: 165 LDFEGMIADIKA-APGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 222
           +D +  + +I+A  P   F+       +NPTG   + +  E+I +V      I   D AY
Sbjct: 151 IDMDVALEEIRAKQPDIVFV----TTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAY 203

Query: 223 QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 265
             F+        S+  L      +L+V+++ SK       R+G
Sbjct: 204 AEFSP-----SPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLG 241

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score = 40.1 bits (94), Expect = 9e-04
 Identities = 43/298 (14%), Positives = 85/298 (28%), Gaps = 47/298 (15%)

Query: 73  YLPIEGLAAFNKVTAELL-------FGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 125
           Y  ++G+    ++ A+LL          D S L               +  +     E  
Sbjct: 74  YGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKE-- 131

Query: 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--TVGLDFEGMIAD----IKAAPG 179
               K +   P +  H +I             +  +  +V ++ +G   D    +   P 
Sbjct: 132 -ETVKWICPVPGYDRHFSIT----------ERFGFEMISVPMNEDGPDMDAVEELVKNPQ 180

Query: 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVI-QEKNHIPFFDVAYQGFA-SGSLDNDASSV 237
              + +     NPTG   T +  ++++ +     +    +D AY     +         V
Sbjct: 181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIV 240

Query: 238 RLFATRGMELLVAQ--SYSKNL--GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS 293
            L    G         S SK    G     +       +S++            A     
Sbjct: 241 GLGEAAGNPNRFWAFTSTSKITLAGA---GVSFF---LTSAENRKW----YTGHAGIRGI 290

Query: 294 NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA--KDKSGKDWS 349
            P        A   G+    +  +A M   A  +     K+ + L +   +     W+
Sbjct: 291 GPNKVNQLAHARYFGD---AEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWT 345

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	410
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.97
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.97
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.97
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.97
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.97
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.97
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.97
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.97
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.97
1svv_A	359	Threonine aldolase; structural genomics, structura	99.97
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.97
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.96
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.96
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.96
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.96
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.96
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.96
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.96
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.96
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.96
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.96
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.96
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.96
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.96
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.96
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.96
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.96
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.96
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.96
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.96
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.96
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.96
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.96
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.96
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.95
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.95
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.95
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.95
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.95
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.95
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.95
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.95
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.95
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.95
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.95
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.95
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.95
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.95
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.95
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.95
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.95
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.95
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.95
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.95
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.95
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.95
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.94
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.94
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.94
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.94
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.94
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.94
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.94
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.94
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.94
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.94
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.94
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.94
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.94
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.94
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.94
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.94
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.94
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.94
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.94
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.93
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.93
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.93
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.93
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.93
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.93
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.93
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.93
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.93
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.93
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.93
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.93
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.93
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.93
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.92
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.92
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.92
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.92
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.92
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.92
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.92
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.92
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.92
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.91
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.91
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.91
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.91
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.91
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.91
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.91
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.91
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.91
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.91
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.91
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.9
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.9
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.9
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.9
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.89
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.83
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.89
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.89
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.89
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.89
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.89
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.88
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.88
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.88
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.88
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.88
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.88
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.87
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.87
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.87
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.87
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.87
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.87
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.87
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.86
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.86
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.85
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.85
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.84
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.84
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.84
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.83
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.82
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.82
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.79
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.77
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.75
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.73
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.72
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.71
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.69
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.68
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.6
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.58
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.48

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=7.5e-62  Score=464.41  Aligned_cols=398  Identities=43%  Similarity=0.762  Sum_probs=347.2

Q ss_pred             ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283            6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV   85 (410)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a   85 (410)
                      ..|+|++|.+.|+|+|+.+.++++.++++ +|||++|.|.|+.|.|++++.|++|.....+.+..+.|.|..|.++||++
T Consensus        17 ~~~~~~~v~~~p~d~i~~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~a   95 (420)
T 4h51_A           17 TAERWQKIQAQAPDVIFDLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDE   95 (420)
T ss_dssp             HHHHHHTCCCCCCCHHHHHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHH
T ss_pred             hhHHHhCCCCCCCChHHHHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHH
Confidence            34568889999999999999999999876 89999999999999999899999998887766665679999999999999


Q ss_pred             HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-h-CCCCEEEEcCCCCcchhhhhhhCCCCc-cceeeecCCC
Q 015283           86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-Y-FPGAKVLISSPTWGNHKNIFNDARVPW-SEYRYYDPKT  162 (410)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~-~~v~~~~~~~  162 (410)
                      +++++.+..   ...+++..++|.|||+|+..++.++.. + .|||+|++++|+|++|..+++..|.+. ..++..+.++
T Consensus        96 ia~~~~g~~---~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~  172 (420)
T 4h51_A           96 AVKIIYGNT---VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKT  172 (420)
T ss_dssp             HHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGG
T ss_pred             HHHHhcCCC---ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccc
Confidence            999986653   234677778899999999887665543 2 499999999999999999999999974 4566666677


Q ss_pred             cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh
Q 015283          163 VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT  242 (410)
Q Consensus       163 ~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~  242 (410)
                      +.+|.+.+.+.+...+++++++++++||||||.+++.++|++|+++|+++++++|+|++|++|.+++.+.+.+.++...+
T Consensus       173 ~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~  252 (420)
T 4h51_A          173 VSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFAR  252 (420)
T ss_dssp             TEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred             cCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHh
Confidence            88999999998887777889999999999999999999999999999999999999999999998654444555555566


Q ss_pred             cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283          243 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       243 ~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~  322 (410)
                      ..+.++++.||||.|+++|||+||+++++...+...++...+....+.++++++..+|.++...+.++.+..+|+++++.
T Consensus       253 ~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~  332 (420)
T 4h51_A          253 RGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSA  332 (420)
T ss_dssp             TTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             hCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            77799999999999999999999998877777777778888887888888999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHH
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI  402 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l  402 (410)
                      ++++++++|+.+.+.|+ +.|..+.|.++.++.|+|.|.+++.++++.| +++||++.|+||||++++++++|++++++|
T Consensus       333 m~~r~~~~R~~l~~~L~-~~g~~~~~~~i~~q~GmF~~~gls~e~v~~L-~e~~Vy~~~~gRis~Agl~~~ni~~~a~aI  410 (420)
T 4h51_A          333 MAERIRTMRRTVYDELL-RLQTPGSWEHVINQIGMFSFLGLSKAQCEYC-QNHNIFITVSGRANMAGLTHETALMLAQTI  410 (420)
T ss_dssp             HHHHHHHHHHHHHHHHH-HTTCSSCCTHHHHCCSSEEECCCCHHHHHHH-HHTTEECCTTCEEEGGGCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCCeecCCCceEEecCcCHHHHHHH-HhCCEEEcCCCEEEeccCCHHHHHHHHHHH
Confidence            99999999999999999 9887666777888999999999999888665 568999999999999999999999999999


Q ss_pred             HHHhhhc
Q 015283          403 IDSYHNV  409 (410)
Q Consensus       403 ~~~l~~~  409 (410)
                      .++++++
T Consensus       411 ~~vvr~i  417 (420)
T 4h51_A          411 NDAVRNV  417 (420)
T ss_dssp             HHHHC--
T ss_pred             HHHHHHh
Confidence            9999875

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=8.9e-60  Score=450.24  Aligned_cols=399  Identities=27%  Similarity=0.539  Sum_probs=334.1

Q ss_pred             ccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhh-ccCCCccCcCCcccHHHHHHH
Q 015283            8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      |+|+++...++++++++.++++++..+++|||+.|.|.|..+.+++++.++++.. .. .....+.|++..|.++||+++
T Consensus         3 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~ai   81 (405)
T 3k7y_A            3 KLLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLT   81 (405)
T ss_dssp             CGGGGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHH
T ss_pred             chhhcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHH
Confidence            6799999999999999999999988889999999998677776666899999876 43 333347899999999999999


Q ss_pred             HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283           87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD  166 (410)
Q Consensus        87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  166 (410)
                      ++++.+.++..++++++.++.|.||++|+.++..++..+.| |+|++++|+|+.|...++..|++++.+|+.+++++++|
T Consensus        82 a~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  160 (405)
T 3k7y_A           82 QNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDIN  160 (405)
T ss_dssp             HHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEEC
T ss_pred             HHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcC
Confidence            99997777666667765223399999999998666644448 99999999999999999999999999998656678999


Q ss_pred             hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      ++.+++.+.+.++...++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++.+.+..++..+....++
T Consensus       161 ~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~  240 (405)
T 3k7y_A          161 YDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIA  240 (405)
T ss_dssp             HHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCC
T ss_pred             HHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCc
Confidence            99999999753333455554556999999999999999999999999999999999999875322334455555555679


Q ss_pred             EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR  326 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~  326 (410)
                      +++++||||+|+++|||+||++++++++++++++...+....+..+++++.++|.++..+|.++.+.+.|.+++++++++
T Consensus       241 ~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~  320 (405)
T 3k7y_A          241 FSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQR  320 (405)
T ss_dssp             EEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999976677888888887777766666677888899999999999887778899999999999


Q ss_pred             HHHHHHHHHHHhhh---ccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHH
Q 015283          327 IKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII  403 (410)
Q Consensus       327 ~~~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~  403 (410)
                      ++++|+.+.+.|++   ++|....+.+.++++|+|+|++++.+++.++ +++||.+.|+||||+++++++++++++++|+
T Consensus       321 ~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~~~~~~L-~~~gV~v~p~~Ris~a~~~~~~i~~~~~~i~  399 (405)
T 3k7y_A          321 ITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEHL-KTHHIYIINNGRINVSGITKNNVDYIADKIC  399 (405)
T ss_dssp             HHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGGGGTTTT-TTTTEECCTTSEEEGGGCCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCHHHHHHH-HHCCEeecCCCeEEEeccCHHHHHHHHHHHH
Confidence            99999999999862   3553334677889999999998877777777 7789999999999999889999999999999


Q ss_pred             HHhhhc
Q 015283          404 DSYHNV  409 (410)
Q Consensus       404 ~~l~~~  409 (410)
                      ++++++
T Consensus       400 ~~~~~~  405 (405)
T 3k7y_A          400 LSLSQI  405 (405)
T ss_dssp             HHHHCC
T ss_pred             HHHhhC
Confidence            998753

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=2e-55  Score=427.87  Aligned_cols=404  Identities=42%  Similarity=0.760  Sum_probs=344.1

Q ss_pred             eecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhh--ccCCCccCcCCcccHHH
Q 015283            5 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML--ERGENKEYLPIEGLAAF   82 (410)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~l   82 (410)
                      ..||.|+++...++++++.+.++++.+.++.+|||+.|.|+|..+++++.+.+.+++.+..  .......|.+..|.+++
T Consensus        20 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~l   99 (448)
T 3meb_A           20 GSMSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLF   99 (448)
T ss_dssp             --CCTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHH
T ss_pred             chhhHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHH
Confidence            4589999999999999999999999998888999999999999998888899999977665  22234789889999999


Q ss_pred             HHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCCccceeee
Q 015283           83 NKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVPWSEYRYY  158 (410)
Q Consensus        83 r~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~  158 (410)
                      |+++++++.+.....+++++|++++|+||++++.++..+++.+.+||+|++++|+|..+...++    ..|.+++.+++.
T Consensus       100 r~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~  179 (448)
T 3meb_A          100 LEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYL  179 (448)
T ss_dssp             HHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCB
T ss_pred             HHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecc
Confidence            9999999854433223468999888999999999876567778899999999999999999999    999999999986


Q ss_pred             cCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh
Q 015283          159 DPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV  237 (410)
Q Consensus       159 ~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~  237 (410)
                      +.+ ++.+|++.+++.+++.+++++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.+.+.+++
T Consensus       180 ~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~  259 (448)
T 3meb_A          180 RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAV  259 (448)
T ss_dssp             CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHH
T ss_pred             ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhH
Confidence            555 6899999999999865456888889999999999999999999999999999999999999999975322334566


Q ss_pred             HHHhhcCCcEEEEecccccccccCCCcceEEEEe--------CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC--------SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       238 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                      ..+....++++++.|+||.||++|+|+||+.+++        ++++..+.+...+....+..+++++.+++.++..+|.+
T Consensus       260 ~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  339 (448)
T 3meb_A          260 RMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHD  339 (448)
T ss_dssp             HHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred             HHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcC
Confidence            6665667799999999999999999999985555        56655556776676666667778999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-----CcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC-C
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK-----DWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-G  383 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~-g  383 (410)
                      .++...|.+++++.+++++++++++.+.|+ +++.++     .+....+++++|.|.+++.+++.++++++||++.|| |
T Consensus       340 ~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gV~v~~G~g  418 (448)
T 3meb_A          340 KRLLQMFYDNVKEMSARIHRMRSLLHASLA-KRKTPGPGSKGTWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKAGG  418 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCSTTTCCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEEECSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCCCcCcccccceeCCCceEEEecCCCHHHHHHHHHhCCEEEeCCCc
Confidence            888888988999999999999999999998 886433     356677899999999999888999988889999995 5


Q ss_pred             eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          384 RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |||++.++++++++++++|+++++++
T Consensus       419 Ris~a~~~~~~i~~~~~~l~~~l~~~  444 (448)
T 3meb_A          419 RMSMCGLTESNCDYVAEAIHDAVTKL  444 (448)
T ss_dssp             EEEGGGCCTTTHHHHHHHHHHHHHHS
T ss_pred             EEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            99998878899999999999998754

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=2.7e-55  Score=423.94  Aligned_cols=399  Identities=41%  Similarity=0.753  Sum_probs=342.0

Q ss_pred             eecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283            5 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK   84 (410)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~   84 (410)
                      .-||.+.++...++++++.+...+..+..+++|||+.|.++++.+.+++++.+++++.+.+.......|.+..|.+++|+
T Consensus        20 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~   99 (420)
T 4f4e_A           20 GSMSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDA   99 (420)
T ss_dssp             --CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHH
T ss_pred             cccCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHH
Confidence            45788999999999999999999988877899999999887777877767999999988876544478999999999999


Q ss_pred             HHHHHhcCCCCCcccCC--ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCC
Q 015283           85 VTAELLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKT  162 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~--~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  162 (410)
                      ++++++.+..+..++++  +|++  |+||++++.++++++..+.+||+|++++|+|.++...++..|.+++.+++.++++
T Consensus       100 ~ia~~l~~~~~~~~~~~~~~i~~--t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~  177 (420)
T 4f4e_A          100 SVQKLLLGDDSPLIAAGRVVTAQ--ALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKT  177 (420)
T ss_dssp             HHHHHHHCTTCHHHHTTCEEEEE--EEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTT
T ss_pred             HHHHHhcCCCccccccCceEEEE--CCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeecccc
Confidence            99999977766555678  8888  9999999999876666788999999999999999999999999999999865677


Q ss_pred             cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh
Q 015283          163 VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT  242 (410)
Q Consensus       163 ~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~  242 (410)
                      +.+|++.+++.+++.+++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ .+.+..++..+..
T Consensus       178 ~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~-~~~~~~~~~~~~~  256 (420)
T 4f4e_A          178 NGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGES-IEADAAAVRLFAA  256 (420)
T ss_dssp             TEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSC-TTGGGHHHHHHHH
T ss_pred             CccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCC-cchhhHHHHHHHh
Confidence            899999999999865557889999999999999999999999999999999999999999999975 2233445555555


Q ss_pred             cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283          243 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       243 ~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~  322 (410)
                      ..+++++++|+||.+|++|+|+||+++++++++.++++...+....+..+++++.+++.++..++.+..+...|.+++++
T Consensus       257 ~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  336 (420)
T 4f4e_A          257 ANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGE  336 (420)
T ss_dssp             TTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            67799999999999999999999986556677777776666665555567778888888888889988877778888999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHH
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI  402 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l  402 (410)
                      .+++++++++++.+.|+ +++....+.+..+++++|+|++++.+.+.++++++||.+.|++|||++.++++++++++++|
T Consensus       337 ~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gI~v~~~~Ris~~~~~~~~i~~~~~~l  415 (420)
T 4f4e_A          337 MRDRIRAMRNGLVERLK-AAGIERDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAI  415 (420)
T ss_dssp             HHHHHHHHHHHHHHHHH-HTTCSSCCTHHHHSCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-hcCCCCCceeECCCccEEEEeCCCHHHHHHHHHhCCEEecCCCeEEEecCCHHHHHHHHHHH
Confidence            99999999999999998 87422125777788999999999888888888878999999999999877899999999999


Q ss_pred             HHHhh
Q 015283          403 IDSYH  407 (410)
Q Consensus       403 ~~~l~  407 (410)
                      +++++
T Consensus       416 ~~~l~  420 (420)
T 4f4e_A          416 AAVLK  420 (420)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            99863

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=3.1e-55  Score=421.03  Aligned_cols=400  Identities=50%  Similarity=0.903  Sum_probs=341.3

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      .|.|+.+...++++++++.+.++.+.++.+|||+.|.|+|..+++++.+.+.+++.+.........|.+..|.+++|+++
T Consensus         1 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   80 (401)
T 7aat_A            1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS   80 (401)
T ss_dssp             CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred             CChhhcCCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHH
Confidence            37799999999999999999999988888999999999888888887889999888776532347898889999999999


Q ss_pred             HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      ++++.+.++..+++++|+++.|+||++++.++...+.. +.+||+|++++|+|..|...++..|.+++.+++.+++++.+
T Consensus        81 a~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  160 (401)
T 7aat_A           81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL  160 (401)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred             HHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCcc
Confidence            99998888888889999776689999999988655543 36899999999999999999999999999999866667899


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      |++.+++.+++.+++++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.+.+.+++..+....+
T Consensus       161 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  240 (401)
T 7aat_A          161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI  240 (401)
T ss_dssp             CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred             CHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCC
Confidence            99999888876545788888999999999999999999999999999999999999999987532113344544456678


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      ++++++|+||.||++|+|+||++++.++++..+.+...+....+..+.+++..++.++..++.++++...|.+++++.++
T Consensus       241 ~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  320 (401)
T 7aat_A          241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD  320 (401)
T ss_dssp             CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             cEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999997655677766666666666655566678888888888889888888888888999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHH
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~  405 (410)
                      +++++++++.+.|+ +++....+.+..+++++|.|++++.+.+.++++++||.+.|++||+++..+++++++++++|+++
T Consensus       321 ~~~~~r~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~  399 (401)
T 7aat_A          321 RIISMRTQLVSNLK-KEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV  399 (401)
T ss_dssp             HHHHHHHHHHHHHH-HTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-hcCCCCCCceecCCcceEEecCCCHHHHHHHHHhCCEeccCCCeEEeccCChhhHHHHHHHHHHH
Confidence            99999999999998 88643345677789999999999988888888888999999999999987888899999999988


Q ss_pred             hh
Q 015283          406 YH  407 (410)
Q Consensus       406 l~  407 (410)
                      ++
T Consensus       400 ~~  401 (401)
T 7aat_A          400 TK  401 (401)
T ss_dssp             HC
T ss_pred             hC
Confidence            63

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=1.4e-53  Score=410.62  Aligned_cols=396  Identities=42%  Similarity=0.765  Sum_probs=316.2

Q ss_pred             ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283            6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV   85 (410)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a   85 (410)
                      .-|.|+++...++++++.+.++++++..+++|||+.|.|+|..+++.+.+.+.++    .... ...|.+..|.+++|++
T Consensus        13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a----~~~~-~~~y~~~~g~~~lr~~   87 (409)
T 4eu1_A           13 EAQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA----TLGT-NMDYAPVTGIASFVEE   87 (409)
T ss_dssp             --------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTC----CCCS-CCCCCCTTCCHHHHHH
T ss_pred             hhhHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhc----Cccc-cccCCCCCCcHHHHHH
Confidence            3478999999999999999999999888899999999987766665545555544    3223 4789889999999999


Q ss_pred             HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283           86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG  164 (410)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~  164 (410)
                      +++++.+..+..+++++|.+..|.||++++.++..++..+ .+||+|++++|+|..+...++..|.+++.+++.+++++.
T Consensus        88 ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  167 (409)
T 4eu1_A           88 AQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKG  167 (409)
T ss_dssp             HHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTE
T ss_pred             HHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCc
Confidence            9999866554444567886555899999999876555544 489999999999999999999999999999986667789


Q ss_pred             cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      +|++.+++.+++.++.++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++...+..++..+.+..
T Consensus       168 ~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~  247 (409)
T 4eu1_A          168 LNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMV  247 (409)
T ss_dssp             ECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTS
T ss_pred             CcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhC
Confidence            99999999997644567888889999999999999999999999999999999999999998753111234444444556


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA  324 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~  324 (410)
                      +++++++||||.+|++|+|+||+.+++++++..+.+...+....+..+.+++.+++.++...|++..+...|.+++++.+
T Consensus       248 ~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  327 (409)
T 4eu1_A          248 PNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMS  327 (409)
T ss_dssp             SCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            78999999999999999999997545667786666666666555555667888898999889998877777888889999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHH
Q 015283          325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~  404 (410)
                      ++++++++++.+.|+ ++|.+..+.+..+++++|.|++++.+++.++++++||.+.|++||+++..+++++++++++|++
T Consensus       328 ~~~~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~p~~Ri~~~~~~~~~i~~~~~~l~~  406 (409)
T 4eu1_A          328 SRIAEVRKRLVSELK-ACGSVHDWSHIERQVGMMAYTGLTREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHN  406 (409)
T ss_dssp             HHHHHHHHHHHHHHH-HTTCCSCCHHHHHSCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-hcCCCCCcceecCCceEEEEeCCCHHHHHHHHHcCCEEEcCCCEEEEEecCHhhHHHHHHHHHH
Confidence            999999999999999 8874443566778999999999988888899887899999999999998889999999999998


Q ss_pred             Hhh
Q 015283          405 SYH  407 (410)
Q Consensus       405 ~l~  407 (410)
                      +++
T Consensus       407 ~l~  409 (409)
T 4eu1_A          407 VTK  409 (409)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            863

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=1.9e-52  Score=401.10  Aligned_cols=393  Identities=40%  Similarity=0.717  Sum_probs=334.1

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHH-hhccCCCccCcCCcccHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      ++.+...++++++.+.+.+..+..+++|||+.|.|+|..+.+++++.+.+++.+ .+.......|++..|..++|+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~   81 (397)
T 3fsl_A            2 FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAP   81 (397)
T ss_dssp             CTTCCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHH
T ss_pred             cccCCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHH
Confidence            567889999999999999998888899999999887777877777999999998 7765444789888999999999999


Q ss_pred             HhcCCCCCcccCC--ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283           89 LLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD  166 (410)
Q Consensus        89 ~~~~~~~~~~~~~--~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  166 (410)
                      ++....+..++++  +|++  |+||++++.++.+++..+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|
T Consensus        82 ~~~~~~~~~~~~~~~~i~~--t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  159 (397)
T 3fsl_A           82 LLFGADHPVLKQQRVATIQ--TLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVR  159 (397)
T ss_dssp             HHHCTTCHHHHTTCEEEEE--ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEEC
T ss_pred             HHhcCCcccccccceEEEE--cCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCc
Confidence            9877666555678  8888  99999999998766666789999999999999999999999999999998656778999


Q ss_pred             hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      ++.+++.+++.+++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ .+.+..++..+....++
T Consensus       160 ~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~  238 (397)
T 3fsl_A          160 FNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLP  238 (397)
T ss_dssp             HHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSC-TTGGGHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccC-cccccHHHHHHHhcCCC
Confidence            99999999865457889999999999999999999999999999999999999999999865 22233455455556779


Q ss_pred             EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR  326 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~  326 (410)
                      +++++|+||.+|++|+|+||+++.+++++.++++...+....+..+.+++.+++.++...+.+..+...|.+++++.+++
T Consensus       239 ~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~  318 (397)
T 3fsl_A          239 ALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTR  318 (397)
T ss_dssp             EEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999865456777777666666555455666778888888888899887777778888999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283          327 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       327 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l  406 (410)
                      ++++++++.+.|+ +.+....+.+..+++++|.|++++.+.+.++++++||.+.|++||+++..+++++++++++|++++
T Consensus       319 ~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~Ris~~~~~~~~i~~~~~~l~~~l  397 (397)
T 3fsl_A          319 ILAMRQELVKVLS-TEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM  397 (397)
T ss_dssp             HHHHHHHHHHHHH-HHCTTSCCTHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHH-hcCCCCCceeecCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEEecCHhhHHHHHHHHHhhC
Confidence            9999999999998 774211256677888999999998888888888889999999999998878899999999999874

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=2.9e-50  Score=387.78  Aligned_cols=402  Identities=41%  Similarity=0.746  Sum_probs=326.3

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHH-hhccCCCccCcCCcccHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKV   85 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~a   85 (410)
                      ||.|+++...++++++.+.+.+..+..+++|||+.|.|+|.++++++++.+.+++.+ .+.......|.+..|.+++|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~   81 (412)
T 1yaa_A            2 ATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN   81 (412)
T ss_dssp             TTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred             cchhccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHH
Confidence            788999999999999999888887766789999999998888877778999999988 7754334679888999999999


Q ss_pred             HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      +++++.+.++..+++++|++++|+||++++.++..++..+.+||+|++++|+|..+...++..|.+++.+++.+++++.+
T Consensus        82 ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~  161 (412)
T 1yaa_A           82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSL  161 (412)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEE
T ss_pred             HHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCcc
Confidence            99998776676667889988778999999999866666677999999999999999999999999999998744456889


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      |++.+++.+++.++.++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++...+..++..+....+
T Consensus       162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~  241 (412)
T 1yaa_A          162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLS  241 (412)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTT
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCC
Confidence            99999999976433467777799999999999999999999999999999999999999886420002223333333445


Q ss_pred             ---cEEEEecccccccccCCCcceEEEEe----CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283          246 ---ELLVAQSYSKNLGLYAERIGAMNVVC----SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA  318 (410)
Q Consensus       246 ---~~i~~~S~sK~~~~~G~r~G~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~  318 (410)
                         ++++++|+||.+|++|+|+||+++++    ++++..+.+...+....+..+.+++.+++.++...|++..+.+.|.+
T Consensus       242 ~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  321 (412)
T 1yaa_A          242 TVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHK  321 (412)
T ss_dssp             TTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHH
Confidence               79999999999998899999984224    25553334444444433445566788888888888888766666677


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHH
Q 015283          319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYL  398 (410)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~  398 (410)
                      ++++.+++++++++++.+.|+ +++..+.+.+..+.+++|+|.+++.+.+.++++++||.+.+..||+++..++++++++
T Consensus       322 ~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~  400 (412)
T 1yaa_A          322 DMVTMSSRITKMRHALRDHLV-KLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYV  400 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hhCCCCCeeeeccCceEEEeeCCCHHHHHHHHHhCCEEeccCcEEEEccCCHhHHHHH
Confidence            889999999999999999998 8762112466678889999998887777888877899999977999986689999999


Q ss_pred             HHHHHHHhhhc
Q 015283          399 ADAIIDSYHNV  409 (410)
Q Consensus       399 ~~~l~~~l~~~  409 (410)
                      +++|+++++.+
T Consensus       401 ~~~l~~~~~~~  411 (412)
T 1yaa_A          401 AKAIDEVVRFY  411 (412)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhh
Confidence            99999998754

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=1.3e-49  Score=383.17  Aligned_cols=401  Identities=46%  Similarity=0.823  Sum_probs=326.8

Q ss_pred             ccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhc-cCCCccCcCCcccHHHHHHH
Q 015283            8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-RGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~y~~~~g~~~lr~ai   86 (410)
                      |.|+++...+++++..+.+.+.++..+++|||+.|.|++..+++++++.+.+++.+... ....+.|.+..|..++|+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l   83 (412)
T 1ajs_A            4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA   83 (412)
T ss_dssp             CTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred             chhhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence            56888999999999998888877656789999999987777766667999999988762 22346798889999999999


Q ss_pred             HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC-----CEEEEcCCCCcchhhhhhhCCCC-ccceeeecC
Q 015283           87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-----AKVLISSPTWGNHKNIFNDARVP-WSEYRYYDP  160 (410)
Q Consensus        87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~~  160 (410)
                      ++++.+.++..+++++|++++|+||+++++++..++..+.+|     |+|++++|+|..+...++..|.+ ++.+++.++
T Consensus        84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  163 (412)
T 1ajs_A           84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT  163 (412)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred             HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence            999867666666788988777899999999986666667899     99999999999999999999999 999988655


Q ss_pred             CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          161 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       161 ~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                      +++.+|++.+++.+.+.+++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++.+...+++..+
T Consensus       164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~  243 (412)
T 1ajs_A          164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF  243 (412)
T ss_dssp             TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred             CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence            67889999999998764456788878999999999999999999999999999999999999999864200122344434


Q ss_pred             hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM  320 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  320 (410)
                      ....++++++.|+||.+|++|+|+||+++..++++..+.+...+......++.+++.+++.++...|++..+...|.+++
T Consensus       244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  323 (412)
T 1ajs_A          244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNV  323 (412)
T ss_dssp             HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             hccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHH
Confidence            44457899999999999999999999843224677666665555544444566667888888888888776555566778


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHH
Q 015283          321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLAD  400 (410)
Q Consensus       321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~  400 (410)
                      ++.+++++++++++.+.|+ +++.+..+.+..+.+++|.|++++.+++.++++++||.+.|+.||+++..++++++++++
T Consensus       324 ~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~Ris~~~~~~~~i~~~~~  402 (412)
T 1ajs_A          324 KTMADRILSMRSELRARLE-ALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVAT  402 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-hhCCCCCeeEEcCCCceEEEeCCCHHHHHHHHHhCCEEecCCcEEEeeeCCHHHHHHHHH
Confidence            8999999999999999998 875222246667888999999888777888887789999998999998668999999999


Q ss_pred             HHHHHhhhc
Q 015283          401 AIIDSYHNV  409 (410)
Q Consensus       401 ~l~~~l~~~  409 (410)
                      +|+++++++
T Consensus       403 ~l~~~l~~~  411 (412)
T 1ajs_A          403 SIHEAVTKI  411 (412)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            999998765

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=3.7e-49  Score=378.01  Aligned_cols=395  Identities=44%  Similarity=0.775  Sum_probs=303.0

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      |++++..++++++.+...+.....+++|||+.|.+++..+.++.++.+.+++.+.+.......|.+..|..++|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~   81 (396)
T 2q7w_A            2 FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQEL   81 (396)
T ss_dssp             CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccccccCCCchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHH
Confidence            67788999999988887777665578999999998776665555799999988876433346798889999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      +.+..+..+++++|+++.|+||+++++++..++..+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++.
T Consensus        82 ~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  161 (396)
T 2q7w_A           82 LFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDA  161 (396)
T ss_dssp             HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHH
T ss_pred             HhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHH
Confidence            86655444567888755589999999998666655679999999999999999999999999999988544678899999


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +++.+.+.+++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ .....++..+....+++++
T Consensus       162 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  240 (396)
T 2q7w_A          162 LINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGL-EEDAEGLRAFAAMHKELIV  240 (396)
T ss_dssp             HHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCH-HHHTHHHHHHHHHCSCEEE
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCc-cchhHHHHHHHhcCCcEEE
Confidence            999997643457888889999999999999999999999999999999999999988641 0122344434444578999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ++|+||.+|++|+|+||+++.+++++..+.+...+....+..+..++.+++.++...|++..+.+.|.+++++.++++++
T Consensus       241 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~  320 (396)
T 2q7w_A          241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQR  320 (396)
T ss_dssp             EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred             EEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999842124565555566555544444555678888888888888865555567778899999999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l  406 (410)
                      +++++.+.|+ +.+.+..+.+..+.+++|+|++++.+.+.++++++||.+.|+.||+++..+++++++++++|++++
T Consensus       321 ~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~Ris~~~~~~e~i~~~~~~l~~~l  396 (396)
T 2q7w_A          321 MRQLFVNTLQ-EKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             HHHHHHHHHH-HTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHH-hcCCCCCcceecCCCceEEEecCCHHHHHHHHHhcCeeecCCceEEEeecCHHHHHHHHHHHHhcC
Confidence            9999999998 876211246667888999999888777778777789999998899998668999999999998864

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=5.8e-48  Score=369.51  Aligned_cols=391  Identities=38%  Similarity=0.664  Sum_probs=313.5

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      |.++...++++++.+.+.+..+..+++|||+.|.|++..+.+++++.+.+++.+.+.......|++..|..++|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~   81 (394)
T 2ay1_A            2 LGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGEL   81 (394)
T ss_dssp             GGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHH
T ss_pred             CccCccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHH
Confidence            67788999999999888888776678999999998666664555799999988876433346798888999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      +.+.   .+++++|++++|+||+++++++..++..+.+||+|+++.|+|..+...++..|.+++.+++.+++++.+|++.
T Consensus        82 ~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  158 (394)
T 2ay1_A           82 ILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEG  158 (394)
T ss_dssp             HHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHH
T ss_pred             HhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHH
Confidence            7433   1246788765689999999998666655569999999999999999999999999999998654678899999


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +++.+++.+++++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++ ..+..++..+....+++++
T Consensus       159 l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  237 (394)
T 2ay1_A          159 MKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGL-EEDAAGTRLIASRIPEVLI  237 (394)
T ss_dssp             HHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCH-HHHHHHHHHHHHHCSSEEE
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCc-ccchHHHHHHhhcCCCEEE
Confidence            999998643457788889999999999999999999999999999999999999988531 0022334334444568999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ++|+||.+|++|+|+||+++.++++++++.+...+....+..+.+++.+++.++...|++.++...|.+++++.++++++
T Consensus       238 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~  317 (394)
T 2ay1_A          238 AASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLR  317 (394)
T ss_dssp             EEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999843224666666666655544444555667888888888888765555567778899999999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHH
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~  405 (410)
                      +++++.+.|+ +++....+.+..+.+++|+|++++.+.+.++++++||.+.|+.||+++..+++++++++++|+++
T Consensus       318 ~~~~l~~~L~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          318 LREQLAGELR-DLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             HHHHHHHHHH-HHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-hcCCCCCeeEEcCCceEEEeeCCCHHHHHHHHHhCCEEecCCCeEEeecCCHhhHHHHHHHHHHc
Confidence            9999999998 77521124566678899999988877777777778999999889999866899999999999886

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=4.7e-47  Score=366.07  Aligned_cols=386  Identities=22%  Similarity=0.290  Sum_probs=303.2

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCC----CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTD----EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV   85 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a   85 (410)
                      ..+....++++++.+.+++.++..    .++|+|+.|.|+|..+.+++++.+.+++.+...... ..|.+..|.+++|++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~   88 (418)
T 3rq1_A           10 KHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGYAPIAGIPDFLCA   88 (418)
T ss_dssp             TTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSCCCTTCCHHHHHH
T ss_pred             hhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCCCCCCChHHHHHH
Confidence            344566778888888877765543    378999999998887777778999998877554332 679888999999999


Q ss_pred             HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      +++++.+.++.. .+++|++  |+||++++..++.  ..+.+||+|++++|+|..|...++..|.+++.+++.++ ++.+
T Consensus        89 ia~~~~~~~~~~-~~~~i~~--t~g~~~al~~~~~--~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~  162 (418)
T 3rq1_A           89 AEKECFGNFRPE-GHIRSIA--TAGGTGGIHHLIH--NYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDE-HNNF  162 (418)
T ss_dssp             HHHHHHGGGCCS-SEEEEEE--ESHHHHHHHHHHH--HHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCT-TSSB
T ss_pred             HHHHHhcccCcc-ccccEEE--CCchHHHHHHHHH--HhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCC-CCCc
Confidence            999986654422 1238888  9999999999843  44779999999999999999999999999999998533 3789


Q ss_pred             ChhhHHHHHhcC--CCCcEEEEeCCC-CCCCCCCCCHHHHHHHHHHHH------HcCCcccccccCCCCCCCCCCCchhH
Q 015283          166 DFEGMIADIKAA--PGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQ------EKNHIPFFDVAYQGFASGSLDNDASS  236 (410)
Q Consensus       166 d~~~l~~~i~~~--~~~~~~ii~~~p-~NPtG~~~~~~~l~~i~~~~~------~~~~~li~Deay~~~~~~~~~~~~~~  236 (410)
                      |++.+++.+.+.  ++.+.++++++| |||||.+++.+++++|+++|+      +||+++|+||+|.++.+.+  ....+
T Consensus       163 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~--~~~~~  240 (418)
T 3rq1_A          163 NHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEK--DEVRA  240 (418)
T ss_dssp             CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCH--HHHHG
T ss_pred             CHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCCh--HHHHH
Confidence            999999988741  123447777899 999999999999999999999      8999999999999888542  11111


Q ss_pred             hHHHh-hcCCc--EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhH
Q 015283          237 VRLFA-TRGME--LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALF  313 (410)
Q Consensus       237 ~~~~~-~~~~~--~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~  313 (410)
                      +.... ...++  +++++||||.+|++|+|+||+++.++++++++.+...........+++++..++.++...|++.++.
T Consensus       241 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~  320 (418)
T 3rq1_A          241 FFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKF  320 (418)
T ss_dssp             GGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHH
T ss_pred             HHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHH
Confidence            11111 12234  5889999999999999999985444588877777665443333345567888888888999988776


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-CHHHHHHhhhcCcEEEcCCC---eEEecC
Q 015283          314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG---RISLAG  389 (410)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g---Ris~~~  389 (410)
                      +.|.++.++.+++++++++++.+.|+ ++|    +.+..+++++|+|+.+ +.+.+.+.++++||.+.|++   |||++.
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~iRis~~~  395 (418)
T 3rq1_A          321 KEYEAERNCYYQLIRDRADIFKQEAA-QVG----LPMLPYRGGFFITIPTDSANAICEELKKEHIYVIALANGIRIAACG  395 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHT----CCCCCCCSSSEEEEECTTHHHHHHHHHHTTEECEECSSEEEEEGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-hcC----CCCCCCCceEEEEcCCCCHHHHHHHHHhCCEEEecCCCCeEEEEec
Confidence            77788888889999999999999998 887    4677888999999865 44444445566899999986   999886


Q ss_pred             CCcccHHHHHHHHHHHhhhc
Q 015283          390 LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++++++|+++++++
T Consensus       396 ~~~~~i~~~~~~l~~~l~~~  415 (418)
T 3rq1_A          396 IPKCQMTGLAEKIYNAMKSL  415 (418)
T ss_dssp             SCHHHHTTHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHH
Confidence            69999999999999998764

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=7.1e-46  Score=353.94  Aligned_cols=364  Identities=17%  Similarity=0.157  Sum_probs=283.6

Q ss_pred             ccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia   87 (410)
                      +++++..+++++..+.+.+.+.  ..+++|+|+.|.+    ..+ .++.+.+++.+.+.... ..|++..|.+++|++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia   78 (385)
T 1b5p_A            5 SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEP----DFD-TPEHVKEAARRALAQGK-TKYAPPAGIPELREALA   78 (385)
T ss_dssp             CHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHH
T ss_pred             hhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHH
Confidence            3446667777777766655442  2357899999987    333 26788888877765444 67988889999999999


Q ss_pred             HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283           88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF  167 (410)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  167 (410)
                      +++...++..+++++|++  |+||++++.++..  ..+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|+
T Consensus        79 ~~~~~~~g~~~~~~~i~~--t~g~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  154 (385)
T 1b5p_A           79 EKFRRENGLSVTPEETIV--TVGGSQALFNLFQ--AILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDP  154 (385)
T ss_dssp             HHHHHTTCCCCCGGGEEE--ESHHHHHHHHHHH--HHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCH
T ss_pred             HHHHHHhCCCCChHHEEE--cCChHHHHHHHHH--HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCH
Confidence            999877787778899999  9999999999843  347799999999999999999999999999999985445678999


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +.+++.+++   +++++++++||||||.++|.+++++|+++|++||++||+||+|..+.+++ .  ..++..+ .. +++
T Consensus       155 ~~l~~~l~~---~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~--~~~~~~~-~~-~~~  226 (385)
T 1b5p_A          155 ERVRRAITP---RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-E--HFSPGRV-AP-EHT  226 (385)
T ss_dssp             HHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-C--CCCGGGT-CT-TTE
T ss_pred             HHHHHhcCC---CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-C--CCCHHHc-CC-CCE
Confidence            999988864   57777889999999999999999999999999999999999999988642 1  1122222 22 689


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      ++++||||.+|++|+|+||+++   ++++++++...    ....+.+++.++|.++..+|++.+..   .+++++.++++
T Consensus       227 i~~~s~SK~~~~~G~RiG~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~  296 (385)
T 1b5p_A          227 LTVNGAAKAFAMTGWRIGYACG---PKEVIKAMASV----SRQSTTSPDTIAQWATLEALTNQEAS---RAFVEMAREAY  296 (385)
T ss_dssp             EEEEESTTTTTCGGGCCEEEEC---CHHHHHHHHHH----HHTTTCSCCHHHHHHHHHHHHCHHHH---HHHHHHHHHHH
T ss_pred             EEEEechhhcCCcccceEEEEe---CHHHHHHHHHH----HhhccCCCCHHHHHHHHHHHhCCCcc---hHHHHHHHHHH
Confidence            9999999999999999999854   77766655443    22234467788888887777651111   23467888999


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcc
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLA  393 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~  393 (410)
                      +++++++.+.|+ ++|    +.+..+++++|.|+.+     +. ++.+.++ ++||.+.||      +  |||++. +++
T Consensus       297 ~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~-~~~  369 (385)
T 1b5p_A          297 RRRRDLLLEGLT-ALG----LKAVRPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYAT-SEE  369 (385)
T ss_dssp             HHHHHHHHHHHH-HHT----CCBCCCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCS-CHH
T ss_pred             HHHHHHHHHHHH-HCC----CeecCCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecC-CHH
Confidence            999999999998 776    4667788888888644     33 4466666 579999886      2  999985 899


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      ++++++++|++++++
T Consensus       370 ~i~~~l~~l~~~l~~  384 (385)
T 1b5p_A          370 NLRKALERFARVLGR  384 (385)
T ss_dssp             HHHHHHHHGGGGC--
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999888754

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=2.1e-45  Score=355.37  Aligned_cols=375  Identities=13%  Similarity=0.139  Sum_probs=280.1

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCC--CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTD--EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia   87 (410)
                      ++.+...++++|..+.+.++.+.+  +++|+|+.|.+ +..+..++++.+++++.+.+.......|.+..|..++|++++
T Consensus        28 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~l~~g~~-~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la  106 (427)
T 3dyd_A           28 PSDMAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGDP-TVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIA  106 (427)
T ss_dssp             CCC----------------CCCCCTTSCCEECCCSCT-TTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHH
T ss_pred             hhhHhhcccchHHHHHHHHhhcccCCCCEEeCCCcCC-CccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHH
Confidence            467777888999999888877654  36799999997 444444558999999988876544468988899999999999


Q ss_pred             HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283           88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF  167 (410)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  167 (410)
                      +++.+. +..+++++|++  |+||++++.+++..+  +.+||+|+++.|+|..+...++..|.+++.+++.+++++.+|+
T Consensus       107 ~~~~~~-~~~~~~~~v~~--t~g~t~al~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  181 (427)
T 3dyd_A          107 SYYHCP-EAPLEAKDVIL--TSGCSQAIDLCLAVL--ANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDL  181 (427)
T ss_dssp             HHHCBT-TBCCCGGGEEE--ESSHHHHHHHHHHHH--CCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECH
T ss_pred             HHHhhc-CCCCChHHEEE--ecCcHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCH
Confidence            998765 66677899999  999999999985443  6799999999999999999999999999999997667788999


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +.+++.+++   ++.++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.  ....+.. .....++
T Consensus       182 ~~l~~~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~--~~~~~~~-~~~~~~v  255 (427)
T 3dyd_A          182 KQLEYLIDE---KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDC--KYEPLAT-LSTDVPI  255 (427)
T ss_dssp             HHHHSSCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSC--CCCCGGG-GCSSCCE
T ss_pred             HHHHHHhcc---CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCC--cCccHHH-hCCCCcE
Confidence            999988865   577778899999999999999999999999999999999999999986531  1112222 2233468


Q ss_pred             EEEecccccccccCCCcceEEEEeCCc--hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSS--DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      ++++|+||.|+++|+|+||+++  .++  ...+.+...+...... ..+++.+++.++..+|++..     .+.+++.++
T Consensus       256 i~~~S~sK~~~~~G~riG~~~~--~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~-----~~~~~~~~~  327 (427)
T 3dyd_A          256 LSCGGLAKRWLVPGWRLGWILI--HDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTP-----GEFYHNTLS  327 (427)
T ss_dssp             EEEEESTTTSSCGGGCCEEEEE--ECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSC-----HHHHHHHHH
T ss_pred             EEEeeccccCCCcCcceEEEEe--cCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcC-----HHHHHHHHH
Confidence            9999999999999999999854  332  1111233333332222 34677888888877776321     233567888


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEe
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISL  387 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~  387 (410)
                      +++++++++.+.|+ +++.   +.+..+++++|+|+++.          .+++.++++++||.+.||+        ||++
T Consensus       328 ~~~~~~~~l~~~L~-~~~g---~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~  403 (427)
T 3dyd_A          328 FLKSNADLCYGALA-AIPG---LRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI  403 (427)
T ss_dssp             HHHHHHHHHHHHHH-HSTT---EEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEES
T ss_pred             HHHHHHHHHHHHHh-cCCC---ceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEE
Confidence            89999999999998 7721   56677888999886432          4567788766799999873        9999


Q ss_pred             cCCCcccHHHHHHHHHHHhhhc
Q 015283          388 AGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       388 ~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +. +++++++++++|+++++++
T Consensus       404 ~~-~~e~i~~~l~~l~~~l~~~  424 (427)
T 3dyd_A          404 TV-PEVMMLEACSRIQEFCEQH  424 (427)
T ss_dssp             CS-CHHHHHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHHHHHHHHHHh
Confidence            75 9999999999999998764

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=6.9e-43  Score=343.69  Aligned_cols=339  Identities=14%  Similarity=0.106  Sum_probs=268.9

Q ss_pred             cHHHHHHHHHhhcc--C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCC
Q 015283           54 LDVVKKAENLMLER--G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGA  129 (410)
Q Consensus        54 ~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd  129 (410)
                      |+.+.++..+.+..  + ....|.+..|..++|+++++++.+.+|..+++++|++  |+|+++++.+++.  ..+ .+||
T Consensus       108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~--~l~~~~gd  183 (500)
T 3tcm_A          108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFL--TDGASPGVHLMMQ--LLIRNEKD  183 (500)
T ss_dssp             CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEE--ESSSHHHHHHHHH--HHCCSTTE
T ss_pred             CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEE--cCCHHHHHHHHHH--HHcCCCCC
Confidence            45555555555543  1 3478999999999999999999877777778899999  9999999999843  335 6999


Q ss_pred             EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      .|+++.|+|..+...++..|++++.+++.++++|.+|++.+++.+++.   +.+++++++++|+||||.++|.+++++|+
T Consensus       184 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~  263 (500)
T 3tcm_A          184 GILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIV  263 (500)
T ss_dssp             EEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             EEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHH
Confidence            999999999999999999999999999976667899999999998752   22566777789999999999999999999


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh------cCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHH
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAAR  279 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~  279 (410)
                      ++|++||+++|+||+|..+.+++. ....++..+..      ...++++++|+||.| |++|+|+||+++...++++++.
T Consensus       264 ~la~~~~~~li~Deay~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~  342 (500)
T 3tcm_A          264 KFCKNEGLVLLADEVYQENIYVDN-KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQ  342 (500)
T ss_dssp             HHHHHHTCEEEEECTTTTCBCCTT-CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHH
T ss_pred             HHHHHcCCEEEEecCccccccCCC-CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHH
Confidence            999999999999999999887421 12223322221      223589999999999 8999999998654447787777


Q ss_pred             HHHHHHhhccCcccCCChhHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCC
Q 015283          280 VKSQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQ  354 (410)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~  354 (410)
                      +.....     ...+++..+|.++..++++.    .....|.++.++.+++++++++++.+.|+ ++ |    +.+..++
T Consensus       343 l~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~~g----~~~~~~~  412 (500)
T 3tcm_A          343 IYKIAS-----VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFN-KLEG----ITCNEAE  412 (500)
T ss_dssp             HHHHHH-----TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSTT----EECCCCC
T ss_pred             HHHHHh-----cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCC----cEEecCC
Confidence            655332     34567888888888888742    34455677788999999999999999998 87 4    6788899


Q ss_pred             cceeeecCC--CH-------------H--HHHHhhhcCcEEEcCC-------C----eEEecCCCcccHHHHHHHHHHHh
Q 015283          355 IGMFSFTGL--NK-------------A--QSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       355 ~~~~~~~~~--~~-------------~--~~~~ll~~~gi~v~~~-------g----Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      +++|.|+.+  ..             +  ++.++++++||++.||       |    |++++ .+++++++++++|++++
T Consensus       413 g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~  491 (500)
T 3tcm_A          413 GAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFH  491 (500)
T ss_dssp             BTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHH
T ss_pred             eEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHH
Confidence            999999533  22             1  2457777789999875       2    99998 59999999999999988


Q ss_pred             hh
Q 015283          407 HN  408 (410)
Q Consensus       407 ~~  408 (410)
                      ++
T Consensus       492 ~~  493 (500)
T 3tcm_A          492 EA  493 (500)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=4.5e-44  Score=345.67  Aligned_cols=372  Identities=15%  Similarity=0.095  Sum_probs=288.2

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccCcCCcccHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKV   85 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~a   85 (410)
                      ++++.++...+++.+.++.+...   ++++|+|+.|.+    ..+ +++.+.+++.+.+.... ...|++..|..++|++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~   75 (422)
T 3fvs_A            4 QLQARRLDGIDYNPWVEFVKLAS---EHDVVNLGQGFP----DFP-PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKI   75 (422)
T ss_dssp             CCSCGGGTTCCCCHHHHHHHHHH---TSCCEECCCSSC----SSC-CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHH
T ss_pred             hhHHHHhhccCccHHHHHHHHhh---cCCceEeCCCCC----CCC-CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHH
Confidence            44567788888887666554433   357999999987    333 37899999888775432 3679888899999999


Q ss_pred             HHHHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-----
Q 015283           86 TAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-----  159 (410)
Q Consensus        86 ia~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-----  159 (410)
                      +++++...++..+++ ++|++  |+||++++..++..  .+.+||+|+++.|+|.++...++..|.+++.+++.+     
T Consensus        76 la~~~~~~~g~~~~~~~~i~~--~~g~~~a~~~~~~~--~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  151 (422)
T 3fvs_A           76 LASFFGELLGQEIDPLRNVLV--TVGGYGALFTAFQA--LVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQN  151 (422)
T ss_dssp             HHHHHHHHHTCCCCHHHHEEE--ESHHHHHHHHHHHH--HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCS
T ss_pred             HHHHHHHhhCCCCCCCCcEEE--ECChHHHHHHHHHH--HcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccc
Confidence            999998777777777 68999  99999999998443  377999999999999999999999999999998854     


Q ss_pred             -----CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283          160 -----PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA  234 (410)
Q Consensus       160 -----~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~  234 (410)
                           .+++.+|++.+++.+++   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++.  ..
T Consensus       152 G~~~~~~~~~~d~~~l~~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~  226 (422)
T 3fvs_A          152 GELGSSSNWQLDPMELAGKFTS---RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH--QH  226 (422)
T ss_dssp             SSCCBGGGSBCCHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CC
T ss_pred             cccccccCCCCCHHHHHhhcCC---CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC--CC
Confidence                 13567899999988864   677788899999999999999999999999999999999999999886532  12


Q ss_pred             hHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhh-H
Q 015283          235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPAL-F  313 (410)
Q Consensus       235 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~-~  313 (410)
                      .++..+....++++++.|+||.+|++|+|+||+++   ++++++.+....    .....+++..++.++...|++... .
T Consensus       227 ~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~  299 (422)
T 3fvs_A          227 ISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG---PDHIMKHLRTVH----QNSVFHCPTQSQAAVAESFEREQLLF  299 (422)
T ss_dssp             CCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEEC---CHHHHHHHHHHH----HTTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CChhhcccccCcEEEEecchhccCCccceEEEEEe---CHHHHHHHHHHH----hhccCCCCcHHHHHHHHHHhhccccc
Confidence            22223322346899999999999999999999744   777666654422    222335667777777666653100 0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCH------------------HHHHHhhhcC
Q 015283          314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK------------------AQSDNMTNKW  375 (410)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~ll~~~  375 (410)
                      ..+.+++++.+++++++++++.+.|+ +.|    +.+..+.+++|+|+.+..                  +++..+++++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  374 (422)
T 3fvs_A          300 RQPSSYFVQFPQAMQRCRDHMIRSLQ-SVG----LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNK  374 (422)
T ss_dssp             TCTTCHHHHHHHHHHHHHHHHHHHHH-TTT----CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHH-HcC----CeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhc
Confidence            00123457888999999999999999 876    466778899999986521                  4567778778


Q ss_pred             cEEEcCC-------------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          376 HVYMTKD-------------G--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       376 gi~v~~~-------------g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ||.+.||             +  ||+++. +++++++++++|++++++
T Consensus       375 gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          375 GLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             CEECEEGGGGSCHHHHTTSCSEEEEECCC-CHHHHHHHHHHHHHHHHC
T ss_pred             CEEEeCcHHhcCCcCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence            9998873             2  999987 999999999999999875

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=4.6e-43  Score=334.91  Aligned_cols=367  Identities=17%  Similarity=0.173  Sum_probs=283.3

Q ss_pred             cccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283            9 RFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      .++++...+++.+..+.+.+.+.  +++|+|+.|.+    ..+ .++.+.+++.+.+.... ..|++..|..++|+++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~   74 (389)
T 1gd9_A            3 LSDRLELVSASEIRKLFDIAAGM--KDVISLGIGEP----DFD-TPQHIKEYAKEALDKGL-THYGPNIGLLELREAIAE   74 (389)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHTC--SSCEECCCCSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHH
T ss_pred             hhhHhHhCChhHHHHHHHHHhhh--cCeEecCCCCC----CCC-CCHHHHHHHHHHHhCCC-CCCCCCCCcHHHHHHHHH
Confidence            34455666777777766666544  57899999986    222 36889998888775543 578877899999999999


Q ss_pred             HhcCCCCCcccCCc-eEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283           89 LLFGADNSVLKEQR-VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF  167 (410)
Q Consensus        89 ~~~~~~~~~~~~~~-i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  167 (410)
                      ++...+|..+++++ +++  ++||++++.++..  ..+.+||+|++++|+|.++...++..|.+++.+++.+++++.+|+
T Consensus        75 ~~~~~~g~~~~~~~~v~~--~~g~~~a~~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  150 (389)
T 1gd9_A           75 KLKKQNGIEADPKTEIMV--LLGANQAFLMGLS--AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNV  150 (389)
T ss_dssp             HHHHHHCCCCCTTTSEEE--ESSTTHHHHHHHT--TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCH
T ss_pred             HHHHHhCCCCCCCCeEEE--cCChHHHHHHHHH--HhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCH
Confidence            98665565566788 999  9999999999843  336699999999999999999999999999999885434577899


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +.+++.+++   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+.+.  ...++..+....+++
T Consensus       151 ~~l~~~l~~---~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~  225 (389)
T 1gd9_A          151 DELKKYVTD---KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDA--RHYSIASLDGMFERT  225 (389)
T ss_dssp             HHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTCGGGE
T ss_pred             HHHHHhcCc---CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CCCCHhhccCCCCCE
Confidence            999999875   567777799999999999999999999999999999999999999886421  011222221123579


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      ++++|+||.+|++|+|+||+++   ++++++++...    ......+++..++.++...|++...    .+++++.++++
T Consensus       226 i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~  294 (389)
T 1gd9_A          226 ITVNGFSKTFAMTGWRLGFVAA---PSWIIERMVKF----QMYNATCPVTFIQYAAAKALKDERS----WKAVEEMRKEY  294 (389)
T ss_dssp             EEEEESTTTTTCGGGCCEEEEC---CHHHHHHHHHH----HTTTTCSCCHHHHHHHHHHHTCHHH----HHHHHHHHHHH
T ss_pred             EEEecChhhcCCcccceEEEEE---CHHHHHHHHHH----HhhhccCCCHHHHHHHHHHHhCCCc----chHHHHHHHHH
Confidence            9999999999999999999854   67766655442    2223345677788888778876421    12567888999


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCC
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLS  391 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~  391 (410)
                      +++++++.+.|+ ++|    +.+..+.+++|+|+.+     +. ++...+++++||.+.|+        +  ||+++. +
T Consensus       295 ~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~  368 (389)
T 1gd9_A          295 DRRRKLVWKRLN-EMG----LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-A  368 (389)
T ss_dssp             HHHHHHHHHHHH-HTT----CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-C
T ss_pred             HHHHHHHHHHHH-HcC----CeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-C
Confidence            999999999998 776    4666677888888754     33 44666664679999875        2  999987 9


Q ss_pred             cccHHHHHHHHHHHhhhc
Q 015283          392 LAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++++|++++++.
T Consensus       369 ~~~i~~~l~~l~~~~~~~  386 (389)
T 1gd9_A          369 YEKLEEAMDRMERVLKER  386 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999998764

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-43  Score=343.11  Aligned_cols=359  Identities=16%  Similarity=0.126  Sum_probs=276.5

Q ss_pred             CCCCCcccchhHhhhc------CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           16 APPDPILGVSEAFKAD------TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        16 ~~~~~~~~~~~~~~~~------~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      .+++.+..+.+.....      .++++|||+.|.+    ..+ .++.+.+++.+++.......|++..|.+++|++++++
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~  107 (447)
T 3b46_A           33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFF----SYS-PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKL  107 (447)
T ss_dssp             CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSC----SSC-CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHH
T ss_pred             cCccHHHHHHHHHHhhccchhccCCCeEEccCCCC----CCC-CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHH
Confidence            4555454454444221      4467999999987    222 2688999988887542236798888999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC--------
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------  161 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------  161 (410)
                      +.+.++..+++++|++  |+||++++.+++.  ..+.+||+|++++|+|..+...++..|.+++.+++.+++        
T Consensus       108 l~~~~g~~~~~~~v~~--t~G~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~  183 (447)
T 3b46_A          108 YSPIYNTELKAENVTV--TTGANEGILSCLM--GLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTR  183 (447)
T ss_dssp             HTTTTTSCCCGGGEEE--ESHHHHHHHHHHH--HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBC
T ss_pred             HHHhcCCCCChhhEEE--eCCHHHHHHHHHH--HHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCcccccccccc
Confidence            9887777777889999  9999999999843  347799999999999999999999999999999985432        


Q ss_pred             --CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          162 --TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       162 --~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                        ++.+|++.+++.+++   +++++++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++   ...++..
T Consensus       184 ~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~  257 (447)
T 3b46_A          184 GEEWTIDFEQFEKAITS---KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD---SFTRIAT  257 (447)
T ss_dssp             STTSEECHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS---CCCCGGG
T ss_pred             ccCcccCHHHHHHhhcc---CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC---CCcCHHH
Confidence              578999999988864   67777788999999999999999999999999999999999999988653   1112222


Q ss_pred             H-hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283          240 F-ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA  318 (410)
Q Consensus       240 ~-~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~  318 (410)
                      + .+..++++++.|+||.++++|+|+||+  ++.++++++.+.....    ....+++...|.++...|++..    ..+
T Consensus       258 ~~~~~~~~~i~i~S~sK~~~~~G~riG~~--~~~~~~l~~~l~~~~~----~~~~~~~~~~~~a~~~aL~~~~----~~~  327 (447)
T 3b46_A          258 LSPEIGQLTLTVGSAGKSFAATGWRIGWV--LSLNAELLSYAAKAHT----RICFASPSPLQEACANSINDAL----KIG  327 (447)
T ss_dssp             SCHHHHTTEEEEEEHHHHTTCTTSCCEEE--ECSCHHHHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHHH----HHT
T ss_pred             cCCCCCCcEEEEecCchhcCCcchhhEEE--EeCCHHHHHHHHHHHh----hccCCCChHHHHHHHHHHhCCc----chH
Confidence            2 123358999999999999999999997  4436776666554322    1223466777777766665431    134


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-------------------H-HHHHHhhhcCcEE
Q 015283          319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-------------------K-AQSDNMTNKWHVY  378 (410)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~ll~~~gi~  378 (410)
                      ++++.+++++++++++.+.|+ ++|    +.+..+.+++|+|+.+.                   . +++.++++++||.
T Consensus       328 ~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~  402 (447)
T 3b46_A          328 YFEKMRQEYINKFKIFTSIFD-ELG----LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVV  402 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHT----CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HCC----CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEE
Confidence            467889999999999999999 887    46667888999887542                   1 4566777668999


Q ss_pred             EcCC-------------C--eEEecCCCcccHHHHHHHHHHH
Q 015283          379 MTKD-------------G--RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       379 v~~~-------------g--Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      +.|+             +  ||+++. +++++++++++|++.
T Consensus       403 v~pg~~f~~~~~~~~~~~~iRls~~~-~~e~l~~~~~~l~~~  443 (447)
T 3b46_A          403 AIPPTEFYIKEHEKAAENLLRFAVCK-DDAYLENAVERLKLL  443 (447)
T ss_dssp             CBCGGGGSCGGGGGGGTTEEEEECCS-CHHHHHHHHHHGGGG
T ss_pred             EECchHhCCCCccCCCCCEEEEEEeC-CHHHHHHHHHHHHHH
Confidence            9874             2  999987 899999999999874

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=4.4e-43  Score=335.35  Aligned_cols=356  Identities=18%  Similarity=0.149  Sum_probs=272.9

Q ss_pred             CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      +++..+++++..+.....+  ..++++|||+.|.+    ..+ +++.+.+++.+.+.... ..|++..|..++|++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~   80 (391)
T 3h14_A            7 SRSAVDPFIVMDVMEAARRAEEAGRRIIHMEVGQP----GTG-APRGAVEALAKSLETDA-LGYTVALGLPALRQRIARL   80 (391)
T ss_dssp             STTCCCCCTTHHHHHHHHHHHHTTCCCEECCCSSC----SSC-SCHHHHHHHHHHHC-----------CCHHHHHHHHHH
T ss_pred             hHhhcCcchHHHHHHHHHHHHhcCCCeEEccCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHHH
Confidence            7777777777666554433  23468999999987    333 37889999988876544 7798888999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      +.+.++..+++++|++  |+||++++.+++.  ..+.+||+|+++.|+|..+...++..|.+++.+++.++.++.+|++.
T Consensus        81 ~~~~~g~~~~~~~v~~--t~g~~~al~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  156 (391)
T 3h14_A           81 YGEWYGVDLDPGRVVI--TPGSSGGFLLAFT--ALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPAD  156 (391)
T ss_dssp             HHHHHCCCCCGGGEEE--ESSHHHHHHHHHH--HHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHH
T ss_pred             HHHHhCCCCCHHHEEE--ecChHHHHHHHHH--HhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence            9877777777899999  9999999999843  34679999999999999999999999999999998655567789988


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +++.      +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++..   ...   ....+++++
T Consensus       157 l~~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~---~~~---~~~~~~~i~  224 (391)
T 3h14_A          157 FAGL------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKA---VTA---LELTDECYV  224 (391)
T ss_dssp             HTTS------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC---CCG---GGTCSSSEE
T ss_pred             HHhc------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCC---cCh---hhcCCCEEE
Confidence            8765      3445566899999999999999999999999999999999999998865321   111   223568999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ++|+||.+|++|+|+||+++   ++++++.+.....    ....+++.+++.++...|...       +++++.++++++
T Consensus       225 ~~s~sK~~g~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~  290 (391)
T 3h14_A          225 INSFSKYFSMTGWRVGWMVV---PEDQVRVVERIAQ----NMFICAPHASQVAALAALDCD-------AELQANLDVYKA  290 (391)
T ss_dssp             EEESSSTTCCTTSCCEEEEC---CGGGHHHHHHHHH----HTTCCCCHHHHHHHHHHTTCH-------HHHHHHHHHHHH
T ss_pred             EEechhccCCccceeEEEEe---CHHHHHHHHHHHh----hhccCCCHHHHHHHHHHhCCh-------HHHHHHHHHHHH
Confidence            99999999999999999754   7776666554332    233467777777776777632       345788899999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC---------C--eEEecCCCc
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD---------G--RISLAGLSL  392 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~---------g--Ris~~~~~~  392 (410)
                      +++.+.+.|+ +.+.   .....+.+++|+|+.+     +. ++..++++++||.+.||         +  ||+++. ++
T Consensus       291 ~~~~l~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~  365 (391)
T 3h14_A          291 NRKLMLERLP-KAGF---TRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-AT  365 (391)
T ss_dssp             HHHHHHHHHH-HHTC---CCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CH
T ss_pred             HHHHHHHHHH-HcCC---CcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CH
Confidence            9999999998 8863   2335677788888643     33 45677777679999874         1  999987 89


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++|++++++
T Consensus       366 ~~i~~~l~~l~~~~~~  381 (391)
T 3h14_A          366 ADIEEGLDRLEAFMQA  381 (391)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999999875

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=7.8e-43  Score=333.24  Aligned_cols=369  Identities=16%  Similarity=0.146  Sum_probs=282.0

Q ss_pred             ccccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283            8 SRFEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV   85 (410)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a   85 (410)
                      +.+.+++..+++++..+...+.+.  .++++|+|+.|.+    ..+ .++.+.+++.+.+.... ..|++..|..++|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~   75 (388)
T 1j32_A            2 KLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEP----DFN-TPKHIVEAAKAALEQGK-TRYGPAAGEPRLREA   75 (388)
T ss_dssp             CCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred             chhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence            334456667777777777655542  2357899999987    222 36888888888775443 679888899999999


Q ss_pred             HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      +++++...++..+++++|++  ++||++++.++...  .+.+||+|++++|+|..+...++..|.+++.+++.+++++.+
T Consensus        76 la~~~~~~~g~~~~~~~v~~--~~g~~~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~  151 (388)
T 1j32_A           76 IAQKLQRDNGLCYGADNILV--TNGGKQSIFNLMLA--MIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKV  151 (388)
T ss_dssp             HHHHHHHHHCCCCCGGGEEE--ESHHHHHHHHHHHH--HCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCC
T ss_pred             HHHHHHHhcCCCCChhhEEE--cCCHHHHHHHHHHH--hcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCC
Confidence            99998766666666889999  99999999998443  367999999999999999999999999999998854446788


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cC
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RG  244 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~  244 (410)
                      |++.+++.+++   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++..  ..++..+.. ..
T Consensus       152 d~~~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~  226 (388)
T 1j32_A          152 SPEQIRQAITP---KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQ--HLSIGAASPEAY  226 (388)
T ss_dssp             CHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCHHHH
T ss_pred             CHHHHHHhcCc---CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCC--CCCHHHcccccc
Confidence            99999999874   6777778999999999999999999999999999999999999998864211  111111111 13


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA  324 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~  324 (410)
                      ++++++.|+||.+|++|+|+||+++   ++++++.+...    ......+++.+++.++...|+..      .+++++.+
T Consensus       227 ~~~~~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~  293 (388)
T 1j32_A          227 ERSVVCSGFAKTYAMTGWRVGFLAG---PVPLVKAATKI----QGHSTSNVCTFAQYGAIAAYENS------QDCVQEML  293 (388)
T ss_dssp             HTEEEEEESTTTTTCTTTCCEEEEC---CHHHHHHHHHH----HHTTTCSCCHHHHHHHHHHHHSC------SHHHHHHH
T ss_pred             CCEEEEeechhccCCcccceEEEEe---CHHHHHHHHHH----HhhcccCCCHHHHHHHHHHHhCC------cHHHHHHH
Confidence            4789999999999999999999854   77766655443    22233456777777776666532      12346788


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC------C--eEEecCC
Q 015283          325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD------G--RISLAGL  390 (410)
Q Consensus       325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~  390 (410)
                      ++++++++++.+.|+ +++.   +.+..+.+++|.|+.+     +. ++...+++++||.+.|+      +  ||+++. 
T Consensus       294 ~~~~~~~~~l~~~L~-~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~-  368 (388)
T 1j32_A          294 AAFAERRRYMLDALN-AMPG---LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT-  368 (388)
T ss_dssp             HHHHHHHHHHHHHHH-TCTT---CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS-
T ss_pred             HHHHHHHHHHHHHHh-hCCC---CcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecC-
Confidence            889999999999998 7721   4666777888888744     33 34566766569999875      2  999985 


Q ss_pred             CcccHHHHHHHHHHHhhhc
Q 015283          391 SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++++|+++++++
T Consensus       369 ~~~~i~~~~~~l~~~l~~~  387 (388)
T 1j32_A          369 DLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998764

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.6e-43  Score=338.31  Aligned_cols=376  Identities=13%  Similarity=0.126  Sum_probs=266.5

Q ss_pred             CccceecccccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcc
Q 015283            1 MVAAVNVSRFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEG   78 (410)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g   78 (410)
                      |...+-|..+.++...+++.+..+.....+  ..+.++|||+.|.+    ..+ .++.+.+++.+.+.......|++..|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g   76 (412)
T 2x5d_A            2 MAESRPARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNP----DGP-TPPHIVEKLCTVAQREDTHGYSTSRG   76 (412)
T ss_dssp             -------------------CHHHHHHHHHHHHHTTCCCEECSSCCC----CSC-CCHHHHHHHHHTC---------CTTC
T ss_pred             CccccccchhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            455667777777777777766554443331  22457899999986    222 36899999988875532367887889


Q ss_pred             cHHHHHHHHHHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283           79 LAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY  157 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~  157 (410)
                      ..++|+++++++...+|..+++ ++|++  ++||++++.+++..  .+.+||+|+++.|+|..+...++..|.+++.+++
T Consensus        77 ~~~l~~~ia~~~~~~~g~~~~~~~~v~~--t~g~~~a~~~~~~~--~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  152 (412)
T 2x5d_A           77 IPRLRRAISHWYRDRYDVQIDPESEAIV--TIGSKEGLAHLMLA--TLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPL  152 (412)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCCTTTSEEE--ESCHHHHHHHHHHH--HCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEEC
T ss_pred             cHHHHHHHHHHHHHHhCCCCCCCcCEEE--cCChHHHHHHHHHH--hCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeec
Confidence            9999999999986655655566 69999  99999999998443  3679999999999999999999999999999988


Q ss_pred             ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh
Q 015283          158 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV  237 (410)
Q Consensus       158 ~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~  237 (410)
                      .+++++.+|++.+++.+..   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|..+.+.+.  ...++
T Consensus       153 ~~~~~~~~d~~~l~~~i~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~  227 (412)
T 2x5d_A          153 VPGIDFFNELERAIRESIP---KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGW--KAPSI  227 (412)
T ss_dssp             STTSCHHHHHHHHHHTEES---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCG
T ss_pred             CCccCCCCCHHHHHHhccc---CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCh
Confidence            5433566889999988864   455666689999999999999999999999999999999999999886321  11122


Q ss_pred             HHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283          238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK  317 (410)
Q Consensus       238 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~  317 (410)
                      ..+....+++++++|+||.+|++|+|+||+++   ++++++.+.....    ....+++.+++.++...|++..      
T Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~~------  294 (412)
T 2x5d_A          228 MQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVG---NPELVSALARIKS----YHDYGTFTPLQVAAIAALEGDQ------  294 (412)
T ss_dssp             GGSTTGGGTEEEEEECC-CCSCTTSCCEEEEE---CHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHSCS------
T ss_pred             hhccCccCcEEEEecCccccCCcccceEEEEc---CHHHHHHHHHHHh----hhccCCCHHHHHHHHHHHhCCH------
Confidence            22211235899999999999999999999865   7887666654322    1223566777777777776531      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------CH-HHHHHhhhcCcEEEcCC-------
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NK-AQSDNMTNKWHVYMTKD-------  382 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~ll~~~gi~v~~~-------  382 (410)
                      +++++.+++++++++++.+.|+ +.+    +.+..+.+++|+|+.+       +. ++...+++++||.+.|+       
T Consensus       295 ~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~  369 (412)
T 2x5d_A          295 QCVRDIARQYQQRRDVLVKGLR-EAG----WMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYG  369 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-HHT----CCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HCC----CEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCC
Confidence            2356788899999999999998 776    4666777888888754       23 34666766679999875       


Q ss_pred             -C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          383 -G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 -g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       +  ||+++. +++++++++++|++++++.
T Consensus       370 ~~~iRis~~~-~~~~l~~~l~~l~~~l~~~  398 (412)
T 2x5d_A          370 DDHVRFALIE-NRDRLRQAVRGIKAMFRAD  398 (412)
T ss_dssp             TTEEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence             2  999987 8999999999999998653

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=2.2e-43  Score=339.52  Aligned_cols=366  Identities=13%  Similarity=0.069  Sum_probs=281.2

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      ++++...+++.+..+.+.   ..++++|+|+.|.+    ..+ .++.+.+++.+.+.......|++..|..++|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~---~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~   73 (410)
T 3e2y_A            2 AKRIEGLDSNVWVEFTKL---AADPSVVNLGQGFP----DIS-PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCL   73 (410)
T ss_dssp             CGGGTTCCCCHHHHTTTT---TTSTTSEECSSCCC----CSC-CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHH
T ss_pred             chhhccCCccHHHHHHHH---hcCCCeEEecCCCC----CCC-CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHH
Confidence            345666777765554432   23467999999987    433 3799999998887654346798888999999999999


Q ss_pred             hcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec---------
Q 015283           90 LFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD---------  159 (410)
Q Consensus        90 ~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---------  159 (410)
                      +...++..+++ ++|++  ++||++++..++.  ..+.+||+|+++.|+|..+...++..|.+++.+++..         
T Consensus        74 ~~~~~~~~~~~~~~i~~--~~g~~~a~~~~~~--~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~  149 (410)
T 3e2y_A           74 YGKIYQRQIDPNEEILV--AVGAYGSLFNSIQ--GLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWT  149 (410)
T ss_dssp             HHHHHTSCCCTTTSEEE--ESHHHHHHHHHHH--HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCB
T ss_pred             HHHHhCCCCCCCCCEEE--eCCcHHHHHHHHH--HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecccccccccccc
Confidence            98767777777 79999  9999999999843  3367999999999999999999999999999998752         


Q ss_pred             CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283          160 PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL  239 (410)
Q Consensus       160 ~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  239 (410)
                      ..++.+|++.+++.+++   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+.  ...++..
T Consensus       150 ~~~~~~d~~~l~~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~  224 (410)
T 3e2y_A          150 SSDWTFDPRELESKFSS---KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH--THVKIAT  224 (410)
T ss_dssp             GGGEECCHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGG
T ss_pred             ccCCcCCHHHHHhhcCC---CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC--CCCCHHH
Confidence            24567899999988864   677778899999999999999999999999999999999999999886532  1222323


Q ss_pred             HhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh-hhHHHHHH
Q 015283          240 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP-ALFDEWKA  318 (410)
Q Consensus       240 ~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~-~~~~~~~~  318 (410)
                      +....++++++.|+||.+|++|+|+||+++   ++++++.+...    ......+++..++.++...|.+. .....+.+
T Consensus       225 ~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  297 (410)
T 3e2y_A          225 LPGMWERTITIGSAGKTFSVTGWKLGWSIG---PAHLIKHLQTV----QQNSFYTCATPLQAALAEAFWIDIKRMDDPEC  297 (410)
T ss_dssp             STTCGGGEEEEEEHHHHSSCGGGCCEEEEC---CHHHHHHHHHH----HHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred             cCCccCeEEEEecchhhcCCCCceEEEEEE---CHHHHHHHHHH----HHhhccCCChHHHHHHHHHHHhhhccccchHH
Confidence            333346899999999999999999999754   77766665433    22233456777777776666520 00000123


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----------------HHHHHHhhhcCcEEEcCC
Q 015283          319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------------KAQSDNMTNKWHVYMTKD  382 (410)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ll~~~gi~v~~~  382 (410)
                      ++++.+++++++++++.+.|+ ++|    +.+..+.+++|+|+.+.                .+++.++++++||.+.||
T Consensus       298 ~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  372 (410)
T 3e2y_A          298 YFNSLPKELEVKRDRMVRLLN-SVG----LKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPV  372 (410)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TTT----CEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEG
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HCC----CeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCc
Confidence            457888999999999999999 876    46677889999887441                156777887789999774


Q ss_pred             -------------C--eEEecCCCcccHHHHHHHHHHH
Q 015283          383 -------------G--RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       383 -------------g--Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                                   +  ||+++. +++++++++++|+++
T Consensus       373 ~~f~~~~~~~~~~~~iRis~~~-~~e~l~~~l~~l~~~  409 (410)
T 3e2y_A          373 SAFCDSKSKPHFEKLVRFCFIK-KDSTLDAAEEIFRAW  409 (410)
T ss_dssp             GGGSCTTTHHHHTTEEEEECCC-CHHHHHHHHHHHHTC
T ss_pred             hhhCCCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHhc
Confidence                         2  999987 999999999999763

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=2.7e-42  Score=330.34  Aligned_cols=354  Identities=15%  Similarity=0.141  Sum_probs=276.1

Q ss_pred             CCCCCCcccchhHhhh---cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc
Q 015283           15 MAPPDPILGVSEAFKA---DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF   91 (410)
Q Consensus        15 ~~~~~~~~~~~~~~~~---~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~   91 (410)
                      ..++.++..+.+....   +.++++|||+.|.+    ..+ .++.+.+++.+.+..  ...|++..|..++|+++++++.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~   80 (396)
T 3jtx_A            8 QLKPYPFARLHEAMQGISAPEGMEAVPLHIGEP----KHP-TPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLK   80 (396)
T ss_dssp             HCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSC----CSC-CCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHH
T ss_pred             cCCCChHHHHHHHHHhhhhccCCCeEEeCCcCC----CCC-CCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHH
Confidence            3445555454443333   33568999999987    333 378999999887753  3779888899999999999997


Q ss_pred             CCCCCc-ccCC-ceEEEecCChhhHHHHHHHHHHHhCCC-----CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283           92 GADNSV-LKEQ-RVATVQGLSGTGSLRLAAALIERYFPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG  164 (410)
Q Consensus        92 ~~~~~~-~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~  164 (410)
                      +.++.. ++++ +|++  |+|+++++.+++.  ..+.+|     |+|+++.|+|..+...++..|.+++.+++ +++++.
T Consensus        81 ~~~g~~~~~~~~~i~~--t~g~~~al~~~~~--~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~  155 (396)
T 3jtx_A           81 RRYDGLTVDADNEILP--VLGSREALFSFVQ--TVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFN  155 (396)
T ss_dssp             HHTTTCCCCTTTSEEE--ESSHHHHHHHHHH--HHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCC
T ss_pred             HhcCCCCCCCCCeEEE--cCCcHHHHHHHHH--HHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCc
Confidence            777766 6688 9999  9999999999843  336686     79999999999999999999999999998 566778


Q ss_pred             cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH-H---
Q 015283          165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL-F---  240 (410)
Q Consensus       165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~---  240 (410)
                      +|++.+++.+.+   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+.  ...+... .   
T Consensus       156 ~d~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~  230 (396)
T 3jtx_A          156 PDWRSISEEVWK---RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN--KPLGCLQAAAQL  230 (396)
T ss_dssp             CCGGGSCHHHHH---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC--CCCCHHHHHHHT
T ss_pred             cCHHHHHHhhcc---CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCchHHhhhhhc
Confidence            899999999886   677777789999999999999999999999999999999999999886531  1111111 1   


Q ss_pred             hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM  320 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  320 (410)
                      ....++++++.|+||.++++|+|+||++.   ++++++.+.....    ....+++..++.++...|++.       +++
T Consensus       231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~-------~~~  296 (396)
T 3jtx_A          231 GRSRQKLLMFTSLSKRSNVPGLRSGFVAG---DAELLKNFLLYRT----YHGSAMSIPVQRASIAAWDDE-------QHV  296 (396)
T ss_dssp             TCCCTTEEEEEESTTTSSCGGGCCEEEEE---CHHHHHHHHHHHH----HHTCCCCHHHHHHHHHHHHCC-------HHH
T ss_pred             ccccCcEEEEeccccccCCcccceEEEEe---CHHHHHHHHHHHh----hcccCCCHHHHHHHHHHhCCH-------HHH
Confidence            11357899999999999999999999754   8887666654322    223356777778777777653       235


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----HHHHHHhhhcCcEEEcCC--------------
Q 015283          321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKD--------------  382 (410)
Q Consensus       321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~--------------  382 (410)
                      ++.+++++++++.+.+.|+ +..     .+..+.+++|+|+.+.    .+++.++++++||.+.||              
T Consensus       297 ~~~~~~~~~~~~~l~~~l~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~  370 (396)
T 3jtx_A          297 IDNRRLYQEKFERVIPILQ-QVF-----DVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGE  370 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHT-TTS-----CCCCCSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTT
T ss_pred             HHHHHHHHHHHHHHHHHHH-hcC-----CccCCCeeEEEEEECCCCCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCC
Confidence            6888899999999999998 652     4456778999988653    455777777779999763              


Q ss_pred             C--eEEecCCCcccHHHHHHHHHHHh
Q 015283          383 G--RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       383 g--Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      +  ||+++. +++++++++++|++++
T Consensus       371 ~~iRis~~~-~~~~i~~~l~~l~~~l  395 (396)
T 3jtx_A          371 GYVRIALVA-DVATCVKAAEDIVSLY  395 (396)
T ss_dssp             TEEEEECCS-CHHHHHHHHHHHHHHC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence            2  999987 9999999999999876

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=5.3e-43  Score=335.55  Aligned_cols=365  Identities=17%  Similarity=0.189  Sum_probs=275.7

Q ss_pred             cccccCCCCC--CCCCcccchhHhh---hc-CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---CccCcCCc
Q 015283            7 VSRFEGVTMA--PPDPILGVSEAFK---AD-TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIE   77 (410)
Q Consensus         7 ~~~~~~~~~~--~~~~~~~~~~~~~---~~-~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~   77 (410)
                      |+.++++...  .++.+.++.....   .. .++++|||+.|.+    ..+ .++.+.+++.+.+....   ...|++..
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~~y~~~~   76 (398)
T 3ele_A            2 MVVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNP----SIP-APQIVNDTIKELVTDYDSVALHGYTSAQ   76 (398)
T ss_dssp             CSSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCC----CSC-CCHHHHHHHHHHHHHSCHHHHHSCCCTT
T ss_pred             cchhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCC----CCC-CCHHHHHHHHHHHhcCCccccCCcCCCC
Confidence            4445555554  3555555433322   21 2257899999976    322 36889999888775421   26798889


Q ss_pred             ccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283           78 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYR  156 (410)
Q Consensus        78 g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~  156 (410)
                      |..++|+++++++.+.++..+++++|++  |+||++++..++..  .+.+| |+|++++|+|..+...++..|.+++.++
T Consensus        77 g~~~lr~~la~~l~~~~g~~~~~~~i~~--~~g~~~al~~~~~~--l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~  152 (398)
T 3ele_A           77 GDVETRAAIAEFLNNTHGTHFNADNLYM--TMGAAASLSICFRA--LTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVP  152 (398)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESSHHHHHHHHHHH--HCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEEC
T ss_pred             CcHHHHHHHHHHHHHHhCCCCChHHEEE--ccCHHHHHHHHHHH--HcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEe
Confidence            9999999999999877777777899999  99999999998443  37799 9999999999999999999999999999


Q ss_pred             eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH------cCCcccccccCCCCCCCCC
Q 015283          157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~------~~~~li~Deay~~~~~~~~  230 (410)
                      +. .+++.+|++++++.+++   +++++++++|+||||.+++.+++++|+++|++      ||+++|+||+|.++.+++.
T Consensus       153 ~~-~~~~~~d~~~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~  228 (398)
T 3ele_A          153 AD-TEHFQIDFDALEERINA---HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGI  228 (398)
T ss_dssp             CC-TTTSSCCHHHHHHTCCT---TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTC
T ss_pred             cC-CcCCcCCHHHHHHHhCc---CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCC
Confidence            84 34678999999998865   67788889999999999999999999999999      9999999999999886531


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHH--HHHHHHHhhccC-cccCCChhHHHHHHHHh
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA--RVKSQLKRLARP-MYSNPPVHGARIVANVV  307 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~a~~~l  307 (410)
                      ..   +  ......+++++++|+||.+|++|+|+||+++   ++++.+  .+...+...... .+.+++.+++.++...+
T Consensus       229 ~~---~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  300 (398)
T 3ele_A          229 KV---P--FVTKYYDNTLVCYSYSKSLSLPGERIGYVLV---PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQ  300 (398)
T ss_dssp             CC---C--CGGGTCSSEEEEEESTTTSSCTTTCCEEEEC---CTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCT
T ss_pred             Cc---C--ChHhhcCCeEEEEehhhcCCCccceeEEEEE---cchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHh
Confidence            11   1  1223456899999999999999999999843   444322  233333222222 23466777777777777


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC-
Q 015283          308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG-  383 (410)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g-  383 (410)
                      ++..           .+++++++++++.+.|+ +++    +.+..+.+++|+|+.+   +.+.+.+.+.++||.+.||. 
T Consensus       301 ~~~~-----------~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~  364 (398)
T 3ele_A          301 GATG-----------DINAYKENRDLLYEGLT-RIG----YHCFKPDGAFYMFVKALEDDSNAFCEKAKEEDVLIVAADG  364 (398)
T ss_dssp             TCCC-----------CHHHHHHHHHHHHHHHH-HHT----CCEECCSBSSEEEEECSSSCHHHHHHHHHTTTEECEESGG
T ss_pred             cCHH-----------HHHHHHHHHHHHHHHHH-HcC----CeecCCCeeEEEEEEcCCCCHHHHHHHHHHCCEEEeCccc
Confidence            6542           34677888899999998 876    4667788898888865   34444444556799998862 


Q ss_pred             -------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          384 -------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 -------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                             ||+++. +++++++++++|+++++++
T Consensus       365 ~~~~~~iRis~~~-~~e~i~~~l~~l~~~l~~~  396 (398)
T 3ele_A          365 FGCPGWVRISYCV-DREMIKHSMPAFEKIYKKY  396 (398)
T ss_dssp             GTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence                   999975 9999999999999998764

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.3e-41  Score=334.19  Aligned_cols=339  Identities=17%  Similarity=0.185  Sum_probs=259.7

Q ss_pred             HHHHHHHHHhhcc---CCCccCcCCcccHHHHHHHHHHhcCCC-CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC-
Q 015283           55 DVVKKAENLMLER---GENKEYLPIEGLAAFNKVTAELLFGAD-NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA-  129 (410)
Q Consensus        55 ~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~aia~~~~~~~-~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd-  129 (410)
                      ..+.+++.+++..   .....|++..|.+++|+++++++.+.+ |.++++++|++  |+|+++++.+++.+  .+.+|| 
T Consensus       104 ~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~--t~G~~~ai~~~~~~--l~~~gd~  179 (498)
T 3ihj_A          104 EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYL--TTGASDGISTILKI--LVSGGGK  179 (498)
T ss_dssp             HHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEE--ESSHHHHHHHHHHH--HCCCCGG
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEE--cCCHHHHHHHHHHH--HcCCCCC
Confidence            3444444555432   123679999999999999999998777 47778899999  99999999998443  366765 


Q ss_pred             ---EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC--CcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283          130 ---KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG--GSFILLHGCAHNPTGIDPTPEQWEK  204 (410)
Q Consensus       130 ---~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~--~~~~ii~~~p~NPtG~~~~~~~l~~  204 (410)
                         .|+++.|+|+.|...++..|++++.+++.++++|.+|++++++.+++.+.  +++++++++|+||||.++|.+++++
T Consensus       180 ~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~  259 (498)
T 3ihj_A          180 SRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIED  259 (498)
T ss_dssp             GSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             CCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHH
Confidence               99999999999999999999999999997667889999999999876221  3677777899999999999999999


Q ss_pred             HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-------cCCcEEEEecccccc-cccCCCcceEEEEeCCchh
Q 015283          205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDL  276 (410)
Q Consensus       205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~  276 (410)
                      |+++|++||++||+||+|..+.+++. ....++..+..       ...++++++||||.+ |++|+|+||++++..++++
T Consensus       260 i~~la~~~~~~li~De~y~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l  338 (498)
T 3ihj_A          260 VIHFAWEEKLFLLADEVYQDNVYSPD-CRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEI  338 (498)
T ss_dssp             HHHHHHHHTCEEEEECTTTTCBCCTT-CCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHH
T ss_pred             HHHHHHHcCcEEEEEcCccccccCCC-CCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHH
Confidence            99999999999999999999987531 12223333322       123589999999999 8899999998644468887


Q ss_pred             HHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          277 AARVKSQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++.+.....     .+.+++..+|.++..++++.    .....|.++..+.+++++++++++.+.|. +++  + +.+..
T Consensus       339 ~~~l~~~~~-----~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~~--g-~~~~~  409 (498)
T 3ihj_A          339 KGQLVKLLS-----VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFN-QVP--G-IHCNP  409 (498)
T ss_dssp             HHHHHHHHH-----HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH-TST--T-EECCC
T ss_pred             HHHHHHHHh-----ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC--C-cEecC
Confidence            776655422     34567788888888888741    23344566677888999999999999998 772  1 67888


Q ss_pred             CCcceeeecCC---------------CHHH--HHHhhhcCcEEEcCC-------C----eEEecCCCcccHHHHHHHHHH
Q 015283          353 RQIGMFSFTGL---------------NKAQ--SDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       353 ~~~~~~~~~~~---------------~~~~--~~~ll~~~gi~v~~~-------g----Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      +++++|.|+.+               +.+.  +.++++++||.+.||       +    |++++. +++++++++++|++
T Consensus       410 p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~-~~e~l~~~i~~L~~  488 (498)
T 3ihj_A          410 LQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILP-PVEKLKTVLQKVKD  488 (498)
T ss_dssp             CCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCS-CHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCC-CHHHHHHHHHHHHH
Confidence            99999999632               2332  577787789999885       1    999964 89999999999999


Q ss_pred             Hhhh
Q 015283          405 SYHN  408 (410)
Q Consensus       405 ~l~~  408 (410)
                      ++++
T Consensus       489 ~~~~  492 (498)
T 3ihj_A          489 FHIN  492 (498)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=1.7e-42  Score=332.57  Aligned_cols=363  Identities=15%  Similarity=0.099  Sum_probs=273.3

Q ss_pred             CCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc
Q 015283           12 GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF   91 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~   91 (410)
                      +++..+++.+..+.......++.++|||+.|.+    ..+ .++.+.+++.+.+.......|++..|..++|+++++++.
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~   99 (404)
T 2o1b_A           25 KLANIPDSYFGKTMGRKIEHGPLPLINMAVGIP----DGP-TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQ   99 (404)
T ss_dssp             HHHTSCCCTTC-------CCCSSCCEECCCCSC----SSC-CCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred             HhhhCCchHHHHHHHHHHhcCCCCEEecCCcCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            344455555555444333333456899999987    222 268899998887744222568777899999999999986


Q ss_pred             CCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH
Q 015283           92 GADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM  170 (410)
Q Consensus        92 ~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  170 (410)
                      +.++.++++ ++|++  ++|+++++.+++..  .+.+||+|++++|+|.++...++..|.+++.+++.+ +++.+|++.+
T Consensus       100 ~~~g~~~~~~~~v~~--t~G~~~al~~~~~~--l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l  174 (404)
T 2o1b_A          100 RQYNVTLDKEDEVCI--LYGTKNGLVAVPTC--VINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKV  174 (404)
T ss_dssp             HHHCCCCCTTTSEEE--ESSHHHHHHHHHHH--HCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGS
T ss_pred             HHhCCCCCCcccEEE--cCCcHHHHHHHHHH--hcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHH
Confidence            655665555 78999  99999999998443  367999999999999999999999999999998843 4667899999


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      ++.+..   +++++++++|+||||.++|.+++++|+++|+++|++||+||+|..+.+++.   ..++..+....++++++
T Consensus       175 ~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~~~~~~i~~  248 (404)
T 2o1b_A          175 DSQIID---KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK---NPSILASENGKDVAIEI  248 (404)
T ss_dssp             CHHHHH---HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC---CCCGGGSTTHHHHEEEE
T ss_pred             HHhhcc---CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCCCCCCEEEE
Confidence            988864   567777789999999999999999999999999999999999999876421   11111111122478999


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +|+||.+|++|+|+||+++   ++++++++.....    ....+++..++.++...|++.      .+++++.+++++++
T Consensus       249 ~s~sK~~g~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~  315 (404)
T 2o1b_A          249 YSLSKGYNMSGFRVGFAVG---NKDMIQALKKYQT----HTNAGMFGALQDAAIYALNHY------DDFLEEQSNVFKTR  315 (404)
T ss_dssp             EESTTTTTCGGGCCEEEEE---CHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHH
T ss_pred             EecchhccCchhheEeEec---CHHHHHHHHHHHh----hccCCCCHHHHHHHHHHHhcC------HHHHHHHHHHHHHH
Confidence            9999999999999999855   7887666654322    122356777777777666542      23457888899999


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKC  395 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i  395 (410)
                      ++++.+.|+ +.+    +.+..+.+++|+|+.+    + .++.+++++++||.+.|+        +  ||+++. +++++
T Consensus       316 ~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l  389 (404)
T 2o1b_A          316 RDRFEAMLA-KAD----LPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKL  389 (404)
T ss_dssp             HHHHHHHHH-HTT----CCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHH
T ss_pred             HHHHHHHHH-hcC----CeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHH
Confidence            999999998 776    4666777888888754    2 345677776679999875        2  999987 89999


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      ++++++|++++++.
T Consensus       390 ~~~l~~l~~~l~~~  403 (404)
T 2o1b_A          390 DEAAIRLTELAYLY  403 (404)
T ss_dssp             HHHHHHHHGGGGGG
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998764

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=5.6e-42  Score=332.94  Aligned_cols=360  Identities=13%  Similarity=0.167  Sum_probs=273.7

Q ss_pred             CCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcC
Q 015283           15 MAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFG   92 (410)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~   92 (410)
                      ...++++..+.+..   ..+++|+|+.|.| +...+|  ++.+.+++.+.+...  ....|++..|.+++|+++++++.+
T Consensus        60 ~~~~s~~~~~~~~~---~~~~~i~l~~g~p-~~~~~p--~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~  133 (448)
T 3aow_A           60 EMRASEVRELLKLV---ETSDIISLAGGLP-NPKTFP--KEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGK  133 (448)
T ss_dssp             HCCCCHHHHHHHHH---HTSSSEECCCCCC-CGGGSC--HHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHHhc---cCCCcEeCCCCCC-CchhCC--HHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHH
Confidence            34445444433322   2457899999987 222222  578888887776442  125798888999999999999855


Q ss_pred             CCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHH
Q 015283           93 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus        93 ~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  172 (410)
                      .++.+ ++++|++  |+|+++++.+++..+  +.+||+|++++|+|.++...++..|++++.+++.+ +  ++|++.+++
T Consensus       134 ~~g~~-~~~~v~~--t~G~~~al~~~~~~l--~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~--g~d~~~L~~  205 (448)
T 3aow_A          134 RYGIS-QDNDIMI--TSGSQQALDLIGRVF--LNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDD-E--GMKVEILEE  205 (448)
T ss_dssp             HHCCC-TTSEEEE--ESSHHHHHHHHHHHH--CCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET-T--EECHHHHHH
T ss_pred             hcCcC-ChhhEEE--eCcHHHHHHHHHHHH--cCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCC-C--CCCHHHHHH
Confidence            55554 5789999  999999999985443  67999999999999999999999999999999843 2  489999999


Q ss_pred             HHh----cCCCCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          173 DIK----AAPGGSFIL-LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       173 ~i~----~~~~~~~~i-i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      .++    +. .+++++ ++++|+||||.+++.+++++|+++|++||++||+||+|..+.+++..  ..++..+ +..+++
T Consensus       206 ~l~~~~~~~-~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~--~~~~~~~-~~~~~v  281 (448)
T 3aow_A          206 KLKELKSQG-KKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNP--EKKIKAL-DNEGRV  281 (448)
T ss_dssp             HHHHHHHTT-CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCC--CCCTGGG-CTTSCE
T ss_pred             HHhhhhccC-CCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC--CcCHHhc-CCCCCE
Confidence            887    31 245554 67999999999999999999999999999999999999998864211  1122122 234589


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      ++++||||.++ +|+|+||+++   ++++++++.....    ....+++.++|.++..+|++..    |.+++++.++.+
T Consensus       282 i~~~S~SK~~~-~GlriG~v~~---~~~l~~~l~~~~~----~~~~~~~~~~q~a~~~~L~~~~----~~~~~~~~~~~~  349 (448)
T 3aow_A          282 IYLGTFSKILA-PGFRIGWMVG---DPGIIRKMEIAKQ----STDLCTNVFGQVVAWRYVDGGY----LEKHIPEIRKFY  349 (448)
T ss_dssp             EEEEESTTTTC-GGGCCEEEEE---CHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHHTTH----HHHHHHHHHHHH
T ss_pred             EEEccchhhcc-ccccEEEEEe---CHHHHHHHHHHHH----HhcCCCCHHHHHHHHHHHHhCC----HHHHHHHHHHHH
Confidence            99999999999 9999999865   7887766654332    1223567788888888887643    356678889999


Q ss_pred             HHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCC----------C--eEEecC
Q 015283          328 KNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD----------G--RISLAG  389 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~----------g--Ris~~~  389 (410)
                      +++++++.+.|+ +. +  ..+.+..+.+|+|+|+.+    +. +++.+++++ ||.+.||          +  ||+++.
T Consensus       350 ~~~~~~l~~~L~-~~~~--~g~~~~~p~~g~~~~v~~~~~~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~  425 (448)
T 3aow_A          350 KPRRDAMLEALE-EFMP--EGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTY  425 (448)
T ss_dssp             HHHHHHHHHHHH-HHCC--TTCEECCCSBSSEEEEECSTTCCHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSS
T ss_pred             HHHHHHHHHHHH-HhCC--CCeEEeCCCccEEEEEEcCCCCCHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCC
Confidence            999999999998 64 2  014666788899999855    33 456777765 9999874          2  999987


Q ss_pred             CCcccHHHHHHHHHHHhhh
Q 015283          390 LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+++++++++++|++++++
T Consensus       426 ~~~e~i~~~~~~L~~~l~~  444 (448)
T 3aow_A          426 VDEDKIMEGIKRLAETIKE  444 (448)
T ss_dssp             SCTHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            6899999999999998865

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=7.9e-42  Score=326.42  Aligned_cols=358  Identities=17%  Similarity=0.172  Sum_probs=278.8

Q ss_pred             CCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHh
Q 015283           13 VTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL   90 (410)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~   90 (410)
                      +...+++.+.++...+.+.  .++++|+|+.|.+    ..+ .++.+.+++.+.+.... ..|++..|..++|+++++++
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~~~   91 (389)
T 1o4s_A           18 ISEIPISKTMELDAKAKALIKKGEDVINLTAGEP----DFP-TPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKRI   91 (389)
T ss_dssp             HHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSC----SSC-CCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHHH
T ss_pred             HhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHH
Confidence            3446667777766655543  3457899999987    222 26889999888875543 57877789999999999998


Q ss_pred             cCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH
Q 015283           91 FGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM  170 (410)
Q Consensus        91 ~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  170 (410)
                      ...+|.+++++++++  ++||++++..+...+  +.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++.+
T Consensus        92 ~~~~g~~~~~~~v~~--~~g~t~al~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  167 (389)
T 1o4s_A           92 GERYKKDISPDQVVV--TNGAKQALFNAFMAL--LDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEV  167 (389)
T ss_dssp             HHHHTCCCCGGGEEE--ESHHHHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHH
T ss_pred             HHHhCCCCCHHHEEE--ecCHHHHHHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHH
Confidence            765566566889999  999999999984433  6799999999999999999999999999999885434678899999


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      ++.+++   +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+.+   ...++..+....++++++
T Consensus       168 ~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g---~~~~~~~~~~~~~~~i~~  241 (389)
T 1o4s_A          168 EGLLVG---KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD---EFTSILDVSEGFDRIVYI  241 (389)
T ss_dssp             HHTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS---CCCCHHHHCSSSTTEEEE
T ss_pred             HHhccc---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCHhhcCCCCCcEEEE
Confidence            998865   56777789999999999999999999999999999999999999887642   111222322224689999


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +|+||.+|++|+|+||+++   ++++++.+.....    ....+++.+++.++...|++. +        ++.+++++++
T Consensus       242 ~s~sK~~~~~G~r~G~l~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~-~--------~~~~~~~~~~  305 (389)
T 1o4s_A          242 NGFSKSHSMTGWRVGYLIS---SEKVATAVSKIQS----HTTSCINTVAQYAALKALEVD-N--------SYMVQTFKER  305 (389)
T ss_dssp             EESTTTTTCGGGCCEEEEC---CHHHHHHHHHHHH----HHTCSCCHHHHHHHHHHTTCC-C--------HHHHHHHHHH
T ss_pred             eechhhcCCcccceEEEEe---CHHHHHHHHHHhh----hcccCCCHHHHHHHHHHHhcc-H--------HHHHHHHHHH
Confidence            9999999999999999854   7776666554322    223356677777777778764 2        5777888999


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCC--CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLA  399 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~  399 (410)
                      ++++.+.|+ ++|    +.+..+.+++|+|+.+  +. ++.+++++++||.+.|+      +  ||+++. +++++++++
T Consensus       306 ~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-~~~~l~~~l  379 (389)
T 1o4s_A          306 KNFVVERLK-KMG----VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEAL  379 (389)
T ss_dssp             HHHHHHHHH-HTT----CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHH
T ss_pred             HHHHHHHHH-hcC----CeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-CHHHHHHHH
Confidence            999999998 776    4556677888888765  34 45667764579999876      2  999987 999999999


Q ss_pred             HHHHHHhhh
Q 015283          400 DAIIDSYHN  408 (410)
Q Consensus       400 ~~l~~~l~~  408 (410)
                      ++|++++++
T Consensus       380 ~~l~~~l~~  388 (389)
T 1o4s_A          380 DRIEDFLNS  388 (389)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHhc
Confidence            999998864

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2.4e-42  Score=331.83  Aligned_cols=365  Identities=16%  Similarity=0.148  Sum_probs=270.1

Q ss_pred             CCCCCCCcccchhHhhhcCC-----CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283           14 TMAPPDPILGVSEAFKADTD-----EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~-----~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      ...+++++.+....+..+..     +.+|||+.|.+.   +.+ .++.+++++.+.+.......|.+..|..++++++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~g~~~---~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~   89 (407)
T 3nra_A           14 DNAPGQEVRQSAAGLEALIRGAPIEGRPVDFSHGDVD---AHE-PTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAP   89 (407)
T ss_dssp             -------------CCTTTCCSCCCCSCCEETTSCCTT---TSC-CCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHH
T ss_pred             CCCccHHHHHHhhhhHHHhhcCCCCCceeeecCcCCC---CCC-CcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHH
Confidence            45566666655543322221     247999999871   222 378899998888754323568888899999999999


Q ss_pred             HhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec----CCCc
Q 015283           89 LLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD----PKTV  163 (410)
Q Consensus        89 ~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----~~~~  163 (410)
                      ++...++..+++ ++|++  ++||++++..++.  ..+.+||+|+++.|+|.++...++..|.+++.+++..    ++++
T Consensus        90 ~l~~~~g~~~~~~~~i~~--~~g~~~a~~~~~~--~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  165 (407)
T 3nra_A           90 RLAAFTGAPVDARDGLII--TPGTQGALFLAVA--ATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRA  165 (407)
T ss_dssp             HHHHHHTSCCCTTTSEEE--ESHHHHHHHHHHH--TTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSC
T ss_pred             HHHHHhCCCCCCCCcEEE--eCCcHHHHHHHHH--HhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCC
Confidence            987777766655 68999  9999999999843  3367999999999999999999999999999998732    3567


Q ss_pred             ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-h
Q 015283          164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-T  242 (410)
Q Consensus       164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~  242 (410)
                      .+|++.+++.+.+   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.  ....+..+. .
T Consensus       166 ~~d~~~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~--~~~~~~~~~~~  240 (407)
T 3nra_A          166 GLDLTGLEEAFKA---GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGA--SYTHLRAEAAV  240 (407)
T ss_dssp             CBCHHHHHHHHHT---TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTC--CCCCGGGCTTS
T ss_pred             CcCHHHHHHHHhh---CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCCChhhcCcc
Confidence            8999999999986   556667789999999999999999999999999999999999999886532  122222222 2


Q ss_pred             cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283          243 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       243 ~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~  322 (410)
                      ..++++++.|+||.+|++|+|+||++.   ++++++.+.....    ....+++.+++.++...|++..      +.+++
T Consensus       241 ~~~~~i~~~s~sK~~g~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~~------~~~~~  307 (407)
T 3nra_A          241 DAENVVTIMGPSKTESLSGYRLGVAFG---SRAIIARMEKLQA----IVSLRAAGYSQAVLRGWFDEAP------GWMED  307 (407)
T ss_dssp             CGGGEEEEECSSSTTCCGGGCCEEEEE---CHHHHHHHHHHHH----HHTSSSCHHHHGGGGGTTCCCT------THHHH
T ss_pred             cCCcEEEEeCcccccCCCeeeEEEEEc---CHHHHHHHHHHHh----hhccCCChHHHHHHHHHHhccc------hHHHH
Confidence            346899999999999999999999855   7886666554332    2233556667777767776431      22456


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCCC----------eEE
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKDG----------RIS  386 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~g----------Ris  386 (410)
                      .+++++++++.+.+.|+ +++.   +.+..+.+++|+|+.+     +. ++...+++++||.+.|+.          ||+
T Consensus       308 ~~~~~~~~~~~l~~~L~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis  383 (407)
T 3nra_A          308 RIARHQAIRDELLHVLR-GCEG---VFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLN  383 (407)
T ss_dssp             HHHHHHHHHHHHHHHHH-TSTT---CBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEE
T ss_pred             HHHHHHHHHHHHHHHHh-cCCC---ceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE
Confidence            77888889999999998 7731   5666778889988754     33 456667666799998752          999


Q ss_pred             ecCCCcccHHHHHHHHHHHhhhc
Q 015283          387 LAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       387 ~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++. +++++++++++|+++++++
T Consensus       384 ~~~-~~~~i~~~~~~l~~~~~~~  405 (407)
T 3nra_A          384 FSQ-DHEAAVAAARRIVTLVERY  405 (407)
T ss_dssp             CCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             eCC-CHHHHHHHHHHHHHHHHHh
Confidence            987 9999999999999998764

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=2.1e-41  Score=323.08  Aligned_cols=362  Identities=11%  Similarity=0.107  Sum_probs=273.2

Q ss_pred             eecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283            5 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK   84 (410)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~   84 (410)
                      ..|....+++..+++.+..+. .+...  +++|+|+.|.+    ..+ .++.+.+++.+.+.... ..|++..|..++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~   74 (386)
T 1u08_A            4 NPLIPQSKLPQLGTTIFTQMS-ALAQQ--HQAINLSQGFP----DFD-GPRYLQERLAHHVAQGA-NQYAPMTGVQALRE   74 (386)
T ss_dssp             -CCCCCCSCCCCCCCHHHHHH-HHHHH--TTCEECCCSSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHH
T ss_pred             CCCccchhhhcCCccHHHHHH-HHHhc--CCeEEecCCCC----CCC-CCHHHHHHHHHHHHhhc-cCCCCCCCCHHHHH
Confidence            446666677777665443333 22222  46899999987    222 36889999888775433 67887789999999


Q ss_pred             HHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc
Q 015283           85 VTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV  163 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  163 (410)
                      ++++++.+.+|..++++ +|++  ++||++++.+++..+  +.+||+|++++|+|..+...++..|.+++.+++.+ +++
T Consensus        75 ~la~~l~~~~g~~~~~~~~v~~--~~g~~~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~  149 (386)
T 1u08_A           75 AIAQKTERLYGYQPDADSDITV--TAGATEALYAAITAL--VRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQP-PHF  149 (386)
T ss_dssp             HHHHHHHHHHSCCCCTTTTEEE--ESSHHHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCT-TTC
T ss_pred             HHHHHHHHHhCCCCCCCCCEEE--cCChHHHHHHHHHHh--CCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCc-ccC
Confidence            99999866556556678 9999  999999999984433  67999999999999999999999999999998843 357


Q ss_pred             ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283          164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR  243 (410)
Q Consensus       164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~  243 (410)
                      .+|++.+++.+.+   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+.+..  ..++..+...
T Consensus       150 ~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~  224 (386)
T 1u08_A          150 RVDWQEFAALLSE---RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQG--HASVLAHPQL  224 (386)
T ss_dssp             CCCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSC--CCCGGGSHHH
T ss_pred             cCCHHHHHHhhcc---cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCC--CcChhcccCc
Confidence            8999999998864   6777777899999999999999999999999999999999999998764221  1122122112


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++++++|+||.+|++|+|+||+++   ++++++.+.....    ....+++.+++.++...|++.      .+++++.
T Consensus       225 ~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~------~~~~~~~  291 (386)
T 1u08_A          225 RERAVAVSSFGKTYHMTGWKVGYCVA---PAPISAEIRKVHQ----YLTFSVNTPAQLALADMLRAE------PEHYLAL  291 (386)
T ss_dssp             HTTEEEEEEHHHHTTCGGGCCEEEEC---CHHHHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHC------THHHHTH
T ss_pred             cCcEEEEecchhhcCCcccceEEEEc---CHHHHHHHHHHHH----hhccCCChHHHHHHHHHHhCC------cHHHHHH
Confidence            35899999999999999999999854   6776666554322    112345566667666666532      2335688


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCC--------C----e
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKD--------G----R  384 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~--------g----R  384 (410)
                      +++++++++++.+.|+ +.|    +.+..+.+++|+|+.+      +. ++.+++++++||.+.|+        +    |
T Consensus       292 ~~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iR  366 (386)
T 1u08_A          292 PDFYRQKRDILVNALN-ESR----LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIR  366 (386)
T ss_dssp             HHHHHHHHHHHHHHTT-SSS----CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEE
T ss_pred             HHHHHHHHHHHHHHHH-HCC----CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEE
Confidence            8999999999999998 776    4666777788888744      23 34566776679999764        2    9


Q ss_pred             EEecCCCcccHHHHHHHHHH
Q 015283          385 ISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       385 is~~~~~~~~i~~~~~~l~~  404 (410)
                      |+++. +++++++++++|++
T Consensus       367 is~~~-~~~~i~~~~~~l~~  385 (386)
T 1u08_A          367 LCFAK-KESTLLAAAERLRQ  385 (386)
T ss_dssp             EECCS-CHHHHHHHHHHHTT
T ss_pred             EEEcC-CHHHHHHHHHHHhh
Confidence            99987 89999999999864

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=9.7e-41  Score=323.57  Aligned_cols=356  Identities=16%  Similarity=0.181  Sum_probs=273.4

Q ss_pred             hHhhhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CC----------ccCcCCcccHHHHHHHHHHhcCC
Q 015283           26 EAFKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN----------KEYLPIEGLAAFNKVTAELLFGA   93 (410)
Q Consensus        26 ~~~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~----------~~y~~~~g~~~lr~aia~~~~~~   93 (410)
                      +.|+.+.+| .+|+|+.+..      +...+.+.+++.+..... +.          ..|.+..|.+++|+++++++...
T Consensus        29 ~~y~~~~~p~~~i~lg~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~  102 (435)
T 3piu_A           29 NPYHEVHNTNGIIQMGLAEN------QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEI  102 (435)
T ss_dssp             SBCBTTTBTTSBEECSSCCC------CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCCCeEEeccccc------cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHh
Confidence            345555555 6789987654      444688888887755321 11          46988899999999999998733


Q ss_pred             --CCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhH
Q 015283           94 --DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGM  170 (410)
Q Consensus        94 --~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l  170 (410)
                        .+..+++++|++  ++||++++..++..  .+.+||.|++++|+|.++...+. ..|.+++.+++.+..++.+|++.+
T Consensus       103 ~~~~~~~~~~~v~~--~~gg~~a~~~~~~~--l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  178 (435)
T 3piu_A          103 RGNKVTFDPNHLVL--TAGATSANETFIFC--LADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETAL  178 (435)
T ss_dssp             TTTSSCCCGGGEEE--EEHHHHHHHHHHHH--HCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHH
T ss_pred             hCCCCCCCHHHEEE--cCChHHHHHHHHHH--hcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHH
Confidence              334566889999  99999999998433  36799999999999999998888 789999999986555678999999


Q ss_pred             HHHHhc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc----
Q 015283          171 IADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR----  243 (410)
Q Consensus       171 ~~~i~~---~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~----  243 (410)
                      ++.+++   ...+++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+.  ...++..+...    
T Consensus       179 ~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~d  256 (435)
T 3piu_A          179 EEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP--SFISVMEVLKDRNCD  256 (435)
T ss_dssp             HHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS--CCCCHHHHHHC----
T ss_pred             HHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcCHHHhccccccc
Confidence            998875   123677788899999999999999999999999999999999999998766432  22233233332    


Q ss_pred             -----CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283          244 -----GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA  318 (410)
Q Consensus       244 -----~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~  318 (410)
                           .+++++++|+||.+|++|+|+||+  +++++++.+.+..    ..  .+...+.+++.++..++.+.++.   .+
T Consensus       257 ~~~~~~~~~i~i~s~sK~~g~~G~r~G~~--~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~l~~~~~~---~~  325 (435)
T 3piu_A          257 ENSEVWQRVHVVYSLSKDLGLPGFRVGAI--YSNDDMVVAAATK----MS--SFGLVSSQTQHLLSAMLSDKKLT---KN  325 (435)
T ss_dssp             ---CGGGGEEEEEESSSSSCCGGGCEEEE--EESCHHHHHHHHH----HG--GGSCCCHHHHHHHHHHHHCHHHH---HH
T ss_pred             cccCCCCCEEEEEeeecccCCCceeEEEE--EeCCHHHHHHHHH----Hh--hcCCCCHHHHHHHHHHhcChHHH---HH
Confidence                 568899999999999999999998  4555564444432    22  22345667777777777776542   34


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------HHHHHHhhhcCcEEEcCC-----
Q 015283          319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------KAQSDNMTNKWHVYMTKD-----  382 (410)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~~-----  382 (410)
                      ++++.+++++++++++.+.|+ +.|    +.+..+.+++|+|+.+.           .+++.++++++||.+.|+     
T Consensus       326 ~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~  400 (435)
T 3piu_A          326 YIAENHKRLKQRQKKLVSGLQ-KSG----ISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHC  400 (435)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TTT----CEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcC----CcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCC
Confidence            567888999999999999998 877    46777888899988652           145677777779999874     


Q ss_pred             ---C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          383 ---G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 ---g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                         +  ||+++..+++++++++++|+++++++
T Consensus       401 ~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~  432 (435)
T 3piu_A          401 TEPGWFRVCFANLPERTLDLAMQRLKAFVGEY  432 (435)
T ss_dssp             SSTTEEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence               1  99997668999999999999998764

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=9.6e-42  Score=328.21  Aligned_cols=365  Identities=14%  Similarity=0.092  Sum_probs=273.7

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      |+.+.++...+++.+..+.+.. .  .++.|+|+.|.+    ..+ .++.+.+++.+.+.... ..|++..|..++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~l   71 (411)
T 2o0r_A            1 MATVSRLRPYATTVFAEMSALA-T--RIGAVNLGQGFP----DED-GPPKMLQAAQDAIAGGV-NQYPPGPGSAPLRRAI   71 (411)
T ss_dssp             -CCCGGGGGGSSCHHHHHHHHH-H--TTTCEESSCSSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHH
T ss_pred             CchhhHhHhcCccHHHHHHHHh-h--cCCeeeccCcCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHH
Confidence            4555666667666444433222 2  246899999986    222 36889999888875543 6788888999999999


Q ss_pred             HHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcc
Q 015283           87 AELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVG  164 (410)
Q Consensus        87 a~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~  164 (410)
                      ++++...+|..++++ +|++  ++||++++.+++..  .+.+||+|++++|+|..+...++..|.+++.+++.++ +++.
T Consensus        72 a~~~~~~~g~~~~~~~~v~~--t~g~~~al~~~~~~--~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  147 (411)
T 2o0r_A           72 AAQRRRHFGVDYDPETEVLV--TVGATEAIAAAVLG--LVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFA  147 (411)
T ss_dssp             HHHHHHHHCCCCCTTTSEEE--EEHHHHHHHHHHHH--HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEE
T ss_pred             HHHHHHHcCCCCCCCceEEE--eCCHHHHHHHHHHH--hcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCC
Confidence            999876656666677 8999  99999999998443  3679999999999999999999999999999987543 3567


Q ss_pred             cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      +|++.+++.+++   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+.  ...++..+....
T Consensus       148 ~d~~~l~~~l~~---~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~  222 (411)
T 2o0r_A          148 LDADALRRAVTP---RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA--RHLPLAGFDGMA  222 (411)
T ss_dssp             CCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTTG
T ss_pred             CCHHHHHHhhcc---CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcChhhccCCC
Confidence            899999999864   677777889999999999999999999999999999999999999876421  111222221124


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA  324 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~  324 (410)
                      +.++++.|+||.+|++|+|+||+++   ++++++.+......    ...+++..++.++...|+..      .+++++.+
T Consensus       223 ~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~~~~----~~~~~~~~~~~a~~~~l~~~------~~~~~~~~  289 (411)
T 2o0r_A          223 ERTITISSAAKMFNCTGWKIGWACG---PAELIAGVRAAKQY----LSYVGGAPFQPAVALALDTE------DAWVAALR  289 (411)
T ss_dssp             GGEEEEEEHHHHTTCTTTCEEEEEC---CHHHHHHHHHHHHH----HTSCCCTTHHHHHHHHHHHC------HHHHHHHH
T ss_pred             CCEEEEeechhhcCCccceEEEEee---CHHHHHHHHHHHhh----ccCCCChHHHHHHHHHHhCC------hHHHHHHH
Confidence            5799999999999999999999854   77866665543221    12234455566665555432      23456888


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCC---------------
Q 015283          325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKD---------------  382 (410)
Q Consensus       325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~---------------  382 (410)
                      ++++++++++.+.|+ +.|    +.+..+.+++|+|+.+      +. ++..++++++||.+.|+               
T Consensus       290 ~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~  364 (411)
T 2o0r_A          290 NSLRARRDRLAAGLT-EIG----FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQA  364 (411)
T ss_dssp             HHHHHHHHHHHHHHH-HHT----CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------
T ss_pred             HHHHHHHHHHHHHHH-HcC----CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccc
Confidence            899999999999998 776    4666777888888754      23 44666776679998642               


Q ss_pred             --C----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          383 --G----RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       383 --g----Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                        +    ||+++. +++++++++++|++++++
T Consensus       365 ~~~~~~iRis~~~-~~e~i~~~~~~l~~~~~~  395 (411)
T 2o0r_A          365 DVWNHLVRFTFCK-RDDTLDEAIRRLSVLAER  395 (411)
T ss_dssp             CCGGGCEEEECCS-CHHHHHHHHHHHGGGGC-
T ss_pred             cCCCCeEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence              2    999986 899999999999988764

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=2.4e-41  Score=329.14  Aligned_cols=340  Identities=15%  Similarity=0.145  Sum_probs=261.1

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      ++++|+|+.|++    +.+ .++.+.+++.+.+..    .....|++..|.+++|+++++++.  ++..+++++|++  +
T Consensus        68 ~~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~--t  138 (449)
T 3qgu_A           68 DAKIISLGIGDT----TEP-LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFI--S  138 (449)
T ss_dssp             TCCCEECSSCCC----CCC-CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEE--E
T ss_pred             CCCEEEeeCCCC----CCC-CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEE--c
Confidence            457999999976    333 378888888777652    223679888999999999999986  666777899999  9


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC----------ccceeeecCCCcccChhhHHHHHhcCC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP----------WSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~----------~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      +|+++++..+ .  ..+.+||+|++++|+|.++...++..|.+          ++.+++.+++++..|+++.        
T Consensus       139 ~G~~~al~~~-~--~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  207 (449)
T 3qgu_A          139 DGSKCDIARI-Q--MMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA--------  207 (449)
T ss_dssp             SCHHHHHHHH-H--HHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC--------
T ss_pred             cCHHHHHHHH-H--HHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc--------
Confidence            9999999986 2  34679999999999999999999999988          8888885544555555432        


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      ++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++.  ....+..+....++++++.|+||.+|
T Consensus       208 ~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g  285 (449)
T 3qgu_A          208 KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD--CPKTIYEIPGADEVAIETCSFSKYAG  285 (449)
T ss_dssp             CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTT--SCSSGGGSTTGGGTEEEEEECSGGGT
T ss_pred             CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCC--CCCCHhhccCCCCcEEEEecchhhcC
Confidence            2455666679999999999999999999999999999999999999886531  12222222223457899999999999


Q ss_pred             ccCCCcceEEEEeCCchhHHH----HHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAAR----VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  334 (410)
                      ++|+|+||+++   ++++++.    +...+.......+.+++.+++.++...+.+..     .+++++.+++++++++++
T Consensus       286 ~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l  357 (449)
T 3qgu_A          286 FTGVRLGWTVV---PKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG-----LKEMNAMIKFYKENAQIL  357 (449)
T ss_dssp             CTTCCCEEEEC---CTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred             CccceeEEEec---CHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC-----HHHHHHHHHHHHHHHHHH
Confidence            99999999844   5554431    11112222222445678888888888877532     245678899999999999


Q ss_pred             HHHhhhccCCCCCcccccCCcceeeecCC---C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHH
Q 015283          335 FDSLSAKDKSGKDWSFILRQIGMFSFTGL---N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLAD  400 (410)
Q Consensus       335 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~  400 (410)
                      .+.|+ ++|    +.+..+.+++|+|+.+   + .+++.++++++||.+.||        +  ||+++. ++++++++++
T Consensus       358 ~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~  431 (449)
T 3qgu_A          358 KTTFT-EMG----FSVYGGDDAPYIWVGFPGKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVR  431 (449)
T ss_dssp             HHHHH-HTT----CCEEESSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHH
T ss_pred             HHHHH-HCC----CeeeCCCCeeEEEEECCCCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHH
Confidence            99999 887    4667788899999865   3 455778888779999875        2  999877 9999999999


Q ss_pred             HHHHHhhh
Q 015283          401 AIIDSYHN  408 (410)
Q Consensus       401 ~l~~~l~~  408 (410)
                      +|++++++
T Consensus       432 ~l~~~~~~  439 (449)
T 3qgu_A          432 RFKEAYGK  439 (449)
T ss_dssp             HHHHHHC-
T ss_pred             HHHHHHHh
Confidence            99999865

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=4.5e-41  Score=325.46  Aligned_cols=359  Identities=18%  Similarity=0.231  Sum_probs=272.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHH--HHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCc---eEEEec
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVV--KKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR---VATVQG  108 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v--~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~---i~~~~t  108 (410)
                      +++|||+.|.+. ..+.   ++.+  .+++.+.+.......|++..|..++|+++++++.+.+ ..+++++   |++  |
T Consensus        47 ~~~i~l~~g~~~-~~~~---~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~--t  119 (430)
T 2x5f_A           47 STTYNATIGMAT-NKDG---KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIV--T  119 (430)
T ss_dssp             TCSEECCCSSCE-ETTE---ECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEE--E
T ss_pred             CCcEEeeeeecc-CCCC---chhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEE--c
Confidence            568999999862 1222   3444  6655555433123679888899999999999986543 4556788   988  9


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG  187 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~  187 (410)
                      +||++++.++...  .+.+||+|++++|+|..+...++. .|.+++.+++.+++ +.+|++.+++.+++.+.++++++++
T Consensus       120 ~g~~~al~~~~~~--l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~  196 (430)
T 2x5f_A          120 NALTHGLSLVGDL--FVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILN  196 (430)
T ss_dssp             SHHHHHHHHHHHH--HCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEEC
T ss_pred             CCchHHHHHHHHH--HhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEc
Confidence            9999999998443  367999999999999999999998 99999999885433 7799999999997644467787889


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHH-----cCCcccccccCCCCCCCCCCCchhHhH-HHhhcCCc---EEEEeccccccc
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDNDASSVR-LFATRGME---LLVAQSYSKNLG  258 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~-----~~~~li~Deay~~~~~~~~~~~~~~~~-~~~~~~~~---~i~~~S~sK~~~  258 (410)
                      +|+||||.+++.+++++|+++|++     ||+++|+||+|.++.+++.  ...++. .+....++   +++++|+||.+|
T Consensus       197 ~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  274 (430)
T 2x5f_A          197 YPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV--YTQSLFTALTNLHSNAILPIRLDGATKEFF  274 (430)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS--CCSCHHHHHHTTCCTTEEEEEEEEHHHHTT
T ss_pred             CCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc--cchHHHHHHhhccCCcceEEEEEecccCCC
Confidence            999999999999999999999999     9999999999999886421  111222 22223557   999999999999


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG-NPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      ++|+|+||+++...++++++.+........+..+.+++.+++.++...|+ +.+    |.+++++.+++++++++.+.+.
T Consensus       275 ~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~~~l~~~  350 (430)
T 2x5f_A          275 AWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQ----FDKEIEQNIQTLKERYEVTKEV  350 (430)
T ss_dssp             CGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChH----HHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999843224777777766544322222445678888888888887 753    4556677899999999999999


Q ss_pred             hhhccCCCCCcccccCCcceeeecCC---CH-HHHHHhhhcCcEEEcCCC----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          338 LSAKDKSGKDWSFILRQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |+ +......+.+..+.+++|+|+.+   +. ++...+++++||.+.||+    ||+++..+++++++++++|+++++++
T Consensus       351 L~-~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~  429 (430)
T 2x5f_A          351 VY-ADQYHSHWQAYDFNSGYFMAIKVHDVDPEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIPHVFDSIAKAIDDL  429 (430)
T ss_dssp             HT-CGGGTTTEEECCCCBSSEEEEEESSSCHHHHHHHHHHHHCEECEECSSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred             HH-hhCCCCCceeeCCCceEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            87 53100125667778888888754   34 456677664799999863    99998448999999999999998765

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3.5e-41  Score=320.46  Aligned_cols=350  Identities=16%  Similarity=0.094  Sum_probs=267.7

Q ss_pred             CCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCC
Q 015283           19 DPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS   96 (410)
Q Consensus        19 ~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~   96 (410)
                      .++..+.+....  ..+.++|||+.|.+    ..+ .++.+.+++.+.+.......|++..|..++|+++++++.+.+|.
T Consensus         8 ~~~~~~~~~~~~~~~~g~~~idl~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~   82 (376)
T 2dou_A            8 SVFLVVDEAKRKARERGVGLIDLSIGST----DLP-PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGV   82 (376)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEECSSCCC----CCC-CCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             chHHHHHHHHHHhhccCCCEEeccCCCC----CCC-CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence            333444443332  23457899999987    222 26889999988875432367876678999999999998665565


Q ss_pred             cccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh
Q 015283           97 VLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK  175 (410)
Q Consensus        97 ~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~  175 (410)
                      +++++ +|++  ++|+++++.++...  .+.+||+|++++|+|..+...++..|.+++.+++  ++++.+|++.+++.+.
T Consensus        83 ~~~~~~~v~~--~~g~~~a~~~~~~~--l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~  156 (376)
T 2dou_A           83 GLDPRREALA--LIGSQEGLAHLLLA--LTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVW  156 (376)
T ss_dssp             CCCTTTSEEE--ESSHHHHHHHHHHH--HCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHH
T ss_pred             CCCCCccEEE--cCCcHHHHHHHHHH--hcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhc
Confidence            55566 8999  99999999998433  3669999999999999999999999999999987  4567789999998886


Q ss_pred             cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283          176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK  255 (410)
Q Consensus       176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  255 (410)
                      .   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++.   ..++....+..+++++++|+||
T Consensus       157 ~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK  230 (376)
T 2dou_A          157 R---EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE---APSPLALPGAKERVVELFSLSK  230 (376)
T ss_dssp             H---HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC---CCCGGGSTTGGGTEEEEEEHHH
T ss_pred             c---CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCCCCCcEEEEecchh
Confidence            4   567777789999999999999999999999999999999999998875421   1111122233457899999999


Q ss_pred             cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      .+|++|+|+||++.   ++++++++.....    ....+++..++.++...|++.      .+++++.+++++++++++.
T Consensus       231 ~~~~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~  297 (376)
T 2dou_A          231 SYNLAGFRLGFALG---SEEALARLERVKG----VIDFNQYAGVLRMGVEALKTP------KEVVRGYARVYRERALGMA  297 (376)
T ss_dssp             HHTCGGGCCEEEEE---CHHHHHHHHHHHH----HHCCCSCHHHHHHHHHHHTSC------HHHHHHHHHHHHHHHHHHH
T ss_pred             hcCChhheeEEEec---CHHHHHHHHHHHH----hcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHH
Confidence            99999999999855   7887666654322    122345677777777778763      2345788889999999999


Q ss_pred             HHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHH
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLAD  400 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~  400 (410)
                      +.|+ +. +    .+..+.+++|+|+.+    + .++.+.++++ ||.+.|+        +  ||+++. ++++++++++
T Consensus       298 ~~L~-~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~  369 (376)
T 2dou_A          298 EALK-GV-L----SLLPPRATMYLWGRLPEGVDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAK  369 (376)
T ss_dssp             HHHT-TT-S----EECCCCBSSEEEEECCTTCCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHH
T ss_pred             HHHH-Hh-c----CccCCCeeEEEEEECCCCCCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHH
Confidence            9998 65 2    555677888888754    2 3456677765 9999875        2  999987 8999999999


Q ss_pred             HHHHHh
Q 015283          401 AIIDSY  406 (410)
Q Consensus       401 ~l~~~l  406 (410)
                      +|++++
T Consensus       370 ~l~~~l  375 (376)
T 2dou_A          370 RIREAL  375 (376)
T ss_dssp             HHHHTC
T ss_pred             HHHHHh
Confidence            999875

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=4.7e-41  Score=325.23  Aligned_cols=344  Identities=14%  Similarity=0.049  Sum_probs=265.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g  110 (410)
                      +++|+|+.|.+    ..+ .++.+.+++.+.+...  ....|++..|..++|+++++++.+.+|.+++++ +|++  ++|
T Consensus        37 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~--~~g  109 (429)
T 1yiz_A           37 YKPLNLGQGFP----DYH-APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLV--TVG  109 (429)
T ss_dssp             HCCEECCSSSC----SSC-CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEE--ESH
T ss_pred             CCEEEecCCCC----CCC-CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEE--ecC
Confidence            46899999987    222 3689999988887541  136787778999999999999866555556678 9999  999


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC--------CcccChhhHHHHHhcCCCCcE
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAAPGGSF  182 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~~~~~~  182 (410)
                      |++++.++...  .+.+||+|+++.|+|..+...++..|.+++.+++.+++        ++.+|++.+++.+++   +++
T Consensus       110 ~~~a~~~~~~~--~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~  184 (429)
T 1yiz_A          110 AYEALYATIQG--HVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE---KTK  184 (429)
T ss_dssp             HHHHHHHHHHH--HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT---TEE
T ss_pred             hHHHHHHHHHH--hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhcc---Cce
Confidence            99999998443  36799999999999999999999999999999885432        567999999998864   677


Q ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      ++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+.+..  ..++..+....++++++.|+||.+|++|+
T Consensus       185 ~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~s~sK~~~~~G~  262 (429)
T 1yiz_A          185 MIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFE--HIRICTLPGMWERTITIGSAGKTFSLTGW  262 (429)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSC--CCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred             EEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCC--CcChhhccCCcCceEEEecchhccCCCCc
Confidence            7777899999999999999999999999999999999999998864221  11221221234589999999999999999


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC-----hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN-----PALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      |+||+++   ++++++.+....    .....+++..++.++...|++     ...    .+++++.+++++++++++.+.
T Consensus       263 r~G~~~~---~~~~~~~l~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~  331 (429)
T 1yiz_A          263 KIGWAYG---PEALLKNLQMVH----QNCVYTCATPIQEAIAVGFETELKRLKSP----ECYFNSISGELMAKRDYMASF  331 (429)
T ss_dssp             CCEEEES---CHHHHHHHHHHH----HTTTCCCCHHHHHHHHHHHHHHHTTTTST----TSHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEe---CHHHHHHHHHHH----hhcccCCChHHHHHHHHHHhcccccccch----HHHHHHHHHHHHHHHHHHHHH
Confidence            9999844   677666654432    222334666677777666654     211    234578889999999999999


Q ss_pred             hhhccCCCCCcccccCCcceeeecCCC----------------H-HHHHHhhhcCcEEEcCC-------------C--eE
Q 015283          338 LSAKDKSGKDWSFILRQIGMFSFTGLN----------------K-AQSDNMTNKWHVYMTKD-------------G--RI  385 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~ll~~~gi~v~~~-------------g--Ri  385 (410)
                      |+ +.|    +.+..+.+++|+|+.+.                . +++.++++++||.+.|+             +  ||
T Consensus       332 L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRi  406 (429)
T 1yiz_A          332 LA-EVG----MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRY  406 (429)
T ss_dssp             HH-HHT----CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEE
T ss_pred             HH-hCC----CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEE
Confidence            98 876    46667778888887542                2 34566776679999763             2  99


Q ss_pred             EecCCCcccHHHHHHHHHHHhhh
Q 015283          386 SLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       386 s~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +++. +++++++++++|+++++.
T Consensus       407 s~~~-~~e~i~~~l~~l~~~l~~  428 (429)
T 1yiz_A          407 CFFK-KDENLQKAAEILRKWKGS  428 (429)
T ss_dssp             ECCS-CHHHHHHHHHHHHHHSCC
T ss_pred             EecC-CHHHHHHHHHHHHHhccC
Confidence            9986 999999999999998764

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=8.4e-41  Score=317.76  Aligned_cols=350  Identities=12%  Similarity=0.052  Sum_probs=269.4

Q ss_pred             CCCCCcccchhHhhhcC-CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283           16 APPDPILGVSEAFKADT-DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD   94 (410)
Q Consensus        16 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~   94 (410)
                      ++++++.++...+++.. +.++|||+.|.+    ..+ .++.+.+++.+.+..  ...|++..|..++|+++++++.+.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~   76 (376)
T 3ezs_A            4 FEPYPFERLRALLKEITPKKRGLDLGIGEP----QFE-TPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRF   76 (376)
T ss_dssp             CCCCHHHHHHHHHTTCCCSSCCCBCSSCCC----CSC-CCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHhhhccCCEEEeCCCCC----CCC-CCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHHh
Confidence            45666777766665422 338999999987    333 368999999887732  3779888899999999999987666


Q ss_pred             CCcccCCceEEEecCChhhHHHHHHHHHHHhCC--CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHH
Q 015283           95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus        95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  172 (410)
                      +..+++++|++  |+||++++.++...  .+.+  ||+|+++.|+|..+...++..|.+++.+++.+.++  +++ .+++
T Consensus        77 g~~~~~~~i~~--t~g~~~al~~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~-~l~~  149 (376)
T 3ezs_A           77 KIELKENELIS--TLGSREVLFNFPSF--VLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKEND--FTP-SLNE  149 (376)
T ss_dssp             SCCCCGGGEEE--ESSSHHHHHHHHHH--HTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGT--SCC-CCCH
T ss_pred             CCCCCHHHEEE--CcCcHHHHHHHHHH--HcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCC--cch-hHHh
Confidence            66667899999  99999999998443  3678  99999999999999999999999999999854333  343 5666


Q ss_pred             HHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-----cCCcE
Q 015283          173 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-----RGMEL  247 (410)
Q Consensus       173 ~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-----~~~~~  247 (410)
                      .+.+   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++   ...++.....     ..+++
T Consensus       150 ~~~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  223 (376)
T 3ezs_A          150 KELQ---EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT---PPPSLLEACMLAGNEAFKNV  223 (376)
T ss_dssp             HHHH---HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS---CCCCHHHHHHHTTCTTCTTE
T ss_pred             hhcc---CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC---CCCCHHHccccccccccCcE
Confidence            6654   45566668999999999999999999999999999999999999988653   1222222222     45789


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      +++.|+||.+|++|+|+||++.   ++++++.+...    ......+++..++.++...|++.+       ++++.++++
T Consensus       224 i~~~s~sK~~g~~G~r~G~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~  289 (376)
T 3ezs_A          224 LVIHSLSKRSSAPGLRSGFIAG---DSRLLEKYKAF----RAYLGYTSANAIQKASEAAWLDDR-------HAEFFRNIY  289 (376)
T ss_dssp             EEEEESTTTTTCGGGCCEEEEE---CHHHHHHHHHH----HTTTCCCCCHHHHHHHHHHHHCSH-------HHHHHHHHH
T ss_pred             EEEecchhccCCccceeEEEee---CHHHHHHHHHH----HhhhcCCCChHHHHHHHHHHhCcH-------HHHHHHHHH
Confidence            9999999999999999999855   88866665442    222334567777787777777542       346888889


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC--HHHHHHhhhcCcEEEcCC----------C--eEEecCCCcc
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--KAQSDNMTNKWHVYMTKD----------G--RISLAGLSLA  393 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~  393 (410)
                      +++++.+.+.|+   +    +.  .+.+++|+|+.+.  .++..++++++||.+.||          +  ||+++. +++
T Consensus       290 ~~~~~~l~~~l~---~----~~--~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~  359 (376)
T 3ezs_A          290 ANNLKLARKIFK---N----TL--IYPYSFYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTP  359 (376)
T ss_dssp             HHHHHHHHHHST---T----CC--CCSBSSEEEEECSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHH
T ss_pred             HHHHHHHHHHhc---C----CC--CCCcceEEEEECCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHH
Confidence            999999988775   3    33  5678889988763  455667776579999763          1  999987 999


Q ss_pred             cHHHHHHHHHHHhhhc
Q 015283          394 KCEYLADAIIDSYHNV  409 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++|++++++.
T Consensus       360 ~i~~~l~~l~~~l~~~  375 (376)
T 3ezs_A          360 LLEKPLEIIETYRENH  375 (376)
T ss_dssp             HHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999998764

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=8.5e-41  Score=322.95  Aligned_cols=371  Identities=15%  Similarity=0.173  Sum_probs=270.8

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHH---------HhhccCCCccCcCCcccH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAEN---------LMLERGENKEYLPIEGLA   80 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~---------~~~~~~~~~~y~~~~g~~   80 (410)
                      +.++...+++.+..+....... .+++|+|+.|.| +...+|.  ..+..++.         +....  ...|.+..|.+
T Consensus         8 s~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~p-~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~   81 (425)
T 2r2n_A            8 TAASAARNPSPIRTMTDILSRG-PKSMISLAGGLP-NPNMFPF--KTAVITVENGKTIQFGEEMMKR--ALQYSPSAGIP   81 (425)
T ss_dssp             CHHHHTCCCCSGGGHHHHHHHS-CTTCEECCCCCC-CGGGCSE--EEEEEEETTSCCEEECHHHHHH--HTSCCCTTCCH
T ss_pred             HHHHhcCCCchHHHHHHHhhcC-CCCeEEcCCcCC-CchhCCH--HHHHHHHhhcccccccccchhh--hcCCCCCCCCH
Confidence            4456677888887777665543 257899999998 2222221  11100000         00001  25698999999


Q ss_pred             HHHHHHHHHhcCCCCCccc-------CCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcc
Q 015283           81 AFNKVTAELLFGADNSVLK-------EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS  153 (410)
Q Consensus        81 ~lr~aia~~~~~~~~~~~~-------~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  153 (410)
                      ++|+++++++.+.++...+       +++|++  |+|+++++.+++..  .+.+||+|++++|+|..+...++..|.+++
T Consensus        82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~--t~G~~~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~  157 (425)
T 2r2n_A           82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCV--TSGSQQGLCKVFEM--IINPGDNVLLDEPAYSGTLQSLHPLGCNII  157 (425)
T ss_dssp             HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEE--ESSHHHHHHHHHHH--HCCTTCEEEEESSCCHHHHHHHGGGTCEEE
T ss_pred             HHHHHHHHHHHHhcCCCCccccccCCcCcEEE--eCcHHHHHHHHHHH--hCCCCCEEEEeCCCcHHHHHHHHHcCCEEE
Confidence            9999999998766666553       368999  99999999998443  367999999999999999999999999999


Q ss_pred             ceeeecCCCcccChhhHHHHHhcCC---------CCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC
Q 015283          154 EYRYYDPKTVGLDFEGMIADIKAAP---------GGSFIL-LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ  223 (410)
Q Consensus       154 ~v~~~~~~~~~~d~~~l~~~i~~~~---------~~~~~i-i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~  223 (410)
                      .+++.+   .++|++.+++.+++.+         ++++++ ++++||||||.++|.+++++|+++|++||++||+||+|.
T Consensus       158 ~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~  234 (425)
T 2r2n_A          158 NVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY  234 (425)
T ss_dssp             EECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG
T ss_pred             EeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence            998842   2589999999987321         234444 568999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH
Q 015283          224 GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV  303 (410)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  303 (410)
                      ++.+.+.  ...++..+ +..+++++++||||.++ +|+|+||+++   ++++++++....    .....+++.++|.++
T Consensus       235 ~~~~~g~--~~~~~~~~-~~~~~~i~~~s~SK~~~-~GlRiG~~~~---~~~l~~~l~~~~----~~~~~~~~~~~q~a~  303 (425)
T 2r2n_A          235 FLQFNKF--RVPTFLSM-DVDGRVIRADSFSKIIS-SGLRIGFLTG---PKPLIERVILHI----QVSTLHPSTFNQLMI  303 (425)
T ss_dssp             GGBSSSS--CCCCTGGG-CTTSCEEEEEESTTTTC-STTCCEEEEE---EHHHHHHHHHHH----HTTTCSSCHHHHHHH
T ss_pred             cccCCCC--CCCCcccc-CCCCCEEEEccchhhcc-CccceEEEec---CHHHHHHHHHHH----HHhcCCCCHHHHHHH
Confidence            8876421  11122222 23458999999999999 9999999865   677666655432    223346778888888


Q ss_pred             HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCc
Q 015283          304 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWH  376 (410)
Q Consensus       304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~g  376 (410)
                      ..+|++.. .+.|.+++++.++.++++++.+.+.|+ +.  +.   ..+..+.+|+|+|+.+     ..+++.+.+.++|
T Consensus       304 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~---~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~g  378 (425)
T 2r2n_A          304 SQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAAD-KWLTGL---AEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMG  378 (425)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCSSS---EEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTT
T ss_pred             HHHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCC---eEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCC
Confidence            77776410 122456678899999999999999998 64  31   2345678899998754     2344455555689


Q ss_pred             EEEcCC-----------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          377 VYMTKD-----------G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       377 i~v~~~-----------g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |.+.||           +  ||+++..+++++++++++|++++++.
T Consensus       379 v~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~  424 (425)
T 2r2n_A          379 VLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES  424 (425)
T ss_dssp             EECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             cEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence            999763           2  99998559999999999999998753

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=1.2e-40  Score=321.10  Aligned_cols=369  Identities=15%  Similarity=0.177  Sum_probs=272.2

Q ss_pred             CCcccchhHhhhcCC-CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcC-----
Q 015283           19 DPILGVSEAFKADTD-EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG-----   92 (410)
Q Consensus        19 ~~~~~~~~~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~-----   92 (410)
                      +++..+.+.+....+ +++|+|+.|.| +.....+.++.+.+++.+.+.......|++..|..++|+++++++.+     
T Consensus        17 ~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~   95 (416)
T 1bw0_A           17 NPIRTVSDNAKPSPSPKPIIKLSVGDP-TLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHK   95 (416)
T ss_dssp             CHHHHHHHTCCCCCSCSCCEECCCCCT-TTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCS
T ss_pred             cHHHHHHHHHHHhhcCCCeEEecCcCC-CcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhccc
Confidence            334444444333222 46899999987 21112233789999988887554346798778999999999999871     


Q ss_pred             -CCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHH
Q 015283           93 -ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus        93 -~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  171 (410)
                       ..+..+++++|++  ++||++++.+++..+  +.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++.++
T Consensus        96 ~~~~~~~~~~~v~~--~~g~~~al~~~~~~l--~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  171 (416)
T 1bw0_A           96 EELKSTIVKDNVVL--CSGGSHGILMAITAI--CDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIR  171 (416)
T ss_dssp             TTTGGGCCGGGEEE--ESHHHHHHHHHHHHH--CCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHH
T ss_pred             ccCCCCCCcceEEE--eCChHHHHHHHHHHh--CCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHH
Confidence             3566677889999  999999999984433  67999999999999999999999999999999855446789999999


Q ss_pred             HHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC--chhHhHHHhhcCCcEEE
Q 015283          172 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN--DASSVRLFATRGMELLV  249 (410)
Q Consensus       172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~--~~~~~~~~~~~~~~~i~  249 (410)
                      +.+++   ++.++++++|+||||.+++.+++++|+++|++||++||+||+|.++.+.+...  ...++..+ ....++++
T Consensus       172 ~~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~-~~~~~~i~  247 (416)
T 1bw0_A          172 RLKDD---KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF-ETTVPRVI  247 (416)
T ss_dssp             HHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS-CCSCCEEE
T ss_pred             HHhcc---CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHc-cCCCcEEE
Confidence            98874   56777778999999999999999999999999999999999999987643200  11111111 22346899


Q ss_pred             EecccccccccCCCcceEEEEeCCc-hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      ++|+||.++++|+|+||+++  +++ ++++++...+..... ...+++..++.++...|+...     .+++++.+++++
T Consensus       248 ~~s~sK~~~~~Glr~G~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~  319 (416)
T 1bw0_A          248 LGGTAKNLVVPGWRLGWLLY--VDPHGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEALLNTP-----QEHLDQIVAKIE  319 (416)
T ss_dssp             EEESTTTTSCGGGCCEEEEE--ECTTCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHHHHSSC-----HHHHHHHHHHHH
T ss_pred             EecchhhCCCCCceEEEEEe--eCchhhHHHHHHHHHHHhc-cccCCCcHHHHHHHHHHhccc-----HHHHHHHHHHHH
Confidence            99999999999999999843  443 455555543332211 122466777777777776421     233567788899


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------CH-HHHHHhhhcCcEEEcCC------C--eEEecCC
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------NK-AQSDNMTNKWHVYMTKD------G--RISLAGL  390 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~  390 (410)
                      ++++++.+.|+ +++  + +.+..+.+++|+|+.+         +. +++.++++++||.+.||      +  ||+++. 
T Consensus       320 ~~~~~l~~~L~-~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~-  394 (416)
T 1bw0_A          320 ESAMYLYNHIG-ECI--G-LAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR-  394 (416)
T ss_dssp             HHHHHHHHHHT-TST--T-EEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-
T ss_pred             HHHHHHHHHHH-hCC--C-CcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecC-
Confidence            99999999998 762  1 4556677788887543         23 34567766679999885      2  999965 


Q ss_pred             CcccHHHHHHHHHHHhhhc
Q 015283          391 SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++++|++++++.
T Consensus       395 ~~e~l~~~l~~l~~~l~~~  413 (416)
T 1bw0_A          395 PVEVYREAVERIKAFCQRH  413 (416)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            8999999999999998753

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=2.6e-41  Score=327.81  Aligned_cols=353  Identities=13%  Similarity=0.087  Sum_probs=270.2

Q ss_pred             cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           31 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        31 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ..++++|+|+.|.+    ..+ .++.+.+++.+.+.......|++..|..++|+++++++...++..+++++|++  |+|
T Consensus        41 ~~g~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~--t~g  113 (437)
T 3g0t_A           41 ATGTKFCRMEMGVP----GLP-APQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVP--TVG  113 (437)
T ss_dssp             HHTCCCEECCCCSC----CSC-CCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESH
T ss_pred             hcCCCEEeccCcCC----CCC-CCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEE--eCC
Confidence            34568999999997    333 37899999888776432377988889999999999999877777777899999  999


Q ss_pred             hhhHHHHHHHHHHHh--CCCC--EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEe
Q 015283          111 GTGSLRLAAALIERY--FPGA--KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH  186 (410)
Q Consensus       111 gt~a~~~~~~~~~~~--~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~  186 (410)
                      |++++.+++..  .+  .+||  +|+++.|+|..+...++..|.+++.+++. ++++.+|++.+++.++.  ++++++++
T Consensus       114 ~t~al~~~~~~--l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~--~~~~~v~l  188 (437)
T 3g0t_A          114 SMQGCFVSFLV--ANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQT--GQFCSIIY  188 (437)
T ss_dssp             HHHHHHHHHHH--HTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTT--TCCCEEEE
T ss_pred             HHHHHHHHHHH--HhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhc--CCceEEEE
Confidence            99999998433  35  7999  99999999999999999999999999985 45677899999999943  25666777


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch---hHh-HHHhhcCCcEEEEecccccccccCC
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA---SSV-RLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~---~~~-~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      ++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++ ....   .++ ..+....+++++++|+||.+|++|+
T Consensus       189 ~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  267 (437)
T 3g0t_A          189 SNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQ  267 (437)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTS-CCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGG
T ss_pred             eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCC-CcCcccccchhhccCCCCCcEEEEEcCccCCCCccc
Confidence            8999999999999999999999999999999999999887642 1111   000 1222236789999999999999999


Q ss_pred             CcceEEEEeCCchhHH-HH---HH----------HHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          263 RIGAMNVVCSSSDLAA-RV---KS----------QLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~-~~---~~----------~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      |+||+++   ++++++ .+   ..          .+.........+++.+++.++...|++.+.   |.+++++.+++++
T Consensus       268 r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~  341 (437)
T 3g0t_A          268 RIGVLMI---SGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACND---GEYNFRDSVIEYG  341 (437)
T ss_dssp             CCEEEEE---CHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHT---TSCCHHHHHHHHH
T ss_pred             eeEEEEE---CHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHh---HHHHHHHHHHHHH
Confidence            9999865   677555 40   00          022222222346777777777777664321   1222578889999


Q ss_pred             HHHHHHHHHhhhccCCCCCcccc------cC-CcceeeecCC---CH-HHHHHhhhcCcEEEcCC--------C--eEEe
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFI------LR-QIGMFSFTGL---NK-AQSDNMTNKWHVYMTKD--------G--RISL  387 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~------~~-~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~--------g--Ris~  387 (410)
                      ++++++.+.|+ ++|    +.+.      .+ .+++|+|+.+   +. ++.+.|.+ +||.+.|+        +  |||+
T Consensus       342 ~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gi~v~~~~~~~~~~~~~iRis~  415 (437)
T 3g0t_A          342 RKARIMKKMFL-DNG----FNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFVR-YGMCAITLKTTGSKRNEAMRICT  415 (437)
T ss_dssp             HHHHHHHHHHH-TTT----EEESSCEETTEECCSSSEEEEEETTCCHHHHHHHHHH-TTEECEESTTTTCCCTTCEEEEC
T ss_pred             HHHHHHHHHHH-HcC----CEEeccccCCCCCceeEEEEEecCCCCHHHHHHHHHH-cCeEEeeccccCCCCCCEEEEEE
Confidence            99999999998 876    4555      24 7888888754   44 44566665 59999876        2  9999


Q ss_pred             cCCCcccHHHHHHHHHHHhhh
Q 015283          388 AGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       388 ~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +..+++++++++++|++++++
T Consensus       416 ~~~~~e~i~~~~~~l~~~~~~  436 (437)
T 3g0t_A          416 SLLPESQFPDLEKRLQMLNAE  436 (437)
T ss_dssp             SSSCGGGHHHHHHHHHHHHHH
T ss_pred             ecCCHHHHHHHHHHHHHHHhc
Confidence            877999999999999998764

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=1.6e-40  Score=319.10  Aligned_cols=360  Identities=17%  Similarity=0.143  Sum_probs=269.6

Q ss_pred             CCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCC
Q 015283           16 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN   95 (410)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~   95 (410)
                      .+..++. ..+++... +++.|+|+.|.+. ....+ .++.+.+++.+.+.... ..|++..|..++|+++++++...++
T Consensus        22 ~~~~~~~-~~~~~~~~-g~~~i~l~~~~~~-~~~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~l~~~~g   96 (406)
T 1xi9_A           22 AIRDVVL-PARELEKK-GIKVIRLNIGDPV-KFDFQ-PPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNG   96 (406)
T ss_dssp             --------CHHHHHHT-TCCCEECCCCCGG-GTTCC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHH-HHHHHHHc-CCCEEEecCCCCC-cCCCC-CCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHhcC
Confidence            3333444 44444443 4678999999861 11112 36888888888775543 5788778999999999999877666


Q ss_pred             CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh
Q 015283           96 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK  175 (410)
Q Consensus        96 ~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~  175 (410)
                      ..+++++|++  ++||++++.++...+  +.+||+|++++|+|.++...++..|.+++.+++.+++++.+|++.+++.++
T Consensus        97 ~~~~~~~v~~--t~g~~~al~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~  172 (406)
T 1xi9_A           97 VDITPDDVRV--TAAVTEALQLIFGAL--LDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT  172 (406)
T ss_dssp             CCCCGGGEEE--ESHHHHHHHHHHHHH--CCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC
T ss_pred             CCCCHHHEEE--cCChHHHHHHHHHHh--CCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC
Confidence            6677889999  999999999984433  679999999999999999999999999999998543567789999999987


Q ss_pred             cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc-EEEEeccc
Q 015283          176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYS  254 (410)
Q Consensus       176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~s  254 (410)
                      +   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++   ...++..+ + .++ +++++|+|
T Consensus       173 ~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~---~~~~~~~~-~-~~~~~i~~~s~s  244 (406)
T 1xi9_A          173 D---RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG---EHISPGSL-T-KDVPVIVMNGLS  244 (406)
T ss_dssp             T---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS---CCCCHHHH-C-SSSCEEEEEEST
T ss_pred             c---CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC---CCCCHHHc-C-CCceEEEEeccc
Confidence            5   56777778999999999999999999999999999999999999988631   11223233 2 456 89999999


Q ss_pred             ccccccCCCcceEEEEeCCc----hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          255 KNLGLYAERIGAMNVVCSSS----DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       255 K~~~~~G~r~G~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      |.++++|+|+||+++ +.++    ++++++.....    .. .+++..++.++...|+...      +.+++.+++++++
T Consensus       245 K~~~~~G~r~G~~~~-~~~~~~~~~l~~~l~~~~~----~~-~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~~~  312 (406)
T 1xi9_A          245 KVYFATGWRLGYMYF-VDPENKLSEVREAIDRLAR----IR-LCPNTPAQFAAIAGLTGPM------DYLKEYMKKLKER  312 (406)
T ss_dssp             TTTCCGGGCCEEEEE-ECTTCTTHHHHHHHHHHHH----HT-CCSCSHHHHHHHHHHHSCC------HHHHHHHHHHHHH
T ss_pred             cccCCCccEEEEEEE-ecCchhHHHHHHHHHHHHH----hh-cCCCHHHHHHHHHHHhCCc------HHHHHHHHHHHHH
Confidence            999999999999851 1366    76666554322    12 3455666777777774321      1246778889999


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecC------CCH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcc
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG------LNK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLA  393 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~------~~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~  393 (410)
                      ++++.+.|+ +++   .+.+..+.+++|+|+.      .+. ++.+++++++||.+.|+        +  ||+++ .+++
T Consensus       313 ~~~l~~~L~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~  387 (406)
T 1xi9_A          313 RDYIYKRLN-EIP---GISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIE  387 (406)
T ss_dssp             HHHHHHHHH-TST---TEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHH
T ss_pred             HHHHHHHHH-hCC---CCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHH
Confidence            999999998 772   1566667788888753      233 44567764579999875        2  99998 5999


Q ss_pred             cHHHHHHHHHHHhhhc
Q 015283          394 KCEYLADAIIDSYHNV  409 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++|+++++++
T Consensus       388 ~i~~~~~~l~~~l~~~  403 (406)
T 1xi9_A          388 ILEEAMDRFEKFMKER  403 (406)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998764

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=3.9e-41  Score=320.09  Aligned_cols=339  Identities=14%  Similarity=0.115  Sum_probs=267.2

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ++++|||+.|.+    ..+ .++.+.+++.+.+.... ..|++ .+ .++|+++++++.+.++..+++++|++  |+||+
T Consensus        22 g~~~idl~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~   91 (377)
T 3fdb_A           22 GQGVLPLWVAES----DFS-TCPAVLQAITDAVQREA-FGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFP--IPDVV   91 (377)
T ss_dssp             CTTSEECCSSCC----CSC-CCHHHHHHHHHHHHTTC-CSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred             CCCeeeecccCC----CCC-CCHHHHHHHHHHHHcCC-CCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEE--eCChH
Confidence            357899999976    333 37899999988876544 67877 77 89999999999877777777899999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++..++.  ..+.+||+|+++.|+|.++...++..|.+++.+++.+  +  +|++++++.+++   +++++++++|+||
T Consensus        92 ~a~~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~--~d~~~l~~~l~~---~~~~v~i~~p~np  162 (377)
T 3fdb_A           92 RGLYIAID--HFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATG--G--INLHDVEKGFQA---GARSILLCNPYNP  162 (377)
T ss_dssp             HHHHHHHH--HHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTT--S--CCHHHHHHHHHT---TCCEEEEESSBTT
T ss_pred             HHHHHHHH--HhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCC--C--CCHHHHHHHhcc---CCCEEEEeCCCCC
Confidence            99999843  3367999999999999999999999999999998842  2  899999999986   4667777999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|++||+++|+||+|.++.+.+ +....++..+ ...++++++.|+||.+|++|+|+||+  ++.
T Consensus       163 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G~~--~~~  238 (377)
T 3fdb_A          163 LGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG-QHTVAAGVSD-TAASVCITITAPSKAWNIAGLKCAQI--IFS  238 (377)
T ss_dssp             TTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSCH-HHHHHEEEEECSTTTTTCGGGCCEEE--ECC
T ss_pred             CCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCC-CCCcccHHHc-cCCCcEEEEEeChHhccCcchhheEE--EeC
Confidence            9999999999999999999999999999999988642 0111222111 12457899999999999999999997  555


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFI  351 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~  351 (410)
                      ++++++.+..    .......+++.+++.++...|++.      .+++++.+++++++++++.+.|+ +. +.   +.+.
T Consensus       239 ~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~~---~~~~  304 (377)
T 3fdb_A          239 NPSDAEHWQQ----LSPVIKDGASTLGLIAAEAAYRYG------TDFLNQEVAYLKNNHDFLLHEIP-KRIPG---AKIT  304 (377)
T ss_dssp             SHHHHHHHHH----SCHHHHCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHSTT---CEEC
T ss_pred             CHHHHHHHHH----HHHhhcCCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---ceEe
Confidence            7775555433    222223467777777776666542      23457888999999999999998 74 21   5677


Q ss_pred             cCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          352 LRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       352 ~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+.++++.|+.+     +.+++..+++++||.+.||        +  ||+++. +++++++++++|+++++++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~~~  376 (377)
T 3fdb_A          305 PMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVSHH  376 (377)
T ss_dssp             CCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHTTC
T ss_pred             cCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence            788888887744     3456788888779999875        2  999987 8999999999999998764

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=7.9e-40  Score=316.54  Aligned_cols=347  Identities=13%  Similarity=0.150  Sum_probs=264.0

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhc--------c--CCCccCcCCcccHHHHHHHHHHhcCCCCCc--ccCCc
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE--------R--GENKEYLPIEGLAAFNKVTAELLFGADNSV--LKEQR  102 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~--------~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~--~~~~~  102 (410)
                      .+|+|+.+.+      +..++.+.+++.+...        .  .....|++..|..++|+++++++...++..  +++++
T Consensus        37 ~~i~l~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~  110 (428)
T 1iay_A           37 GVIQMGLAEN------QLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER  110 (428)
T ss_dssp             SBEECSSCCC------CSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred             ceeeeccccc------hhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence            5788887664      3335678877775421        0  012678877889999999999987666644  56789


Q ss_pred             eEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-hhCCCCccceeeecCCCcccChhhHHHHHhc---CC
Q 015283          103 VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWSEYRYYDPKTVGLDFEGMIADIKA---AP  178 (410)
Q Consensus       103 i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~  178 (410)
                      |++  ++|+++++.+++.  ..+.+||+|++++|+|..+...+ ...|.+++.+++.+++++.+|++.+++.+++   ..
T Consensus       111 i~~--~~G~~~ai~~~~~--~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~  186 (428)
T 1iay_A          111 VVM--AGGATGANETIIF--CLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSN  186 (428)
T ss_dssp             CEE--EEHHHHHHHHHHH--HHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTT
T ss_pred             EEE--ccChHHHHHHHHH--HhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcC
Confidence            999  9999999999843  33679999999999999997755 4689999999885445678899999988864   12


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-------CCcEEEEe
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-------GMELLVAQ  251 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~  251 (410)
                      ++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++.  ...++..+...       .++++++.
T Consensus       187 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~viv~~  264 (428)
T 1iay_A          187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP--QFVSIAEILDEQEMTYCNKDLVHIVY  264 (428)
T ss_dssp             CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS--CCCCHHHHHTSGGGTTSCTTSEEEEE
T ss_pred             CceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCC--CccCHHHhccccccccCCCCcEEEEe
Confidence            3577777899999999999999999999999999999999999998765421  11122233322       46889999


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      |+||.+|++|+|+||+  ++.++++++.+...    .  .+.+++.+++.++..+|++.++.   .+++++.++++++++
T Consensus       265 s~sK~~g~~Glr~G~~--~~~~~~~~~~~~~~----~--~~~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~~~~  333 (428)
T 1iay_A          265 SLSKDMGLPGFRVGII--YSFNDDVVNCARKM----S--SFGLVSTQTQYFLAAMLSDEKFV---DNFLRESAMRLGKRH  333 (428)
T ss_dssp             ESTTTSSCGGGCEEEE--EESCHHHHHHHHHH----H--TTSCCCHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHH
T ss_pred             cchhhcCCCCceEEEE--EeCCHHHHHHHHHH----H--hcccCCHHHHHHHHHHhcChHHH---HHHHHHHHHHHHHHH
Confidence            9999999999999998  45566766655432    1  12356778888888888876532   345678889999999


Q ss_pred             HHHHHHhhhccCCCCCcccccCCcceeeecCCC----------H-HHHHHhhhcCcEEEcCC--------C--eEEecCC
Q 015283          332 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------K-AQSDNMTNKWHVYMTKD--------G--RISLAGL  390 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~  390 (410)
                      +++.+.|+ ++|    +.+..+.+++|+|+.+.          . ++.+++++++||.+.++        +  ||+++..
T Consensus       334 ~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~  408 (428)
T 1iay_A          334 KHFTNGLE-VVG----IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANM  408 (428)
T ss_dssp             HHHHHHHH-HTT----CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSS
T ss_pred             HHHHHHHH-hcC----CcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecC
Confidence            99999998 876    45566667889887652          1 34566666669999874        2  9999855


Q ss_pred             CcccHHHHHHHHHHHhhhc
Q 015283          391 SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++++|++++++.
T Consensus       409 ~~e~i~~~~~~l~~~l~~~  427 (428)
T 1iay_A          409 DDGTVDIALARIRRFVGVE  427 (428)
T ss_dssp             CHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHhcc
Confidence            8999999999999998764

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=3.6e-40  Score=312.79  Aligned_cols=348  Identities=14%  Similarity=0.141  Sum_probs=268.4

Q ss_pred             CCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHh
Q 015283           13 VTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL   90 (410)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~   90 (410)
                      ++..+++++.++.....+.  .++++|+|+.|.+    ..++ ++.+.+++.+.+.... ..|++..|..++|+++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~~-~~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~   79 (370)
T 2z61_A            6 LLNFESFEVMDILALAQKLESEGKKVIHLEIGEP----DFNT-PKPIVDEGIKSLKEGK-THYTDSRGILELREKISELY   79 (370)
T ss_dssp             HHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSC----SSCC-CHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHH
T ss_pred             hhhccccHHHHHHHHHHHHHhcCCCEEEccCCCC----CCCC-CHHHHHHHHHHHHcCc-cCCCCCCCCHHHHHHHHHHH
Confidence            4456666676666544432  2457899999987    3222 6889999888775543 67887789999999999998


Q ss_pred             cCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH
Q 015283           91 FGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM  170 (410)
Q Consensus        91 ~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  170 (410)
                      ...++..+++++|++  ++||++++.++...+  +.+||+|++++|+|..+...++..|.+++.++        +|++++
T Consensus        80 ~~~~g~~~~~~~v~~--~~g~~~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l  147 (370)
T 2z61_A           80 KDKYKADIIPDNIII--TGGSSLGLFFALSSI--IDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESL  147 (370)
T ss_dssp             HHHSSCCCCGGGEEE--ESSHHHHHHHHHHHH--CCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHH
T ss_pred             HHHhCCCCChhhEEE--CCChHHHHHHHHHHh--cCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHH
Confidence            776677777899999  999999999985433  67999999999999999999999999887776        588999


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      ++.+++   +++++++++|+||||.+++.+    |.++|++||+++|+||+|..+.+++   ...++..+....++++++
T Consensus       148 ~~~l~~---~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g---~~~~~~~~~~~~~~~i~~  217 (370)
T 2z61_A          148 EEALSD---KTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEG---KCYSAIEFDENLEKTILI  217 (370)
T ss_dssp             HHHCCS---SEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSS---CCCCGGGTCTTCSSEEEE
T ss_pred             HHhccc---CceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCC---CCcCHHHccCCCCcEEEE
Confidence            998865   567777799999999999988    8888999999999999999887642   111222221234689999


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN-PALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~~~  329 (410)
                      +|+||.+|++|+|+||+++   ++++++.+.....    ....+++..++.++...|+. .      .+++++.++++++
T Consensus       218 ~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~~~  284 (370)
T 2z61_A          218 NGFSKLYAMTGWRIGYVIS---NDEIIEAILKLQQ----NLFISAPTISQYAALKAFEKET------EREINSMIKEFDR  284 (370)
T ss_dssp             EESTTTTTCGGGCCEEEEC---CHHHHHHHHHHHH----HHTSSSCHHHHHHHGGGGSHHH------HHHHHHHHHHHHH
T ss_pred             ecChhccCCccceEEEEEE---CHHHHHHHHHHHh----hcccCCCHHHHHHHHHHHhccC------HHHHHHHHHHHHH
Confidence            9999999999999999754   6676666554322    22235667777777666664 2      2345778889999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCC--CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHH
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCE  396 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~  396 (410)
                      +++++.+.|+ ++|    +.+..+.+++|+|+.+  +. ++.+++++++||.+.|+        +  ||+++. ++++++
T Consensus       285 ~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~-~~~~i~  358 (370)
T 2z61_A          285 RRRLVLKYVK-DFG----WEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYAN-SYENIK  358 (370)
T ss_dssp             HHHHHHHHHH-HTT----CBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCS-CHHHHH
T ss_pred             HHHHHHHHHH-HcC----CeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeC-CHHHHH
Confidence            9999999998 776    4666677888888766  33 45667764579999874        2  999985 999999


Q ss_pred             HHHHHHHHHhh
Q 015283          397 YLADAIIDSYH  407 (410)
Q Consensus       397 ~~~~~l~~~l~  407 (410)
                      +++++|+++++
T Consensus       359 ~~~~~l~~~l~  369 (370)
T 2z61_A          359 EGLERIKEFLN  369 (370)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=5.3e-40  Score=315.85  Aligned_cols=358  Identities=12%  Similarity=0.124  Sum_probs=275.8

Q ss_pred             cCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283           11 EGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~   88 (410)
                      .++...+++++.++...+.+.  .++++|+|+.|.+    +.+ .++.+.+++ +.+.... ..|++..|..++|+++++
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~-~~~~v~~a~-~~l~~~~-~~y~~~~g~~~l~~~la~   90 (409)
T 2gb3_A           18 DRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQP----DLK-TPEVFFERI-YENKPEV-VYYSHSAGIWELREAFAS   90 (409)
T ss_dssp             HHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCC----CSC-CCTHHHHHH-HHTCCSS-CCCCCTTCCHHHHHHHHH
T ss_pred             HHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCC----CCC-CCHHHHHHH-HHHhcCC-CCCCCCCCcHHHHHHHHH
Confidence            445667777777766655432  3457899999987    322 268899999 8775543 678888899999999999


Q ss_pred             HhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283           89 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE  168 (410)
Q Consensus        89 ~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  168 (410)
                      ++...++..++++++++  ++||++++.+++..  .+.+||+|++++|+|..+...++..|.+++.+++.+++++.+ ++
T Consensus        91 ~~~~~~g~~~~~~~v~~--~~g~t~a~~~~~~~--~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~  165 (409)
T 2gb3_A           91 YYKRRQRVDVKPENVLV--TNGGSEAILFSFAV--IANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQ  165 (409)
T ss_dssp             HHHHTSCCCCCGGGEEE--ESHHHHHHHHHHHH--HCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CT
T ss_pred             HHHHHhCCCCCHHHEEE--eCCHHHHHHHHHHH--hCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HH
Confidence            99877777777889999  99999999998443  367999999999999999999999999999998853334545 78


Q ss_pred             hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283          169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL  248 (410)
Q Consensus       169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i  248 (410)
                      .+++.+.+   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|..+.+.+   ...++  +....++++
T Consensus       166 ~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~---~~~~~--~~~~~~~~i  237 (409)
T 2gb3_A          166 NLESFINE---RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG---EFASA--LSIESDKVV  237 (409)
T ss_dssp             TGGGGCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS---CCCCG--GGSCCTTEE
T ss_pred             HHHHhhCc---CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC---CCCCc--cccCCCCEE
Confidence            88887764   67777788999999999999999999999999999999999999987642   11121  111235799


Q ss_pred             EEecccccccccCCCcceEEEEeCCc-hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          249 VAQSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       249 ~~~S~sK~~~~~G~r~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      +++|+||.+|++|+|+||+++   ++ ++++.+.....    ... +++.+++.++...|+..      .+.+++.++++
T Consensus       238 ~~~s~sK~~g~~G~r~G~~~~---~~~~l~~~l~~~~~----~~~-~~~~~~~~a~~~~l~~~------~~~~~~~~~~~  303 (409)
T 2gb3_A          238 VIDSVSKKFSACGARVGCLIT---RNEELISHAMKLAQ----GRL-APPLLEQIGSVGLLNLD------DSFFDFVRETY  303 (409)
T ss_dssp             EEEESTTTTTCGGGCCEEEEC---SCHHHHHHHHHHHH----HSC-CCCHHHHHHHHHHHTCC------HHHHHHHHHHH
T ss_pred             EEecchhccCCccceEEEEEE---CcHHHHHHHHHHHh----ccC-CCCHHHHHHHHHHHhcc------HHHHHHHHHHH
Confidence            999999999999999999843   55 76666554322    222 56777777777778653      23456788889


Q ss_pred             HHHHHHHHHHhhhccCCCCCccc-ccCCcceeeecCC---CH-HHHHHhhhc-----CcEEEcCC-----------C--e
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGL---NK-AQSDNMTNK-----WHVYMTKD-----------G--R  384 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~---~~-~~~~~ll~~-----~gi~v~~~-----------g--R  384 (410)
                      +++++++.+.|+ ++|    +.+ ..+.+++|+|+.+   +. ++...++++     +||.+.|+           +  |
T Consensus       304 ~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iR  378 (409)
T 2gb3_A          304 RERVETVLKKLE-EHG----LKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIR  378 (409)
T ss_dssp             HHHHHHHHHHHH-HTT----CCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEE
T ss_pred             HHHHHHHHHHHH-HcC----ceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEE
Confidence            999999999998 776    455 5677888888654   33 446667665     49999763           2  9


Q ss_pred             EEecCCCcccHHHHHHHHHHHhhh
Q 015283          385 ISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       385 is~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      |+++ .+++++++++++|++++++
T Consensus       379 is~~-~~~e~i~~~~~~l~~~l~~  401 (409)
T 2gb3_A          379 IACV-LEKDLLSRAIDVLMEGLKM  401 (409)
T ss_dssp             EECC-SCHHHHHHHHHHHHHHHHH
T ss_pred             EEeC-CCHHHHHHHHHHHHHHHHH
Confidence            9998 4999999999999998865

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=6e-40  Score=313.38  Aligned_cols=344  Identities=12%  Similarity=0.092  Sum_probs=266.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|||+.|.+    ..+ .++.+.+++.+.+.... ..|++.  ..++++++++++...++.++++++|++  ++||++
T Consensus        27 ~~~i~~~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~--~~g~~~   96 (391)
T 3dzz_A           27 EKELPMWIAEM----DFK-IAPEIMASMEEKLKVAA-FGYESV--PAEYYKAVADWEEIEHRARPKEDWCVF--ASGVVP   96 (391)
T ss_dssp             TTCEECCSSCC----SSC-CCHHHHHHHHHHHTTCC-CCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEE--ESCHHH
T ss_pred             CCceeccccCC----CCC-CCHHHHHHHHHHHhcCc-CCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEE--CCCHHH
Confidence            47999999976    333 37999999988876543 667654  689999999998877776677899999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++.+++..  .+.+||+|+++.|+|.++...++..|.+++.+++. +..++.+|++.+++.+++  ++++++++++|+||
T Consensus        97 a~~~~~~~--l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~i~~p~np  172 (391)
T 3dzz_A           97 AISAMVRQ--FTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT--PSVRMMVFCNPHNP  172 (391)
T ss_dssp             HHHHHHHH--HSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS--TTEEEEEEESSBTT
T ss_pred             HHHHHHHH--hCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc--cCceEEEEECCCCC
Confidence            99998443  37799999999999999999999999999999885 344567899999999974  36777788999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEEEEe
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      ||.++|.+++++|+++|++||+++|+||+|.++.+.+.  ...++..+... .++++++.|+||.+|++|+|+||+  ++
T Consensus       173 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~--~~  248 (391)
T 3dzz_A          173 IGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE--DITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACA--II  248 (391)
T ss_dssp             TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC--CCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEE--EC
T ss_pred             CCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC--CceehhhcCccccCcEEEEEeChhhccccchhheEE--EE
Confidence            99999999999999999999999999999998886431  12222222211 357899999999999999999998  44


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSF  350 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~  350 (410)
                      +++++.+.+.......   ...+++..++.++...+.+.      .+++++.+++++++++++.+.|+ + ++.   +.+
T Consensus       249 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~~---~~~  315 (391)
T 3dzz_A          249 PNPDLRARAEESFFLA---GIGEPNLLAIPAAIAAYEEG------HDWLRELKQVLRDNFAYAREFLA-KEVPE---VKV  315 (391)
T ss_dssp             CSHHHHHHHHHHHHHH---TCSSCCTTHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCTT---SEE
T ss_pred             CCHHHHHHHHHHHHhh---ccCCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---cEE
Confidence            4578666665543211   22345556666665555432      23357888889999999999998 7 431   567


Q ss_pred             ccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          351 ILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       351 ~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..+.++++.|+.+     +. ++...+++++||.+.||.          ||+++. +++++++++++|+++++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~  389 (391)
T 3dzz_A          316 LDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGVLNL  389 (391)
T ss_dssp             CCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHTC
T ss_pred             eccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            7788888887643     43 445666656799998752          999986 9999999999999998765

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=3.3e-39  Score=310.08  Aligned_cols=369  Identities=18%  Similarity=0.228  Sum_probs=273.2

Q ss_pred             ccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKV   85 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~a   85 (410)
                      +.+++...++.+..+.+...+  .++.++|||+.|.+ +..+++  ++.+.+++.+.+...  ... |++..|..++|++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~   83 (407)
T 2zc0_A            8 AGRANWIKGSALADVMKKASELQKKGVKLISLAAGDP-DPELIP--RAVLGEIAKEVLEKEPKSVM-YTPANGIPELREE   83 (407)
T ss_dssp             CGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCC-CTTTSC--HHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHH
T ss_pred             hhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCC-CchhCC--HHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHH
Confidence            344555666655554444332  22237899999987 333333  588888888776432  124 8888899999999


Q ss_pred             HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      +++++...+|.++++++|++  |+||++++.++...+  +.+||+|+++.|+|..+...++..|.+++.+++.+ +  ++
T Consensus        84 la~~~~~~~g~~~~~~~v~~--t~g~t~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~--~~  156 (407)
T 2zc0_A           84 LAAFLKKYDHLEVSPENIVI--TIGGTGALDLLGRVL--IDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDN-D--GM  156 (407)
T ss_dssp             HHHHHHHHSCCCCCGGGEEE--ESHHHHHHHHHHHHH--CCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-T--EE
T ss_pred             HHHHHHHhcCCCCCcceEEE--ecCHHHHHHHHHHHh--cCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCC-C--CC
Confidence            99998665565566789999  999999999984433  67999999999999999999999999999998843 2  38


Q ss_pred             ChhhHHHHHh----cCCCCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          166 DFEGMIADIK----AAPGGSFIL-LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       166 d~~~l~~~i~----~~~~~~~~i-i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                      |++.+++.++    +. ++++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+.+.  ...++..+
T Consensus       157 d~~~l~~~l~~~~~~~-~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~  233 (407)
T 2zc0_A          157 RVDLLEEKIKELKAKG-QKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGG--DIVPLKAL  233 (407)
T ss_dssp             CHHHHHHHHHHHHHTT-CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCS--SCCCGGGG
T ss_pred             CHHHHHHHHHhhhccc-CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCC--CCCChhhc
Confidence            9999999887    42 245554 6899999999999999999999999999999999999999876421  11122222


Q ss_pred             hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHH-HH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK-AE  319 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~-~~  319 (410)
                       +..+++++++|+||.++ +|+|+||+++   ++++++.+....    .....+++.+++.++..+|++..    +. ++
T Consensus       234 -~~~~~~i~~~s~sK~~~-~G~r~G~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~----~~~~~  300 (407)
T 2zc0_A          234 -DNEGRVIVAGTLSKVLG-TGFRIGWIIA---EGEILKKVLMQK----QPIDFCAPAISQYIALEYLKRGY----FEKYH  300 (407)
T ss_dssp             -CSSCCEEEEEESTTTTC-TTSCCEEEEC---CHHHHHHHHHHH----TTTTSSSCHHHHHHHHHHHHTTH----HHHHT
T ss_pred             -CCCCCEEEEcccccccC-CCcceEEEec---CHHHHHHHHHHH----HhhcCCCCHHHHHHHHHHHHcCC----chHHH
Confidence             22357899999999999 9999999844   677666554432    22223456777777777777642    23 44


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCC----------C
Q 015283          320 MEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD----------G  383 (410)
Q Consensus       320 ~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~----------g  383 (410)
                      +++.+++++++++++.+.|+ +. +  + +.+..+.+++|+|+.+    +. ++.+.+++++||.+.|+          +
T Consensus       301 ~~~~~~~~~~~~~~l~~~L~-~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~  376 (407)
T 2zc0_A          301 LEGALLGYKEKRDIMLKALE-NHLP--N-AEFTKPIAGMFVMFFLPEGADGISFANELMEREGVVVVPGKPFYTDESGKN  376 (407)
T ss_dssp             TTTHHHHHHHHHHHHHHHHH-HHCT--T-SCBCCCSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HhCC--C-CEEecCCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCC
Confidence            67788889999999999998 64 2  1 4555677788888755    33 45667766569999874          2


Q ss_pred             --eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          384 --RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 --Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                        ||+++..+++++++++++|+++++++
T Consensus       377 ~iRis~~~~~~~~i~~~~~~l~~~l~~~  404 (407)
T 2zc0_A          377 AIRLNFSRPSKEEIPIGIKKLAKLYKEK  404 (407)
T ss_dssp             EEEEECSSSCTTHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence              99998657899999999999998754

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=1e-39  Score=311.74  Aligned_cols=341  Identities=12%  Similarity=0.091  Sum_probs=263.3

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ..++|+|+.|.+    +.+ .++.+.+++.+.+.... ..|.+  +..++++++++++.+.++..+++++|++  ++||+
T Consensus        31 ~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~--~~g~~  100 (391)
T 4dq6_A           31 TNDLLPMWVADM----DFK-AAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIY--SPGVI  100 (391)
T ss_dssp             CSCSEECCSSSC----SSC-CCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred             CCCceeccccCC----CCC-CCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEE--cCChH
Confidence            357899999976    433 37999999988876543 56654  5689999999998877776667889999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee--cCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY--DPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      +++.++..  ..+.+||+|+++.|+|.++...++..|.+++.+++.  +..++.+|++.+++.+++    ++++++++|+
T Consensus       101 ~a~~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~v~i~~p~  174 (391)
T 4dq6_A          101 PAISLLIN--ELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD----VKLFILCNPH  174 (391)
T ss_dssp             HHHHHHHH--HHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT----EEEEEEESSB
T ss_pred             HHHHHHHH--HhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc----CCEEEEECCC
Confidence            99999843  336799999999999999999999999999999986  345577999999999874    6777789999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      ||||.+++.+++++|+++|++||+++|+||+|.++.+.+..  ..++..+.. ..++++++.|+||.+|++|+|+||+  
T Consensus       175 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~--  250 (391)
T 4dq6_A          175 NPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHK--HIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYV--  250 (391)
T ss_dssp             TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC--CCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEE--
T ss_pred             CCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCC--ccCHHHcCccccCcEEEEEechhhccCcccceEEE--
Confidence            99999999999999999999999999999999998864321  112212211 1357899999999999999999998  


Q ss_pred             EeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCc
Q 015283          270 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDW  348 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~  348 (410)
                      +++++++.+.+.......   .+.+++..++.++...+.+.      .+++++.+++++++++++.+.|+ + ++.   +
T Consensus       251 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~~---~  317 (391)
T 4dq6_A          251 VLPDEKDYKLLDDAFTRI---DIKRNNCFSLVATEASYNNG------ESWLESFLEYLESNIDFAIKYIN-ENMPK---L  317 (391)
T ss_dssp             ECCSHHHHHHHHHHHHHT---TCCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCTT---S
T ss_pred             EeCCHHHHHHHHHHHHhh---cCCCCCHHHHHHHHHHHhch------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---C
Confidence            444557666665543311   23356666777666555532      23357888899999999999998 6 331   5


Q ss_pred             ccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          349 SFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       349 ~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      .+..+.++++.|+.+     +. ++...+++++||.+.||        +  ||+++. +++++++++++|+++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~  391 (391)
T 4dq6_A          318 KVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNAIN  391 (391)
T ss_dssp             EECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHHHC
T ss_pred             EecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHhC
Confidence            677788888887644     33 44666766559999875        2  999985 89999999999999863

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=4.9e-40  Score=313.11  Aligned_cols=357  Identities=17%  Similarity=0.130  Sum_probs=267.1

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      |.++.+++..++..+..+.+....   +++|||+.|.+    ..+ .++.+.+++.+.+..  ...|++..|..++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~l   70 (381)
T 1v2d_A            1 MRLHPRTEAAKESIFPRMSGLAQR---LGAVNLGQGFP----SNP-PPPFLLEAVRRALGR--QDQYAPPAGLPALREAL   70 (381)
T ss_dssp             CCCCGGGGGC---CHHHHHHHHHH---HTCEECCCCSC----SSC-CCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHH
T ss_pred             CchhhhhhhcCccHHHHHHHHHhc---CCeEEecCCCC----CCC-CCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHH
Confidence            344555666666655444433322   46899999987    222 368999999888755  36788777999999999


Q ss_pred             HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCccc
Q 015283           87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGL  165 (410)
Q Consensus        87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~  165 (410)
                      ++++..      +++++++  ++||++++.++...+  +.+||+|++++|+|..+...++..|.+++.+++.. .+++.+
T Consensus        71 a~~~~~------~~~~v~~--~~g~~~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~  140 (381)
T 1v2d_A           71 AEEFAV------EPESVVV--TSGATEALYVLLQSL--VGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRL  140 (381)
T ss_dssp             HHHHTS------CGGGEEE--ESSHHHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEEC
T ss_pred             HHhcCC------ChhhEEE--cCChHHHHHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCc
Confidence            999633      2678998  999999999984433  67999999999999999999999999999998741 234778


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      |++.+++.+.+   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ .  ...++..+  ..+
T Consensus       141 d~~~l~~~l~~---~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g-~--~~~~~~~~--~~~  212 (381)
T 1v2d_A          141 DLSALEKALTP---RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYG-E--RPRRLREF--APE  212 (381)
T ss_dssp             CHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS-S--CCCCHHHH--CTT
T ss_pred             CHHHHHHhcCc---CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccC-C--CCCCHHHh--cCC
Confidence            99999988864   5777777899999999999999999999999999999999999988752 1  11122222  446


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      .++++.|+||.+|++|+|+||+++   ++++++.+.....    ....+++...+.++...|+...    +.+++++.++
T Consensus       213 ~~~~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~  281 (381)
T 1v2d_A          213 RTFTVGSAGKRLEATGYRVGWIVG---PKEFMPRLAGMRQ----WTSFSAPTPLQAGVAEALKLAR----REGFYEALRE  281 (381)
T ss_dssp             TEEEEEEHHHHTTCGGGCCEEEEC---CTTTHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHHH----HTTHHHHHHH
T ss_pred             CEEEEeechhhcCCcccceEEEEe---CHHHHHHHHHHHh----hcccCCCcHHHHHHHHHHhCcc----cHHHHHHHHH
Confidence            899999999999999999999854   7777766654322    1123456666666666655321    1234578889


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCH-HHHHHhhhcCcEEEcCC----------C--eEEecCCCc
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK-AQSDNMTNKWHVYMTKD----------G--RISLAGLSL  392 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~  392 (410)
                      +++++++++.+.|+ +.|    +.+..+.+++|+|+.+.. + +.++++++||.+.|+          +  ||+++. ++
T Consensus       282 ~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~  354 (381)
T 1v2d_A          282 GYRRRRDLLAGGLR-AMG----LRVYVPEGTYFLMAELPGWD-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TE  354 (381)
T ss_dssp             HHHHHHHHHHHHHH-HTT----CCEECCSBSSEEEEECTTCC-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CH
T ss_pred             HHHHHHHHHHHHHH-HCC----CEecCCCcceEEEEecChHh-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CH
Confidence            99999999999998 776    466667778888876521 3 666667789999764          2  999988 99


Q ss_pred             ccHHHHHHHHHHHhhhc
Q 015283          393 AKCEYLADAIIDSYHNV  409 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++|++++++.
T Consensus       355 ~~i~~~~~~l~~~l~~~  371 (381)
T 1v2d_A          355 EELHLALERLGRVVNSP  371 (381)
T ss_dssp             HHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999987653

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=5.9e-40  Score=317.78  Aligned_cols=334  Identities=15%  Similarity=0.174  Sum_probs=252.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      +++|+|++|++    ..+ .++.+.+++.+.+..    .....|++..|.+++++++++++.+  +..+++++|++  ++
T Consensus        56 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~--t~  126 (432)
T 3ei9_A           56 AQVISLGIGDT----TEP-IPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFV--SD  126 (432)
T ss_dssp             CCCEECSSCCC----CSC-CCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEE--ES
T ss_pred             CCeEEccCCCC----CCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEE--CC
Confidence            47899999987    222 368888888777642    1225788888999999999999863  44556889999  99


Q ss_pred             ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC------------CccceeeecCCCcccChhhHHHHHhcC
Q 015283          110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV------------PWSEYRYYDPKTVGLDFEGMIADIKAA  177 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~  177 (410)
                      |+++++.++   ...+.+||.|++++|+|.++...++..|.            +++.+++.++.++..|++.      . 
T Consensus       127 G~~~al~~l---~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~-  196 (432)
T 3ei9_A          127 GAKCDISRL---QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------V-  196 (432)
T ss_dssp             CHHHHHHHH---HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------C-
T ss_pred             ChHHHHHHH---HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh------C-
Confidence            999999874   34467999999999999999988887774            5677777443344455443      1 


Q ss_pred             CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       ++++++++++|+||||.+++.+++++|+++|++||++||+||+|.++.+++.   ..++..+....+++++++|+||.+
T Consensus       197 -~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~  272 (432)
T 3ei9_A          197 -GRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN---PRSIFEIPGAEEVAMETASFSNYA  272 (432)
T ss_dssp             -CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC---CSSGGGSTTGGGTEEEEEESHHHH
T ss_pred             -CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC---CCChhhcCCCCCeEEEEecchhcc
Confidence             2455666689999999999999999999999999999999999999876521   222222222345789999999999


Q ss_pred             cccCCCcceEEEEeCCchh--------HHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDL--------AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      |++|+|+||+++   ++++        .+.+....    ...+.+++.+++.++...+.+..     .+++++.++++++
T Consensus       273 g~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~  340 (432)
T 3ei9_A          273 GFTGVRLGWTVI---PKKLLYSDGFPVAKDFNRII----CTCFNGASNISQAGALACLTPEG-----LEAMHKVIGFYKE  340 (432)
T ss_dssp             CTTTTCCEEEEC---CTTCBCTTSCBHHHHHHHHH----HHSCCCSCHHHHHHHHHHSSHHH-----HHHHHHHHHHHHH
T ss_pred             CCcccceEEEEE---ChHHhhcchHHHHHHHHHHh----ccccCCCCHHHHHHHHHHHhccc-----HHHHHHHHHHHHH
Confidence            999999999744   5554        44444322    22344677788888777776432     2346788899999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCC---C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccH
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKC  395 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i  395 (410)
                      +++++.+.|+ ++|    +.+..+..++|+|+.+   + .+++..+++++||.+.||        +  |||++. +++++
T Consensus       341 ~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l  414 (432)
T 3ei9_A          341 NTNIIIDTFT-SLG----YDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENI  414 (432)
T ss_dssp             HHHHHHHHHH-HTT----CCEEECSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHH
T ss_pred             HHHHHHHHHH-HCC----ceecCCCcceEEEEECCCCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHH
Confidence            9999999998 876    4666667788999866   2 356778888779999875        2  999877 99999


Q ss_pred             HHHHHHHHHHhhh
Q 015283          396 EYLADAIIDSYHN  408 (410)
Q Consensus       396 ~~~~~~l~~~l~~  408 (410)
                      ++++++|++-...
T Consensus       415 ~~~l~rl~~~~~~  427 (432)
T 3ei9_A          415 LEACRRFKQLYKH  427 (432)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhh
Confidence            9999999987543

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.9e-40  Score=319.24  Aligned_cols=349  Identities=14%  Similarity=0.160  Sum_probs=263.8

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCc-ccCCceEEEecC
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQRVATVQGL  109 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~-~~~~~i~~~~t~  109 (410)
                      .+++|||+.|.+ +..+++  ++.+.+++.+.+...  ....|++..|..++|+++++++...+|.. +++++|++  |+
T Consensus        42 ~~~~idl~~g~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~--t~  116 (425)
T 1vp4_A           42 DKDAISFGGGVP-DPETFP--RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIF--TV  116 (425)
T ss_dssp             STTCEECCCCSC-CGGGSC--HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEE--EE
T ss_pred             CCCceeCCCCCC-CcccCC--HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEE--ec
Confidence            467899999987 322333  588888888776432  12578888899999999999985544544 56789999  99


Q ss_pred             ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-----CCCcEEE
Q 015283          110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-----PGGSFIL  184 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~~~~i  184 (410)
                      |+++++.++..  ..+.+||+|++++|+|..+...++..|.+++.+++.+ +  ++|++.+++.+++.     +.+++++
T Consensus       117 G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~--~~d~~~l~~~l~~~~~~~~~~~~~~v  191 (425)
T 1vp4_A          117 GSQQALDLIGK--LFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLED-D--GMDLNVLERKLSEFDKNGKIKQVKFI  191 (425)
T ss_dssp             HHHHHHHHHHH--HHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-T--EECHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred             cHHHHHHHHHH--HhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCC-C--CCCHHHHHHHHHhhhhcccCCCceEE
Confidence            99999999843  3367999999999999999999999999999999843 2  48999999888641     1245565


Q ss_pred             -EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC
Q 015283          185 -LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER  263 (410)
Q Consensus       185 -i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  263 (410)
                       ++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++.  ...++..+ +..+++++++|+||.++ +|+|
T Consensus       192 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~-~~~~~~i~~~s~sK~~~-~G~r  267 (425)
T 1vp4_A          192 YVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE--TVDPIFKI-GGPERVVLLNTFSKVLA-PGLR  267 (425)
T ss_dssp             EEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSC--CCCCHHHH-HCTTTEEEEEESTTTTC-GGGC
T ss_pred             EECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC--CCcCHHHh-CCCCCEEEEeccccccc-cccc
Confidence             5799999999999999999999999999999999999999886421  11223222 33468999999999999 9999


Q ss_pred             cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-
Q 015283          264 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-  342 (410)
Q Consensus       264 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-  342 (410)
                      +||+++   ++++++.+.....    ....+++.+++.++...|++..    +.+++++.+++++++++++.+.|+ +. 
T Consensus       268 ~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~~l~~~L~-~~~  335 (425)
T 1vp4_A          268 IGMVAG---SKEFIRKIVQAKQ----SADLCSPAITHRLAARYLERYD----LLEQLKPTIELYRRKRTVMLNALE-EYF  335 (425)
T ss_dssp             EEEEEC---CHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHHHSC----HHHHTHHHHHHHHHHHHHHHHHHH-HHS
T ss_pred             eEEEee---CHHHHHHHHHHhh----hhcCCCCHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHHHHHHHH-HhC
Confidence            999854   6776666654332    1223457777787777776532    244567888999999999999998 65 


Q ss_pred             CCCCCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC----------C--eEEecCCCcccHHHHHHHHHHH
Q 015283          343 KSGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       343 g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      +....+.+..+.+++|+|+.+.     .++.+.++++ ||.+.|+          +  ||+++..+++++++++++|+++
T Consensus       336 ~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~  414 (425)
T 1vp4_A          336 SDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREV  414 (425)
T ss_dssp             TTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred             CCCCceEEecCCccEEEEEEcCCCCCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence            1000145566778889887542     3456777775 9999763          2  9999876789999999999998


Q ss_pred             hhh
Q 015283          406 YHN  408 (410)
Q Consensus       406 l~~  408 (410)
                      +++
T Consensus       415 l~~  417 (425)
T 1vp4_A          415 VLE  417 (425)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            865

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=2.5e-39  Score=310.15  Aligned_cols=344  Identities=12%  Similarity=0.097  Sum_probs=261.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|+|+.|.+    +.+ .++.+.+++.+.+.... ..|++.  ..++|+++++++...++..+++++|++  |+||++
T Consensus        31 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--t~g~~~  100 (399)
T 1c7n_A           31 NEVVPLSVADM----EFK-NPPELIEGLKKYLDETV-LGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIIN--TAGVVP  100 (399)
T ss_dssp             TTCCCCCSSSC----SSC-CCHHHHHHHHHHHHHCC-CSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEE--ESSHHH
T ss_pred             CCceeeeecCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEE--cCCHHH
Confidence            46899999886    333 36889999888775433 668653  899999999998665565566789999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++.+++..  .+.+||+|++++|+|.++...++..|.+++.+++.+++ ++.+|++.+++.+++  ++++++++++|+||
T Consensus       101 a~~~~~~~--l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~np  176 (399)
T 1c7n_A          101 AVFNAVRE--FTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD--KNNKALLFCSPHNP  176 (399)
T ss_dssp             HHHHHHHH--HCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC--TTEEEEEEESSBTT
T ss_pred             HHHHHHHH--hcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc--CCCcEEEEcCCCCC
Confidence            99998443  36799999999999999999999999999998875333 466899999999974  35677778999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEEEe
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      ||.++|.+++++|+++|++||+++|+||+|.++.+++.  ...++..+.. ..++++++.|+||.+|++|+|+||+  ++
T Consensus       177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~~  252 (399)
T 1c7n_A          177 VGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY--EHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI--II  252 (399)
T ss_dssp             TTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE--EC
T ss_pred             CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CcccHHHcCccccCcEEEEEeChhhccccchheEEE--EE
Confidence            99999999999999999999999999999999886421  1112212111 1357899999999999999999998  44


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSF  350 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~  350 (410)
                      +++++++++.......   .+.+++.+++.++...|++.      .+++++.+++++++++++.+.|+ + ++.   +.+
T Consensus       253 ~~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~~---~~~  319 (399)
T 1c7n_A          253 KNPDIRERFTKSRDAT---SGMPFTTLGYKACEICYKEC------GKWLDGCIKVIDKNQRIVKDFFE-VNHPE---IKA  319 (399)
T ss_dssp             CCHHHHHHHHHHHHHT---TCCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCTT---SBC
T ss_pred             CCHHHHHHHHHHHhhc---ccCCCCHHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hhCCC---CeE
Confidence            4466666665533211   12356777777776666532      23457788889999999999998 7 531   466


Q ss_pred             ccCCcceeeecCC-----CHH-HHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          351 ILRQIGMFSFTGL-----NKA-QSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       351 ~~~~~~~~~~~~~-----~~~-~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..+.++++.|+.+     +.. +...+++++||.+.|+        +  ||+++. +++++++++++|+++++++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~  393 (399)
T 1c7n_A          320 PLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDL  393 (399)
T ss_dssp             CCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHHHH
Confidence            6778888877644     333 4566665679999875        2  999987 6889999999999988754

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.3e-39  Score=314.99  Aligned_cols=346  Identities=14%  Similarity=0.096  Sum_probs=254.9

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHH--HHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAE--NLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~--~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .+..|||+.|.| +... .+.++.+.++.  .+.+..  .....|++..|.+++|+++++++.      +++++|++  |
T Consensus        32 ~~~~i~~~~G~p-~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~------~~~~~i~~--t  101 (427)
T 3ppl_A           32 KNLKLDLTRGKP-SSEQ-LDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLG------VPVEQVLA--G  101 (427)
T ss_dssp             TCCCEECCCCSC-CHHH-HHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHT------SCGGGEEE--C
T ss_pred             CCceEecCCCCC-ChHH-CCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhC------CCcceEEE--e
Confidence            356899999988 1111 11123566665  554433  124789888999999999999972      34789999  9


Q ss_pred             CChhhHH--HHHHHHHHHhC--C----------CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283          109 LSGTGSL--RLAAALIERYF--P----------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI  174 (410)
Q Consensus       109 ~ggt~a~--~~~~~~~~~~~--~----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i  174 (410)
                      +|+++++  +++...+  +.  +          ||+|++++|+|..+...++..|.+++.+|+.+ +  ++|++.+++.+
T Consensus       102 ~G~~~al~~~~~~~~l--~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~-~--g~d~~~l~~~l  176 (427)
T 3ppl_A          102 DASSLNIMFDVISWSY--IFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNE-D--GPDMDAVEELV  176 (427)
T ss_dssp             SSCHHHHHHHHHHHHH--HHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEET-T--EECHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHHH--hccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCC-C--CCCHHHHHHHH
Confidence            9999999  4653333  33  5          89999999999999999999999999999853 2  48999999998


Q ss_pred             hcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHH-HHcCCcccccccCCCCCCCCCCCchhHhHHH---hhcCCcEEE
Q 015283          175 KAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVI-QEKNHIPFFDVAYQGFASGSLDNDASSVRLF---ATRGMELLV  249 (410)
Q Consensus       175 ~~~~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~~-~~~~~~li~Deay~~~~~~~~~~~~~~~~~~---~~~~~~~i~  249 (410)
                      +.  +++++++ .++||||||.+++.+++++|+++| ++||++||+||+|..+.+.+......++..+   .+..+++++
T Consensus       177 ~~--~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  254 (427)
T 3ppl_A          177 KN--PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWA  254 (427)
T ss_dssp             TS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEE
T ss_pred             hc--CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEE
Confidence            53  3555655 558899999999999999999999 9999999999999997654222111122222   124568999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN-PALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~~  328 (410)
                      ++||||. +++|+|+||++.   ++++++.+.....    ....+++.+.|.++..++.+ +.    +.+++++.++.++
T Consensus       255 ~~S~SK~-~~~G~r~G~~~~---~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~  322 (427)
T 3ppl_A          255 FTSTSKI-TLAGAGVSFFLT---SAENRKWYTGHAG----IRGIGPNKVNQLAHARYFGDAEG----VRAVMRKHAASLA  322 (427)
T ss_dssp             EEESTTT-SCTTSSCEEEEC---CHHHHHHHHHHHH----HHCSCCCHHHHHHHHHHHCSHHH----HHHHHHHHHHHHH
T ss_pred             Eechhhc-cCcCccEEEEEc---CHHHHHHHHHHhh----cccCCCCHHHHHHHHHHHhChhh----HHHHHHHHHHHHH
Confidence            9999999 679999999744   7776666554332    22346788888888888887 33    3455677778888


Q ss_pred             HHHHHHHHHhhhc-cCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC----------C----eEEecCC
Q 015283          329 NVRQKLFDSLSAK-DKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD----------G----RISLAGL  390 (410)
Q Consensus       329 ~~~~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~----------g----Ris~~~~  390 (410)
                      ++++.+.+.|. + ++..+.+.+..+.+|+|+|+.+.   .+.+.+.+.++||.+.|+          +    ||+++..
T Consensus       323 ~~~~~l~~~L~-~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~  401 (427)
T 3ppl_A          323 PKFNKVLEILD-SRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP  401 (427)
T ss_dssp             HHHHHHHHHHH-HHHGGGTCCEECCCSBSSCEEEECSTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS
T ss_pred             HHHHHHHHHHH-HhcCCCCceEEeCCCccEEEEEECCcchHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC
Confidence            88887777775 3 21000145667888999998663   444555556679999982          1    9999876


Q ss_pred             CcccHHHHHHHHHHHhhh
Q 015283          391 SLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++++|++++++
T Consensus       402 ~~~~i~~~~~~l~~~l~~  419 (427)
T 3ppl_A          402 PVEELEVAMDGVATCVLL  419 (427)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            889999999999998865

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=8.7e-40  Score=313.43  Aligned_cols=359  Identities=15%  Similarity=0.135  Sum_probs=253.6

Q ss_pred             ccccCCCCCCC-CCcccchhHhhh----cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCcCCcc
Q 015283            8 SRFEGVTMAPP-DPILGVSEAFKA----DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEG   78 (410)
Q Consensus         8 ~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g   78 (410)
                      +..+++...++ .++..+.++...    ..++++|+|+.|.+    ..+ .++.+.+++.+.+..    .....|.+..|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g   76 (400)
T 3asa_A            2 KRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDT----TQP-LNASVAEAFASSIARLSSPTTCRGYGPDFG   76 (400)
T ss_dssp             CCCHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCC----CCC-CCHHHHHHHHHHHHHHTSSSCCCCCCCTTC
T ss_pred             ccchhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCC----CCC-CCHHHHHHHHHHHhcccccccccCCCCCCC
Confidence            34445555555 223333333332    23467899999986    322 367888887776532    11356877789


Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC-ccceee
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP-WSEYRY  157 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~  157 (410)
                      .+++|+++++++.  .+. +++++|++  ++|+++++.++.   ..+.+||+|++++|+|..+...++..|.+ ++.+++
T Consensus        77 ~~~lr~~la~~l~--~g~-~~~~~v~~--~~G~~~al~~~~---~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  148 (400)
T 3asa_A           77 LPALRQKLSEDFY--RGF-VDAKEIFI--SDGAKVDLFRLL---SFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPC  148 (400)
T ss_dssp             CHHHHHHHHHTTS--TTS-SCGGGEEE--ESCHHHHHHHHH---HHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEEC
T ss_pred             CHHHHHHHHHHHH--cCC-CCHHHEEE--ccChHHHHHHHH---HHcCCCCEEEECCCCcHHHHHHHHHcCCcceEeccc
Confidence            9999999999964  343 45789999  999999999863   34579999999999999999999999998 888887


Q ss_pred             ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh
Q 015283          158 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV  237 (410)
Q Consensus       158 ~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~  237 (410)
                      .++.++..|++.+        ++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++.  ....+
T Consensus       149 ~~~~~~~~~l~~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~  218 (400)
T 3asa_A          149 LQENAFFPEFPED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPS--LPKSI  218 (400)
T ss_dssp             CGGGTTCCCCCTT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTT--SCSSG
T ss_pred             chhcCcccChhhc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCC--CCCch
Confidence            5333344444321        2445566679999999999999999999999999999999999998875421  11112


Q ss_pred             HHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh-------HHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL-------AARVKSQLKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       238 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                      ..+....+++++++|+||.+|++|+|+||+++   ++++       ++.+.....   ...+.+++.+++.++..+|++.
T Consensus       219 ~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~  292 (400)
T 3asa_A          219 FEIPDARFCAIEINSFSKPLGFAGIRLGWTVI---PQELTYADGHFVIQDWERFL---STTFNGASIPAQEAGVAGLSIL  292 (400)
T ss_dssp             GGSTTGGGTEEEEEECCGGGTTTTCCCEEEEC---CTTCBCTTSCBHHHHHHHHH---HHHCCCCCHHHHHHHHHHHHHT
T ss_pred             hhCCCCCCceEEEecchhhcCCcchheeEEee---ChhhccchhhhHHHHHHHHh---ccCccCCChHHHHHHHHHhCcH
Confidence            11111234689999999999999999999844   5565       455433221   1123356777777776666543


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-CC-----HHHHHHhhhcCcEEEcCC--
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-LN-----KAQSDNMTNKWHVYMTKD--  382 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~ll~~~gi~v~~~--  382 (410)
                              ++++.+++++++++++.+.|+ +.|    +.+..+.+++|+|+. +.     .+++.++++++||.+.||  
T Consensus       293 --------~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~  359 (400)
T 3asa_A          293 --------PQLEAIHYYRENSDLLRKALL-ATG----FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIG  359 (400)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHH-HTT----CEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGG
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHH-HCC----CeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhH
Confidence                    135778888999999999998 776    466666678888876 42     246677777679999875  


Q ss_pred             ------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          383 ------G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 ------g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                            +  ||++.. +++++++++++|++++++.
T Consensus       360 f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~  393 (400)
T 3asa_A          360 FGRSGSGFVRFSSLG-KREDILAACERLQMAPALQ  393 (400)
T ss_dssp             GCGGGTTCEEEECCS-CHHHHHHHHHHHHC-----
T ss_pred             hCCCCCCEEEEEeeC-CHHHHHHHHHHHHHHHHhh
Confidence                  2  999655 8999999999999988764

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=3.8e-39  Score=311.03  Aligned_cols=343  Identities=14%  Similarity=0.080  Sum_probs=266.8

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ..++|+|+.|++    ..+ .+|.+.+++.+.+.... ..|.+.  ..++++++++++...++..+++++|++  ++|++
T Consensus        60 g~~~i~~~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~--~~g~~  129 (421)
T 3l8a_A           60 NPELLQMWVADM----DFL-PVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILF--IDGVV  129 (421)
T ss_dssp             CTTCEECCSSCC----CSC-CCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred             CCCeeecccCCC----CCC-CCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEE--cCCHH
Confidence            457899999976    333 37899999988876543 567543  379999999998877776677899999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++.+++.+  +.+||+|+++.|+|.++...++..|.+++.+|+. ....+.+|++.+++.+++  ++++++++++|+|
T Consensus       130 ea~~~a~~~~--~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~--~~~~~vil~~p~n  205 (421)
T 3l8a_A          130 PAISIALQAF--SEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID--NNVKIYLLCSPHN  205 (421)
T ss_dssp             HHHHHHHHHH--SCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH--TTEEEEEEESSBT
T ss_pred             HHHHHHHHHh--cCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc--cCCeEEEECCCCC
Confidence            9999985443  6799999999999999999999999999999885 345577899999999984  3678888899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCcceEEEE
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      |||.+++.+++++|+++|++||+++|+||+|.++.+.+..  ..++..+. +..++++++.|+||.+|++|+|+||+  +
T Consensus       206 ptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~--~  281 (421)
T 3l8a_A          206 PGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT--HHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA--I  281 (421)
T ss_dssp             TTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEE--E
T ss_pred             CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC--CccHHHcCchhcCcEEEEEeChhhccCchhheEeE--E
Confidence            9999999999999999999999999999999999865321  11221221 22468899999999999999999998  4


Q ss_pred             eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                      ++++++.+.+......   ..+.+++.+++.++...++..      .+.+++.+++++++++++.+.|+ +.+  + +..
T Consensus       282 ~~~~~l~~~~~~~~~~---~~~~~~n~~~~~a~~aal~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~--~-i~~  348 (421)
T 3l8a_A          282 IQNESLRRKFQYRQLA---NNQHEVPTVGMIATQAAFQYG------KPWLEELKTVIEGNIKLVIKELE-AKT--K-IKV  348 (421)
T ss_dssp             CCSHHHHHHHHHHHHH---TTCSCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHC--S-CEE
T ss_pred             cCCHHHHHHHHHHHHh---cccCCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHH-hCC--C-ceE
Confidence            4447866666543321   123356677777766665532      23357888899999999999998 762  1 567


Q ss_pred             ccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          351 ILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       351 ~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      ..+.++++.|+.+     + .++...+++++||.+.+|        +  ||+++. +++++++++++|+++++
T Consensus       349 ~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          349 MEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT-PKNTVQEALSRIISVFG  420 (421)
T ss_dssp             ECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred             eCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence            7888888888754     2 355677777789999874        2  999986 99999999999999875

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=1.8e-38  Score=304.03  Aligned_cols=361  Identities=17%  Similarity=0.191  Sum_probs=265.7

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia   87 (410)
                      +.+.....+..+..+.   ....++++|||+.|.+ +..+++  ++.+.+++.+.+...  ....|++..|..++|++++
T Consensus        11 ~~~~~~~~~~~~~~~~---~~~~~~~~i~l~~g~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la   84 (397)
T 2zyj_A           11 GKGAGRIQASTIRELL---KLTQRPGILSFAGGLP-APELFP--KEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVA   84 (397)
T ss_dssp             CGGGGGCCCCHHHHHH---HHHTSTTCEEESSCCC-CGGGCC--HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHH
T ss_pred             hhhhcccCchHHHHHH---hhccCCCceecCCCCC-CchhCC--HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHH
Confidence            3444444444333322   2233467899999986 222222  578888887776431  1256877789999999999


Q ss_pred             HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283           88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF  167 (410)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  167 (410)
                      +++.      +++++|++  ++|+++++.++...  .+.+||+|++++|+|..+...++..|.+++.+++.+ +  ++|+
T Consensus        85 ~~~g------~~~~~v~~--~~g~~~al~~~~~~--~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~--~~d~  151 (397)
T 2zyj_A           85 EWIG------VRPEEVLI--TTGSQQALDLVGKV--FLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE-E--GPDL  151 (397)
T ss_dssp             HHHT------SCGGGEEE--ESHHHHHHHHHHHH--HCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET-T--EECH
T ss_pred             HHhC------CChhhEEE--eccHHHHHHHHHHH--hCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCC-C--CCCH
Confidence            9972      23678999  99999999998443  367999999999999999999999999999998843 2  3899


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc--CC
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR--GM  245 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~--~~  245 (410)
                      +.+++.+++. +...++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+.  ...++..+...  .+
T Consensus       152 ~~l~~~l~~~-~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~  228 (397)
T 2zyj_A          152 DALEEVLKRE-RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA--RLPSLFELAREAGYP  228 (397)
T ss_dssp             HHHHHHHHHC-CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC--CCCCHHHHHHHHTCC
T ss_pred             HHHHHHHhhc-CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC--CCCchhhhCcccCCC
Confidence            9999998752 1233346799999999999999999999999999999999999999886421  11222232222  15


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      ++++++|+||.++ +|+|+||+++   ++++++.+.....    ....+++.+++.++...|++..    | +++++.++
T Consensus       229 ~~i~~~s~sK~~~-~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~~----~-~~~~~~~~  295 (397)
T 2zyj_A          229 GVIYLGSFSKVLS-PGLRVAFAVA---HPEALQKLVQAKQ----GADLHTPMLNQMLVHELLKEGF----S-ERLERVRR  295 (397)
T ss_dssp             CEEEEEESTTTTC-GGGCCEEEEC---CHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHTTTH----H-HHHHHHHH
T ss_pred             eEEEEeccccccc-ccceeEEEec---CHHHHHHHHHHHH----hhcCCCCHHHHHHHHHHHHhCC----H-HHHHHHHH
Confidence            7899999999999 9999999854   6776666654322    1223457778888888888653    2 45678889


Q ss_pred             HHHHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCC----------C--eEEe
Q 015283          326 RIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD----------G--RISL  387 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~----------g--Ris~  387 (410)
                      +++++++++.+.|+ +. +  ..+.+..+.+++|+|+.+    +. ++.+.++++ ||.+.|+          +  ||++
T Consensus       296 ~~~~~~~~l~~~L~-~~~~--~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~  371 (397)
T 2zyj_A          296 VYREKAQAMLHALD-REVP--KEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSY  371 (397)
T ss_dssp             HHHHHHHHHHHHHH-HHSC--TTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEEC
T ss_pred             HHHHHHHHHHHHHH-HHCC--CCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEc
Confidence            99999999999998 64 2  014555677888888754    33 456666664 9999874          2  9999


Q ss_pred             cCCCcccHHHHHHHHHHHhhhc
Q 015283          388 AGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       388 ~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +..+++++++++++|+++++++
T Consensus       372 ~~~~~~~i~~~~~~l~~~l~~~  393 (397)
T 2zyj_A          372 ATLDREGIAEGVRRLGRALKGL  393 (397)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH
Confidence            8767899999999999988653

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=3.3e-38  Score=298.71  Aligned_cols=323  Identities=12%  Similarity=0.054  Sum_probs=252.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +++|+|+.|++    ..+ .++.+.+++.+.+..  ...|++..+ .++|+++++++.      +++++|++  ++||++
T Consensus        30 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~~------~~~~~v~~--~~g~~~   93 (365)
T 3get_A           30 KEVIKLASNEN----PFG-TPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKYK------VQNENIII--GAGSDQ   93 (365)
T ss_dssp             SCCEECSSCCC----TTC-SCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHHT------CCGGGEEE--ESSHHH
T ss_pred             CceEEecCCCC----CCC-CCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHhC------CCcceEEE--CCCHHH
Confidence            57899999987    222 378999999888763  367866555 899999999973      23689999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.++..  ..+.+||+|+++.|+|..+...++..|.+++.+++ +.+++ +|++++++.++.   +++++++++|+|||
T Consensus        94 a~~~~~~--~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~---~~~~v~~~~p~npt  166 (365)
T 3get_A           94 VIEFAIH--SKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKD---EIKLIFLCLPNNPL  166 (365)
T ss_dssp             HHHHHHH--HHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTT---TEEEEEEESSCTTT
T ss_pred             HHHHHHH--HHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCC---CCCEEEEcCCCCCC
Confidence            9999843  33679999999999999999999999999999987 45667 999999999874   67788889999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCC--CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |.+++.+++++|+++| ++|+++|+||+|.++.+  .+.  ...+........+++++++|+||.+|++|+|+||+++  
T Consensus       167 G~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~--  241 (365)
T 3get_A          167 GECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSK--KHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA--  241 (365)
T ss_dssp             CCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGG--GCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE--
T ss_pred             CCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCc--ccccHhHHhccCCCEEEEeecchHhcCcchheEEEEc--
Confidence            9999999999999999 57999999999987763  211  1112223344567899999999999999999999855  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++++...    .. . .+++..++.++...|++.       +++++.+++++++++++.+.|+ +.+    +.+.
T Consensus       242 -~~~~~~~~~~~----~~-~-~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~-~~g----~~~~  302 (365)
T 3get_A          242 -NANIISAFYKL----RA-P-FNVSNLALKAAVAAMDDD-------EFTEKTLENNFSQMELYKEFAK-KHN----IKII  302 (365)
T ss_dssp             -CHHHHHHHHHH----SC-T-TCSCHHHHHHHHHHHTCH-------HHHHHHHHHHHHHHHHHHHHHH-HTT----CEEC
T ss_pred             -CHHHHHHHHHh----cC-C-CCcCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHH-hCC----CEEC
Confidence             88866555442    22 2 247777888888888864       2357888899999999999998 876    4555


Q ss_pred             cCCcceeeecCC---CHHH-HHHhhhcCcEEEcCCC-------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          352 LRQIGMFSFTGL---NKAQ-SDNMTNKWHVYMTKDG-------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       352 ~~~~~~~~~~~~---~~~~-~~~ll~~~gi~v~~~g-------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      ++. +.|+|+.+   +.+. ...+. ++||.+.++.       ||+++  ++++++++++.|+++++
T Consensus       303 ~~~-~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~iRis~~--~~~~i~~l~~~l~~~l~  365 (365)
T 3get_A          303 DSY-TNFITYFFDEKNSTDLSEKLL-KKGIIIRNLKSYGLNAIRITIG--TSYENEKFFTEFDKILR  365 (365)
T ss_dssp             CCS-SSEEEEECSSSCHHHHHHHHH-TTTEECEECGGGTCSEEEEECC--CHHHHHHHHHHHHHHHC
T ss_pred             CCC-CeEEEEECCCCCHHHHHHHHH-HCCEEEEECccCCCCEEEEEcC--CHHHHHHHHHHHHHHhC
Confidence            444 55677755   4444 45555 4699998863       99985  78999999999998863

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=4.4e-38  Score=296.51  Aligned_cols=325  Identities=17%  Similarity=0.210  Sum_probs=254.5

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      .+.+|+|+.|.+    ..+ .++.+.+++.+.+..  ...| +..+.+++|+++++++.      +++++|++  ++||+
T Consensus        15 ~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~~------~~~~~i~~--~~g~~   78 (354)
T 3ly1_A           15 TDNPIRINFNEN----PLG-MSPKAQAAARDAVVK--ANRY-AKNEILMLGNKLAAHHQ------VEAPSILL--TAGSS   78 (354)
T ss_dssp             SSSCEECSSCCC----SSC-CCHHHHHHHHHTGGG--TTSC-CHHHHHHHHHHHHHHTT------SCGGGEEE--ESHHH
T ss_pred             CCceEEccCCCC----CCC-CCHHHHHHHHHHHhh--CcCC-CCCchHHHHHHHHHHhC------CChHHEEE--eCChH
Confidence            467899999986    333 379999999888764  3667 56788999999999963      23689999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++.++...  .+.+||+|+++.|+|.++...++..|.+++.+++.  .++.+|++.+++.+++. ++++++++++|+||
T Consensus        79 ~a~~~~~~~--l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~~-~~~~~v~l~~p~np  153 (354)
T 3ly1_A           79 EGIRAAIEA--YASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKML--DNWAFDIEGLKAAVAAY-SGPSIVYLVNPNNP  153 (354)
T ss_dssp             HHHHHHHHH--HCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHHHTC-SSCEEEEEESSCTT
T ss_pred             HHHHHHHHH--HhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhccC-CCCCEEEEeCCCCC
Confidence            999998433  36799999999999999999999999999999883  35889999999999831 26777777899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC-CcEEEEecccccccccCCCcceEEEEe
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG-MELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      ||.+++.+++++|+++| ++|+++|+||+|.++.+.+.   ..+........ +++++++|+||.+|++|+|+||+++  
T Consensus       154 tG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~--  227 (354)
T 3ly1_A          154 TGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPR---FRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA--  227 (354)
T ss_dssp             TCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTT---CCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC--
T ss_pred             cCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccc---cCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec--
Confidence            99999999999999999 89999999999998876431   11222333444 7899999999999999999999744  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       +++++++    +......  .+++..++.++...|++.       +++++.+++++++++++.+.|+ +.+    +.+.
T Consensus       228 -~~~~~~~----~~~~~~~--~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~-~~~----~~~~  288 (354)
T 3ly1_A          228 -HPTVIAL----MGRYVAG--EKINFSGVDAALASMNDS-------AFITYSKKSNDVSRQILLKALE-DLK----LPYL  288 (354)
T ss_dssp             -CHHHHHH----HGGGTTC--SCCCHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHHHHHH-HHT----CCBC
T ss_pred             -CHHHHHH----HHHhcCC--CCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHH-HCC----CeEC
Confidence             7774444    4433332  367777788888888864       2356888899999999999998 776    3444


Q ss_pred             cCCcceeeecCC--CHHH-HHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          352 LRQIGMFSFTGL--NKAQ-SDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       352 ~~~~~~~~~~~~--~~~~-~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++ .+.|+|+.+  +.+. ...+. ++||.+. +      +  ||+++  +++++++++++|++++++
T Consensus       289 ~~-~~~~~~~~~~~~~~~~~~~l~-~~gi~v~-g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          289 PS-EGNFVFHQLVVPLKDYQTHMA-DAGVLIG-RAFPPADNWCRISLG--TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             CC-CSSEEEEECSSCHHHHHHHHH-HTTEECC-CCCTTCTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred             CC-CceEEEEECCCCHHHHHHHHH-HCCEEEe-ecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence            44 566788766  3444 45555 4799988 3      2  99985  789999999999999875

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=1.2e-38  Score=307.59  Aligned_cols=343  Identities=16%  Similarity=0.098  Sum_probs=252.0

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhh--ccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLML--ERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      .+|||+.|.| +....+ .++.+.+++.+..  ... ....|++..|.+++|+++++++.      +++++|++  |+|+
T Consensus        33 ~~i~l~~g~~-~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~------~~~~~i~~--t~G~  102 (422)
T 3d6k_A           33 LSLDLTRGKP-SAEQLD-LSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALG------LPADLVVA--QDGS  102 (422)
T ss_dssp             CCEECCCCSC-CHHHHH-TTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHT------CCGGGEEE--CSSC
T ss_pred             CeEeCCCCCC-ChhhCC-CcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhC------CChhHEEE--ecch
Confidence            5899999997 111123 2556777665542  121 23689999999999999999973      34789999  9999


Q ss_pred             hhHH--HHHHHHHHHhCC------------CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283          112 TGSL--RLAAALIERYFP------------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA  177 (410)
Q Consensus       112 t~a~--~~~~~~~~~~~~------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~  177 (410)
                      ++++  .++...+  ..+            ||+|++++|+|..|...++..|++++.+++.+ +  ++|++.+++.+++ 
T Consensus       103 ~~al~l~~~~~~l--~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~--g~d~~~l~~~l~~-  176 (422)
T 3d6k_A          103 SLNIMFDLISWSY--TWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTD-E--GPDMGVVRELVKD-  176 (422)
T ss_dssp             HHHHHHHHHHHHH--HHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEET-T--EECHHHHHHHHTS-
T ss_pred             HHHHHHHHHHHHh--cCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCC-C--CCCHHHHHHHHhc-
Confidence            9987  4543333  224            34799999999999999999999999999853 2  4899999999864 


Q ss_pred             CCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHH-HcCCcccccccCCC--CCCCCCCCchhHhHHH---hhcCCcEEEE
Q 015283          178 PGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVAYQG--FASGSLDNDASSVRLF---ATRGMELLVA  250 (410)
Q Consensus       178 ~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~~~-~~~~~li~Deay~~--~~~~~~~~~~~~~~~~---~~~~~~~i~~  250 (410)
                       .++++++ +++||||||.+++.+++++|+++|+ +||++||+||+|..  |...+  ....++..+   .+..++++++
T Consensus       177 -~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~  253 (422)
T 3d6k_A          177 -PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEF--PIVHNVIEFAQAAGNPNRFWFM  253 (422)
T ss_dssp             -TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC--CCCCCHHHHHHHTTCTTCEEEE
T ss_pred             -CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCC--CCCcChhhHhhccCCCCcEEEE
Confidence             2455555 7999999999999999999999999 99999999999986  44321  111122121   2345689999


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +||||. +++|+|+||+++   ++++++.+.....    ....+++.++|.++..+|++.   +.|.+++++.++.++++
T Consensus       254 ~S~SK~-~~~GlriG~~~~---~~~l~~~l~~~~~----~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~  322 (422)
T 3d6k_A          254 SSTSKI-THAGSGVSFFAS---SKENIEWYASHAN----VRGIGPNKLNQLAHAQFFGDV---AGLKAHMLKHAASLAPK  322 (422)
T ss_dssp             EESTTT-SCTTSSCEEEEC---CHHHHHHHHHHHH----HHCSCCCHHHHHHHHHHHCSH---HHHHHHHHHHHHHHHHH
T ss_pred             cChhhh-cCcccceEEEEe---CHHHHHHHHHHHH----hhcCCCCHHHHHHHHHHHhCc---chHHHHHHHHHHHHHHH
Confidence            999999 679999999854   7776666554332    223457788888888888872   12456677888888888


Q ss_pred             HHHHHHHhhhcc-CCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCC------------C--eEEecCCCc
Q 015283          331 RQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKD------------G--RISLAGLSL  392 (410)
Q Consensus       331 ~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~------------g--Ris~~~~~~  392 (410)
                      ++.+.+.|. +. +..+.+.+..+.+++|+|+.+   +.+.+.++++++||.+.|+            +  |||++..++
T Consensus       323 ~~~l~~~L~-~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~  401 (422)
T 3d6k_A          323 FERVLEILD-SRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPV  401 (422)
T ss_dssp             HHHHHHHHH-HHHGGGTCEEECCCSBSSCEEEEESTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCH
T ss_pred             HHHHHHHHH-HhcCcCCceEEeCCCcceEEEEECCCCCHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCH
Confidence            888887776 42 100013555678899999865   2455556666789999882            2  999985589


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++|++++++
T Consensus       402 e~i~~~~~~l~~~l~~  417 (422)
T 3d6k_A          402 AELEVAMDGFATCVLM  417 (422)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998865

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=1.2e-39  Score=322.43  Aligned_cols=342  Identities=13%  Similarity=0.094  Sum_probs=257.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCC-CC-Cccc-CCceEEEecCC
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGA-DN-SVLK-EQRVATVQGLS  110 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~-~~-~~~~-~~~i~~~~t~g  110 (410)
                      .+|+|+.|.+    +.+  ++.+.+++.+.+..   ..|. +..|.+++|+++++++... .+ ..++ +++|++  |+|
T Consensus       104 ~~i~l~~g~~----~~~--~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~--t~G  172 (533)
T 3f6t_A          104 DAVNYCHTEL----GLN--RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFP--TEG  172 (533)
T ss_dssp             HHHHHHHHTT----CCC--HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEE--EEH
T ss_pred             hheeccCCCC----CcC--CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEE--ECC
Confidence            3689999987    433  45565555555433   2344 7889999999999998544 23 3343 468999  999


Q ss_pred             hhhHHHHHHHHHH---HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec--CCCcccChhhHHHHHhcCCCCcEEEE
Q 015283          111 GTGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD--PKTVGLDFEGMIADIKAAPGGSFILL  185 (410)
Q Consensus       111 gt~a~~~~~~~~~---~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~i~~~~~~~~~ii  185 (410)
                      +++++..++..+.   .+.+||+|++++|+|.++...++..|.+++.+++..  ++++.+|++.+++.+.+   ++++++
T Consensus       173 ~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~---~~k~v~  249 (533)
T 3f6t_A          173 GTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP---SIKALI  249 (533)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT---TEEEEE
T ss_pred             HHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC---CCeEEE
Confidence            9999999854321   356999999999999999999999999988888754  56788999999998864   677778


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHH-HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~-~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      +++|+||||.+++.+++++|+++|+ +||+++|+||+|.++.++.  .   ++...  ..+++++++||||.+|++|+|+
T Consensus       250 l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~--~---~~~~~--~~~~~i~~~S~SK~~g~~G~Ri  322 (533)
T 3f6t_A          250 VVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF--K---SIYSV--VPYNTMLVYSYSKLFGCTGWRL  322 (533)
T ss_dssp             EESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC--C---CHHHH--SGGGEEEEEESHHHHTCGGGCE
T ss_pred             EeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc--c---CHhhc--CCCCEEEEecCcccCCCcccce
Confidence            7899999999999999999999999 6899999999999887531  1   11121  2358999999999999999999


Q ss_pred             ceEEEEeCCchhHHHHHHHH--------------------------------HhhccCcccCCChhHHHH----HHHHhC
Q 015283          265 GAMNVVCSSSDLAARVKSQL--------------------------------KRLARPMYSNPPVHGARI----VANVVG  308 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~----a~~~l~  308 (410)
                      ||++  ++++++++++...+                                .......+.+++...|.+    +...|.
T Consensus       323 G~l~--~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~  400 (533)
T 3f6t_A          323 GVIA--LNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLL  400 (533)
T ss_dssp             EEEE--EESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHT
T ss_pred             EEEE--ECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHh
Confidence            9984  44554444443321                                223333344666666666    334453


Q ss_pred             C----hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC--------------------
Q 015283          309 N----PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--------------------  364 (410)
Q Consensus       309 ~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--------------------  364 (410)
                      +    ..    +.+++++.++.++++++++.+.|.  ++    +.+..+.+++|+|+++.                    
T Consensus       401 ~~~g~~~----~~~~~~~~~~~~~~r~~~l~~~L~--~~----~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~  470 (533)
T 3f6t_A          401 TSTNGGS----DDPYIDIARKLVSERYDQLHDAMQ--AP----KDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFE  470 (533)
T ss_dssp             TCBGGGT----BCHHHHHHHHHHHHHHHHHHHHHT--CC----CCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCC
T ss_pred             hhccccc----hHHHHHHHHHHHHHHHHHHHHhcC--CC----ccccCCCceEEEEEehHhhhhhccchHHHHHhhccCC
Confidence            1    11    245668889999999999999885  44    46677889999987542                    


Q ss_pred             -HHHHHHhhhcCcEEEcCC-------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          365 -KAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       365 -~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       .+++.++++++||.+.||       +  |||++.++++++++++++|+++++++
T Consensus       471 ~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~  525 (533)
T 3f6t_A          471 QVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEY  525 (533)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHH
Confidence             255678887789999986       2  99998779999999999999998653

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=3.3e-38  Score=301.40  Aligned_cols=343  Identities=16%  Similarity=0.081  Sum_probs=256.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHH-HHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAA-FNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~-lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +++|+|+.|.+    ..+ .++.+.+++.+.+.... ..|++.  ..+ +|+++++++...++..+++++|++  ++|++
T Consensus        28 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~--t~g~~   97 (390)
T 1d2f_A           28 ADLLPFTISDM----DFA-TAPCIIEALNQRLMHGV-FGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVY--GPSVI   97 (390)
T ss_dssp             --CEECCSSSC----SSC-CCHHHHHHHHHHHTTCC-CCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEE--ESCHH
T ss_pred             CCeeEeeecCC----CCC-CCHHHHHHHHHHHhCCC-CCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEE--cCCHH
Confidence            36899999886    333 37899999988875433 668654  678 999999998766676667889999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      +++.++..  ..+.+||+|+++.|+|.++...++..|.+++.+|+.+++ ++.+|++.+++.+++  .+++++++++|+|
T Consensus        98 ~al~~~~~--~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~l~~p~n  173 (390)
T 1d2f_A           98 YMVSELIR--QWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK--PECKIMLLCSPQN  173 (390)
T ss_dssp             HHHHHHHH--HSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS--TTEEEEEEESSCT
T ss_pred             HHHHHHHH--HhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc--CCCeEEEEeCCCC
Confidence            99999843  335699999999999999999999999999999885442 467899999999874  2566777789999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++.+++++|+++|++||+++|+||+|.++.+.+.  ...++..+.... ... +.|+||.+|++|+|+||++  +
T Consensus       174 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~-~d~-~~s~sK~~~~~G~r~G~~~--~  247 (390)
T 1d2f_A          174 PTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ--PHIPWSNVARGD-WAL-LTSGSKSFNIPALTGAYGI--I  247 (390)
T ss_dssp             TTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSS--CCCCGGGTCCSS-EEE-EECSHHHHTCGGGCCEEEE--E
T ss_pred             CCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcCHHHcchhh-Hhh-ccCccHhhcccChhheEEE--E
Confidence            999999999999999999999999999999999876421  111221111111 133 9999999999999999984  4


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSF  350 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~  350 (410)
                      +++++++.+......  ...+.+++..++.++...+++.      .+.+++.+++++++++++.+.|+ + ++.   +.+
T Consensus       248 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~~---~~~  315 (390)
T 1d2f_A          248 ENSSSRDAYLSALKG--RDGLSSPSVLALTAHIAAYQQG------APWLDALRIYLKDNLTYIADKMN-AAFPE---LNW  315 (390)
T ss_dssp             CSHHHHHHHHHHHHT--TSCCCSCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCSS---CCC
T ss_pred             CCHHHHHHHHHHHhh--hcccCCCCHHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---CEE
Confidence            456755555442210  1123356677766666555532      23356788899999999999998 7 431   466


Q ss_pred             ccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          351 ILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       351 ~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..+.++++.|+.+     +. ++...+++++||.+.|+        +  ||+++. +++++++++++|++++++.
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~~  389 (390)
T 1d2f_A          316 QIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAV  389 (390)
T ss_dssp             CCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence            6777888877643     33 34566664679999875        2  999987 7899999999999998764

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=2.6e-38  Score=305.41  Aligned_cols=347  Identities=14%  Similarity=0.069  Sum_probs=253.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHH--HhhccC-CCccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAEN--LMLERG-ENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      +..|||+.|.| +....| .++.+.+++.  +.+..+ ....| .+..|.+++|+++++++.      +++++|++  |+
T Consensus        25 ~~~i~l~~g~p-~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~------~~~~~i~~--t~   94 (423)
T 3ez1_A           25 GLNLNMQRGQP-ADADFD-LSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLD------VKAENVLV--WN   94 (423)
T ss_dssp             TCCEESCCCCC-CHHHHH-TTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTT------SCGGGEEE--CS
T ss_pred             CceEecCCCCC-ChHhCC-CcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhC------CChhhEEE--eC
Confidence            46899999998 111122 3567877764  444321 23679 888999999999999973      33789999  99


Q ss_pred             ChhhHHH--HHHHHHHHhC--C---------CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283          110 SGTGSLR--LAAALIERYF--P---------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA  176 (410)
Q Consensus       110 ggt~a~~--~~~~~~~~~~--~---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~  176 (410)
                      |+++++.  ++..  ..+.  +         ||+|++++|+|..+...++..|.+++.+++.++   ++|++.+++.+++
T Consensus        95 G~~~al~~~~~~~--~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~  169 (423)
T 3ez1_A           95 NSSLELQGLVLTF--ALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGT  169 (423)
T ss_dssp             SCHHHHHHHHHHH--HHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHS
T ss_pred             CcHHHHHHHHHHH--HHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhh
Confidence            9999997  6533  3355  6         699999999999999999999999999998532   4999999999963


Q ss_pred             CCCCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHH-HHcCCcccccccCCCCCCCC-CCC---chhHhHHHhhcCCcEEEE
Q 015283          177 APGGSFIL-LHGCAHNPTGIDPTPEQWEKIADVI-QEKNHIPFFDVAYQGFASGS-LDN---DASSVRLFATRGMELLVA  250 (410)
Q Consensus       177 ~~~~~~~i-i~~~p~NPtG~~~~~~~l~~i~~~~-~~~~~~li~Deay~~~~~~~-~~~---~~~~~~~~~~~~~~~i~~  250 (410)
                      . ++++++ ++++||||||.+++.+++++|+++| ++||++||+||+|..+.+.+ ...   +...+....+..++++++
T Consensus       170 ~-~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  248 (423)
T 3ez1_A          170 D-PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVF  248 (423)
T ss_dssp             C-TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEE
T ss_pred             C-CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEE
Confidence            1 355555 4678999999999999999999999 99999999999999655432 111   122211112355789999


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC--hhhHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN--PALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~~  328 (410)
                      +||||. +++|+|+||+++   ++++++.+.....    ....+++.+.|.++..+|.+  ..+    .+++++.++.++
T Consensus       249 ~S~sK~-~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~----~~~~~~~~~~~~  316 (423)
T 3ez1_A          249 ASTSKI-TFAGAGLGFVAS---SEDNIRWLSKYLG----AQSIGPNKVEQARHVKFLTEYPGGL----EGLMRDHAAIIA  316 (423)
T ss_dssp             EESTTT-SCSSSSCEEEEE---CHHHHHHHHHHHH----HSCSCCCHHHHHHHHHHHHHSTTHH----HHHHHHHHHHHH
T ss_pred             eCchhh-ccCCcceEEEEe---CHHHHHHHHHHHh----hhccCCCHHHHHHHHHHHHhccchH----HHHHHHHHHHHH
Confidence            999999 578999999865   7786666554332    23446778888888777775  333    445566777777


Q ss_pred             HHHHHHHHHhhhccCCCC-CcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcC-C-----------C--eEEecCC
Q 015283          329 NVRQKLFDSLSAKDKSGK-DWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTK-D-----------G--RISLAGL  390 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~-~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~-~-----------g--Ris~~~~  390 (410)
                      ++++.+.+.|.+.++..+ .+.+..+.+++|+|+.+   +.+.+.++++++||.+.| |           +  ||+++..
T Consensus       317 ~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~  396 (423)
T 3ez1_A          317 PKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP  396 (423)
T ss_dssp             HHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS
T ss_pred             HHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC
Confidence            777766666651122101 14556778899998855   455666666678999998 2           1  9999766


Q ss_pred             CcccHHHHHHHHHHHhhh
Q 015283          391 SLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++++|++++++
T Consensus       397 ~~~~i~~~~~~l~~~l~~  414 (423)
T 3ez1_A          397 PVEEVRTAMQVVAACIRL  414 (423)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            899999999999999865

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=1.1e-38  Score=307.29  Aligned_cols=361  Identities=16%  Similarity=0.095  Sum_probs=248.2

Q ss_pred             CCCCcccchhHh-hhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC----CCccCcCCcccHHHHHHHHHHhc
Q 015283           17 PPDPILGVSEAF-KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLF   91 (410)
Q Consensus        17 ~~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~aia~~~~   91 (410)
                      .++.+......+ +...++++|+|+.|.| +.  .+.+.+.+.+++.+.+...    ....|.+..|.+++|+++++++.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~   89 (417)
T 3g7q_A           13 RHSGITRLMEDLNDGLRTPGAIMLGGGNP-AH--IPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLR   89 (417)
T ss_dssp             ---CHHHHHHHHHC-----CCEECSCCCC-CC--CHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHhhccCCCceEecCcCC-CC--CChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHH
Confidence            445554444443 3345578999999987 11  2222367777777665332    11479889999999999999997


Q ss_pred             CCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC-----EEEEc-CCCCcchhhhhhhC----CCCccceeeecC-
Q 015283           92 GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA-----KVLIS-SPTWGNHKNIFNDA----RVPWSEYRYYDP-  160 (410)
Q Consensus        92 ~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd-----~Vl~~-~p~y~~~~~~~~~~----g~~~~~v~~~~~-  160 (410)
                      +.++..+++++|++  |+|+++++++++..+  +.+||     +|+++ +|+|..+...+...    +..+...++... 
T Consensus        90 ~~~g~~~~~~~i~~--t~G~t~al~~~~~~l--~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (417)
T 3g7q_A           90 ETLGWDIEPQNIAL--TNGSQSAFFYLFNLF--AGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ  165 (417)
T ss_dssp             HHHCCCCCGGGEEE--ESCHHHHHHHHHHHH--SBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE
T ss_pred             HHhCCCCCcccEEE--eCCcHHHHHHHHHHH--cCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc
Confidence            77777788999999  999999999985433  66887     89997 99999987665322    222222232111 


Q ss_pred             CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          161 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       161 ~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                      .++.+|++.++  +.   ++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+... ....  ..  .
T Consensus       166 ~~~~~d~~~l~--~~---~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~-~~~~--~~--~  235 (417)
T 3g7q_A          166 FKYHVDFEHLH--IG---EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG-IIFS--EA--R  235 (417)
T ss_dssp             EEEECCGGGCC--CC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC-CBCS--CC--C
T ss_pred             cccccCHHHhc--cc---cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc-cccc--cc--c
Confidence            24678988887  43   36888888999999999999999999999999999999999999764321 1000  00  0


Q ss_pred             hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM  320 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  320 (410)
                      ....++++++.|+|| ++++|+|+||++.   ++++++++.....    ....+++.+++.++..++++.++    .++.
T Consensus       236 ~~~~~~~i~~~s~sK-~~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~----~~~~  303 (417)
T 3g7q_A          236 PLWNPNIILCMSLSK-LGLPGSRCGIIIA---NDKTITAIANMNG----IISLAPGGMGPAMMCEMIKRNDL----LRLS  303 (417)
T ss_dssp             CCCCTTEEEEEESGG-GTCTTSCCEEEEC---CHHHHHHHHHHHH----HHCCCCCSHHHHHHHHHHHTTCH----HHHH
T ss_pred             cCCCCCEEEEEechh-ccCCCcceEEEEe---CHHHHHHHHHhhc----ceeeCCCcHHHHHHHHHHcCcch----HHHH
Confidence            123468999999999 6889999999744   7886666554322    22345677788888888887654    3333


Q ss_pred             HH-HHHHHHHHHHHHHHHhhhc-cCCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-----------
Q 015283          321 EM-MAGRIKNVRQKLFDSLSAK-DKSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-----------  382 (410)
Q Consensus       321 ~~-~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-----------  382 (410)
                      .+ .++.++++++.+.+.|. + ++. ..+.+..+.+++|+|+.+     +.+.+.+.+.++||.+.||           
T Consensus       304 ~~~~~~~~~~~~~~~~~~l~-~~l~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~  381 (417)
T 3g7q_A          304 ETVIKPFYYQRVQQTIAIIR-RYLSE-ERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPW  381 (417)
T ss_dssp             HHTHHHHHHHHHHHHHHHHH-HHCCT-TTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHH-Hhccc-CCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCcccc
Confidence            34 67778888888888776 5 321 014566788899998743     4444433345579999763           


Q ss_pred             ----C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          383 ----G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 ----g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                          +  |||++. +++++++++++|+++++++
T Consensus       382 ~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~  413 (417)
T 3g7q_A          382 PHTHQCMRMNYVP-EPDKIEAGVKILAEEIERA  413 (417)
T ss_dssp             GGGGGEEEEESCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCeEEEEecC-CHHHHHHHHHHHHHHHHHH
Confidence                2  999987 9999999999999998753

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=1.3e-37  Score=294.45  Aligned_cols=320  Identities=13%  Similarity=0.115  Sum_probs=248.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +++|+|+.|++    ..+ +++.+.+++.+.+..  ...| |..+..++|+++++++..      ++++|++  ++||++
T Consensus        32 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~~~------~~~~v~~--~~g~t~   95 (363)
T 3ffh_A           32 TKITKLSSNEN----PLG-TSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFYQL------EEEELIF--TAGVDE   95 (363)
T ss_dssp             SCCEECSSCSC----TTC-CCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHHTC------CGGGEEE--ESSHHH
T ss_pred             CceEEccCCCC----CCC-CCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHhCC------ChhhEEE--eCCHHH
Confidence            57899999986    333 379999999887643  3556 567899999999999742      3689999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.++...  .+.+||+|++++|+|..+...++..|.+++.+++.  .++.+|++++++.+++   +++++++++|+|||
T Consensus        96 a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~p~npt  168 (363)
T 3ffh_A           96 LIELLTRV--LLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL--QDGEHDLEGMLNAIDE---KTTIVWICNPNNPT  168 (363)
T ss_dssp             HHHHHHHH--HCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC--TTSCCCHHHHHHHCCT---TEEEEEEESSCTTT
T ss_pred             HHHHHHHH--HccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--CCCCcCHHHHHHhccc---CCCEEEEeCCCCCc
Confidence            99998443  36799999999999999999999999999999884  3678999999999875   67888889999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++.++++.|++ |+++|+||+|.++.++ .   ..+........++++++.|+||.+|++|+|+||+++   +
T Consensus       169 G~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~~-~---~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~---~  240 (363)
T 3ffh_A          169 GNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVTP-Q---PEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA---D  240 (363)
T ss_dssp             CCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCSS-C---CCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE---C
T ss_pred             CCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcCc-c---ccCHHHHhhcCCCEEEEeechhhhcCchhceeeeec---C
Confidence            999999999999988887 9999999999987752 1   112223334567899999999999999999999865   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCccccc
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSFIL  352 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~~  352 (410)
                      +++++++..    ...  ..+++.+++.++...|++.       +++++.+++++++++++.+.|+ + .+    +.+.+
T Consensus       241 ~~~~~~l~~----~~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~-~~~g----~~~~~  302 (363)
T 3ffh_A          241 KEIIRQLNI----VRP--PFNTTSIGQKLAIEAIKDQ-------AFIGECRTSNANGIKQYEAFAK-RFEK----VKLYP  302 (363)
T ss_dssp             HHHHHHHHH----TCC--SCCCBHHHHHHHHHHHHCH-------HHHHHHHHHHHHHHHHHHHHHH-HCTT----CEECC
T ss_pred             HHHHHHHHH----hCC--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHh-hCCC----ceECC
Confidence            885555433    322  2357777777777777654       2356788899999999999998 7 55    45554


Q ss_pred             CCcceeeecCC--CHH-HHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHh
Q 015283          353 RQIGMFSFTGL--NKA-QSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       353 ~~~~~~~~~~~--~~~-~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l  406 (410)
                      + .+.|+|+.+  +.+ +.+.+.+ +||.+.+|.        ||+++  +++++++++++|++++
T Consensus       303 ~-~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l  363 (363)
T 3ffh_A          303 A-NGNFVLIDLGIEAGTIFSYLEK-NGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKLL  363 (363)
T ss_dssp             C-CSSEEEEECSSCHHHHHHHHHH-TTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred             C-CCeEEEEECCCCHHHHHHHHHH-CCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHhC
Confidence            4 456777765  344 4555554 699998862        99985  7899999999998864

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=3.7e-38  Score=299.47  Aligned_cols=309  Identities=17%  Similarity=0.139  Sum_probs=242.6

Q ss_pred             HhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh
Q 015283           63 LMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK  142 (410)
Q Consensus        63 ~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~  142 (410)
                      +.+.... ..|.+..|.+++|+++++++..     ++++++++  ++||++++.++..  ..+.+||+|++++|+|.++.
T Consensus        50 ~~~~~~~-~~y~~~~g~~~l~~~la~~~~~-----~~~~~v~~--~~g~~~a~~~~~~--~l~~~gd~Vl~~~~~~~~~~  119 (375)
T 3op7_A           50 KKLQGTK-LNYGWIEGSPAFKKSVSQLYTG-----VKPEQILQ--TNGATGANLLVLY--SLIEPGDHVISLYPTYQQLY  119 (375)
T ss_dssp             HHHHTSC-CSSCCTTCCHHHHHHHHTTSSS-----CCGGGEEE--ESHHHHHHHHHHH--HHCCTTCEEEEEESSCTHHH
T ss_pred             HHHhcCC-cCCCCCCChHHHHHHHHHHhcc-----CChhhEEE--cCChHHHHHHHHH--HhcCCCCEEEEeCCCchhHH
Confidence            3333343 7788899999999999999642     23689999  9999999999843  34779999999999999999


Q ss_pred             hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC
Q 015283          143 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY  222 (410)
Q Consensus       143 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay  222 (410)
                      ..++..|++++.+++.+++++.+|++.+++.+++   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|
T Consensus       120 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~  196 (375)
T 3op7_A          120 DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP---TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVY  196 (375)
T ss_dssp             HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT---TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred             HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc---CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence            9999999999999986566788999999999874   5667777899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH
Q 015283          223 QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI  302 (410)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (410)
                      .++...+    ..   ...+..+++++++|+||.+|++|+|+||+++   ++++++.    +.........+++.+.+.+
T Consensus       197 ~~~~~~~----~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~---~~~l~~~----~~~~~~~~~~~~~~~~~~~  262 (375)
T 3op7_A          197 RSFSELD----VP---SIIEVYDKGIAVNSLSKTYSLPGIRIGWVAA---NHQVTDI----LRDYRDYTMICAGVFDDLV  262 (375)
T ss_dssp             CCCSSSC----CC---CHHHHCTTEEEEEESSSSSSCGGGCCEEEEC---CHHHHHH----HTTTGGGTTSCCCHHHHHH
T ss_pred             ccccccC----CC---chhhhcCCEEEEeEChhhcCCcccceEEEEe---CHHHHHH----HHHHHhhhccCCCcHHHHH
Confidence            9988541    11   1223456889999999999999999999743   7785554    4433333334566677776


Q ss_pred             HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcE
Q 015283          303 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHV  377 (410)
Q Consensus       303 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi  377 (410)
                      +...++..      .+.+++.+++++++++.+.+.|+ +.+.   +.+..+.++++.|+.+    + .+++.++++++||
T Consensus       263 ~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi  332 (375)
T 3op7_A          263 AQLALAHY------QEILERNRHILEENLAILDQWIE-EEPL---VSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGV  332 (375)
T ss_dssp             HHHHHHTH------HHHHHHHHHHHHHHHHHHHHHHH-HCTT---EEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCE
T ss_pred             HHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHh-hCCC---ceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCE
Confidence            66666532      34467888888999999999998 7531   4566677777766532    3 4557777777899


Q ss_pred             EEcCCC--------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          378 YMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       378 ~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+.|+.        ||+++. +.+++++++++|+++++++
T Consensus       333 ~v~~g~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~~~  371 (375)
T 3op7_A          333 LLVPGNRFERDGYVRLGFAC-EQETLIKGLEKLSQFLRRF  371 (375)
T ss_dssp             ECEEGGGGTCTTEEEECCCS-CHHHHHHHHHHHHHHHGGG
T ss_pred             EEeChhhhCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHH
Confidence            998862        999887 6689999999999998764

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=2e-37  Score=293.54  Aligned_cols=327  Identities=17%  Similarity=0.144  Sum_probs=252.2

Q ss_pred             cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           31 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        31 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+.+|+|+.|.+    ..+ .++.+.+++.+.+.......|++ .+..++|+++++++...     ++++|++  |+|
T Consensus        27 ~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~~-----~~~~i~~--~~g   93 (367)
T 3euc_A           27 PDSHGLVKLDAMEN----PYR-LPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQVP-----AGMEVLL--GNG   93 (367)
T ss_dssp             CCCTTCEECCSSCC----CCC-CCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTCC-----TTCEEEE--EEH
T ss_pred             CCCCCeeEccCCCC----CCC-CCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCCC-----CcceEEE--cCC
Confidence            33457899999986    333 37899999888775322367854 68899999999997431     3678999  999


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      |++++.++..  ..+.+||+|+++.|+|..+...++..|.+++.+++.  .++.+|++.+++.+++.  +++++++++|+
T Consensus        94 ~t~a~~~~~~--~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~  167 (367)
T 3euc_A           94 SDEIISMLAL--AAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLR--ADFTLDRGAMLAAMAEH--QPAIVYLAYPN  167 (367)
T ss_dssp             HHHHHHHHHH--HTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECC--TTSCCCHHHHHHHHHHH--CCSEEEEESSC
T ss_pred             HHHHHHHHHH--HHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHHHhhcc--CCCEEEEcCCC
Confidence            9999999843  336799999999999999999999999999999883  46789999999998752  45566668999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      ||||.+++.+++++|+++|++|  |+++|+||+|.++....   ..    ......++++++.|+||. +++|+|+||++
T Consensus       168 nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~---~~----~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~  239 (367)
T 3euc_A          168 NPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES---WM----SRLTDFGNLLVMRTVSKL-GLAGIRLGYVA  239 (367)
T ss_dssp             TTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC---SG----GGGGTCTTEEEEEECCCT-TSCSCCEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc---hH----HHHhhCCCEEEEecchhh-cccccCceeee
Confidence            9999999999999999999999  99999999999877431   11    123445689999999999 89999999985


Q ss_pred             EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                      +   +++++++    +.....  ..+++.+++.++...|++.       +++++.+++++++++++.+.|+ +++.   +
T Consensus       240 ~---~~~~~~~----~~~~~~--~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~-~~~g---~  299 (367)
T 3euc_A          240 G---DPQWLEQ----LDKVRP--PYNVNVLTEATALFALEHV-------AVLDEQAAQLRAERSRVAEGMA-AHGG---V  299 (367)
T ss_dssp             E---CHHHHHH----HGGGCC--SSCCCHHHHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHHHHH-TSTT---C
T ss_pred             e---CHHHHHH----HHHhCC--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHH-hCCC---c
Confidence            5   7774444    443332  2356777888888888763       2346788889999999999998 7721   4


Q ss_pred             ccccCCcceeeecCC-CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          349 SFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       349 ~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      .. .+..+.|+|+.+ +.+.+.+.+.++||.+.+++          ||+++  +++++++++++|+++++
T Consensus       300 ~~-~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~  366 (367)
T 3euc_A          300 TV-FPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASLQ  366 (367)
T ss_dssp             EE-CCCSSSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred             EE-CCCCCeEEEEECCCHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHhc
Confidence            53 345577888766 44444444456799998752          99985  78999999999999875

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=9.3e-38  Score=303.44  Aligned_cols=367  Identities=14%  Similarity=0.080  Sum_probs=259.3

Q ss_pred             CCCCCcccchhHhh-hcCCCCee-eeeeeeeecCCCcccccHHHHHHHHHhhcc-------C----CCccCcCCcccHHH
Q 015283           16 APPDPILGVSEAFK-ADTDEKKL-NLGVGAYRTEELQPYVLDVVKKAENLMLER-------G----ENKEYLPIEGLAAF   82 (410)
Q Consensus        16 ~~~~~~~~~~~~~~-~~~~~~~i-~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-------~----~~~~y~~~~g~~~l   82 (410)
                      .+++++..+...+. ...++++| +|+.|.| +.  .+.+.+.+.+++.+....       .    +...|.+..|.+++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~p-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l   88 (444)
T 3if2_A           12 TQPTGISQLMDDLGDALKSDQPVNMLGGGNP-AK--IDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAF   88 (444)
T ss_dssp             HSCCHHHHHHHHHHHHHHSSSCCEECSCCCC-CC--CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHH
T ss_pred             cCchhHHHHHHHHHhhhcCchhhhccCCCCC-Cc--ccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHH
Confidence            45555655444333 23447899 9999987 11  222235666776666543       2    12569888999999


Q ss_pred             HHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC--------------EEEEc-CCCCcchhhh---
Q 015283           83 NKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA--------------KVLIS-SPTWGNHKNI---  144 (410)
Q Consensus        83 r~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd--------------~Vl~~-~p~y~~~~~~---  144 (410)
                      |+++++++...++..+++++|++  |+||++++.+++.  ..+.+||              +|+++ +|+|..|...   
T Consensus        89 r~~ia~~l~~~~g~~~~~~~i~~--t~G~t~al~~~~~--~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~  164 (444)
T 3if2_A           89 IDALVGFFNRHYDWNLTSENIAL--TNGSQNAFFYLFN--LFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE  164 (444)
T ss_dssp             HHHHHHHHHHHHCCCCCGGGEEE--ESSHHHHHHHHHH--HSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred             HHHHHHHHHhhcCCCCCHHHEEE--ecCcHHHHHHHHH--HHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence            99999999877777788999999  9999999999843  3356887              78886 8999999873   


Q ss_pred             ---hhhCCCCccceeeecCC---CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283          145 ---FNDARVPWSEYRYYDPK---TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF  218 (410)
Q Consensus       145 ---~~~~g~~~~~v~~~~~~---~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~  218 (410)
                         +...|.+++.++..+++   ++.+|++.+++.+....++++++++++|+||||.+++.+++++|+++|++||+++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~  244 (444)
T 3if2_A          165 GQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLII  244 (444)
T ss_dssp             SCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred             cchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEE
Confidence               44567777777763211   357899999987422123678888899999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChh
Q 015283          219 DVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVH  298 (410)
Q Consensus       219 Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (410)
                      ||+|..+... ....  ..  .....+++++++|+||. +++|+|+||++.   ++++++.+.....    ....+++.+
T Consensus       245 De~~~~~~~~-~~~~--~~--~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~---~~~l~~~~~~~~~----~~~~~~~~~  311 (444)
T 3if2_A          245 DNAYGMPFPN-IIYS--DA--HLNWDNNTILCFSLSKI-GLPGMRTGIIVA---DAKVIEAVSAMNA----VVNLAPTRF  311 (444)
T ss_dssp             ECTTCTTTTC-CBCS--CC--CCCCCTTEEEEEESTTT-TCGGGCCEEEEC---CHHHHHHHHHHHH----HHHSSCCCH
T ss_pred             ECCCCCcccc-cccc--cc--cccCCCCEEEEechhhc-cCCCCceEEEEE---CHHHHHHHHHHHH----hccCCCChH
Confidence            9999754321 1000  00  01234689999999997 789999999744   7786666554332    223356677


Q ss_pred             HHHHHHHHhCChhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhc-cCCCCCcccccCCcceeeecC-----CCHHHHHHh
Q 015283          299 GARIVANVVGNPALFDEWKAEMEM-MAGRIKNVRQKLFDSLSAK-DKSGKDWSFILRQIGMFSFTG-----LNKAQSDNM  371 (410)
Q Consensus       299 ~~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l  371 (410)
                      ++.++..++.+..+.    ++..+ .++.++++++.+.+.|. + ++. ..+.+..+.+++|+|+.     .+.+.+.+.
T Consensus       312 ~~~a~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~-~~l~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~  385 (444)
T 3if2_A          312 GAAIATPLVANDRIK----QLSDNEIKPFYQKQATLAVKLLK-QALGD-YPLMIHKPEGAIFLWLWFKDLPISTLDLYER  385 (444)
T ss_dssp             HHHHHHHHHHTSHHH----HHHHHTHHHHHHHHHHHHHHHHH-HHSSS-SSEEEECCCBSSEEEEEETTCSSCHHHHHHH
T ss_pred             HHHHHHHHHHcCchh----HHHHHHHHHHHHHHHHHHHHHHH-Hhccc-CCceEecCCccEEEEEEcCCCCCCHHHHHHH
Confidence            788888888776543    33333 66677777777777776 4 221 01455667888998873     344444434


Q ss_pred             hhcCcEEEcCC----------------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          372 TNKWHVYMTKD----------------G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       372 l~~~gi~v~~~----------------g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.++||.+.||                +  ||+++. +++++++++++|+++++++
T Consensus       386 l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~  440 (444)
T 3if2_A          386 LKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVREL  440 (444)
T ss_dssp             HHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHH
Confidence            45579998763                2  999988 9999999999999998653

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1.8e-38  Score=314.24  Aligned_cols=338  Identities=11%  Similarity=0.050  Sum_probs=245.4

Q ss_pred             eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc-CCCCC---cccCCceEEEecCCh
Q 015283           36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF-GADNS---VLKEQRVATVQGLSG  111 (410)
Q Consensus        36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~-~~~~~---~~~~~~i~~~~t~gg  111 (410)
                      +|+|+.|.+    +.+  ++.+.+++.+....   ..|++..|..++|+++++++. ..++.   ..++++|++  |+|+
T Consensus       106 ~i~l~~g~~----~~~--~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~--t~G~  174 (546)
T 2zy4_A          106 SLSYVRDQL----GLD--PAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFA--VEGG  174 (546)
T ss_dssp             HHHHHHHTS----CCC--HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEE--EEHH
T ss_pred             hhecccCCC----CCC--ChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEE--ECCH
Confidence            789999987    443  46666666665532   679888899999999888764 32222   124688999  9999


Q ss_pred             hhHHHHHHHHHH---HhCCCCEEEEcCCCCcchhhhhh--hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEe
Q 015283          112 TGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFN--DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH  186 (410)
Q Consensus       112 t~a~~~~~~~~~---~~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~  186 (410)
                      ++++..+...+.   .+.+||+|++++|+|+.|...+.  ..|++++.+++.++.+|.+|++.+++.+..   +++++++
T Consensus       175 ~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~v~l  251 (546)
T 2zy4_A          175 TAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP---AIKIFFC  251 (546)
T ss_dssp             HHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST---TEEEEEE
T ss_pred             HHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC---CCeEEEE
Confidence            999999854431   25699999999999999988744  456788888876556688999999877643   6777777


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHH--HHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVI--QEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~--~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      ++||||||.+++.+++++|+++|  +++|++||+||+|.++.++.  .   ++...  ..+++++++||||.+|++|+|+
T Consensus       252 ~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~--~---s~~~~--~~~~~i~~~S~SK~~g~~GlRi  324 (546)
T 2zy4_A          252 VNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDF--Q---SLFAI--CPENTLLVYSFSKYFGATGWRL  324 (546)
T ss_dssp             ESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTC--C---CHHHH--CGGGEEEEEESTTTTTCGGGCE
T ss_pred             ECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccC--c---CHHHh--CCCCEEEEEeCccccCCCCcce
Confidence            89999999999999999999999  78999999999999887531  1   22121  1258999999999999999999


Q ss_pred             ceEEEEeCCchhHHHHHHHH--------Hh-hc-----------------------cCcccCCChhHHHHH-----HHHh
Q 015283          265 GAMNVVCSSSDLAARVKSQL--------KR-LA-----------------------RPMYSNPPVHGARIV-----ANVV  307 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~--------~~-~~-----------------------~~~~~~~~~~~~~~a-----~~~l  307 (410)
                      ||+++  +++++++++...+        .. ..                       .....+.+...|.++     ..++
T Consensus       325 G~~~~--~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all  402 (546)
T 2zy4_A          325 GVVAA--HQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALM  402 (546)
T ss_dssp             EEEEE--ESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHH
T ss_pred             EEEEE--CCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHH
Confidence            99844  3434666653211        00 00                       011224555565542     2445


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---------------------HH
Q 015283          308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---------------------KA  366 (410)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~  366 (410)
                      ++.      ..+.++.++.++++++.+.+.|.  .+    +...++++++|+|+.+.                     .+
T Consensus       403 ~~~------~~~~~~~r~~~~~r~~~l~~~L~--~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~  470 (546)
T 2zy4_A          403 DEA------DEYKHTLKQLIRRRETTLYRELG--MP----PLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGD  470 (546)
T ss_dssp             CTT------CHHHHHHHHHHHHHHHHHHGGGT--SS----CCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHH
T ss_pred             hcc------HHHHHHHHHHHHHHHHHHHHhcC--CC----cccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHH
Confidence            543      23356778889999988888775  22    34456788999887542                     23


Q ss_pred             HHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          367 QSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       367 ~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++.++++++||.+.||.         ||+++..+++++++++++|++++.+
T Consensus       471 ~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~  521 (546)
T 2zy4_A          471 MLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADE  521 (546)
T ss_dssp             HHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence            45667777899999962         9999876889999999999998764

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=4.3e-37  Score=290.02  Aligned_cols=313  Identities=16%  Similarity=0.182  Sum_probs=238.0

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      ++|+|+.|++  ..++   ++.+      .+. . ..+|++. +..++|+++++++..      ++++|++  ++|++++
T Consensus        30 ~~i~l~~~~~--~~~~---~~~v------a~~-~-~~~Y~~~-~~~~lr~~la~~~~~------~~~~v~~--~~G~~~a   87 (356)
T 1fg7_A           30 GDVWLNANEY--PTAV---EFQL------TQQ-T-LNRYPEC-QPKAVIENYAQYAGV------KPEQVLV--SRGADEG   87 (356)
T ss_dssp             CSEECSSCCC--SSCC---CCCC------CCC-C-TTSCCCS-SCHHHHHHHHHHHTS------CGGGEEE--ESHHHHH
T ss_pred             ceEEeeCCCC--CCCC---CHhH------hhh-h-hccCCCc-cHHHHHHHHHHHhCC------ChHHEEE--cCCHHHH
Confidence            5799999987  2232   3444      222 2 3678654 589999999999732      3688999  9999999


Q ss_pred             HHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          115 LRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       115 ~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      +..+...  .+.+| |+|++++|+|..|...++..|.+++.+++.  +++.+|++.+++.++    +++++++++|||||
T Consensus        88 i~~~~~~--~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~----~~~~v~l~~p~npt  159 (356)
T 1fg7_A           88 IELLIRA--FCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD----GVKVVYVCSPNNPT  159 (356)
T ss_dssp             HHHHHHH--HCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT----TEEEEEEESSCTTT
T ss_pred             HHHHHHH--HhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc----CCCEEEEeCCCCCC
Confidence            9998433  36799 999999999999999999999999988873  457789999987774    45677778999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++|+++|+ +|+++|+||+|.++...   .   ++..+.+..+++++++|+||.+|++|+|+||+++   +
T Consensus       160 G~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~---~---~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~---~  229 (356)
T 1fg7_A          160 GQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA---N  229 (356)
T ss_dssp             CCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG---G---CSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEE---C
T ss_pred             CCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC---C---cHHHHHhhCCCEEEEecchHhhcCchhhhEEEEe---C
Confidence            99999999999999999 99999999999987621   1   1112234456899999999999999999999865   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++.+..    ... .+ +++.+++.++...|++.++     +++++.+++++++++++.+.|+ +++.   +....+
T Consensus       230 ~~~~~~l~~----~~~-~~-~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~  294 (356)
T 1fg7_A          230 EEVINLLMK----VIA-PY-PLSTPVADIAAQALSPQGI-----VAMRERVAQIIAEREYLIAALK-EIPC---VEQVFD  294 (356)
T ss_dssp             HHHHHHHHH----HSC-SS-CSCHHHHHHHHHHTSHHHH-----HHHHHHHHHHHHHHHHHHHHHH-HSTT---EEEECC
T ss_pred             HHHHHHHHH----hcC-CC-CCCHHHHHHHHHHhcCccH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC---ceEECC
Confidence            786555543    222 23 5677888888888875432     1357788889999999999998 7751   222335


Q ss_pred             CcceeeecCC-CH-HHHHHhhhcCcEEEcC-C------C--eEEecCCCcccHHHHHHHHHHH
Q 015283          354 QIGMFSFTGL-NK-AQSDNMTNKWHVYMTK-D------G--RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       354 ~~~~~~~~~~-~~-~~~~~ll~~~gi~v~~-~------g--Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      ..++|+|+.+ +. ++.+++ .++||.+.+ +      +  ||+++  +++++++++++|+++
T Consensus       295 ~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~--~~~e~~~~~~~l~~~  354 (356)
T 1fg7_A          295 SETNYILARFKASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG--TREESQRVIDALRAE  354 (356)
T ss_dssp             CSSSEEEEEETTHHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHTC
T ss_pred             CCCeEEEEECCCHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence            5678888765 34 345566 557999998 4      2  99986  578999999998865

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=4.8e-40  Score=314.37  Aligned_cols=341  Identities=14%  Similarity=0.073  Sum_probs=258.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++++|+.|.+    +.++ ++.+.+++.+.+.... ..|++.  ..++|+++++++...++..+++++|++  ++||++
T Consensus        31 ~~~i~l~~~~~----~~~~-~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--~~g~~~  100 (392)
T 3b1d_A           31 PQLLPAWIADM----DFEV-MPEVKQAIHDYAEQLV-YGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVF--VEGVVP  100 (392)
Confidence            37899999987    3333 6888888888775433 667554  889999999998777776677889999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++.++...+  +.+||+|+++.|+|..+...++..|.+++.+++.+++ ++.+|++.+++.+.+  +++.++++++|+||
T Consensus       101 a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~np  176 (392)
T 3b1d_A          101 AISIAIQAF--TKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE--NDVKLYLLCNPHNP  176 (392)
Confidence            999984433  6699999999999999999999999999999874333 467899999998873  24566667999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEEEEe
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      ||.+++.+++++|+++|++||+++|+||+|.++.+.+.  ...++..+... .+++++++|+||.+|++|+|+||++  +
T Consensus       177 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~--~  252 (392)
T 3b1d_A          177 GGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGH--EHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAI--I  252 (392)
Confidence            99999999999999999999999999999999886421  11222222121 4688999999999999999999984  4


Q ss_pred             CCchhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCcc
Q 015283          272 SSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWS  349 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~  349 (410)
                      +++++++.+....    ... +.+++.+++.++...|++.      .+++++.++.++++++.+.+.|+ + ++.   +.
T Consensus       253 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~~---~~  318 (392)
T 3b1d_A          253 ENPTLCAQFKHQQ----LVNNHHEVSSLGYIATETAYRYG------KPWLVALKAVLEENIQFAVEYFA-QEAPR---LK  318 (392)
Confidence            4455555554422    222 2245666667666666642      23356788889999999999888 6 421   46


Q ss_pred             cccCCcceeeecCCC------HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          350 FILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       350 ~~~~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      +..+.++++.|+.+.      .++...+++++||.+.|+        +  ||+++. +++++++++++|+++++
T Consensus       319 ~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          319 VMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP  391 (392)
Confidence            677888888887552      234556665679999875        1  999887 78999999999998875

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=4.9e-36  Score=283.71  Aligned_cols=341  Identities=14%  Similarity=0.103  Sum_probs=249.5

Q ss_pred             CCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCC
Q 015283           16 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN   95 (410)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~   95 (410)
                      .++.++.++.+++..+ ..++|||+.|.+    ..+ .++.+.+++.+.+..  ...|+ ..|..++|+++++++..   
T Consensus         7 ~~g~~~~~~~~~~~~~-~~~~idl~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~~~---   74 (364)
T 1lc5_A            7 AHGGNIREPATVLGIS-PDQLLDFSANIN----PLG-MPVSVKRALIDNLDC--IERYP-DADYFHLHQALARHHQV---   74 (364)
T ss_dssp             SSSCCCHHHHHHHTSC-GGGSEECSSCCC----TTC-CCHHHHHHHHHTGGG--GGSCC-CTTCHHHHHHHHHHHTS---
T ss_pred             CCCccHHHHHHhcCCC-ccceEEeccccC----CCC-CCHHHHHHHHHHHHH--hhcCC-CCCHHHHHHHHHHHHCc---
Confidence            3445565555555432 246899999986    222 368899998887754  36684 45899999999999732   


Q ss_pred             CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh
Q 015283           96 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK  175 (410)
Q Consensus        96 ~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~  175 (410)
                         ++++|++  ++|+++++.++...   + +||+|+++.|+|..+...++..|.+++.+++.+++++.+ ++.+.+.+.
T Consensus        75 ---~~~~v~~--~~g~~~al~~~~~~---~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~  144 (364)
T 1lc5_A           75 ---PASWILA--GNGETESIFTVASG---L-KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALT  144 (364)
T ss_dssp             ---CGGGEEE--ESSHHHHHHHHHHH---H-CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCC
T ss_pred             ---CHHHEEE--CCCHHHHHHHHHHH---c-CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhcc
Confidence               3678999  99999999997433   3 789999999999999999999999999998843233333 465665553


Q ss_pred             cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283          176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK  255 (410)
Q Consensus       176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  255 (410)
                      .   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++  ....   ...+..++++++.|+||
T Consensus       145 ~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~---~~~~~~~~~i~~~s~sK  216 (364)
T 1lc5_A          145 P---DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE--TGFI---PALKDNPHIWVLRSLTK  216 (364)
T ss_dssp             T---TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTC--CCSG---GGCTTCTTEEEEEESTT
T ss_pred             C---CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCc--cchh---hHhccCCCEEEEEECch
Confidence            2   45666778999999999999999999999999999999999999887531  1111   22234568999999999


Q ss_pred             cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      .+|++|+|+||++  +.++++++++...    ..  ..+++.+++.++...|++.       +++++.+++++++++++.
T Consensus       217 ~~~~~G~r~G~~~--~~~~~~~~~l~~~----~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~  281 (364)
T 1lc5_A          217 FYAIPGLRLGYLV--NSDDAAMARMRRQ----QM--PWSVNALAALAGEVALQDS-------AWQQATWHWLREEGARFY  281 (364)
T ss_dssp             TTTCTTTCCEEEE--CCCHHHHHHHHHH----SC--TTCSCHHHHHHHHHGGGCH-------HHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCccceEEEE--ECCHHHHHHHHHh----CC--CCCCCHHHHHHHHHHHhCc-------HHHHHHHHHHHHHHHHHH
Confidence            9999999999984  2488866655432    22  2356777888888888763       235678888999999999


Q ss_pred             HHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHH
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAI  402 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l  402 (410)
                      +.|+ +++.   +.+.++ .+.|+|+.+.   .++.+.+.+ +||.+.|+        +  ||+++  +.++++++++.|
T Consensus       282 ~~L~-~~~~---~~~~~~-~g~~~~~~~~~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l  353 (364)
T 1lc5_A          282 QALC-QLPL---LTVYPG-RANYLLLRCEREDIDLQRRLLT-QRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAAL  353 (364)
T ss_dssp             HHHH-TSTT---EEECCC-SSSEEEEEESCTTCCHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHH
T ss_pred             HHHh-cCCC---CEECCC-CCeEEEEECCCcHHHHHHHHHH-CCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHH
Confidence            9998 7721   455444 4566666442   245666665 59999875        2  99975  578899999999


Q ss_pred             HHHhhhc
Q 015283          403 IDSYHNV  409 (410)
Q Consensus       403 ~~~l~~~  409 (410)
                      +++++.+
T Consensus       354 ~~~~~~~  360 (364)
T 1lc5_A          354 RNVLTGI  360 (364)
T ss_dssp             HHHC---
T ss_pred             HHHhhcc
Confidence            9887653

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.1e-36  Score=281.87  Aligned_cols=313  Identities=16%  Similarity=0.172  Sum_probs=235.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .+.|+|+.+.+    ..+ +++.+.+++.+....  ...| +..|..++|+++++++..      ++++|++  |+|+++
T Consensus        16 ~~~i~l~~n~~----~~~-~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~~~------~~~~i~~--t~G~~~   79 (337)
T 3p1t_A           16 AQAVCLAFNEN----PEA-VEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHFSC------PEDNLML--VRGIDE   79 (337)
T ss_dssp             CCCEECSSCCC----CSC-CCHHHHHHHHHHGGG--TTSC-CTTHHHHHHHHHHHHHTS------CGGGEEE--ESHHHH
T ss_pred             CCceEeeCCCC----CCC-CCHHHHHHHHHhhhh--hccC-CCCchHHHHHHHHHHhCc------CHHHEEE--eCCHHH
Confidence            46899998875    222 378999998887754  3678 567999999999999732      3679999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.++..   .+ +||+|++++|+|..+...++..|.+++.+++  ++++.+|++.+++.     .+++++++++|+|||
T Consensus        80 ~l~~~~~---~~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~-----~~~~~v~i~~p~npt  148 (337)
T 3p1t_A           80 CFDRISA---EF-SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL--TDDLLLDPNDLAQV-----SRDDCVVLANPSNPT  148 (337)
T ss_dssp             HHHHHHH---HS-TTSEEEEESSSCSHHHHHHTTSCCEEEEECB--CTTSSBCHHHHTTC-----CTTEEEEEESSCTTT
T ss_pred             HHHHHHH---hc-CCCeEEEeCCCcHHHHHHHHHcCCEEEEecC--CCCCCCCHHHHHhh-----cCCCEEEEeCCCCCC
Confidence            9998733   34 9999999999999999999999999999987  34678999988764     256788889999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++.+|   |+++++ +|+||+|.+|.....  .      .....+++++++|+||.+|++|+|+||+++   +
T Consensus       149 G~~~~~~~l~~l---~~~~~~-~ivDea~~~~~~~~~--~------~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~  213 (337)
T 3p1t_A          149 GQALSAGELDQL---RQRAGK-LLIDETYVDYSSFRA--R------GLAYGENELVFRSFSKSYGLAGLRLGALFG---P  213 (337)
T ss_dssp             CCCCCHHHHHHH---HHHCSE-EEEECTTGGGSSCSS--S------CCCCBTTEEEEEESSSTTCCTTTCCEEEEC---C
T ss_pred             CCCCCHHHHHHH---HHhCCc-EEEECCChhhccccc--c------ccccCCCEEEEeeCchhccCcchheEEEEe---C
Confidence            999999987777   566776 666999998775321  0      012335789999999999999999999754   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++.+    ....  ...+++..++.++..+|++.+.       +++.++++.++++++.+.|+ ++|    +.+.++
T Consensus       214 ~~~~~~l----~~~~--~~~~~~~~~~~a~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~  275 (337)
T 3p1t_A          214 SELIAAM----KRKQ--WFCNVGTLDLHALEAALDNDRA-------REAHIAKTLAQRRRVADALR-GLG----YRVASS  275 (337)
T ss_dssp             HHHHHHH----HTTS--CTTCSCHHHHHHHHHHHTCHHH-------HHHHHHHHHHHHHHHHHHHH-HTT----CCBCCC
T ss_pred             HHHHHHH----Hhhc--CCCCCCHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHHHHH-HCc----CEECCC
Confidence            7755544    3322  2235667777777778876432       23555666777888999998 876    456666


Q ss_pred             CcceeeecCCCHHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          354 QIGMFSFTGLNKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       354 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .++++.|...+.+.+.++++++||.+.+|.        |||++  ++++++++++.|++++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~  336 (337)
T 3p1t_A          276 EANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYSDH  336 (337)
T ss_dssp             SSSEEEEECTTTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHHTC-
T ss_pred             CCeEEEEEcCCHHHHHHHHHHCCeEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhhc
Confidence            666555444344455555666799998863        99985  689999999999988653

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=7.4e-36  Score=283.01  Aligned_cols=325  Identities=14%  Similarity=0.160  Sum_probs=243.6

Q ss_pred             eeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .|||+.|.+    ..+ .++.+.+++.+.+...  ....|++..+ .++|+++++++.+.+|..+++++|++  ++|+++
T Consensus        32 ~idl~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~--~~G~~~  103 (369)
T 3cq5_A           32 DIRLNTNEN----PYP-PSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWA--ANGSNE  103 (369)
T ss_dssp             SEECSSCCC----CSC-CCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEE--ESHHHH
T ss_pred             ceeccCCCC----CCC-CCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEE--CCChHH
Confidence            489999986    222 3688888887776431  1266865555 79999999998766565666789999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++..+...  .+.+||+|++++|+|..+...++..|.+++.++.  ++++.+|++.+++.+++.  +++++++++|+|||
T Consensus       104 al~~~~~~--l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~npt  177 (369)
T 3cq5_A          104 ILQQLLQA--FGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSR--GADFRIDMDVALEEIRAK--QPDIVFVTTPNNPT  177 (369)
T ss_dssp             HHHHHHHH--HCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEEC--CTTSSCCHHHHHHHHHHH--CCSEEEEESSCTTT
T ss_pred             HHHHHHHH--hcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecC--CcCCCCCHHHHHHHhhcc--CCCEEEEeCCCCCC
Confidence            99988433  3679999999999999999999999999999886  345789999999988741  34455569999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC-cEEEEecccccccccCCCcceEEEEeC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      |.+++.+++++|++   .+++++|+||+|.++..+   .   +...+.+..+ +++++.|+||.+|++|+|+||+++   
T Consensus       178 G~~~~~~~l~~l~~---~~~~~li~De~~~~~~~~---~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~---  245 (369)
T 3cq5_A          178 GDVTSLDDVERIIN---VAPGIVIVDEAYAEFSPS---P---SATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA---  245 (369)
T ss_dssp             CCCCCHHHHHHHHH---HCSSEEEEECTTGGGCCS---C---CGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEE---
T ss_pred             CCCCCHHHHHHHHH---hCCCEEEEECCchhhcCC---c---chHHHHhhCCCCEEEEEechHhcCCcccceEEEEe---
Confidence            99999888888755   455999999999988742   1   1112223445 889999999999999999999865   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++.    +..... .+ +++.+++.++...|++.       +++++.+++++++++++.+.|+ +.|    +.+.+
T Consensus       246 ~~~~~~~----l~~~~~-~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~  307 (369)
T 3cq5_A          246 NPAFIDA----VMLVRL-PY-HLSALSQAAAIVALRHS-------ADTLGTVEKLSVERVRVAARLE-ELG----YAVVP  307 (369)
T ss_dssp             CTHHHHH----HHTTSC-TT-CSCHHHHHHHHHHHHTH-------HHHHTHHHHHHHHHHHHHHHHH-HHT----CEEEC
T ss_pred             CHHHHHH----HHHcCC-CC-CCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHH-hCC----CEECC
Confidence            6675444    333322 22 46777777777777653       2346778889999999999998 776    35544


Q ss_pred             CCcceeeecCC--CHH-HHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          353 RQIGMFSFTGL--NKA-QSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       353 ~~~~~~~~~~~--~~~-~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                       ..+.|+|+.+  +.. +.+.+ .++||.+.+++     ||+++  +++++++++++|++++..
T Consensus       308 -~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~~~~~iRis~~--~~~~i~~~~~~l~~~~~~  367 (369)
T 3cq5_A          308 -SESNFVFFGDFSDQHAAWQAF-LDRGVLIRDVGIAGHLRTTIG--VPEENDAFLDAAAEIIKL  367 (369)
T ss_dssp             -CSSSEEEEECCSSHHHHHHHH-HHTTEECBCCSCTTEEEEECC--CHHHHHHHHHHHHHHHTT
T ss_pred             -CCCeEEEEECCCCHHHHHHHH-HHCCEEEEECCCCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence             4456777654  343 45555 45799999873     99986  689999999999998754

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=1.8e-35  Score=279.32  Aligned_cols=335  Identities=16%  Similarity=0.154  Sum_probs=243.4

Q ss_pred             CCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283           15 MAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD   94 (410)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~   94 (410)
                      ..+..++....+    ..++++|||+.|.+    ..+ +++.+.+++.+.+..  ...| +..+..++|+++++++..  
T Consensus        11 ~~~g~~~~~~~~----~~~~~~idl~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~~~--   76 (361)
T 3ftb_A           11 MIHGGDIYTEGV----FKGRELLDYSSNIN----PLG-IPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYLKL--   76 (361)
T ss_dssp             ---------------------CEETTCCCC----TTC-SCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHHTC--
T ss_pred             ccCCCCHHHHhh----cCCCCEEEecCCCC----CCC-CCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHhCC--
Confidence            444554544333    22457899999976    222 368899888887754  3567 567899999999999732  


Q ss_pred             CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283           95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI  174 (410)
Q Consensus        95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i  174 (410)
                          ++++|++  ++||++++.++..   .+   |+|+++.|+|..+...++..|.+++.+++.+  +..++++.+++.+
T Consensus        77 ----~~~~i~~--~~g~t~al~~~~~---~~---d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~l~~~l  142 (361)
T 3ftb_A           77 ----KDIGIVL--GNGASEIIELSIS---LF---EKILIIVPSYAEYEINAKKHGVSVVFSYLDE--NMCIDYEDIISKI  142 (361)
T ss_dssp             ----CSCEEEE--ESSHHHHHHHHHT---TC---SEEEEEESCCTHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHT
T ss_pred             ----CcceEEE--cCCHHHHHHHHHH---Hc---CcEEEecCChHHHHHHHHHcCCeEEEeecCc--ccCCCHHHHHHhc
Confidence                3689999  9999999999733   23   9999999999999999999999999998843  3456778999888


Q ss_pred             hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc
Q 015283          175 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS  254 (410)
Q Consensus       175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  254 (410)
                      ++    ++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ ...   +........+++++++|+|
T Consensus       143 ~~----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~---~~~~~~~~~~~~i~~~s~s  214 (361)
T 3ftb_A          143 DD----VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSS---SFVGEIKNYSCLFIIRAMT  214 (361)
T ss_dssp             TT----CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTS---SSGGGTTTCSSEEEEEESS
T ss_pred             cC----CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-ccc---chhHhcccCCCEEEEeeCh
Confidence            64    556667999999999999999999999999999999999999988864 111   2222334556889999999


Q ss_pred             ccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283          255 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       255 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  334 (410)
                      |.+|++|+|+||+  ++.++++.++    +.....  ..+++..++.++...|++.       +++++.+++++++++++
T Consensus       215 K~~~~~G~r~g~~--~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l  279 (361)
T 3ftb_A          215 KFFAMPGIRFGYG--ITNNKEIAAK----IKAKQN--PWNINCFAEMAAINCLKDT-------NYIEESLLWIKKERKRF  279 (361)
T ss_dssp             STTSCGGGCCEEE--EESCHHHHHH----HHTTSC--TTCSCHHHHHHHHHTSSCH-------HHHHHHHHHHHHHHHHH
T ss_pred             hhcCCCCcceeEE--EeCCHHHHHH----HHhhCC--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHH
Confidence            9999999999997  4457775444    443322  2356777878888888863       23568888999999999


Q ss_pred             HHHhhhccCCCCCcc-cccCCcceeeecCC---CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHH
Q 015283          335 FDSLSAKDKSGKDWS-FILRQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLA  399 (410)
Q Consensus       335 ~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~  399 (410)
                      .+.|+ +++.   +. ..++. +.|+|+.+   +. ++...+.+ +||.+.||        +  ||+++  +.+++++++
T Consensus       280 ~~~l~-~~~~---~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~  351 (361)
T 3ftb_A          280 IEELN-KIGF---IKRVFSPH-ANFVLCRLENISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFL  351 (361)
T ss_dssp             HHHHH-HSSS---EEEEECCS-SSEEEEEESSSCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHH
T ss_pred             HHHHH-hCCC---CceecCCC-CeEEEEEcCCCCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHH
Confidence            99998 7742   45 44454 45565543   34 44566665 59999875        2  99985  678888999


Q ss_pred             HHHHHHhhh
Q 015283          400 DAIIDSYHN  408 (410)
Q Consensus       400 ~~l~~~l~~  408 (410)
                      +.|+++.+.
T Consensus       352 ~~l~~~~~~  360 (361)
T 3ftb_A          352 RALKGVENN  360 (361)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            998887654

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=5.8e-35  Score=275.89  Aligned_cols=316  Identities=15%  Similarity=0.127  Sum_probs=235.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      .++|+|+.|++    ..+ .++.+.+++.+.+...  ....|+ ..+..++|+++++++.      +++++|++  ++||
T Consensus        26 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~la~~~g------~~~~~i~~--t~g~   91 (360)
T 3hdo_A           26 ASWIKLNTNEN----PYP-PSPEVVKAILEELGPDGAALRIYP-SASSQKLREVAGELYG------FDPSWIIM--ANGS   91 (360)
T ss_dssp             TTSEECSSCCC----SSC-CCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHHHHHHHT------CCGGGEEE--ESSH
T ss_pred             cceeeccCCCC----CCC-CCHHHHHHHHHHHhcccchhhcCC-CCchHHHHHHHHHHhC------cCcceEEE--cCCH
Confidence            46899999987    333 3789999998887553  125674 4577999999999973      23789999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++++.+++.  ..+.+||+|++++|+|.++...++..|.+++.+++.  +++.+  +++++.+     ++.++++++|+|
T Consensus        92 ~~al~~~~~--~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~--~~l~~~~-----~~~~v~i~~p~n  160 (360)
T 3hdo_A           92 DEVLNNLIR--AFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLT--GDFRI--AGFPERY-----EGKVFFLTTPNA  160 (360)
T ss_dssp             HHHHHHHHH--HHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBC--TTSSB--TTCCSSB-----CSSEEEEESSCT
T ss_pred             HHHHHHHHH--HHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCC--CCCCH--HHHHhhc-----CCCEEEEeCCCC
Confidence            999999843  346799999999999999999999999999999883  33333  4443322     223666799999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++.+++.+|   |+++|+++|+||+|.+|...    ...   ......+++++++|+||.+|++|+|+||+++  
T Consensus       161 ptG~~~~~~~l~~l---~~~~~~~li~De~~~~~~~~----~~~---~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~--  228 (360)
T 3hdo_A          161 PLGPSFPLEYIDEL---ARRCAGMLVLDETYAEFAES----NAL---ELVRRHENVVVTRTLSKSYSLAGMRIGLAIA--  228 (360)
T ss_dssp             TTCCCCCHHHHHHH---HHHBSSEEEEECTTGGGSSC----CCT---HHHHHCSSEEEEEESTTTTSCTTSCCEEEEC--
T ss_pred             CCCCCcCHHHHHHH---HHHCCCEEEEECChHhhCCc----chh---HHhccCCCEEEEecchHhhcCCccceeeEee--
Confidence            99999998876665   78899999999999987422    111   2234567899999999999999999999744  


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                       ++++++.+...    ..  ..+++.+++.++...|++.+       ++++.+++++++++++.+.|+ +.+    +.+.
T Consensus       229 -~~~~~~~~~~~----~~--~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~----~~~~  289 (360)
T 3hdo_A          229 -RPEVIAALDKI----RD--HYNLDRLAQAACVAALRDQA-------YLSECCRRIRETREWFTTELR-SIG----YDVI  289 (360)
T ss_dssp             -CHHHHHHHHHH----SC--SCCSCHHHHHHHHHHHHCHH-------HHHHHHHHHHHHHHHHHHHHH-HTT----CEEC
T ss_pred             -CHHHHHHHHHh----CC--CCCCCHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CEEc
Confidence             77865555432    22  23567777777777777532       346788889999999999998 776    4555


Q ss_pred             cCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          352 LRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       352 ~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++. +.|+|+.+   +.+.+.+.+.++||.+.+++        ||+++  ++++++++++.|+++-+.
T Consensus       290 ~~~-~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~~~  354 (360)
T 3hdo_A          290 PSQ-GNYLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIGEG  354 (360)
T ss_dssp             CCS-SSEEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHHC-
T ss_pred             CCC-ccEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHhcc
Confidence            444 55666533   44444444455799998852        99986  789999999999988653

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=5.8e-37  Score=292.60  Aligned_cols=323  Identities=13%  Similarity=0.110  Sum_probs=231.7

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhh--cc-CCCccCcCCccc-----HHHHHHHHHHhcCCCCCcccC-Cce
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLML--ER-GENKEYLPIEGL-----AAFNKVTAELLFGADNSVLKE-QRV  103 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~-~~~~~y~~~~g~-----~~lr~aia~~~~~~~~~~~~~-~~i  103 (410)
                      .+++|+|+.|.|    ..+ .++.+.+++.+..  .. .....|++..|.     +++|+++++++. .+|..+++ ++|
T Consensus        21 ~~~~i~l~~g~p----~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i   94 (391)
T 3bwn_A           21 SDFVVNLDHGDP----TAY-EEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI   94 (391)
T ss_dssp             TTSCEECSSCCC----GGG-HHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred             CCCeeEcCCCCC----CCC-CCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence            457899999987    333 2455555543322  11 123679889998     999999999976 55777766 589


Q ss_pred             EEEecCChhhHHHHHHHHHHHhCCCC----EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC
Q 015283          104 ATVQGLSGTGSLRLAAALIERYFPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       104 ~~~~t~ggt~a~~~~~~~~~~~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~  179 (410)
                      ++  |+|+++++.+++..+  +.+||    +|++++|+|..|...++..|++++.+++.. +       .++    .  +
T Consensus        95 ~~--t~G~~~al~~~~~~l--~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-~-------~l~----~--~  156 (391)
T 3bwn_A           95 VV--GTGSTQLCQAAVHAL--SSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDA-W-------GFD----K--K  156 (391)
T ss_dssp             EE--EEHHHHHHHHHHHHH--HHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEES-T-------TCC----C--C
T ss_pred             EE--eCChHHHHHHHHHHh--cCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCH-H-------HcC----C--C
Confidence            99  999999999984433  66999    999999999999999999999998888732 2       221    1  2


Q ss_pred             CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      +++++++++||||||.+++     +|++.++.++++||+||+|..   +..    ..+   ....+++++++||||.+|+
T Consensus       157 ~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~~~----~~l---~~~~~~~i~~~S~SK~~g~  221 (391)
T 3bwn_A          157 GPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---PHY----TPI---TRRQDHDIMLFTFSKITGH  221 (391)
T ss_dssp             SCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS---TTT----SCC---CCCBCCSEEEEEHHHHHSC
T ss_pred             CCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---CCC----Ccc---ccCCCCeEEEEechhhcCC
Confidence            5677778999999999996     344422223399999999973   110    111   1134689999999999999


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHH-------HHHHHHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEW-------KAEMEMMAGRIKNVRQ  332 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~  332 (410)
                      +|+|+||+  +++++++++++.....    ....+++.++|.++..+|++..   .|       .+++++.++.++++++
T Consensus       222 ~GlRiG~~--~~~~~~l~~~l~~~~~----~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  292 (391)
T 3bwn_A          222 AGSRIGWA--LVKDKEVAKKMVEYII----VNSIGVSKESQVRTAKILNVLK---ETCKSESESENFFKYGREMMKNRWE  292 (391)
T ss_dssp             GGGCEEEE--EECCHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHHHHH---HHTTCCCTTTSHHHHHHHHHHHHHH
T ss_pred             CccceEEE--EecCHHHHHHHHHHhc----ccccCCCHHHHHHHHHHHhCcc---hhccccccHHHHHHHHHHHHHHHHH
Confidence            99999998  4456776666554332    1234678888888887776532   11       3456788999999999


Q ss_pred             HHHHHhhhccCCCCCccccc-------------CCcceeeecCCC-HHHHHHhhhcCcEEEcCC-------C--eEEecC
Q 015283          333 KLFDSLSAKDKSGKDWSFIL-------------RQIGMFSFTGLN-KAQSDNMTNKWHVYMTKD-------G--RISLAG  389 (410)
Q Consensus       333 ~l~~~l~~~~g~~~~~~~~~-------------~~~~~~~~~~~~-~~~~~~ll~~~gi~v~~~-------g--Ris~~~  389 (410)
                      ++.+.|+ +++.   +.+..             +++|+|+|+++. .+.+.++++++||.+.||       +  |||++.
T Consensus       293 ~l~~~L~-~~~~---~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~  368 (391)
T 3bwn_A          293 KLREVVK-ESDA---FTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS  368 (391)
T ss_dssp             HHHHHHH-TCSS---EECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS
T ss_pred             HHHHHHH-hCCC---cccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC
Confidence            9999998 7631   33322             345668888763 345666777789999985       2  999987


Q ss_pred             CCcccHHHHHHHHHHHhhh
Q 015283          390 LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~  408 (410)
                       +++++++++++|++++++
T Consensus       369 -~~e~i~~~~~~L~~~~~~  386 (391)
T 3bwn_A          369 -REDVFNVFLERLANMKLI  386 (391)
T ss_dssp             -CHHHHHHHHHHHHSCC--
T ss_pred             -CHHHHHHHHHHHHHHHHh
Confidence             889999999999988754

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=5.7e-35  Score=273.23  Aligned_cols=309  Identities=16%  Similarity=0.146  Sum_probs=232.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ++.|+|+.|.+    ..+ .++.+.+++.+.+.......|+ ..+..++|+++++++.+.   .+++++|++  ++|+++
T Consensus        19 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~-~~~~~~lr~~la~~~~~~---~~~~~~v~~--~~G~~~   87 (335)
T 1uu1_A           19 RDKTYLALNEN----PFP-FPEDLVDEVFRRLNSDALRIYY-DSPDEELIEKILSYLDTD---FLSKNNVSV--GNGADE   87 (335)
T ss_dssp             CCSEEESSCCC----SSC-CCHHHHHHHHHTCCGGGGGSCC-CSSCHHHHHHHHHHHTCS---SCCGGGEEE--ESSHHH
T ss_pred             CcceECCCCCC----CCC-CCHHHHHHHHHHhhhhhhhcCC-CCchHHHHHHHHHHcCCC---CCCHHHEEE--cCChHH
Confidence            35799999986    322 3789999998877322236674 457999999999998643   344789999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      ++.++..   .+  ||+|+++ |+|..+...++..|.+++.+++  ++++.+|++.+     +   +++++++++|+|||
T Consensus        88 al~~~~~---~~--gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l-----~---~~~~v~l~~p~npt  151 (335)
T 1uu1_A           88 IIYVMML---MF--DRSVFFP-PTYSCYRIFAKAVGAKFLEVPL--TKDLRIPEVNV-----G---EGDVVFIPNPNNPT  151 (335)
T ss_dssp             HHHHHHH---HS--SEEEECS-SSCHHHHHHHHHHTCEEEECCC--CTTSCCCCCCC-----C---TTEEEEEESSCTTT
T ss_pred             HHHHHHH---Hh--CCcEEEC-CCcHHHHHHHHHcCCeEEEecc--CCCCCCCHHHc-----C---CCCEEEEeCCCCCC
Confidence            9999743   33  8999999 9999999999999999998887  34567888877     2   56677779999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |.+++.+++++|+++|   | ++|+||+|.++...    ..  . ...+..+++++++|+||.+|++|+|+||+++   +
T Consensus       152 G~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~----~~--~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~---~  217 (335)
T 1uu1_A          152 GHVFEREEIERILKTG---A-FVALDEAYYEFHGE----SY--V-DFLKKYENLAVIRTFSKAFSLAAQRVGYVVA---S  217 (335)
T ss_dssp             CCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCC----CC--G-GGGGTCSSEEEEEESTTTTTCGGGCCEEEEE---C
T ss_pred             CCCCCHHHHHHHHHhC---C-EEEEECcchhhcch----hH--H-HHhhhCCCEEEEecchhhcCCcccCeEEEEe---C
Confidence            9999999999998877   7 89999999876532    11  1 2234456899999999999999999999855   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      +++++++..    ... . .+++.+++.++...|++.       +++++.+++++++++++.+.|+ +.|    +.+. +
T Consensus       218 ~~~~~~l~~----~~~-~-~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~-~  278 (335)
T 1uu1_A          218 EKFIDAYNR----VRL-P-FNVSYVSQMFAKVALDHR-------EIFEERTKFIVEERERMKSALR-EMG----YRIT-D  278 (335)
T ss_dssp             HHHHHHHHH----HSC-T-TCSCHHHHHHHHHHHHTH-------HHHHHHHHHHHHHHHHHHHHHH-HHT----CCBC-C
T ss_pred             HHHHHHHHH----hcC-C-CCcCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHH-HCC----cEEc-C
Confidence            786555543    222 2 256777788887777653       2346778888999999999998 776    3443 4


Q ss_pred             CcceeeecCCC---H-HHHHHhhhcCcEEEcCCC---eEEecCCCcccHHHHHHHHHHH
Q 015283          354 QIGMFSFTGLN---K-AQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       354 ~~~~~~~~~~~---~-~~~~~ll~~~gi~v~~~g---Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      ..++|+|+.+.   . ++...+.+ +||.+.|+.   ||+++  +++++++++++|+++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~iRis~~--~~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          279 SRGNFVFVFMEKEEKERLLEHLRT-KNVAVRSFREGVRITIG--KREENDMILRELEVF  334 (335)
T ss_dssp             CCSSEEEEECCTHHHHHHHHHHHH-HTEEEEEETTEEEEECC--CHHHHHHHHHHHHCC
T ss_pred             CCCeEEEEECCCCCHHHHHHHHHH-CCEEEEECCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence            45678887663   2 34556655 699998743   99985  457899999998765

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=3.2e-35  Score=283.41  Aligned_cols=327  Identities=11%  Similarity=0.057  Sum_probs=239.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhc-cCC-CccCcCCc-c---cHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-RGE-NKEYLPIE-G---LAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~-~~~y~~~~-g---~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      ..+|+|+.|.+    ..+ .++.+++++.+.+. .+. ...|++.. |   .++||+++++++....+..+++++|++  
T Consensus        56 ~~~i~l~~g~~----~~~-~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~--  128 (427)
T 2hox_A           56 GCSADVASGDG----LFL-EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVF--  128 (427)
T ss_dssp             TCCEECCSCCC----GGG-HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEE--
T ss_pred             CceEEecCcCC----CCC-CCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEE--
Confidence            36799999987    332 25677778777763 232 13498877 8   999999999998766555667899999  


Q ss_pred             cCChhhHHHHHHHHHHH--------hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC
Q 015283          108 GLSGTGSLRLAAALIER--------YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~  179 (410)
                      |+|+++++.+++  ...        +.+||+|++++|+|+.|...++..|.+++.+        .+|++.+++.+.+   
T Consensus       129 t~G~~~al~~~~--~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~---  195 (427)
T 2hox_A          129 GVGVTQLIHGLV--ISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNP---  195 (427)
T ss_dssp             ESHHHHHHHHHH--HHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCG---
T ss_pred             eCCHHHHHHHHH--HHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcC---
Confidence            999999999984  344        6799999999999999999999999887643        3577888877654   


Q ss_pred             CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      +++++++++||||||.+++ +.+       +  ++..+.|++|.+   . . .   ++..+ . .+++++++||||.+|+
T Consensus       196 ~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~---~-~-~---s~~~~-~-~~~~i~~~S~SK~~g~  255 (427)
T 2hox_A          196 EQYIEMVTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW---P-H-Y---TPIKY-K-ADEDILLFTMSKFTGH  255 (427)
T ss_dssp             GGEEEEEESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS---T-T-T---SCCCS-C-BCCSEEEEEHHHHTSC
T ss_pred             CceEEEEcCCCCCcccccH-HHH-------c--CCCEEEeecccC---C-C-C---Ccccc-C-CCceEEEEeChhcCCC
Confidence            5677788999999999999 422       2  455677776642   1 0 1   11111 1 4589999999999999


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh-hHH----HHHHHHHHHHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA-LFD----EWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~-~~~----~~~~~~~~~~~~~~~~~~~l  334 (410)
                      +|+|+||+  +++++++++++.....    ....+++.++|.++..+|++.. +.+    .+.+++++.++.++++++++
T Consensus       256 ~G~RiG~~--~~~~~~l~~~l~~~~~----~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l  329 (427)
T 2hox_A          256 SGSRFGWA--LIKDESVYNNLLNYMT----KNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNI  329 (427)
T ss_dssp             GGGCCEEE--EECCHHHHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEE--EECCHHHHHHHHHHHH----hcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHH
Confidence            99999998  4445786666655332    2234678888888877776531 110    12345678889999999999


Q ss_pred             HHHhhhcc-CCCC----------CcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC-------C--eEEecCCC
Q 015283          335 FDSLSAKD-KSGK----------DWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD-------G--RISLAGLS  391 (410)
Q Consensus       335 ~~~l~~~~-g~~~----------~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~  391 (410)
                      .+.|+ +. |+.-          .+.+..|.+++|+|+.+.   .+++.++++++||.+.||       +  |||++. +
T Consensus       330 ~~~L~-~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~  407 (427)
T 2hox_A          330 TALLD-QSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-T  407 (427)
T ss_dssp             HHHHT-TSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-C
T ss_pred             HHHHH-hCcCccccccccccccccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-C
Confidence            99998 76 3210          022345677999998763   345778876789999885       2  999987 8


Q ss_pred             cccHHHHHHHHHHHhhh
Q 015283          392 LAKCEYLADAIIDSYHN  408 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~~  408 (410)
                      ++++++++++|++++.+
T Consensus       408 ~e~l~~~l~~l~~~~~~  424 (427)
T 2hox_A          408 QDDFDQLMYYLKDMVKA  424 (427)
T ss_dssp             HHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998764

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.2e-33  Score=265.80  Aligned_cols=311  Identities=14%  Similarity=0.129  Sum_probs=228.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .++|||+.|.+    ..+ .++.+.+++.+.+..  ...|++..+ .++|+++++++.      +++++|++  |+|+++
T Consensus        15 ~~~id~~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~--t~g~~~   78 (350)
T 3fkd_A           15 SEIVNFSTTVW----TDG-DKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRNS------VDNNAILV--TNGPTA   78 (350)
T ss_dssp             -CCEECSCCSC----CCS-CCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHTT------CCGGGEEE--ESHHHH
T ss_pred             ccEEEccCCCC----CCC-CCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHHH
Confidence            57899999986    333 378999998887732  367866655 899999999963      23689999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee-ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY-YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++.++...   +. ||+|+++.|+|..+...++..|++++.+++ .+.+  .+++           ++++++++++|+||
T Consensus        79 al~~~~~~---l~-gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~~-----------~~~~~v~i~~p~np  141 (350)
T 3fkd_A           79 AFYQIAQA---FR-GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIG--EADF-----------SNMDFCWLCNPNNP  141 (350)
T ss_dssp             HHHHHHHH---TT-TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGG--GSCC-----------TTCSEEEEESSCTT
T ss_pred             HHHHHHHH---HC-CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccc--cCcc-----------CCCCEEEEeCCCCC
Confidence            99997433   33 999999999999999999999999999987 3222  2333           24556666999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|+++  ++|+||+|.++.+.+. ..  .  ...+..+++++++|+||.+|++|+|+||+++   
T Consensus       142 tG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~-~~--~--~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~---  211 (350)
T 3fkd_A          142 DGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEV-IR--P--ADIKGRKNLVMVYSFSHAYGIPGLRIGYIVA---  211 (350)
T ss_dssp             TCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCC-CC--G--GGGTTCSSEEEEEESHHHHSCGGGCCEEEEC---
T ss_pred             cCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcc-hh--h--HHhhcCCCEEEEecCchhccCcchheEeEEe---
Confidence            99999999999999888765  9999999998886421 11  1  2234557899999999999999999999844   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA-LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                      ++++++++    .....  ..+++.+++.++...|++.+ +.       ++.++.. ++++++.+.|+ +++.   +.+.
T Consensus       212 ~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~-~~~~~l~~~L~-~~~~---~~~~  273 (350)
T 3fkd_A          212 NKDFMKRV----AAFST--PWAVNALAIEAAKFILIHPAQFT-------LPIRKWQ-RNTVDFITALN-RLDG---VEVH  273 (350)
T ss_dssp             CHHHHHHH----HTTCC--TTCSCHHHHHHHHHHHHCTTTTC-------CCHHHHH-HHHHHHHHHHH-HSTT---EEEC
T ss_pred             CHHHHHHH----HHhCC--CCCCCHHHHHHHHHHHhCHHHHH-------HHHHHHH-HHHHHHHHHHh-cCCC---cEEC
Confidence            77755544    33322  23567778888877777653 21       2233333 78888888888 7721   4555


Q ss_pred             cCCcceeeecCC---CH-HHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          352 LRQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       352 ~~~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++. +.|+|+.+   +. ++.+.|.+++||.+.||.          ||+++  ++++++++++.|++++++
T Consensus       274 ~~~-~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~  341 (350)
T 3fkd_A          274 PSG-TTFFLLRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEK  341 (350)
T ss_dssp             CCS-SSEEEEEESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC
T ss_pred             CCC-CcEEEEECCCCCHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence            444 55555433   33 456667664799998762          99985  678899999999998765

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=8.4e-32  Score=257.71  Aligned_cols=329  Identities=11%  Similarity=0.031  Sum_probs=235.3

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ++..|||+.|.+   .+.+ .++.+.+++.+.+...  ....|.+..|..++++++++++.+..+    .+++++  ++|
T Consensus        42 g~~~idl~~~~~---~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~--~~g  111 (398)
T 3a2b_A           42 GRRVLMFGSNSY---LGLT-TDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAIL--FST  111 (398)
T ss_dssp             TEEEEECSCSCT---TCGG-GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEE--ESS
T ss_pred             CceEEEeecccc---cCCC-CCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEE--ECC
Confidence            346899999865   1332 3688888887776431  123455667777888888888766554    357888  999


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC-CcEEEEeCCC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG-GSFILLHGCA  189 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~~ii~~~p  189 (410)
                      |++++..+.  ...+.+||.|++++|+|+.+...++..|.+++.+++       +|++.+++.+++.++ +++++++++|
T Consensus       112 gt~a~~~~~--~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~  182 (398)
T 3a2b_A          112 GFQSNLGPL--SCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGI  182 (398)
T ss_dssp             HHHHHHHHH--HHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESB
T ss_pred             HHHHHHHHH--HHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCC
Confidence            999999984  333679999999999999999999999999888875       488999999876322 5778888999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc-EEEEecccccccccCCCcceEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      +||||.+.+   +++|.++|++||+++|+||+|..+.++.   ...++....+..++ +++++|+||.++++|   ||++
T Consensus       183 ~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~  253 (398)
T 3a2b_A          183 FSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGH---KGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVA  253 (398)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG---GGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEE
T ss_pred             CCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCC---CCCchHhhcCCCcCCeEEEecccccccCCC---cEEE
Confidence            999999876   6788888999999999999998876531   11122122222234 699999999999778   9975


Q ss_pred             EEeCCchhHHHHHHHHHhhccCcccCCChhHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283          269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD  347 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~  347 (410)
                      +   ++++++.+.......   ....++...+.+ +...|++.       ++.++.+++++++++++.+.|+ ++|    
T Consensus       254 ~---~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~g----  315 (398)
T 3a2b_A          254 G---DADVIDFLKHNARSV---MFSASMTPASVASTLKALEII-------QNEPEHIEKLWKNTDYAKAQLL-DHG----  315 (398)
T ss_dssp             E---CHHHHHHHHHHCHHH---HSSBCCCHHHHHHHHHHHHHH-------HHCTHHHHHHHHHHHHHHHHHH-HTT----
T ss_pred             e---CHHHHHHHHHhcccc---eecCCCCHHHHHHHHHHHHHH-------hhCHHHHHHHHHHHHHHHHHHH-hcC----
Confidence            5   778666655431111   122334444443 33444321       2245778899999999999998 776    


Q ss_pred             cccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          348 WSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       348 ~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.+..+. ++|+|+.+.     .++..+++++ ||.+.|+         +  ||+++. .+++++++++++|+++++++
T Consensus       316 ~~~~~~~-g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~  392 (398)
T 3a2b_A          316 FDLGATE-SPILPIFIRSNEKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA  392 (398)
T ss_dssp             CCBCSCC-SSEEEEECCCHHHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCcCCCC-CCEEEEEcCCHHHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence            3555554 677777553     2345666665 9999875         2  999875 58999999999999998764

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.97  E-value=4e-30  Score=247.62  Aligned_cols=326  Identities=12%  Similarity=0.078  Sum_probs=228.9

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccC------CCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG------ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      ++++|+.|.+    +  +.++.+.+++.+.+...      ....|++  ..+..++|+++++++...     +++++++ 
T Consensus        28 ~~i~l~~~~~----~--~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~-   95 (420)
T 1t3i_A           28 PLVYLDNAAT----S--QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINAR-----SPREIVY-   95 (420)
T ss_dssp             ECEECBTTTC----C--CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE-
T ss_pred             ceEEecCCcc----C--CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE-
Confidence            4789998887    3  34688988888776431      1134543  467899999999997542     2678999 


Q ss_pred             ecCChhhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283          107 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~  180 (410)
                       ++||++++.++...+.  .+.+||+|++++|+|..    +...++..|.+++.++.  .+++.+|++.+++.+++   +
T Consensus        96 -~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~---~  169 (420)
T 1t3i_A           96 -TRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL--DEQESFDLEHFKTLLSE---K  169 (420)
T ss_dssp             -ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB--CTTSSBCHHHHHHHCCT---T
T ss_pred             -cCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc--CCCCCcCHHHHHHhhCC---C
Confidence             9999999999844331  16799999999999998    45666778999998887  35677899999999875   6


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      ++++++++|+||||.+++   +++|.++|++||+++|+|++|..+...   .   .+...    +.++++.|+||.+|++
T Consensus       170 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~---~~~~~----~~di~~~s~sK~~~~~  236 (420)
T 1t3i_A          170 TKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---L---DVQLI----DCDWLVASGHKMCAPT  236 (420)
T ss_dssp             EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---C---CHHHH----TCSEEEEEGGGTTSCT
T ss_pred             ceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---C---chhhc----CCCEEEEehhhhcCCC
Confidence            778888999999999888   678888899999999999998754421   1   11111    3678899999998877


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHhhccC--------------------cccCCChhHHHHHHH-HhCChhhHHHHHHH
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKRLARP--------------------MYSNPPVHGARIVAN-VVGNPALFDEWKAE  319 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~a~~-~l~~~~~~~~~~~~  319 (410)
                      |  +||+++   ++++++++    ......                    ...+.+...+.++.. .++.  + .  ...
T Consensus       237 g--~G~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~-~--~~~  302 (420)
T 1t3i_A          237 G--IGFLYG---KEEILEAM----PPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDY--L-T--DLG  302 (420)
T ss_dssp             T--CEEEEE---CHHHHHHS----CCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHH--H-H--HHC
T ss_pred             c--eEEEEE---chHHHhhc----CceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHH--H-H--HhH
Confidence            7  799855   77754443    222110                    112344444444322 2221  1 0  112


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC------cceeeec--CCCHHHHHHhhhcCcEEEcCC---------
Q 015283          320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ------IGMFSFT--GLNKAQSDNMTNKWHVYMTKD---------  382 (410)
Q Consensus       320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~------~~~~~~~--~~~~~~~~~ll~~~gi~v~~~---------  382 (410)
                      +++.+++++++++++.+.|+ ++.  + +++..+.      ++++.|.  +.+.+.+.+.++++||.+.++         
T Consensus       303 ~~~~~~~~~~~~~~l~~~L~-~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~  378 (420)
T 1t3i_A          303 MENIHNYEVELTHYLWQGLG-QIP--Q-LRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHR  378 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TCT--T-EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hCC--C-eEEeCCCccccccCCEEEEEECCCCHHHHHHHHHHCCeEEeeccccchHHHH
Confidence            46778888999999999998 762  1 4444443      4555442  224444445556679999876         


Q ss_pred             ----C---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          383 ----G---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 ----g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                          .   ||+++. .+++++++++++|+++++.+
T Consensus       379 ~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~  413 (420)
T 1t3i_A          379 LFDASGSARASLYFYNTKEEIDLFLQSLQATIRFF  413 (420)
T ss_dssp             HTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             hcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence                2   999875 48899999999999988754

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.97  E-value=2e-30  Score=246.62  Aligned_cols=322  Identities=13%  Similarity=0.084  Sum_probs=222.5

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCC-------CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGE-------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR  116 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~  116 (410)
                      ++|..+.++.++.+.+++.+.+....       ...|.+..+..++++++++++..      +++++++  ++||++++.
T Consensus         4 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--~~g~t~a~~   75 (384)
T 1eg5_A            4 YFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGV------SPSEIFF--TSCATESIN   75 (384)
T ss_dssp             ECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTS------CGGGEEE--ESCHHHHHH
T ss_pred             EEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCC------CCCeEEE--ECCHHHHHH
Confidence            44555555668999999888775321       01133456778999999999732      2578999  999999999


Q ss_pred             HHHHHHHH--hCCCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          117 LAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       117 ~~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++...+..  ..+||+|++++|+|+++...+   +..|.+++.+++.  .++.+|++.+++.+++   +++++++++|+|
T Consensus        76 ~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~~~n  150 (384)
T 1eg5_A           76 WILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD--SRGVVKLEELEKLVDE---DTFLVSIMAANN  150 (384)
T ss_dssp             HHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC--TTSCBCHHHHHHHCCT---TEEEEEEESBCT
T ss_pred             HHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC--CCCccCHHHHHHHhCC---CCeEEEEECCCC
Confidence            98554421  169999999999999886655   6789999988873  4577999999999875   677888899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcC--CcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          192 PTGIDPTPEQWEKIADVIQEKN--HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~--~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      |||.+++   +++|.++|+++|  +++|+||+|. ++..  ..   .+    ...+.++++.|+||.+|++|  +||+++
T Consensus       151 ptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~-~~~~--~~---~~----~~~~~di~~~s~sK~~g~~G--~G~~~~  215 (384)
T 1eg5_A          151 EVGTIQP---VEDVTRIVKKKNKETLVHVDAVQT-IGKI--PF---SL----EKLEVDYASFSAHKFHGPKG--VGITYI  215 (384)
T ss_dssp             TTCBBCC---HHHHHHHHHHHCTTCEEEEECTTT-TTTS--CC---CC----TTTCCSEEEEEGGGGTSCTT--CEEEEE
T ss_pred             CcccccC---HHHHHHHHHhcCCceEEEEEhhhh-cCCc--cc---Cc----hhcCCCEEEecHHHhcCCCc--eEEEEE
Confidence            9999988   567777899999  9999999987 3311  11   11    11246788999999999888  699854


Q ss_pred             EeCCchhHHHHHHHHHhh---ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283          270 VCSSSDLAARVKSQLKRL---ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~  346 (410)
                         ++++  ++...+...   ......+++..++.++...|+.      +.+++++.+++++++++++.+.|+ +.+   
T Consensus       216 ---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~-~~g---  280 (384)
T 1eg5_A          216 ---RKGV--PIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI------AVEELSEAAKHMEKLRSKLVSGLM-NLG---  280 (384)
T ss_dssp             ---CTTS--CCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH------HHHTHHHHHHHHHHHHHHHHHHHH-TTT---
T ss_pred             ---cCCC--ccccccccCcccccccCCCCChHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHhC-CCC---
Confidence               5542  111111110   0112235566666665555543      133457888899999999999998 755   


Q ss_pred             CcccccCC------cceeeecCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCc
Q 015283          347 DWSFILRQ------IGMFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSL  392 (410)
Q Consensus       347 ~~~~~~~~------~~~~~~~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~  392 (410)
                       +++..+.      ...|.+.+.+.+.+.+.+.++||.+.++                         +  ||+++. .++
T Consensus       281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~  359 (384)
T 1eg5_A          281 -AHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTE  359 (384)
T ss_dssp             -CEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCH
T ss_pred             -eEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCH
Confidence             3443321      1122233445544444445679999873                         2  999873 489


Q ss_pred             ccHHHHHHHHHHHhhhc
Q 015283          393 AKCEYLADAIIDSYHNV  409 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++|+++++++
T Consensus       360 ~~i~~~~~~l~~~~~~~  376 (384)
T 1eg5_A          360 EEVDYFLKKIEEILSFL  376 (384)
T ss_dssp             HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998764

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.97  E-value=6.2e-30  Score=244.66  Aligned_cols=328  Identities=11%  Similarity=0.049  Sum_probs=223.8

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC---Ccc--CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE---NKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~--y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +...|||+.|.|+   +. ..++.+.+++.+.+.. ..   ...  |....+..++++.+++++..       ++.+++ 
T Consensus        42 g~~~id~~~~~~~---g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~-  109 (399)
T 3tqx_A           42 EKEVLNFCANNYL---GL-ADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGT-------DDTILY-  109 (399)
T ss_dssp             TEEEEECSSCCTT---SC-TTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTC-------SEEEEE-
T ss_pred             CeeEEEeeccCcc---cc-cCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCC-------CcEEEE-
Confidence            3468999998652   21 1257777777666533 10   111  22344578999999999632       345554 


Q ss_pred             ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC---CcEE
Q 015283          107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFI  183 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~---~~~~  183 (410)
                        .+|++++..+.  ...+.+||.|++++|+|+.+...++..|.+++.++.       .|++.+++.+.+.+.   ++++
T Consensus       110 --~sGt~a~~~~l--~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~  178 (399)
T 3tqx_A          110 --SSCFDANGGLF--ETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKL  178 (399)
T ss_dssp             --SCHHHHHHTTH--HHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEE
T ss_pred             --CchHHHHHHHH--HHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceE
Confidence              56688888763  344679999999999999999999999999888876       367788887765322   6788


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCC
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~  262 (410)
                      +++++|+||||.+++   +++|+++|++||+++|+||+|.....+ ....  +.....+ ..+.+++++|+||.++  |+
T Consensus       179 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~~~~--~~~~~~~~~~~~di~~~s~sK~~~--g~  250 (399)
T 3tqx_A          179 IATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIG-ENGR--GTPEYCGVADRVDILTGTLGKALG--GA  250 (399)
T ss_dssp             EEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSS-TTSC--CHHHHHTCTTCCSEEEEESSSSSC--SS
T ss_pred             EEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccC-CCCC--chHHhhCCCCCCcEEEecchHhcc--cC
Confidence            888999999999888   778888899999999999999632222 1111  1112222 1245799999999998  44


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      +.||++.   ++++++.+.........  ...++...+.++...++..      .++.++.+++++++++++.+.|+ ++
T Consensus       251 ~gG~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~  318 (399)
T 3tqx_A          251 SGGYTSG---HKEIIEWLRNRSRPYLF--SNTVAPVIVATSLKVLELL------KTEGPQLRKQLQENSRYFRAGME-KL  318 (399)
T ss_dssp             CCEEEEE---CHHHHHHHHHHCHHHHS--SCCCCHHHHHHHHHHHHHH------HHTHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred             ceEEEEc---CHHHHHHHHHhCcceec--cCCCcHHHHHHHHHHHHHH------hhccHHHHHHHHHHHHHHHHHHH-Hc
Confidence            5599755   77876666553222211  1234444444444333311      13457888999999999999999 88


Q ss_pred             CCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------C----eEEec-CCCcccHHHHHHHHHHH
Q 015283          343 KSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------G----RISLA-GLSLAKCEYLADAIIDS  405 (410)
Q Consensus       343 g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------g----Ris~~-~~~~~~i~~~~~~l~~~  405 (410)
                      |    +.+.++. +.|+|+.+     ..++..++++ +||.+.++       +    ||+++ ..+++++++++++|+++
T Consensus       319 g----~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  392 (399)
T 3tqx_A          319 G----FQLVPGN-HPIIPVMLGDAQLATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQV  392 (399)
T ss_dssp             T----CCBCCCS-SSEEEEEEECHHHHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             C----CCcCCCC-CCEEEEEeCCHHHHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHH
Confidence            7    3555455 44555533     2345666766 69999843       2    99987 35899999999999999


Q ss_pred             hhhc
Q 015283          406 YHNV  409 (410)
Q Consensus       406 l~~~  409 (410)
                      ++++
T Consensus       393 ~~~~  396 (399)
T 3tqx_A          393 GKKL  396 (399)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            8765

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.97  E-value=4.1e-30  Score=244.72  Aligned_cols=323  Identities=12%  Similarity=0.049  Sum_probs=225.9

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE  123 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~  123 (410)
                      ++|..+.+++++.+.+++.+...    .+|.+.  ..++++++++++.+.+|.+ +++++++  ++||++++..+...  
T Consensus        22 ~l~~~~~~~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~--~~g~t~a~~~~~~~--   90 (386)
T 2dr1_A           22 KLFTAGPVACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLV--PSSGTGIMEASIRN--   90 (386)
T ss_dssp             EECCSSSCCCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEE--SSCHHHHHHHHHHH--
T ss_pred             eeecCCCcCCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEE--eCChHHHHHHHHHH--
Confidence            44445556668889888776543    245332  2566666666665555543 3567888  99999999998433  


Q ss_pred             HhCCCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283          124 RYFPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ  201 (410)
Q Consensus       124 ~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~  201 (410)
                      .+.+||+|++++|+|.+  +...++..|++++.++..  .++.+|++.+++.+++. ++++++++++|+||||.+.+   
T Consensus        91 l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~---  164 (386)
T 2dr1_A           91 GVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYE--PGKAVKPEDLDDALRKN-PDVEAVTITYNETSTGVLNP---  164 (386)
T ss_dssp             HSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECC---
T ss_pred             hhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecC--CCCCCCHHHHHHHHhcC-CCCcEEEEEeecCCcchhCC---
Confidence            36799999999999998  888888999999999873  45678999999999642 25666777899999999765   


Q ss_pred             HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283          202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK  281 (410)
Q Consensus       202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~  281 (410)
                      +++|.++|++||+++|+|++|..+... .     .+    ...+.+++++|+||.++.++ ++||+++   ++++++++.
T Consensus       165 l~~i~~l~~~~~~~li~D~a~~~~~~~-~-----~~----~~~~~di~~~s~sK~~~~~~-g~G~~~~---~~~~~~~~~  230 (386)
T 2dr1_A          165 LPELAKVAKEHDKLVFVDAVSAMGGAD-I-----KF----DKWGLDVVFSSSQKAFGVPP-GLAIGAF---SERFLEIAE  230 (386)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTBTTBC-C-----CT----TTTTCSEEEEETTSTTCCCS-SCEEEEE---CHHHHHHHT
T ss_pred             HHHHHHHHHHcCCeEEEEccccccCcc-c-----cc----cccCCcEEEEeccccccCCC-ceEEEEE---CHHHHHHHh
Confidence            678888899999999999998765431 1     11    12246899999999998652 4899865   677666552


Q ss_pred             H------------HHHhh--ccCcccCCChhHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          282 S------------QLKRL--ARPMYSNPPVHGARIVANVVGNPALFDEWKAE--MEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       282 ~------------~~~~~--~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      .            .+...  ......+++...+.++...|+.      +.+.  +++.+++++++++++.+.|+ ++|  
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~g~~~~~~~~~~~~~~~l~~~L~-~~g--  301 (386)
T 2dr1_A          231 KMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRI------IEKMGGKEKWLEMYEKRAKMVREGVR-EIG--  301 (386)
T ss_dssp             TCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHHHH-HTT--
T ss_pred             cCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHHHHHHH-HcC--
Confidence            1            11111  1122335566666665544432      1222  56788899999999999998 776  


Q ss_pred             CCcccccCC---cceeeecCC----CH-HHHHHhhhcCcEEEcCC------C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          346 KDWSFILRQ---IGMFSFTGL----NK-AQSDNMTNKWHVYMTKD------G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       346 ~~~~~~~~~---~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                        +.+..+.   .+.++|+.+    +. ++.+++.++ ||.+.++      +  ||+++. .+++++++++++|++++++
T Consensus       302 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  378 (386)
T 2dr1_A          302 --LDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINE  378 (386)
T ss_dssp             --CCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             --CeeCcCccccCCceEEEEcCCCCCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence              3444442   345555432    34 446666665 9999875      2  999874 5899999999999998865


Q ss_pred             c
Q 015283          409 V  409 (410)
Q Consensus       409 ~  409 (410)
                      +
T Consensus       379 ~  379 (386)
T 2dr1_A          379 L  379 (386)
T ss_dssp             H
T ss_pred             c
Confidence            3

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.97  E-value=5e-30  Score=245.70  Aligned_cols=330  Identities=13%  Similarity=0.065  Sum_probs=227.3

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--Cc------cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NK------EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~------~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +++.|..|.+    +  +.++.+.+++.+.+....  .+      .|.+..+..++|+++++++...     ++++|++ 
T Consensus        23 ~~i~l~~~~~----~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~-   90 (406)
T 1kmj_A           23 PLAYLDSAAS----A--QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SAEELVF-   90 (406)
T ss_dssp             ECEECCTTTC----C--CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE-
T ss_pred             ceEEecCCcc----C--CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE-
Confidence            5788887776    3  347888988887764311  01      1335667899999999997442     2578999 


Q ss_pred             ecCChhhHHHHHHHHHHH--hCCCCEEEEcCCCCcchh----hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283          107 QGLSGTGSLRLAAALIER--YFPGAKVLISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~--~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~  180 (410)
                       ++||++++.++...+..  +.+||+|++++|+|.+..    ..++..|.+++.++..  +++.+|++.+++.+++   +
T Consensus        91 -~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~---~  164 (406)
T 1kmj_A           91 -VRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPTLFDE---K  164 (406)
T ss_dssp             -ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBC--TTSCBCGGGHHHHCCT---T
T ss_pred             -eCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecC--CCCCcCHHHHHHHhcc---C
Confidence             99999999998443321  579999999999987643    3456779999888873  4577899999999875   6


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      ++++++++|+||||.+++   +++|.++|++||+++|+|++|..+...   .   .+..    .+.+++++|+||.+|++
T Consensus       165 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~---~---~~~~----~~~d~~~~s~~K~~g~~  231 (406)
T 1kmj_A          165 TRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHP---V---DVQA----LDCDFYVFSGHKLYGPT  231 (406)
T ss_dssp             EEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---C---CHHH----HTCSEEEEEGGGTTSCT
T ss_pred             CeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCC---C---cccc----cCCCEEEEEchhccCCC
Confidence            788888999999999988   778888899999999999998754321   1   1111    13678899999999888


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHhhc-----------------cCcccCCChhHHHHHH-HHhCChhhHHHHHHHHHH
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKRLA-----------------RPMYSNPPVHGARIVA-NVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~a~-~~l~~~~~~~~~~~~~~~  322 (410)
                      |  +||+++   ++++++++........                 .....+.+...+.++. ..++.  +.   ...+++
T Consensus       232 G--~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~~---~~~~~~  301 (406)
T 1kmj_A          232 G--IGILYV---KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEY--VS---ALGLNN  301 (406)
T ss_dssp             T--CEEEEE---CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHH--HH---HHCHHH
T ss_pred             C--cEEEEE---eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHH--HH---HcCHHH
Confidence            8  799855   6775544322110000                 0011223444444432 22221  10   113467


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccC--Ccceeeec--CCCHHHHHHhhhcCcEEEcCC--------------C-
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILR--QIGMFSFT--GLNKAQSDNMTNKWHVYMTKD--------------G-  383 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~--~~~~~~~~--~~~~~~~~~ll~~~gi~v~~~--------------g-  383 (410)
                      .+++++++++++.+.|+ +++  + +.+..+  .++++.|.  +.+.+.+.+.+.++||.+.++              + 
T Consensus       302 ~~~~~~~~~~~l~~~L~-~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~  377 (406)
T 1kmj_A          302 IAEYEQNLMHYALSQLE-SVP--D-LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAM  377 (406)
T ss_dssp             HHHHHHHHHHHHHHHHT-TST--T-EEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCE
T ss_pred             HHHHHHHHHHHHHHHHh-cCC--C-eEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCe
Confidence            78888999999999998 762  1 455555  56666553  334444445555679998753              3 


Q ss_pred             -eEEecCC-CcccHHHHHHHHHHHhhhc
Q 015283          384 -RISLAGL-SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 -Ris~~~~-~~~~i~~~~~~l~~~l~~~  409 (410)
                       ||+++.. ++++++++++.|+++++.+
T Consensus       378 iRis~~~~~t~~~i~~~~~~l~~~~~~l  405 (406)
T 1kmj_A          378 CRASLAMYNTHEEVDRLVTGLQRIHRLL  405 (406)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence             9998753 8899999999999998754

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.97  E-value=3.4e-29  Score=238.41  Aligned_cols=322  Identities=12%  Similarity=0.071  Sum_probs=222.0

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC---CccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE---NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +...+||+.|.+   .+.+ .++.+.+++.+.+.. +.   ...|  ....+..++|+++++++. .      ++.++  
T Consensus        38 g~~~id~~~~~~---~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~------~~~i~--  104 (384)
T 1bs0_A           38 DRQYLNFSSNDY---LGLS-HHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG-Y------SRALL--  104 (384)
T ss_dssp             TEEEEECSCCCT---TSGG-GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT-C------SEEEE--
T ss_pred             CceEEEeeccCc---cCCC-CCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC-C------CcEEE--
Confidence            346789998863   1322 368888888777643 21   1223  345778999999999972 1      23444  


Q ss_pred             ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEe
Q 015283          107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH  186 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~  186 (410)
                       +.+|++++..+..  ..+.+||.|++++|+|+.+...++..|.+++.+|.       .|++++++.+++.++.++++++
T Consensus       105 -~~sGt~a~~~~~~--~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~  174 (384)
T 1bs0_A          105 -FISGFAANQAVIA--AMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVT  174 (384)
T ss_dssp             -ESCHHHHHHHHHH--HHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEE
T ss_pred             -eCCcHHHHHHHHH--HhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEE
Confidence             4666899988743  34679999999999999999999999999888874       4789999998864334788888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      ++|+||||.+++   +++|.++|++||+++|+||+|..+.++ ....  .+....+. ..+++++|+||.++++|   ||
T Consensus       175 ~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~~~~--~~~~~~~~-~~di~~~s~sK~~~~~G---G~  244 (384)
T 1bs0_A          175 EGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIG-EQGR--GSCWLQKV-KPELLVVTFGKGFGVSG---AA  244 (384)
T ss_dssp             ESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSS-GGGC--CHHHHTTC-CCSEEEEESSSTTSSCC---EE
T ss_pred             eCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceec-CCCC--chHHhcCC-CCcEEEeeccchhhccC---cE
Confidence            999999999998   668888899999999999999766532 1111  11111222 23489999999999777   99


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      +++   ++++++.+.........  ..+++.+.+.++...++..      .+ ..++.+++++++++++.+.|+ +++  
T Consensus       245 ~~~---~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~al~~~------~~~~~~~~~~~~~~~~~~l~~~L~-~~g--  310 (384)
T 1bs0_A          245 VLC---SSTVADYLLQFARHLIY--STSMPPAQAQALRASLAVI------RSDEGDARREKLAALITRFRAGVQ-DLP--  310 (384)
T ss_dssp             EEE---CHHHHHHHHHHCHHHHS--SBCCCHHHHHHHHHHHHHH------HSHHHHHHHHHHHHHHHHHHHHHT-TSS--
T ss_pred             EEe---CHHHHHHHHHhchhhhc--CCCCCHHHHHHHHHHHHHH------hccccHHHHHHHHHHHHHHHHHHH-hcC--
Confidence            855   77876665543211111  1235555555554444321      11 345778889999999999998 876  


Q ss_pred             CCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHHHHHHHH
Q 015283          346 KDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                        +++.+ ..+.++|+.+.     .++.+.+.+ +||.+.++         +  ||+++. .+++++++++++|+++
T Consensus       311 --~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          311 --FTLAD-SCSAIQPLIVGDNSRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             --CEECS-CCSSBCCEEEESHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             --CcccC-CCCCEEEEEeCCHHHHHHHHHHHHH-CCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence              34443 44556555442     234556665 59999864         2  899874 3889999999999875

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.97  E-value=4.5e-30  Score=243.17  Aligned_cols=323  Identities=12%  Similarity=0.009  Sum_probs=219.5

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--------CCccCcCCcccHHHHHH-HHHHhcCCCCCcccCCce
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--------ENKEYLPIEGLAAFNKV-TAELLFGADNSVLKEQRV  103 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~y~~~~g~~~lr~a-ia~~~~~~~~~~~~~~~i  103 (410)
                      +++.++|..|.+    . .++++.+.+++.+.+...        +...|.+..+..+++++ +++++..       + ++
T Consensus         6 ~~~~i~ld~~~~----~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~-------~-~v   72 (371)
T 2e7j_A            6 TKDFINIDPLQT----G-GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC-------D-VA   72 (371)
T ss_dssp             --CCEECCHHHH----T-CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS-------S-EE
T ss_pred             CCCcEEeccccc----C-CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCC-------C-EE
Confidence            456788887664    2 224789999988876442        11234567889999999 9999632       2 78


Q ss_pred             EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcccee--eecCCCcccChhhHHHHHhcCC--C
Q 015283          104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR--YYDPKTVGLDFEGMIADIKAAP--G  179 (410)
Q Consensus       104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~i~~~~--~  179 (410)
                      ++  ++||++++..+...+  +.+||+|++++|+|.++...++..|.+++.++  .  .+++.+|++.+++.+++..  +
T Consensus        73 ~~--~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~l~~~~~~~  146 (371)
T 2e7j_A           73 RV--TNGAREAKFAVMHSL--AKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTD--YPDYAITPENFAQTIEETKKRG  146 (371)
T ss_dssp             EE--ESSHHHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCC--TTTCCCCHHHHHHHHHHHTTTS
T ss_pred             EE--eCChHHHHHHHHHHH--hCCCCEEEEccCcchHHHHHHHHcCCeEEEeeccc--CCCCCcCHHHHHHHHHhhcccC
Confidence            88  999999999984433  77999999999999999999999999999988  5  3457899999999987321  2


Q ss_pred             CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      +++++++++|+||||.+++.   ++|.++|++||+++|+||+|..+...   .   .+..+    +.+++++|+||.++.
T Consensus       147 ~~~~v~~~~~~nptG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~---~---~~~~~----~~di~~~s~sK~~~~  213 (371)
T 2e7j_A          147 EVVLALITYPDGNYGNLPDV---KKIAKVCSEYDVPLLVNGAYAIGRMP---V---SLKEI----GADFIVGSGHKSMAA  213 (371)
T ss_dssp             CEEEEEEESSCTTTCCCCCH---HHHHHHHHTTTCCEEEECTTTBTTBC---C---CHHHH----TCSEEEEEHHHHSSC
T ss_pred             CeEEEEEECCCCCCcccCCH---HHHHHHHHHcCCeEEEECccccCCCC---C---Chhhc----CCCEEEecCCcCCCC
Confidence            67788889999999999875   77788899999999999998876532   1   11111    245899999999885


Q ss_pred             cCCCcceEEEEeCCchhHHH-HHHHHHhhcc-Cc------ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH--HH
Q 015283          260 YAERIGAMNVVCSSSDLAAR-VKSQLKRLAR-PM------YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI--KN  329 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~-~~~~~~~~~~-~~------~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~--~~  329 (410)
                      + .|+||+++   +++++++ +..    ... ..      ...++...+.++...++   .   +.+   +.++++  ++
T Consensus       214 ~-~~~G~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~---~~~---~~~~~~~~~~  276 (371)
T 2e7j_A          214 S-GPIGVMGM---KEEWAEIVLRR----SEKYKNKEVELLGCTARGATIITLMASFP---H---VRE---RIKRWDEEVE  276 (371)
T ss_dssp             C-SSCEEEEE---CTTTTTTTTCB----CSSCTTSBGGGTTCCCCSHHHHHHHHHHH---H---HHH---HGGGHHHHHH
T ss_pred             C-CCcEEEEE---echhhhhhccc----cccCcccccccccCCcCHHHHHHHHHHHH---H---HHH---HHHHHHHHHH
Confidence            4 59999855   5664433 322    111 01      11223332222222222   1   011   455666  78


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCC--cceeeecCC-CHH-HHHHhhhcCcEEEcC--------C---C--e-EEecC--
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQ--IGMFSFTGL-NKA-QSDNMTNKWHVYMTK--------D---G--R-ISLAG--  389 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~--~~~~~~~~~-~~~-~~~~ll~~~gi~v~~--------~---g--R-is~~~--  389 (410)
                      +++++.+.|+ +++    +.+..+.  .+.++|+.+ +.+ +.+.+. ++||.+.|        +   +  | ++++.  
T Consensus       277 ~~~~l~~~L~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~  350 (371)
T 2e7j_A          277 KARRFAAEME-KLG----IKQLGDNPHNHDLMFFHAEVLYEISKKAK-GGRFFLYRELKSRKIHGIKPGLTRYFKLSTYG  350 (371)
T ss_dssp             HHHHHHHHHH-HTT----CEEESSSSCCSSEEEEECHHHHHHHHHSS-SGGGHHHHHHHHTTEECSCTTCCSEEEEECTT
T ss_pred             HHHHHHHHHH-HcC----cEEecCCCccCceEEEECCCHHHHHHHHH-HCCEEEEeccccccccCCCCCceEEEEeeccC
Confidence            8888999998 775    3444442  355677665 333 345555 57998865        2   2  9 99985  


Q ss_pred             CCcccHHHHHHHHHHHhhhcC
Q 015283          390 LSLAKCEYLADAIIDSYHNVS  410 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~~~  410 (410)
                      .+++++++++++|++++++++
T Consensus       351 ~~~~~i~~~~~~l~~~~~~~~  371 (371)
T 2e7j_A          351 LSDEEVDYVLNAFKEIIEKYS  371 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHHHHHHHHHhcC
Confidence            489999999999999988753

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.97  E-value=6.6e-30  Score=244.06  Aligned_cols=318  Identities=14%  Similarity=0.094  Sum_probs=218.4

Q ss_pred             CCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHh
Q 015283           47 EELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERY  125 (410)
Q Consensus        47 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~  125 (410)
                      ..+..++++.+.+++.+....    .|.+  ...++++++++++.+..|.  +++ ++++  |+||++++..+...  .+
T Consensus        39 ~~~~~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~--~~~~~v~~--t~g~t~al~~~~~~--~~  106 (393)
T 1vjo_A           39 GPGPSNAHPSVLQAMNVSPVG----HLDP--AFLALMDEIQSLLRYVWQT--ENPLTIAV--SGTGTAAMEATIAN--AV  106 (393)
T ss_dssp             SSSCCCCCHHHHHHHSSCCCC----TTSH--HHHHHHHHHHHHHHHHHTC--CCSCEEEE--SSCHHHHHHHHHHH--HC
T ss_pred             cCCCCCCCHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhCC--CCCcEEEE--eCchHHHHHHHHHh--cc
Confidence            334445578999888776532    4543  2446666666665554443  356 8999  99999999998433  36


Q ss_pred             CCCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283          126 FPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE  203 (410)
Q Consensus       126 ~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~  203 (410)
                      .+||+|++++|+|..  +...++..|++++.++..  .++.+|++.+++.+++.  +++++++++|+||||.+.+   ++
T Consensus       107 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---l~  179 (393)
T 1vjo_A          107 EPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKP--WGEVFSLEELRTALETH--RPAILALVHAETSTGARQP---LE  179 (393)
T ss_dssp             CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CT
T ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHhhC--CceEEEEeccCCCcceecc---HH
Confidence            799999999999998  888888999999999873  35678999999998742  3456677999999999876   56


Q ss_pred             HHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH
Q 015283          204 KIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ  283 (410)
Q Consensus       204 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~  283 (410)
                      +|.++|+++|+++|+||+|. ++..  ..   .    ....+.++++.|+||.++.+| |+||+++   ++++++++...
T Consensus       180 ~i~~l~~~~~~~li~Dea~~-~g~~--~~---~----~~~~~~di~~~s~sK~l~~~~-~~G~l~~---~~~~~~~~~~~  245 (393)
T 1vjo_A          180 GVGELCREFGTLLLVDTVTS-LGGV--PI---F----LDAWGVDLAYSCSQKGLGCSP-GASPFTM---SSRAIEKLQRR  245 (393)
T ss_dssp             THHHHHHHHTCEEEEECTTT-TTTS--CC---C----TTTTTCSEEECCSSSTTCSCS-SCEEEEE---CHHHHHHHHTC
T ss_pred             HHHHHHHHcCCEEEEECCcc-ccCc--CC---c----ccccCccEEEEcCcccccCCC-ceEEEEE---CHHHHHHHhcc
Confidence            77888999999999999988 3321  11   1    112346788999999998787 9999865   77755554221


Q ss_pred             ---HHhh------------ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283          284 ---LKRL------------ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD  347 (410)
Q Consensus       284 ---~~~~------------~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~  347 (410)
                         ....            ...... +++..++.++...|+..     ..+++++.+++++++++++.+.|+ +++    
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g----  315 (393)
T 1vjo_A          246 RTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLI-----AQEGLANCWQRHQKNVEYLWERLE-DIG----  315 (393)
T ss_dssp             SSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HTT----
T ss_pred             CCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHH-----HHccHHHHHHHHHHHHHHHHHHHH-HcC----
Confidence               0000            001112 45666666665554421     122356888899999999999998 776    


Q ss_pred             cccccCCc---ceeeec----CCCH-HHHHHhhhcCcEEEcCCC--------eEEe-c-CCCcccHHHHHHHHHHHhh
Q 015283          348 WSFILRQI---GMFSFT----GLNK-AQSDNMTNKWHVYMTKDG--------RISL-A-GLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       348 ~~~~~~~~---~~~~~~----~~~~-~~~~~ll~~~gi~v~~~g--------Ris~-~-~~~~~~i~~~~~~l~~~l~  407 (410)
                      +++..+.+   +.+.++    +.+. ++.+++.+++||.+.|+.        ||++ + ..+++++++++++|+++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~  393 (393)
T 1vjo_A          316 LSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  393 (393)
T ss_dssp             CCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             CcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence            34444443   223333    2344 445666654599998752        9994 3 2256679999999998863

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.97  E-value=2.4e-28  Score=233.90  Aligned_cols=313  Identities=13%  Similarity=0.070  Sum_probs=213.3

Q ss_pred             eeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccH---HHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           37 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLA---AFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~---~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .+++.|.| |....+++.+.+.+++...........|+. .|.+   ++++++++++..        +++++  ++||++
T Consensus        21 ~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g~--------~~~i~--~~~g~~   88 (404)
T 1e5e_A           21 QFGAAIPP-IYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEKT--------EACVA--TSSGMG   88 (404)
T ss_dssp             TTCCSSCC-CCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHH
T ss_pred             CCCCcCCC-CcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhCC--------CcEEE--eCChHH
Confidence            46888888 555555556666666543222222356755 5665   899999999632        24555  688899


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA  189 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p  189 (410)
                      ++..+.  ...+.+||+|+++.|+|+++..    .++..|.+++.++..       |++++++.+++   +++++++++|
T Consensus        89 ai~~~~--~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~---~t~~v~l~~p  156 (404)
T 1e5e_A           89 AIAATV--LTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKP---NTKIVYFETP  156 (404)
T ss_dssp             HHHHHH--HHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCT---TEEEEEEESS
T ss_pred             HHHHHH--HHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCC---CCcEEEEECC
Confidence            999873  3347799999999999999888    677889998888762       78899988874   6788888999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHH-cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAM  267 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l  267 (410)
                      +||||.+++   +++|+++|++ +|+++|+||+|..+.+.   .   ++     ..+.++++.|+||.++.+|+|+ ||+
T Consensus       157 ~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~---~---~~-----~~~~di~~~S~sK~~~~~g~ri~G~~  222 (404)
T 1e5e_A          157 ANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT---N---PV-----DFGVDVVVHSATKYINGHTDVVAGLI  222 (404)
T ss_dssp             CTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC---C---GG-----GGTCSEEEEETTTTTTCSSCCCCEEE
T ss_pred             CCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC---C---cc-----ccCCEEEEEcCccccCCCCCCeEEEE
Confidence            999999885   7788888999 99999999999987742   1   11     1247899999999999999998 998


Q ss_pred             EEEeCCchhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC---
Q 015283          268 NVVCSSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK---  343 (410)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g---  343 (410)
                      ++   +++.++   +.+....... ....+...+.++...+++..          ...++..++.+.+.+.++ +..   
T Consensus       223 ~~---~~~~~~---~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~l~~~l~-~~~~v~  285 (404)
T 1e5e_A          223 CG---KADLLQ---QIRMVGIKDITGSVISPHDAWLITRGLSTLN----------IRMKAESENAMKVAEYLK-SHPAVE  285 (404)
T ss_dssp             EE---CHHHHH---HHHHTCCCCCCCCCCCHHHHHHHHHHHTTHH----------HHHHHHHHHHHHHHHHHH-TCTTEE
T ss_pred             EE---CHHHHH---HHHHHHHHhCCCCCCCHHHHHHHHHhHhHHH----------HHHHHHHHHHHHHHHHHH-hCCCee
Confidence            55   666443   1344433332 23566667777766776531          222233344444444444 332   


Q ss_pred             ---CCC-----CcccccCC----cceeeecCCC--HHHHHHhhhcCcEEEcC----------------------------
Q 015283          344 ---SGK-----DWSFILRQ----IGMFSFTGLN--KAQSDNMTNKWHVYMTK----------------------------  381 (410)
Q Consensus       344 ---~~~-----~~~~~~~~----~~~~~~~~~~--~~~~~~ll~~~gi~v~~----------------------------  381 (410)
                         .+.     .+++..++    ++++.| .+.  .+.+.+++++.||.+..                            
T Consensus       286 ~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~  364 (404)
T 1e5e_A          286 KVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKSGFEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREA  364 (404)
T ss_dssp             EEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETTHHHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHH
T ss_pred             EEECCCCCCCccHHHHHhhCCCCceEEEE-EeCCCHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHh
Confidence               000     12222232    677777 443  24566777777874321                            


Q ss_pred             ----CC--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          382 ----DG--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       382 ----~g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                          .+  |||++.   ++++++++.|+++++.
T Consensus       365 ~g~~~~~iRis~g~---e~~~~li~~l~~al~~  394 (404)
T 1e5e_A          365 AGITDGMIRLSVGI---EDADELIADFKQGLDA  394 (404)
T ss_dssp             TTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred             cCCCCCeEEEEeCC---CCHHHHHHHHHHHHHH
Confidence                13  999865   8999999999998765

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.97  E-value=5.5e-29  Score=234.48  Aligned_cols=331  Identities=11%  Similarity=0.031  Sum_probs=225.3

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      .|..|+|..+.+    +  +.++.+.+++.+.+..     |.+..|..++++++++++.+.++  .+++++++  ++||+
T Consensus        12 ~p~~i~l~~~~~----~--~~~~~v~~a~~~~~~~-----~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~--~~g~t   76 (359)
T 1svv_A           12 KPKPYSFVNDYS----V--GMHPKILDLMARDNMT-----QHAGYGQDSHCAKAARLIGELLE--RPDADVHF--ISGGT   76 (359)
T ss_dssp             ---CEECSCSCS----S--CCCHHHHHHHHHHTTC-----CCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEE--ESCHH
T ss_pred             CCeeEEecCCCc----C--CCCHHHHHHHHHHHhh-----ccccccccHHHHHHHHHHHHHhC--CCCccEEE--eCCch
Confidence            356788887654    3  3479999999887642     44455666777777777655444  34678999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhh--hhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEe
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLH  186 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~  186 (410)
                      +++..+...  .+.+||+|++++|+|..+..  .++..|.+++.++.   +++.+|++.+++.+++.    +.+++++++
T Consensus        77 ~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~  151 (359)
T 1svv_A           77 QTNLIACSL--ALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPC---PDGKLRVADIESALHENRSEHMVIPKLVYI  151 (359)
T ss_dssp             HHHHHHHHH--HCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECC---TTSCCCHHHHHHHHHHSCSTTSCEEEEEEE
T ss_pred             HHHHHHHHH--HhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeC---CCCeecHHHHHHHHHHHHhccCCCceEEEE
Confidence            999998443  36799999999999999887  47788999999986   25789999999999762    113677777


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC--CCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG--SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      ++| ||||.+++.+++++|+++|++||+++|+||+|.+|..+  +.......+..     ...++..|.+|..++  .+.
T Consensus       152 ~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-----~~d~~~~s~~K~g~~--~~~  223 (359)
T 1svv_A          152 SNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIAR-----LTDMFYIGATKAGGM--FGE  223 (359)
T ss_dssp             ESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHH-----HCSEEEEECTTTTCS--SCE
T ss_pred             EcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhh-----cCCEEEEecccCCCC--Cce
Confidence            888 79999999999999999999999999999998443211  11111111111     134677889997442  446


Q ss_pred             ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      |++++   ++++++++....... ...+...... ...+..++.+..        +++.+++++++++++.+.|+ ..+ 
T Consensus       224 g~l~~---~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~l~~~~--------~~~~~~~~~~~~~~l~~~L~-~~~-  288 (359)
T 1svv_A          224 ALIIL---NDALKPNARHLIKQR-GALMAKGWLL-GIQFEVLMKDNL--------FFELGAHSNKMAAILKAGLE-ACG-  288 (359)
T ss_dssp             EEEEC---SGGGCTTHHHHHHHT-TCCCTTTHHH-HHHHHHHTSTTH--------HHHHHHHHHHHHHHHHHHHH-HTT-
T ss_pred             EEEEE---cccHHHHHHHHHhcC-Ccccccchhh-HHHHHHHHhhhh--------HHHHHHHHHHHHHHHHHHhc-cCC-
Confidence            77643   777666655432111 1111111111 122233455432        24677788888888888886 555 


Q ss_pred             CCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcC---CC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          345 GKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTK---DG----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                         +.+..+.+++|+|+.+..++.+++++++||.+.+   .+    ||+++. .+++++++++++|+++++++
T Consensus       289 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  358 (359)
T 1svv_A          289 ---IRLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST  358 (359)
T ss_dssp             ---CCBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred             ---eEEccCCccceEEEEcCHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence               4555567788888877777777887755998754   22    998653 48999999999999988754

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.97  E-value=1.1e-29  Score=245.20  Aligned_cols=338  Identities=10%  Similarity=0.019  Sum_probs=217.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.+....|++  ++.+.+++.+.+....  ...|.+..+..++++++++++.+.     .+++|++  ++||
T Consensus        41 ~~~id~~~~~~~~~lg~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~--~~g~  111 (426)
T 1sff_A           41 REYLDFAGGIAVLNTGHL--HPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGD-----FAKKTLL--VTTG  111 (426)
T ss_dssp             CEEEESSHHHHTCTTCBT--CHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCS-----SCEEEEE--ESSH
T ss_pred             CEEEEcccChhhcccCCC--CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcc-----cccEEEE--eCch
Confidence            457899888742223442  6889999988875421  124667788999999999997321     1478999  9999


Q ss_pred             hhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhh-hhhhCCCC-------------ccceeeec---CCCcccChhhHHHH
Q 015283          112 TGSLRLAAALIER-YFPGAKVLISSPTWGNHKN-IFNDARVP-------------WSEYRYYD---PKTVGLDFEGMIAD  173 (410)
Q Consensus       112 t~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~-~~~~~g~~-------------~~~v~~~~---~~~~~~d~~~l~~~  173 (410)
                      ++++.++..+... ..+| +|++++|+|.++.. .+...|.+             ++.+++..   ..++.+|++.+++.
T Consensus       112 ~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~  190 (426)
T 1sff_A          112 SEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRI  190 (426)
T ss_dssp             HHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHH
Confidence            9999998654333 3465 89999999987643 44444432             44455521   11244789999998


Q ss_pred             HhcC--CCCcEEEEe-CCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          174 IKAA--PGGSFILLH-GCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       174 i~~~--~~~~~~ii~-~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +++.  +++++++++ ++++| || .++|.+++++|.++|++||++||+||+|.+|+..+   ....+.    ..+....
T Consensus       191 l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~----~~~~~~d  262 (426)
T 1sff_A          191 FKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTG---TLFAME----QMGVAPD  262 (426)
T ss_dssp             HHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGG----GTTSCCS
T ss_pred             HHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCccc---chhhhh----hcCCCCC
Confidence            8631  124555554 56678 99 78899999999999999999999999999876532   111111    1111222


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      +.||||.++. |+|+||+++   ++++++.+    .......+.+++.+++.++...|+...      +  ....+++++
T Consensus       263 i~s~sK~~~~-GlriG~~~~---~~~~~~~l----~~~~~~~~~~~~~~~~~a~~aal~~~~------~--~~~~~~~~~  326 (426)
T 1sff_A          263 LTTFAKSIAG-GFPLAGVTG---RAEVMDAV----APGGLGGTYAGNPIACVAALEVLKVFE------Q--ENLLQKAND  326 (426)
T ss_dssp             EEEECGGGGT-SSCCEEEEE---EHHHHTTS----CTTSBCCSSSSCHHHHHHHHHHHHHHH------H--TTHHHHHHH
T ss_pred             EEEEcccccC-CCceEEEEE---cHHHHhhh----ccCCcCcCCCCCHHHHHHHHHHHHHHH------h--cCHHHHHHH
Confidence            4499999996 999999865   66644433    221122223456666666654443110      0  123445556


Q ss_pred             HHHHHHHHhhhccC--CCCCcccccCCcceeeecCCC-------------HHHHHHhhhcCcEEEcCCC------eEEec
Q 015283          330 VRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKDG------RISLA  388 (410)
Q Consensus       330 ~~~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ll~~~gi~v~~~g------Ris~~  388 (410)
                      +++++.+.|+ +++  .+. +....+. |+|+|+.+.             .++...+++ +||.+.|++      ||+++
T Consensus       327 ~~~~l~~~l~-~~~~~~~~-~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~iRi~~~  402 (426)
T 1sff_A          327 LGQKLKDGLL-AIAEKHPE-IGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARD-KGLILLSCGPYYNVLRILVP  402 (426)
T ss_dssp             HHHHHHHHHH-HHHHTCTT-EEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHH-TTEECEEESTTSCEEEECCC
T ss_pred             HHHHHHHHHH-HHHHhCCC-eEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHH-CCcEEecCCCCCCEEEEECC
Confidence            6666666665 432  111 2223344 677776541             234556655 699998863      99876


Q ss_pred             -CCCcccHHHHHHHHHHHhhhc
Q 015283          389 -GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       389 -~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       ..+++++++++++|+++++++
T Consensus       403 ~~~~~~~i~~~~~~l~~~l~~~  424 (426)
T 1sff_A          403 LTIEDAQIRQGLEIISQCFDEA  424 (426)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHH
Confidence             458999999999999998754

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.96  E-value=5e-29  Score=233.88  Aligned_cols=322  Identities=14%  Similarity=0.038  Sum_probs=210.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .+|+|+.+.+      +++++.+++++.+....  ...|.+..+..++|+++++++..        +++++  ++||+++
T Consensus         4 ~~i~~~~~~~------~~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g~--------~~~~~--~~~gt~a   65 (347)
T 1jg8_A            4 MMIDLRSDTV------TKPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFGK--------EAALF--VPSGTMG   65 (347)
T ss_dssp             -CEECSCGGG------CCCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHH
T ss_pred             eEEEeccccC------CCCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhCC--------ceEEE--ecCcHHH
Confidence            4688988876      33368898888765422  24677788899999999999632        34566  7888998


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCcch-h--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCC
Q 015283          115 LRLAAALIERYFPGAKVLISSPTWGNH-K--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGC  188 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~  188 (410)
                      +.++  +...+.+||+|++++|+|... .  ..+...|++++.+ .  .+++.+|++++++.+++.   .++++++++++
T Consensus        66 ~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~--~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~  140 (347)
T 1jg8_A           66 NQVS--IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-P--GKNGAMDPDDVRKAIRPRNIHFPRTSLIAIEN  140 (347)
T ss_dssp             HHHH--HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-C--EETTEECHHHHHHHSCCSCTTSCCEEEEEEES
T ss_pred             HHHH--HHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-c--CCCCccCHHHHHHHhccccccccCceEEEEec
Confidence            8876  344467999999999998653 3  2566788888777 3  234568999999988641   12578888899


Q ss_pred             CCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCCCC--CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283          189 AHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA--SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       189 p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      |+||| |.+++.+++++|+++|++||+++|+|++|..+.  +.+  .   ....+....+  .++.|+||.++.+   +|
T Consensus       141 ~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~--~---~~~~~~~~~d--~~~~s~sK~l~~~---~G  210 (347)
T 1jg8_A          141 THNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASG--V---PVKEYAGYAD--SVMFCLSKGLCAP---VG  210 (347)
T ss_dssp             SBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHC--C---CHHHHHHTCS--EEEEESSSTTCCS---SC
T ss_pred             cccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcC--C---ChHHhccccc--EEEEecccccCCC---ce
Confidence            99999 999999999999999999999999999864211  100  1   1112222223  3345899998743   67


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |+  ++.++++++++....... .. ....+.+.+.++...|+..         .+..+ +..++++.+.+.|+ +++. 
T Consensus       211 ~~--~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~---------~~~~~-~~~~~~~~l~~~L~-~~~~-  274 (347)
T 1jg8_A          211 SV--VVGDRDFIERARKARKML-GG-GMRQAGVLAAAGIIALTKM---------VDRLK-EDHENARFLALKLK-EIGY-  274 (347)
T ss_dssp             EE--EEECHHHHHHHHHHHHHH-TC-CCSSTHHHHHHHHHHHHHS---------STTHH-HHHHHHHHHHHHHH-HHTC-
T ss_pred             EE--EEcCHHHHHHHHHHHHHc-CC-chhHHHHHHHHHHHHHHHH---------HHHHH-HHHHHHHHHHHHHH-hcCc-
Confidence            54  334777666654422211 11 1122333333333333211         01111 22346677788887 6652 


Q ss_pred             CCccc-ccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          346 KDWSF-ILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~~~-~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                         .+ ..+..+.|+|+.+     +. ++.+++.+ +||.+.+++    |+++. ..+++++++++++|+++++++
T Consensus       275 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~  346 (347)
T 1jg8_A          275 ---SVNPEDVKTNMVILRTDNLKVNAHGFIEALRN-SGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  346 (347)
T ss_dssp             ---BCCGGGCCSSEEEEECTTSSSCHHHHHHHHHH-HTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ---eeccCCCcceEEEEEcccccCCHHHHHHHHHH-CCCEEecCCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence               32 2233455666533     23 44566654 699998764    99874 458999999999999998764

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.96  E-value=7.7e-29  Score=235.14  Aligned_cols=324  Identities=12%  Similarity=0.069  Sum_probs=218.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|++.|.+-...++  .++.+.+++.+.+...  ....| +..+..++++++++++    |.   ++++++  ++||
T Consensus        28 ~~~ld~~~~~~~~~~g~--~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~---~~~v~~--~~g~   95 (375)
T 2eh6_A           28 KEYLDFVSGIGVNSLGH--AYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT---EGKVFF--ANSG   95 (375)
T ss_dssp             CEEEESSHHHHTCTTCB--SCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS---CEEEEE--ESSH
T ss_pred             CEEEEcCCcccccccCC--CCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC---CCeEEE--eCch
Confidence            46789999886212232  3688888888776431  12357 5567889999999985    22   378988  9999


Q ss_pred             hhHHHHHHHHHH-Hh---CCC-CEEEEcCCCCcchhhhhhhCCCCcc----ceeeecCCCcc----cChhhHHHHHhcCC
Q 015283          112 TGSLRLAAALIE-RY---FPG-AKVLISSPTWGNHKNIFNDARVPWS----EYRYYDPKTVG----LDFEGMIADIKAAP  178 (410)
Q Consensus       112 t~a~~~~~~~~~-~~---~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~----~v~~~~~~~~~----~d~~~l~~~i~~~~  178 (410)
                      ++++.++...+. ..   .+| |+|++++|+|..+...+...+....    ..++.  .+..    .|++++++.+++  
T Consensus        96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~--  171 (375)
T 2eh6_A           96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLV--PGFSYAKLNDIDSVYKLLDE--  171 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCC--SSEEEECTTCHHHHHTTCCT--
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCC--CCceeCCCchHHHHHHHhcC--
Confidence            999999865432 23   678 9999999999988765544332221    11111  1111    488888887764  


Q ss_pred             CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       +++++++++|+||||.+ .+.+++++|.++|++||+++|+||+|.+++..+   ....+..+ +...+++   ||||.+
T Consensus       172 -~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~-~~~~d~~---s~SK~~  243 (375)
T 2eh6_A          172 -ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG---EFYAYQHF-NLKPDVI---ALAKGL  243 (375)
T ss_dssp             -TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGGG-TCCCSEE---EECGGG
T ss_pred             -CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC---cchhhhhc-CCCCCEE---EEcccc
Confidence             67778888899999998 568889999999999999999999999876432   11122111 1123433   888999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  337 (410)
                      + +|+|+||+++   +++++++    +.........+++.+.+.++...|+..          .+.+++++++++++.+.
T Consensus       244 ~-~g~~~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~l~~~  305 (375)
T 2eh6_A          244 G-GGVPIGAILA---REEVAQS----FTPGSHGSTFGGNPLACRAGTVVVDEV----------EKLLPHVREVGNYFKEK  305 (375)
T ss_dssp             G-TTSCCEEEEE---EHHHHTT----CCTTSCCCSSTTCHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH
T ss_pred             c-CCCCeEEEEE---cHHHHhh----hcCCCCCCCCCCCHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH
Confidence            9 6999999855   5564333    222111122244566666554444321          25667788888999999


Q ss_pred             hhhccCCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHh
Q 015283          338 LSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       338 l~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l  406 (410)
                      |+ +++.    ... +..+.|+|+.+   ..++.+.+.+ +||.+.+++    ||+++ ..+++++++++++|++++
T Consensus       306 L~-~~~~----~~~-~~~g~~~~~~~~~~~~~~~~~l~~-~gi~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l  375 (375)
T 2eh6_A          306 LK-ELGK----GKV-KGRGLMLGLELERECKDYVLKALE-KGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL  375 (375)
T ss_dssp             HH-HTTS----SEE-EEETTEEEEECSSCCHHHHHHHHH-TTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred             HH-HHhc----CCc-eEEEEEEEEEEcCcHHHHHHHHHH-CCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence            98 7752    222 33466777654   3456667765 699998753    99876 358999999999998864

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.96  E-value=1.5e-28  Score=237.36  Aligned_cols=326  Identities=11%  Similarity=0.021  Sum_probs=221.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-C-CCccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      ...|||+.|.++   +.. .++.+.+++.+.+.. + ....|..    .....++++.+++++. .      + +.++  
T Consensus        64 ~~~id~~~~~~l---g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g-~------~-~~i~--  129 (427)
T 2w8t_A           64 KDTILLGTYNYM---GMT-FDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG-T------T-GAIV--  129 (427)
T ss_dssp             EEEEECSCCCTT---CGG-GCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT-C------S-EEEE--
T ss_pred             ceEEEEECcccc---cCC-CCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC-C------C-ceEE--
Confidence            467899988642   322 267888888776643 2 1122322    3345889999999962 2      2 3444  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC-CcEEEEe
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG-GSFILLH  186 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~~ii~  186 (410)
                      +++|++++..+..  ..+.+||.|+++.|+|..+...++..|.+++.++.       .|++.+++.+++.++ +++++++
T Consensus       130 ~~sGs~a~~~al~--~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~  200 (427)
T 2w8t_A          130 FSTGYMANLGIIS--TLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVL  200 (427)
T ss_dssp             ESCHHHHHHHHHH--HHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEE
T ss_pred             ecCcHHHHHHHHH--HhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence            5778888887633  34679999999999999999999999988887764       589999999976433 5788888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      ++++||||.+.+   +++|.++|++||+++|+||+|..+.++....   ++....+ ..+.+++++|+||.+|++|   |
T Consensus       201 ~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~---~~~~~~~~~~~~di~~~s~sK~~g~~g---G  271 (427)
T 2w8t_A          201 EGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGR---GVYEAQGLEGQIDFVVGTFSKSVGTVG---G  271 (427)
T ss_dssp             ESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSC---CHHHHTTCTTCCSEEEEESSSTTCSCC---E
T ss_pred             cCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC---chHhhcCCCcCCcEEEecchhhhccCC---C
Confidence            999999999887   7788888999999999999999877542111   2222222 2245899999999998776   9


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      |+++   ++++++.+.........  ...++...+.++...|+..       ++.++.+++++++++++.+.|+ ++|  
T Consensus       272 ~v~~---~~~l~~~l~~~~~~~~~--~~~~~~~~~aa~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~g--  336 (427)
T 2w8t_A          272 FVVS---NHPKFEAVRLACRPYIF--TASLPPSVVATATTSIRKL-------MTAHEKRERLWSNARALHGGLK-AMG--  336 (427)
T ss_dssp             EEEE---CCTTGGGGGGTCHHHHS--SCCCCHHHHHHHHHHHHHH-------TSCHHHHHHHHHHHHHHHHHHH-HHT--
T ss_pred             EEEe---CHHHHHHHHHhcccccc--cCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHH-HcC--
Confidence            9754   67765554332111111  1223333333333333211       1125778889999999999998 776  


Q ss_pred             CCcccc-cCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          346 KDWSFI-LRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       346 ~~~~~~-~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                        +.+. ++..+.++|+.+.     .++...+++ .||.+.++         +  ||+++. .+++++++++++|+++++
T Consensus       337 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~  413 (427)
T 2w8t_A          337 --FRLGTETCDSAIVAVMLEDQEQAAMMWQALLD-GGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGR  413 (427)
T ss_dssp             --CEESCSSCCSSEEEEEESSHHHHHHHHHHHHH-TTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             --CcccCCCCCCCEEEEEECCHHHHHHHHHHHHH-CCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence              3444 3313456665442     234566666 49998764         2  888875 489999999999999986


Q ss_pred             hc
Q 015283          408 NV  409 (410)
Q Consensus       408 ~~  409 (410)
                      ++
T Consensus       414 ~~  415 (427)
T 2w8t_A          414 AV  415 (427)
T ss_dssp             HH
T ss_pred             Hh
Confidence            53

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.96  E-value=7.2e-28  Score=230.62  Aligned_cols=329  Identities=15%  Similarity=0.056  Sum_probs=217.4

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      +.+++..+.+   .+.++ +|.+.+++.+.+.. ..     ...|+...+..++|+++++++..       +++|++  +
T Consensus        47 ~~i~~~~~~~---~~~~~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~~i~~--~  113 (401)
T 2bwn_A           47 DITVWCGNDY---LGMGQ-HPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-------EAALVF--S  113 (401)
T ss_dssp             EEEECSCSCT---TSGGG-CHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-------SEEEEE--S
T ss_pred             cEEEeeCCCc---ccCCC-CHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------CcEEEE--C
Confidence            3566665443   13323 56788888877643 11     12355567889999999999632       467777  6


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEeC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHG  187 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~  187 (410)
                      +|++ ++..+..++....+||.|+++.|+|+.+...++..|++++.++.   +    |++++++.+.... +++++++++
T Consensus       114 sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~---~----d~~~le~~l~~~~~~~~~~v~~~  185 (401)
T 2bwn_A          114 SAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH---N----DVAHLRELIAADDPAAPKLIAFE  185 (401)
T ss_dssp             CHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT---T----CHHHHHHHHHHSCTTSCEEEEEE
T ss_pred             CcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcC---C----CHHHHHHHHHhhccCCceEEEEe
Confidence            5555 66665433333469999999999999999999999999988876   1    6788888887432 367888889


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcce
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      +|+||||.+++   +++|+++|++||+++|+||+|....+++...   ++....+. ...+++++|+||.++++|   ||
T Consensus       186 ~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~---~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~  256 (401)
T 2bwn_A          186 SVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGA---GVAERDGLMHRIDIFNGTLAKAYGVFG---GY  256 (401)
T ss_dssp             SBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSC---CHHHHHTCGGGCSEEEEESSSTTCSCC---EE
T ss_pred             cCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCc---eeeeccCccccCcEEEeechhhccCCC---CE
Confidence            99999999887   6788888999999999999998544321111   11111111 124788999999999887   99


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~  346 (410)
                      ++.   ++++++.+.........  ....+..++.++...++...     ...+++.+++++++++++.+.|+ ++|   
T Consensus       257 ~~~---~~~~~~~l~~~~~~~~~--~~~~~~~~~~a~~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~-~~g---  322 (401)
T 2bwn_A          257 IAA---SARMVDAVRSYAPGFIF--STSLPPAIAAGAQASIAFLK-----TAEGQKLRDAQQMHAKVLKMRLK-ALG---  322 (401)
T ss_dssp             EEE---CHHHHHHHHHHCHHHHT--SBCCCHHHHHHHHHHHHHHT-----SHHHHHHHHHHHHHHHHHHHHHH-HHT---
T ss_pred             Eec---CHHHHHHHHHhCcCcee--cCCCCHHHHHHHHHHHHHHH-----hcccHHHHHHHHHHHHHHHHHHH-HCC---
Confidence            754   77766655432111111  12233344444433332110     01135777888999999999998 776   


Q ss_pred             CcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          347 DWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                       +.+..+.++ ++|+.+.     .++...+++++||.+.|+       |    |++++. .+++++++++++|+++++++
T Consensus       323 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~  400 (401)
T 2bwn_A          323 -MPIIDHGSH-IVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC  400 (401)
T ss_dssp             -CCBCCCSSS-CEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred             -CcccCCCCC-eEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence             355555554 5555442     234556655579998642       2    898873 48899999999999998754

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.96  E-value=3.6e-29  Score=238.84  Aligned_cols=323  Identities=11%  Similarity=0.048  Sum_probs=212.0

Q ss_pred             ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-------
Q 015283           53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-------  125 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-------  125 (410)
                      +++.+.+++.+.+.... ..+....+..++++++++++.+..+.  ++++|++  ++||++++..+...+...       
T Consensus        42 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~i~~--~~ggt~a~~~~~~~~~~~~~~~~~~  116 (397)
T 3f9t_A           42 VLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLNN--KDAYGHI--VSGGTEANLMALRCIKNIWREKRRK  116 (397)
T ss_dssp             CCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTTC--TTCEEEE--ESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCC--CCCCEEE--ecCcHHHHHHHHHHHHHHHHhhhhh
Confidence            36888999888775432 22222224455555555554444443  3678888  999999999985554332       


Q ss_pred             ----CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283          126 ----FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ  201 (410)
Q Consensus       126 ----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~  201 (410)
                          .+||+|+++.|+|..+...++..|.+++.++.  .+++.+|++.+++.+.+.  ++.++++++|+||||.+.+   
T Consensus       117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~---  189 (397)
T 3f9t_A          117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPI--KEDYTIDEKFVKDAVEDY--DVDGIIGIAGTTELGTIDN---  189 (397)
T ss_dssp             TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECB--CTTSSBCHHHHHHHHHHS--CCCEEEEEBSCTTTCCBCC---
T ss_pred             cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEee--CCCCcCCHHHHHHHHhhc--CCeEEEEECCCCCCCCCCC---
Confidence                14999999999999999999999999999988  345788999999999752  4566677889999999765   


Q ss_pred             HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh-----HHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh
Q 015283          202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV-----RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL  276 (410)
Q Consensus       202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~  276 (410)
                      +++|.++|++||+++|+||+|.++..+.. .....+     ...... +.++++.|++|.++ +|.|+||+  +++++.+
T Consensus       190 l~~i~~l~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~--~~~~~~~  264 (397)
T 3f9t_A          190 IEELSKIAKENNIYIHVDAAFGGLVIPFL-DDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGI--LFKDIGY  264 (397)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTGGGTGGGC-CGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEE--EESSGGG
T ss_pred             HHHHHHHHHHhCCeEEEEccccchhhhhc-ccccccccccccccccc-cCCeEEEccccccC-CCCCceEE--EEeCHHH
Confidence            67788889999999999999987553211 100000     000112 45688899999875 67899998  4555553


Q ss_pred             HHHHHHHHHhhccC--------cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          277 AARVKSQLKRLARP--------MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       277 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                      .+.+... ......        +....+..++.++...+.        ...+++..++++++++++.+.|+ ++++    
T Consensus       265 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--------~~~~~~~~~~~~~~~~~l~~~L~-~~g~----  330 (397)
T 3f9t_A          265 KRYLDVD-APYLTETRQATILGTRVGFGGACTYAVLRYLG--------REGQRKIVNECMENTLYLYKKLK-ENNF----  330 (397)
T ss_dssp             GGGTCEE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-HTTC----
T ss_pred             HHhhccC-CccccCCCccccccccccchHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHH-HCCC----
Confidence            3222110 101000        000112233333433332        22346777888899999999998 7763    


Q ss_pred             ccccCCcceeeecCC-CH-HHHHHhhhcCcEEEcCCC-----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          349 SFILRQIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG-----RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       349 ~~~~~~~~~~~~~~~-~~-~~~~~ll~~~gi~v~~~g-----Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      ....+..+.++++.. .. ++.+.+.+ +||.+.+++     ||+++. .+++++++++++|+++++
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          331 KPVIEPILNIVAIEDEDYKEVCKKLRD-RGIYVSVCNCVKALRIVVMPHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             CBSSCCSSSEEEEECTTHHHHHHHHHH-TTCBCEECSSSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred             EEEcCCCccEEEEEeCCHHHHHHHHHh-CCeEEeccCCCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence            433333344545443 33 44556655 599998874     999874 488999999999999875

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.96  E-value=1.8e-28  Score=233.04  Aligned_cols=318  Identities=15%  Similarity=0.049  Sum_probs=216.2

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      ++.++++.+.+++.+.+...  ..+.......++++.+++++...    .+.+++++  ++||++++. +  +...+.+|
T Consensus         9 gp~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~----~~~~~v~~--~~g~t~al~-~--~~~~~~~g   77 (384)
T 3zrp_A            9 GPTTIKEDVLVAGLENNVGF--TSKEFVEALAYSLKGLRYVMGAS----KNYQPLII--PGGGTSAME-S--VTSLLKPN   77 (384)
T ss_dssp             SCSCCCHHHHHHTTCCSCCT--TSHHHHHHHHHHHHHHHHHHTCC----TTSEEEEE--ESCHHHHHH-H--GGGGCCTT
T ss_pred             CCCCCCHHHHHHhhcccccc--ccHHHHHHHHHHHHHHHHHhCCC----CCCcEEEE--cCCcHHHHH-H--HHhhcCCC
Confidence            44445789998887755321  11222445678888898886432    11277988  999999999 7  34447799


Q ss_pred             CEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          129 AKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       129 d~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      |+|++++|+|.+  +...++..|.+++.+++.  .++.+|++.+++.+.+  .+++++++++|+||||.+++   +++|.
T Consensus        78 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~  150 (384)
T 3zrp_A           78 DKILVVSNGVFGDRWEQIFKRYPVNVKVLRPS--PGDYVKPGEVEEEVRK--SEYKLVALTHVETSTGVREP---VKDVI  150 (384)
T ss_dssp             CEEEEECSSHHHHHHHHHHTTSSCEEEEECCS--TTCCCCHHHHHHHHHH--SCEEEEEEESEETTTTEECC---HHHHH
T ss_pred             CEEEEecCCcchHHHHHHHHHcCCcEEEecCC--CCCCCCHHHHHHHHHh--CCCcEEEEeCCCCCCceECc---HHHHH
Confidence            999999999955  566677889999999873  4567899999999986  25778888999999999887   66788


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH------
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV------  280 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~------  280 (410)
                      ++|++||+++|+|++|...... .+         ....+.++++.|+||.++ ++.++||+++   ++++++++      
T Consensus       151 ~l~~~~~~~li~D~a~~~~~~~-~~---------~~~~~~d~~~~s~~K~~~-~~~g~g~~~~---~~~~~~~~~~~~~~  216 (384)
T 3zrp_A          151 NKIRKYVELIVVDGVSSVGAEE-VK---------AEEWNVDVYLTASQKALG-SAAGLGLLLL---SPKALSILDSQNSI  216 (384)
T ss_dssp             HHHGGGEEEEEEECTTTTTTSC-CC---------TTTTTCSEEEEETTSTTC-CCSSEEEEEE---CHHHHHHHHHCCCS
T ss_pred             HHHHhcCCEEEEECcccccCcc-cc---------ccccCCCEEEecCccccc-CCCceEEEEE---CHHHHHHhcCCCCC
Confidence            8899999999999997643321 11         112236788999999885 2344799865   77776665      


Q ss_pred             -------HHHHHhhc-----cCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283          281 -------KSQLKRLA-----RPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD  347 (410)
Q Consensus       281 -------~~~~~~~~-----~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~  347 (410)
                             ........     ..... +++...+.++...+...     ....+++.+++++++++++.+.|+ +++    
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g----  286 (384)
T 3zrp_A          217 AGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLI-----EKEGIENRIKRHTMVASAIRAGLE-ALG----  286 (384)
T ss_dssp             CCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HTT----
T ss_pred             CcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHHHH-HCC----
Confidence                   22111111     11112 33433333333333211     012256888899999999999998 776    


Q ss_pred             cccccCC----cceeeecC---CCHH-HHHHhhhcCcEEEcCCC-------eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          348 WSFILRQ----IGMFSFTG---LNKA-QSDNMTNKWHVYMTKDG-------RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       348 ~~~~~~~----~~~~~~~~---~~~~-~~~~ll~~~gi~v~~~g-------Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.+..+.    .+.+.++.   .+.+ +.+.+.+ +||.+.++.       ||++.. .+++++++++++|+++++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~  363 (384)
T 3zrp_A          287 LEIVARRPESYSNTVTGVILKVADPQKVLAGTVN-EGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRKL  363 (384)
T ss_dssp             CCBSCSSGGGBCSSEEEEECSSSCHHHHHHHHHT-TTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEccCcccccCccEEEEECCCCCHHHHHHHHHH-CCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHHc
Confidence            3444443    34454443   3444 4556655 599998764       999663 48899999999999998753

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.96  E-value=1.4e-28  Score=234.71  Aligned_cols=322  Identities=11%  Similarity=-0.020  Sum_probs=215.4

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE  123 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~  123 (410)
                      ++|..+..++++.+.+++.+.+.. + ..+....+..++|+++++++..      +++++++  |+||++++.++...+ 
T Consensus        11 yl~~~~~~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--t~g~t~a~~~~~~~~-   79 (392)
T 2z9v_A           11 ITLTAGPVNAYPEVLRGLGRTVLY-D-YDPAFQLLYEKVVDKAQKAMRL------SNKPVIL--HGEPVLGLEAAAASL-   79 (392)
T ss_dssp             EECSSSCCCCCHHHHHHTTSCCCC-T-TSHHHHHHHHHHHHHHHHHTTC------SSCCEEE--SSCTHHHHHHHHHHH-
T ss_pred             eeecCCCcCCCHHHHHHHhccccc-c-ccHHHHHHHHHHHHHHHHHhCC------CCCEEEE--eCCchHHHHHHHHHh-
Confidence            344445555689999988776643 1 2222344678999999999632      2578999  999999999984433 


Q ss_pred             HhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283          124 RYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ  201 (410)
Q Consensus       124 ~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~  201 (410)
                       +.+||+|++++|+|.++  ...++..|.+++.+++.  .++.+|++.+++.+++. ++++++++++|+||||.+++   
T Consensus        80 -~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~---  152 (392)
T 2z9v_A           80 -ISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVP--YNEAIDPQAVADMLKAH-PEITVVSVCHHDTPSGTINP---  152 (392)
T ss_dssp             -CCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECC--TTSCCCHHHHHHHHHHC-TTCCEEEEESEEGGGTEECC---
T ss_pred             -cCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCC--CCCCCCHHHHHHHHhcC-CCCcEEEEeccCCCCceecc---
Confidence             77999999999999875  34445679999999873  34568999999999642 24567777999999999887   


Q ss_pred             HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHH
Q 015283          202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      +++|.++|++||+++|+|++|....   ...   .+    ...+.+++++|+||.+ +++|  +||+++   ++++++++
T Consensus       153 l~~i~~l~~~~~~~li~D~a~~~g~---~~~---~~----~~~~~d~~~~s~sK~~~~~~g--~G~l~~---~~~~~~~l  217 (392)
T 2z9v_A          153 IDAIGALVSAHGAYLIVDAVSSFGG---MKT---HP----EDCKADIYVTGPNKCLGAPPG--LTMMGV---SERAWAKM  217 (392)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTBTT---BSC---CG----GGGTCSEEEECSSSTTCCCSC--CEEEEE---CHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEEcccccCC---ccc---cc----ccccceEEEecCcccccCCCc--eeEEEE---CHHHHHHh
Confidence            5688888999999999999976322   111   11    1113568899999965 4455  499865   77755554


Q ss_pred             HHHH--------------Hhh-ccCccc-CCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccC
Q 015283          281 KSQL--------------KRL-ARPMYS-NPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       281 ~~~~--------------~~~-~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ....              ... ...... +++..++.++...++.      +.+. +++.+++++++++++.+.|+ ++|
T Consensus       218 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~~~~~l~~~L~-~~g  290 (392)
T 2z9v_A          218 KANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDL------YLNEGPEAVWARHALTAKAMRAGVT-AMG  290 (392)
T ss_dssp             HTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             hhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH------HHhccHHHHHHHHHHHHHHHHHHHH-HcC
Confidence            3210              000 001112 3333333333333321      1223 56788899999999999998 775


Q ss_pred             CCCCccccc-CC---cceeeecC----CCHH-HHHHhhhcCcEEEcCC------C--eEEe-c-CCCcccHHHHHHHHHH
Q 015283          344 SGKDWSFIL-RQ---IGMFSFTG----LNKA-QSDNMTNKWHVYMTKD------G--RISL-A-GLSLAKCEYLADAIID  404 (410)
Q Consensus       344 ~~~~~~~~~-~~---~~~~~~~~----~~~~-~~~~ll~~~gi~v~~~------g--Ris~-~-~~~~~~i~~~~~~l~~  404 (410)
                          +.+.. +.   .+.++++.    .+.. +.++|.+++||.+.++      +  ||++ + ..+++++++++++|++
T Consensus       291 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~  366 (392)
T 2z9v_A          291 ----LSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGG  366 (392)
T ss_dssp             ----CCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             ----CeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHH
Confidence                34433 21   34444442    3443 4556665459999875      2  9994 5 4699999999999999


Q ss_pred             Hhhhc
Q 015283          405 SYHNV  409 (410)
Q Consensus       405 ~l~~~  409 (410)
                      +++++
T Consensus       367 ~~~~~  371 (392)
T 2z9v_A          367 AMNAA  371 (392)
T ss_dssp             HHHHT
T ss_pred             HHHHc
Confidence            98754

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.96  E-value=8e-29  Score=232.81  Aligned_cols=311  Identities=14%  Similarity=0.031  Sum_probs=210.3

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      +..++++.+.+++.+.+...  ..|....+..++|+++++++...      ++++++  ++||++++.++..  ..+.+|
T Consensus         8 ~p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g~~------~~~i~~--~~g~t~a~~~~~~--~~~~~g   75 (352)
T 1iug_A            8 GPVRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAFRTE------GEVLIL--TGSGTLAMEALVK--NLFAPG   75 (352)
T ss_dssp             SSCCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHHTCS------SEEEEE--ESCHHHHHHHHHH--HHCCTT
T ss_pred             CCCCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHhCCC------CceEEE--cCchHHHHHHHHH--hccCCC
Confidence            33445799999998876421  22222346789999999997432      578888  9999999999843  336799


Q ss_pred             CEEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          129 AKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       129 d~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      |+|++++|+|.++.  ..++..|.+++.+++.  .++.+|++++++   +   +++++++++|+||||.+.+   +++|.
T Consensus        76 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~---~---~~~~v~~~~~~nptG~~~~---l~~i~  144 (352)
T 1iug_A           76 ERVLVPVYGKFSERFYEIALEAGLVVERLDYP--YGDTPRPEDVAK---E---GYAGLLLVHSETSTGALAD---LPALA  144 (352)
T ss_dssp             CEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCTTTSCC---S---SCSEEEEESEETTTTEECC---HHHHH
T ss_pred             CeEEEEeCCchhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHhc---c---CCcEEEEEEecCCcceecC---HHHHH
Confidence            99999999999875  4456689999999873  345688888866   2   4556777999999999887   56888


Q ss_pred             HHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc-ccccCCCcceEEEEeCCchhHHH----
Q 015283          207 DVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-LGLYAERIGAMNVVCSSSDLAAR----  279 (410)
Q Consensus       207 ~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G~r~G~l~~~~~~~~~~~~----  279 (410)
                      ++|++|  |+++|+|++|.. +..  ..   .+    ...+.+++++|+||. ++++|  +||+++   +++.+++    
T Consensus       145 ~l~~~~~~~~~li~D~a~~~-~~~--~~---~~----~~~~~d~~~~s~~K~~~~~~g--~G~~~~---~~~~~~~~~~~  209 (352)
T 1iug_A          145 RAFKEKNPEGLVGADMVTSL-LVG--EV---AL----EAMGVDAAASGSQKGLMCPPG--LGFVAL---SPRALERLKPR  209 (352)
T ss_dssp             HHHHHHCTTCEEEEECTTTB-TTB--CC---CS----GGGTCSEEEEESSSTTCCCSC--EEEEEE---CHHHHHTCCCC
T ss_pred             HHHHhhCCCCEEEEECCccc-cCc--ce---ec----cccCeeEEEecCcccccCCCc--eeEEEE---CHHHHHHhhCC
Confidence            889999  999999999762 211  11   11    111356789999995 44444  699855   6665544    


Q ss_pred             -----HHHHHHhhc-cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          280 -----VKSQLKRLA-RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       280 -----~~~~~~~~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                           +........ .....+++...+.++...++..      .+++++.+++++++++++.+.|+ ++|    +.+..+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~  278 (352)
T 1iug_A          210 GYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEV------LPRLEEHLALKAWQNALLYGVGE-EGG----LRPVPK  278 (352)
T ss_dssp             SSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH------GGGHHHHHHHHHHHHHHHHHHHH-HTT----CEESCS
T ss_pred             CceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Cccccc
Confidence                 222111111 1122244444444443333321      11246788889999999999998 775    354444


Q ss_pred             C-cceeeecC----CCHH-HHHHhhhcCcEEEcCC------C--eEEecCC-CcccHHHHHHHHHHHhhhc
Q 015283          354 Q-IGMFSFTG----LNKA-QSDNMTNKWHVYMTKD------G--RISLAGL-SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       354 ~-~~~~~~~~----~~~~-~~~~ll~~~gi~v~~~------g--Ris~~~~-~~~~i~~~~~~l~~~l~~~  409 (410)
                      . .+.++|+.    .+.+ +.+++.+ +||.+.++      +  ||+++.. +++++++++++|+++++++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  348 (352)
T 1iug_A          279 RFSPAVAAFYLPEGVPYARVKEAFAQ-RGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  348 (352)
T ss_dssp             SBCTTCEEEECCTTCCHHHHHHHHHT-TTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEcCCCCCHHHHHHHHHH-CCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence            3 45555543    3444 4556655 59999875      2  9998753 6899999999999988754

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.96  E-value=3.8e-28  Score=234.69  Aligned_cols=346  Identities=12%  Similarity=0.044  Sum_probs=201.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|.+....|+.  +|.+.+++.+.+...  ..|.+..+..+.++++++++....+  .+.++|++  ++||++
T Consensus        29 ~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~--~~gg~e  100 (430)
T 3i4j_A           29 RRYLDGSSGALVANIGHG--RAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWA--VSGGSE  100 (430)
T ss_dssp             CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEE--ESSHHH
T ss_pred             CEEEECCCchhccccCCC--CHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCcHHH
Confidence            467899988653455543  688999888877542  2232333444555555555444333  23578999  999999


Q ss_pred             HHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCCC---------------CccceeeecCCC---cccChhh
Q 015283          114 SLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARV---------------PWSEYRYYDPKT---VGLDFEG  169 (410)
Q Consensus       114 a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~~~---~~~d~~~  169 (410)
                      ++..+++++...      .++|.|++.+|+|.++.......+.               .+..++.  .+.   ...|++.
T Consensus       101 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  178 (430)
T 3i4j_A          101 ATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPK--PDPARNGAEDAEG  178 (430)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECC--CCTTSCHHHHHTH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCC--CcccchhhHHHHH
Confidence            999986665443      4578999999999887654443332               2222332  111   2236688


Q ss_pred             HHHHHhcCC-CCcEEEEeCCCCC-CCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          170 MIADIKAAP-GGSFILLHGCAHN-PTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       170 l~~~i~~~~-~~~~~ii~~~p~N-PtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      +++.+++.+ +.+.++++++++| ++|. +++.+++++|.++|++||+++|+||+|.+|+..+   ..+....+.+..++
T Consensus       179 le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g---~~~~~~~~~~~~~d  255 (430)
T 3i4j_A          179 LRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCG---SPLALSRWSGVTPD  255 (430)
T ss_dssp             HHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGGTTTCCCS
T ss_pred             HHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhhhhcCCCCc
Confidence            888887422 3556666666677 8886 6678889999999999999999999999887532   12222111022223


Q ss_pred             EEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      ++   +|||.++ +| +|+||+++   ++++++.+...........+.+.+.+++.++...|+..+-    .+..++.++
T Consensus       256 i~---t~sK~l~-~G~~r~G~~~~---~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~  324 (430)
T 3i4j_A          256 IA---VLGKGLA-AGYAPLAGLLA---APQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER----EDLTGAAKE  324 (430)
T ss_dssp             EE---EECGGGT-TTSSCCEEEEE---CHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH----TTHHHHHHH
T ss_pred             EE---EEccccc-CCccccEEEEE---CHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc----ccHHHHHHH
Confidence            33   6899999 59 99999855   8886555443210012222335666777766655542110    111223333


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-C-------------HHHHHHhhhcCcEEEcCC--------C
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-N-------------KAQSDNMTNKWHVYMTKD--------G  383 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~ll~~~gi~v~~~--------g  383 (410)
                      ..+..++.+.+.+. .++.   +....+. |.|.++.+ +             .++.+.+++ +||.+.|+        +
T Consensus       325 ~~~~~~~~l~~~~~-~~~~---~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~~~~  398 (430)
T 3i4j_A          325 RGAQLLAGLQALQA-RFPQ---MMQVRGT-GLLLGVVLGDLATGQAFETPGIASRIGAAALK-RGLITYPGSGAEPNGRG  398 (430)
T ss_dssp             HHHHHHHHHHHHHH-HCTT---EEEEEEE-TTEEEEEEC------------CHHHHHHHHHH-TTEECC-----------
T ss_pred             HHHHHHHHHHHHHH-hCCC---eEEEEEE-EEEEEEEeccccccCCCccHHHHHHHHHHHHh-CCCEEEecccccCCCCC
Confidence            33333444444333 3321   2333444 44544432 1             234566665 69999987        2


Q ss_pred             ---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          384 ---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 ---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                         ||+++. .+++++++++++|+++++++
T Consensus       399 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  428 (430)
T 3i4j_A          399 DHLLLGPPLSITAAEVDGLLALLAGALEDV  428 (430)
T ss_dssp             CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence               888762 48999999999999998764

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.96  E-value=1.3e-28  Score=236.17  Aligned_cols=332  Identities=13%  Similarity=0.061  Sum_probs=214.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.+.+..|+.  +|.+.+++.+.+....  ...| +.....++++.+++++    +    .+++++  ++||
T Consensus        39 ~~~lD~~~~~~~~~lg~~--~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~----~~~v~~--~~gg  105 (406)
T 4adb_A           39 KEYIDFAGGIAVNALGHA--HPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFF--CNSG  105 (406)
T ss_dssp             CEEEESSHHHHTCTTCBT--CHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEE--ESSH
T ss_pred             CEEEECCCchhhcccCCC--CHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC----C----CCeEEE--eCcH
Confidence            467899988543344543  6889999888775421  1223 3445667777777774    2    358888  9999


Q ss_pred             hhHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchhhhhhhCCCCccc----eeeecCCCcc----cChhhHHHHHhcC
Q 015283          112 TGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKNIFNDARVPWSE----YRYYDPKTVG----LDFEGMIADIKAA  177 (410)
Q Consensus       112 t~a~~~~~~~~~~~-----~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~----~d~~~l~~~i~~~  177 (410)
                      ++++.++..++...     .+| |+|++++|+|.++.......+.+...    .+.  ..+..    .|++.+++.+.. 
T Consensus       106 ~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~l~~~l~~-  182 (406)
T 4adb_A          106 AEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPL--PADIRHAAYNDINSASALIDD-  182 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSC--CSSEEEECTTCHHHHHTTCST-
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCC--CCCceEeCCCcHHHHHHHhcC-
Confidence            99999986544322     045 99999999999886555444432211    111  01111    478888888763 


Q ss_pred             CCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283          178 PGGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK  255 (410)
Q Consensus       178 ~~~~~~ii~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  255 (410)
                        ++++++++ |+||||.++  +.+++++|.++|++||+++|+||+|.+++..+   ....... .+...+++   ||||
T Consensus       183 --~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~-~~~~~d~~---t~sK  252 (406)
T 4adb_A          183 --STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG---ELYAYMH-YGVTPDLL---TTAK  252 (406)
T ss_dssp             --TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHH-HTCCCSEE---EECG
T ss_pred             --CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhHHHHh-cCCCCCEE---Eech
Confidence              67777767 999999988  99999999999999999999999999886532   1222222 22333444   6799


Q ss_pred             cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      .++ +|+|+||+++   ++++++.    +.........+++.+++.++...|+..+.        ++.+++++++++++.
T Consensus       253 ~~~-~G~r~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--------~~~~~~~~~~~~~l~  316 (406)
T 4adb_A          253 ALG-GGFPVGALLA---TEECARV----MTVGTHGTTYGGNPLASAVAGKVLELINT--------PEMLNGVKQRHDWFV  316 (406)
T ss_dssp             GGG-TTSCCEEEEE---CHHHHHT----CCTTSSCCSSTTCHHHHHHHHHHHHHHSS--------HHHHHHHHHHHHHHH
T ss_pred             hhc-CCCCeEEEEE---cHHHHhh----hccCCcCCCCCCCHHHHHHHHHHHHHHHh--------cCHHHHHHHHHHHHH
Confidence            999 8999999755   7774443    33333333335666666666555442110        355666777777777


Q ss_pred             HHhhhccCCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHH
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAII  403 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~  403 (410)
                      +.|+ +++.........+..+.+.++.+      +. ++...+++ +||.+.+++    ||+++. .+++++++++++|+
T Consensus       317 ~~l~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~iRi~~~~~~~~e~i~~~~~~l~  394 (406)
T 4adb_A          317 ERLN-TINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAK-AGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFA  394 (406)
T ss_dssp             HHHH-HHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHH-TTEECEESSTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             HHHH-HHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHH-CCcEEeecCCCeEEEECCCCCCHHHHHHHHHHHH
Confidence            7776 54310001111122345555422      23 44566665 599999875    885432 38999999999999


Q ss_pred             HHhhhc
Q 015283          404 DSYHNV  409 (410)
Q Consensus       404 ~~l~~~  409 (410)
                      ++++++
T Consensus       395 ~~l~~~  400 (406)
T 4adb_A          395 AACEHF  400 (406)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998653

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.96  E-value=4.6e-29  Score=237.77  Aligned_cols=325  Identities=12%  Similarity=0.022  Sum_probs=217.9

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---C---ccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---N---KEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~---~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      +.++|..|.+    +  +.++.+.+++.+.+....   .   ..|+. ..+..++|+++++++..      ++++|++  
T Consensus        16 ~~i~l~~~~~----~--~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~------~~~~v~~--   81 (390)
T 1elu_A           16 NKTYFNFGGQ----G--ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNV------DPNTITI--   81 (390)
T ss_dssp             TSEECCTTTC----C--CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTS------CGGGEEE--
T ss_pred             CeEEecCCcc----C--CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCC------CHHHEEE--
Confidence            4677776653    3  336788888877764310   0   14543 36789999999999632      3578999  


Q ss_pred             cCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhh----hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283          108 GLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNI----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF  182 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~  182 (410)
                      ++||++++..+.  ... +.+||+|++++|+|..+...    ++..|.+++.+++.+++++.+|++.+++.+++   +++
T Consensus        82 ~~g~t~a~~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~  156 (390)
T 1elu_A           82 TDNVTTGCDIVL--WGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP---KTR  156 (390)
T ss_dssp             ESSHHHHHHHHH--HHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT---TEE
T ss_pred             eCChHHHHHHHH--hCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC---Cce
Confidence            999999999983  333 56999999999999997654    45679999988874335678899999988864   678


Q ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHH----HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          183 ILLHGCAHNPTGIDPTPEQWEKIADVIQ----EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~----~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      ++++++|+||||.+++   +++|.++|+    ++|+++|+||+|.....   ..   .    ......+++++|+||.+.
T Consensus       157 ~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~---~~---~----~~~~~~d~~~~s~~K~~~  223 (390)
T 1elu_A          157 LVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSL---PL---D----FSRLEVDYYAFTGHKWFA  223 (390)
T ss_dssp             EEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTB---CC---C----TTTSCCSEEEEESSSTTC
T ss_pred             EEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCc---CC---C----hhhcCCCEEEcccccccc
Confidence            8888999999999998   667777799    99999999999873221   11   1    112246788999999432


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHh------------------hccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKR------------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEM  320 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  320 (410)
                       +|.|+||+++   ++++++++......                  .......+++..++.++...++.  +.+  ..++
T Consensus       224 -~~~g~G~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--l~~--~~~~  295 (390)
T 1elu_A          224 -GPAGVGGLYI---HGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQL--HQR--QGTA  295 (390)
T ss_dssp             -CCTTCEEEEE---CTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHH--HHH--HCCH
T ss_pred             -CCCceEEEEE---CHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHH--HHH--cCCH
Confidence             4567899865   66654443221000                  00111223444444433332221  000  0125


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcc-CCCCCcccc---cCCcceeeec---CCCHH-HHHHhhhcCcEEEcCCC-----eEEe
Q 015283          321 EMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFI---LRQIGMFSFT---GLNKA-QSDNMTNKWHVYMTKDG-----RISL  387 (410)
Q Consensus       321 ~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~---~~~~~~~~~~---~~~~~-~~~~ll~~~gi~v~~~g-----Ris~  387 (410)
                      ++.+++++++++++.+.|+ ++ |    +.+.   .+.++++.|-   +.+.+ +.+++. ++||.+.+++     ||++
T Consensus       296 ~~~~~~~~~~~~~l~~~L~-~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~iRis~  369 (390)
T 1elu_A          296 EERYQAICQRSEFLWRGLN-QLPH----VHCLATSAPQAGLVSFTVDSPLGHRAIVQKLE-EQRIYLRTIADPDCIRACC  369 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HSTT----EEESCSSCCSSSEEEEEECSSSCHHHHHHHHH-HTTEECEEETTTTEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHH-hcCC----cEEecCccccccEEEEEcCCCCCHHHHHHHHH-HCCEEEEecCCCCeEEEec
Confidence            6788889999999999998 76 4    3444   3355655542   22444 455664 5699998762     9997


Q ss_pred             c-CCCcccHHHHHHHHHHH
Q 015283          388 A-GLSLAKCEYLADAIIDS  405 (410)
Q Consensus       388 ~-~~~~~~i~~~~~~l~~~  405 (410)
                      . ..+++++++++++|+++
T Consensus       370 ~~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          370 HYITDEEEINHLLARLADF  388 (390)
T ss_dssp             CTTCCHHHHHHHHHHHTTC
T ss_pred             ccCCCHHHHHHHHHHHHhh
Confidence            4 35899999999998764

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.96  E-value=6.7e-28  Score=230.12  Aligned_cols=333  Identities=11%  Similarity=0.044  Sum_probs=217.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|++.|.+....|+  .+|.+.+++.+.+... +...+.+..-..++++.+++++.        .+++++  ++||+
T Consensus        36 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~v~~--~~~gt  103 (392)
T 3ruy_A           36 NRYMDLLSAYSAVNQGH--RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--------KEMVLP--MNTGA  103 (392)
T ss_dssp             CEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--------CSEEEE--ESSHH
T ss_pred             CEEEEcCCChhhhccCC--CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--------CCEEEE--eCcHH
Confidence            46789998865223343  2689999988877542 11111234456788888888852        468888  99999


Q ss_pred             hHHHHHHHHHHHh--------CCCCEEEEcCCCCcchhhhhhhCCCC-cc---ceeeecC-CC-cccChhhHHHHHhcCC
Q 015283          113 GSLRLAAALIERY--------FPGAKVLISSPTWGNHKNIFNDARVP-WS---EYRYYDP-KT-VGLDFEGMIADIKAAP  178 (410)
Q Consensus       113 ~a~~~~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~---~v~~~~~-~~-~~~d~~~l~~~i~~~~  178 (410)
                      +++..+..++...        ..||+|+++.|+|.++.......+.. ..   ..+.... .. .-.|++.+++.++.  
T Consensus       104 ~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--  181 (392)
T 3ruy_A          104 EAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITP--  181 (392)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCT--
T ss_pred             HHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhcc--
Confidence            9999986655333        33689999999997765444332221 00   0010000 00 01278999998874  


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       +++++++++|+||||.+++.++ +++|.++|++||+++|+||+|.+++..+   ..+.... .+...+++   |+||.+
T Consensus       182 -~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~-~~~~~d~~---~~SK~l  253 (392)
T 3ruy_A          182 -NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTG---KVFACDW-DNVTPDMY---ILGKAL  253 (392)
T ss_dssp             -TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTS---SSSGGGG-GTCCCSEE---EECGGG
T ss_pred             -CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccc---cchhhhc-cCCCCCEE---EEchhh
Confidence             7888888999999999997666 9999999999999999999998877532   1112111 12223443   778987


Q ss_pred             cccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       258 ~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      + +| +|+||+++   ++++++.    +.........+++.+++.++...|+..      .+  ++.+++++++++++.+
T Consensus       254 ~-gG~~~~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~--~~~~~~~~~~~~~l~~  317 (392)
T 3ruy_A          254 G-GGVFPISCAAA---NRDILGV----FEPGSHGSTFGGNPLACAVSIAALEVL------EE--EKLTERSLQLGEKLVG  317 (392)
T ss_dssp             G-TTTSCCEEEEE---CHHHHTT----CCTTSSCCSSTTCHHHHHHHHHHHHHH------HH--TTHHHHHHHHHHHHHH
T ss_pred             h-CChhhhEEEEE---CHHHHhh----hccCCcCCCCCCCHHHHHHHHHHHHHH------Hh--hhHHHHHHHHHHHHHH
Confidence            6 46 99999855   6664333    333333233356666666666555421      11  4677888899999999


Q ss_pred             HhhhccCCCCCcccccCCcceeeec--CCCHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          337 SLSAKDKSGKDWSFILRQIGMFSFT--GLNKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      .|+ +++.+ .+....+.+.++.|.  +...++...+. ++||.+.|++    ||++.. .+++++++++++|++++.
T Consensus       318 ~L~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~  392 (392)
T 3ruy_A          318 QLK-EIDNP-MITEVRGKGLFIGIELNEPARPYCEQLK-AAGLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVLS  392 (392)
T ss_dssp             HHT-TCCCT-TEEEEEEETTEEEEEESSCSHHHHHHHH-TTTEECCCBTTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             HHH-HhcCC-CceEEEeeeeEEEEEEcchHHHHHHHHH-HCCcEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHhC
Confidence            998 77531 123344455544443  22345566666 4799999975    888443 389999999999999863

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.96  E-value=6e-28  Score=231.80  Aligned_cols=321  Identities=12%  Similarity=-0.008  Sum_probs=215.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCcc----CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKE----YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~----y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      ...+||+.+.++   +.+. +|.+.+++.+.+...  ....    |.......++++.+++++..        +..++  
T Consensus        59 ~~~ld~~s~~~l---~~~~-~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~--  124 (409)
T 3kki_A           59 PDDIILQSNDYL---ALAN-HPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGF--------DECLL--  124 (409)
T ss_dssp             TTSEECCCSCTT---CCTT-CHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTC--------SEEEE--
T ss_pred             CceEEeeccCcc---CCcC-CHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCC--------CeEEE--
Confidence            457888877653   2222 578888887776431  1112    22234467899999998632        22334  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG  187 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~  187 (410)
                      +.+|++++..+  +...+.+||.|++++|+|+.+...+...|.+++.++.       .|++++++.+.+.  ++++++++
T Consensus       125 ~~sGt~a~~~~--l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~--~~~~vi~~  193 (409)
T 3kki_A          125 SQSGWNANVGL--LQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRH--GPGIIVVD  193 (409)
T ss_dssp             ESCHHHHHHHH--HHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHH--CSCEEEEE
T ss_pred             ecchHHHHHHH--HHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhc--CCeEEEEC
Confidence            46778888877  3344779999999999999999999999988877764       5899999999752  35777789


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcce
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      +|+||||.+.+   +++|+++|++||++||+||+|..+.++. ...  .+....+ ..+.++++.|+||.++.+|   ||
T Consensus       194 ~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~-~g~--~~~~~~~~~~~~di~~~s~sK~~~~~g---g~  264 (409)
T 3kki_A          194 SIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGP-NGA--GLLAELGLTREVHFMTASLAKTFAYRA---GA  264 (409)
T ss_dssp             SBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG-GGC--CHHHHHTCGGGCSEEEEESSSTTCSSC---EE
T ss_pred             CCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC-CCC--cchhhcCCCCCCCEEEeecchhhCCCc---eE
Confidence            99999999888   7788888999999999999998854431 111  1111111 1234688999999998653   88


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~  346 (410)
                      ++.   ++++++.+..........  ...+...+.++...++.       .+..++.+++++++++++.+.|+ +++   
T Consensus       265 v~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~aal~~-------~~~~~~~~~~~~~~~~~l~~~L~-~~g---  328 (409)
T 3kki_A          265 IWC---NNEVNRCVPFISYPAIFS--STLLPYEAAGLETTLEI-------IESADNRRQHLDRMARKLRIGLS-QLG---  328 (409)
T ss_dssp             EEE---SSSGGGTHHHHCHHHHHS--BCCCHHHHHHHHHHHHH-------HHHCHHHHHHHHHHHHHHHHHHH-TTT---
T ss_pred             EEE---CHHHHHHHHHhCcCcccc--CCCcHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHH-HcC---
Confidence            754   777666655432222111  12333333333333321       11125778889999999999999 886   


Q ss_pred             CcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcC-------CC----eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          347 DWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTK-------DG----RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       347 ~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~-------~g----Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                       +.+.  ..+.++|+.+     ..++.++++++ ||.+.+       .+    ||+++. .+++++++++++|+++++.
T Consensus       329 -~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          329 -LTIR--SESQIIGLETGDERNTEKVRDYLESN-GVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             -CCCC--CSSSEEEEEEESHHHHHHHHHHHHHT-TEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             -CccC--CCCCEEEEEeCCHHHHHHHHHHHHHC-CceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence             3433  2455666543     12346667664 999843       22    999864 4889999999999999865

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.96  E-value=2.5e-28  Score=229.82  Aligned_cols=326  Identities=14%  Similarity=0.019  Sum_probs=221.3

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ++.+|+|+.+.+    ..  .++.+.+++.+.... +...|.+.....++++.+++++. .      +.++++  ++||+
T Consensus         6 ~~~~id~~~~~~----~~--~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g-~------~~~v~~--~~~gt   69 (356)
T 1v72_A            6 RPPALGFSSDNI----AG--ASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIFE-R------DVEVFL--VPTGT   69 (356)
T ss_dssp             CCCCCBCSCGGG----CC--CCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHHT-S------CCEEEE--ESCHH
T ss_pred             CCceEeeccCCc----cC--CCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHhC-C------CCcEEE--eCCcc
Confidence            467889998765    32  368999999887632 23556555566788888888853 1      346888  89999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh--hhhC--CCCccceeeecCCCcccChhhHHH-HHhcC----CCCcEE
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNI--FNDA--RVPWSEYRYYDPKTVGLDFEGMIA-DIKAA----PGGSFI  183 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~--~~~~--g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~----~~~~~~  183 (410)
                      +++.++.  .....+||.|+++.|+|..+...  +...  |.+++.++..   ++.+|++++++ .+++.    ++++++
T Consensus        70 ~a~~~al--~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~  144 (356)
T 1v72_A           70 AANALCL--SAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPAC  144 (356)
T ss_dssp             HHHHHHH--HTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEE
T ss_pred             HHHHHHH--HHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceE
Confidence            9998873  33356999999999999876655  6666  8888888762   36789999999 88641    125677


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCC--CCCCCchhHhHHHhhcCCcEEEEecccccccccC
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA  261 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  261 (410)
                      +++++|+| ||.+++.+++++|+++|++||+++|+|++|..+..  .+.......    .....+ +++.|+||. +   
T Consensus       145 v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~~~d-~~~~s~sK~-g---  214 (356)
T 1v72_A          145 VSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMT----WKAGVD-ALSFGATKN-G---  214 (356)
T ss_dssp             EEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTT----GGGTCC-EEEECCGGG-T---
T ss_pred             EEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhh----hhhcCC-EEEEecccC-C---
Confidence            77788887 99999999999999999999999999999864321  001111000    011223 445699998 3   


Q ss_pred             CCcc--eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          262 ERIG--AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       262 ~r~G--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      .|+|  |+   ..++++++++..... .. .........++..+...+.+..    |    .+..++++++++++.+.|+
T Consensus       215 ~~~G~g~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~----~----~~~~~~~~~~~~~l~~~L~  281 (356)
T 1v72_A          215 VLAAEAIV---LFNTSLATEMSYRRK-RA-GHLSSKMRFLSAQIDAYLTDDL----W----LRNARKANAAAQRLAQGLE  281 (356)
T ss_dssp             CSSCEEEE---ESSGGGHHHHHHHHH-HT-TCCCSSTHHHHHHHHHHTSTTH----H----HHHHHHHHHHHHHHHHHHT
T ss_pred             CcCccEEE---EECHHHHhhHHHHhh-cc-CchhhhHHHHHHHHHHHHHhhh----H----HHHHHHHHHHHHHHHHHHh
Confidence            3566  64   337787776654322 11 1111222333333445555432    2    2456667788889999998


Q ss_pred             hcc-CCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          340 AKD-KSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       340 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                       ++ |    +++..+..++++|+.+..++..++.+ +||.+.+|    +  ||++.. .+++++++++++|++++++
T Consensus       282 -~~~g----~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~  352 (356)
T 1v72_A          282 -GLGG----VEVLGGTEANILFCRLDSAMIDALLK-AGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAADR  352 (356)
T ss_dssp             -TCTT----EEEESCCCSSEEEEEECHHHHHHHHH-TTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred             -hCCC----cEEccCCCccEEEEEcCHHHHHHHHh-cCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence             75 4    45555667788888776667777765 69999864    3  998653 4889999999999998765

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.96  E-value=3e-28  Score=233.25  Aligned_cols=325  Identities=10%  Similarity=0.084  Sum_probs=222.2

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC---CccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE---NKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +...|||+.|.+   .+++ .++.+.+++.+.+.. +.   ...|.  ...+..++++++++++. .      ++.+++ 
T Consensus        44 g~~~id~~~~~~---~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~------~~~i~~-  111 (401)
T 1fc4_A           44 GSHVINFCANNY---LGLA-NHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG-M------EDAILY-  111 (401)
T ss_dssp             SCEEEECCCSCT---TSCT-TCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT-C------SEEEEE-
T ss_pred             CccEEEeeccCc---cccc-CCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC-C------CcEEEe-
Confidence            356899998854   2321 268888888776643 21   01332  25678899999999972 1      244544 


Q ss_pred             ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC---CcEE
Q 015283          107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFI  183 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~---~~~~  183 (410)
                        .+|++++..+.  ...+.+||.|+++.|+|+.+...++..|.+++.++.       .|++++++.+++.++   ++++
T Consensus       112 --~sGs~a~~~~~--~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~  180 (401)
T 1fc4_A          112 --SSCFDANGGLF--ETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVL  180 (401)
T ss_dssp             --SCHHHHHHTTH--HHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEE
T ss_pred             --CChHHHHHHHH--HHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceE
Confidence              66788888763  334679999999999999888888888988887763       478888888764211   5677


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhh-cCCcEEEEecccccc-ccc
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNL-GLY  260 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~-~~~  260 (410)
                      +++++|+||||.+++   +++|.++|+++|+++|+||+|. ++....  ...  +....+ ..+.+++++|+||.+ +++
T Consensus       181 v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~--g~~--~~~~~~~~~~~di~~~s~sK~~~~~~  253 (401)
T 1fc4_A          181 IATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGEN--GRG--SHEYCDVMGRVDIITGTLGKALGGAS  253 (401)
T ss_dssp             EEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTT--SCC--HHHHTTCTTCCSEEEEESSSTTCSSS
T ss_pred             EEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCC--CCc--cHHHcCCCcCCcEEEecchhhccCCC
Confidence            888999999999888   7788888999999999999995 765311  111  111112 124579999999999 544


Q ss_pred             CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA  340 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  340 (410)
                      |   ||+++   ++++++.+........  ...+++..++.++...|+..       +..++.+++++++++++.+.|+ 
T Consensus       254 g---G~~~~---~~~~~~~l~~~~~~~~--~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~-  317 (401)
T 1fc4_A          254 G---GYTAA---RKEVVEWLRQRSRPYL--FSNSLAPAIVAASIKVLEMV-------EAGSELRDRLWANARQFREQMS-  317 (401)
T ss_dssp             C---EEEEE---CHHHHHHHHHHCHHHH--HSCCCCHHHHHHHHHHHHHH-------HTCHHHHHHHHHHHHHHHHHHH-
T ss_pred             C---EEEEc---CHHHHHHHHHhCcCce--eCCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHH-
Confidence            4   99754   7786666554321111  12245666666655444321       1125677888999999999998 


Q ss_pred             ccCCCCCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHH
Q 015283          341 KDKSGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAII  403 (410)
Q Consensus       341 ~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~  403 (410)
                      ++|    +.+. +..+.|+|+.+.     .++.+.+.+ +||.+.++       +    ||+++. .+++++++++++|+
T Consensus       318 ~~g----~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~  391 (401)
T 1fc4_A          318 AAG----FTLA-GADHAIIPVMLGDAVVAQKFARELQK-EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFT  391 (401)
T ss_dssp             HTT----CCBC-CSSSSEEEEEEECHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             HcC----Cccc-CCCCCEEEEEcCChHHHHHHHHHHHH-CCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            776    3444 445667776542     234556655 59998764       1    899873 48999999999999


Q ss_pred             HHhhhc
Q 015283          404 DSYHNV  409 (410)
Q Consensus       404 ~~l~~~  409 (410)
                      ++++++
T Consensus       392 ~~~~~~  397 (401)
T 1fc4_A          392 RIGKQL  397 (401)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            998764

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.96  E-value=1.5e-28  Score=235.02  Aligned_cols=325  Identities=12%  Similarity=0.103  Sum_probs=212.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|++.|..-+..|+  .+|.+.+++.+.+.....  ..| +.....++++.+++++    +    .+++++  ++||
T Consensus        40 ~~~ld~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~gg  106 (397)
T 2ord_A           40 NAYLDFTSGIAVNVLGH--SHPRLVEAIKDQAEKLIHCSNLF-WNRPQMELAELLSKNT----F----GGKVFF--ANTG  106 (397)
T ss_dssp             CEEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCSCCCTTS-EEHHHHHHHHHHHHTT----T----SCEEEE--ESSH
T ss_pred             CEEEECCccccccccCC--CCHHHHHHHHHHHHhcccCcccc-CCHHHHHHHHHHHHhc----C----CCeEEE--eCCH
Confidence            45789988743122343  268888888877644211  123 3344567777777764    2    478888  9999


Q ss_pred             hhHHHHHHHHHHHhC----C-CCEEEEcCCCCcch-hhhhhhCCCC------------ccceeeecCCCcccChhhHHHH
Q 015283          112 TGSLRLAAALIERYF----P-GAKVLISSPTWGNH-KNIFNDARVP------------WSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus       112 t~a~~~~~~~~~~~~----~-gd~Vl~~~p~y~~~-~~~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                      ++++..+...+..+.    + ++.|++++|+|.+. ...+...|.+            +..++.       .|++.+++.
T Consensus       107 ~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~  179 (397)
T 2ord_A          107 TEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRK  179 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHH
Confidence            999999865443221    4 47899999999654 4366666665            333332       388999988


Q ss_pred             HhcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283          174 IKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS  252 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  252 (410)
                      +++   +++++++++|+||||. +++.+++++|+++|++||+++|+||+|.+++..+   ....+..+ +...+++   |
T Consensus       180 l~~---~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~~-~~~~d~~---s  249 (397)
T 2ord_A          180 MSE---DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG---KLFAYQKY-GVVPDVL---T  249 (397)
T ss_dssp             CCT---TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSHHHHH-TCCCSEE---E
T ss_pred             hhc---CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc---cchhhhhh-CCCCCee---e
Confidence            864   6788888999999999 9999999999999999999999999998776432   12222222 2222333   8


Q ss_pred             ccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283          253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ  332 (410)
Q Consensus       253 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  332 (410)
                      |||.++ +|+|+||+++   +++++ .    +.........+++.+++.++...|+..+      +  ++.+++++++++
T Consensus       250 ~sK~~~-~G~r~G~~~~---~~~~~-~----l~~~~~~~~~~~~~~~~~a~~~~l~~~~------~--~~~~~~~~~~~~  312 (397)
T 2ord_A          250 TAKGLG-GGVPIGAVIV---NERAN-V----LEPGDHGTTFGGNPLACRAGVTVIKELT------K--EGFLEEVEEKGN  312 (397)
T ss_dssp             ECGGGG-TTSCCEEEEE---CSTTC-C----CCTTSSCCSSTTCHHHHHHHHHHHHHHT------S--TTHHHHHHHHHH
T ss_pred             eccccC-CCcCeEEEEE---chHhc-c----cCCCCcCCCCCCCHHHHHHHHHHHHHHH------h--CCHHHHHHHHHH
Confidence            899999 8999999854   55533 2    2211122223456666666655543211      0  245677778888


Q ss_pred             HHHHHhhhcc--CCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHH
Q 015283          333 KLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLAD  400 (410)
Q Consensus       333 ~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~  400 (410)
                      ++.+.|+ ++  +.+. +....+ .+.|+++.+    +. ++.+.+++ +||.+.|++    ||+++ ..++++++++++
T Consensus       313 ~l~~~L~-~~~~~~~~-~~~~~~-~g~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~iRis~~~~~~~e~i~~~~~  388 (397)
T 2ord_A          313 YLMKKLQ-EMKEEYDV-VADVRG-MGLMIGIQFREEVSNREVATKCFE-NKLLVVPAGNNTIRFLPPLTVEYGEIDLAVE  388 (397)
T ss_dssp             HHHHHHH-HHHHHCTT-EEEEEE-ETTEEEEEECTTSCHHHHHHHHHH-TTEECEEETTTEEEECCCTTCCHHHHHHHHH
T ss_pred             HHHHHHH-HHHHhCCc-eEEEEE-EeEEEEEEECChHHHHHHHHHHHH-CCCEEccCCCCEEEEECCcCCCHHHHHHHHH
Confidence            8888887 65  2210 111223 345555433    23 34566665 799999874    88854 348999999999


Q ss_pred             HHHHHhhhc
Q 015283          401 AIIDSYHNV  409 (410)
Q Consensus       401 ~l~~~l~~~  409 (410)
                      +|+++++++
T Consensus       389 ~l~~~l~~~  397 (397)
T 2ord_A          389 TLKKVLQGI  397 (397)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHhhC
Confidence            999998753

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.96  E-value=4.6e-28  Score=231.25  Aligned_cols=333  Identities=11%  Similarity=0.078  Sum_probs=220.0

Q ss_pred             hHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceE
Q 015283           26 EAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVA  104 (410)
Q Consensus        26 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~  104 (410)
                      .++....++..+++..|.       .++++.+.+++.+.+.... ..+ +..+..++++.+++++...      ++ +++
T Consensus        10 ~~~~~~~~~~~~~~~~g~-------~~~~~~v~~a~~~~~~~~~-~~~-~~~~~~~l~~~la~~~g~~------~~~~i~   74 (393)
T 2huf_A           10 VLREPLVTPNKLLMGPGP-------SNAPQRVLDAMSRPILGHL-HPE-TLKIMDDIKEGVRYLFQTN------NIATFC   74 (393)
T ss_dssp             GGGSCCCCCCCEECSSSC-------CCCCHHHHHHTTSCCCCTT-SHH-HHHHHHHHHHHHHHHHTCC------CSEEEE
T ss_pred             hhhcccCCCCeEEecCCC-------CCCCHHHHHHHHhhhccCC-CHH-HHHHHHHHHHHHHHHhCCC------CCcEEE
Confidence            344444455566665553       2347889988877654311 111 3456789999999997432      43 788


Q ss_pred             EEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283          105 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF  182 (410)
Q Consensus       105 ~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~  182 (410)
                      +  ++||++++.++...  .+.+||+|++++|+|.++.  ..++..|.+++.+++.  .++.+|++.+++.+++.  +++
T Consensus        75 ~--~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~  146 (393)
T 2huf_A           75 L--SASGHGGMEATLCN--LLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSK--VGQSLSLDEIRDALLIH--KPS  146 (393)
T ss_dssp             E--SSCHHHHHHHHHHH--HCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHH--CCS
T ss_pred             E--cCcHHHHHHHHHHH--HhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCC--CCCCCCHHHHHHHHhcc--CCc
Confidence            8  99999999998443  3679999999999998743  3456689999999873  34678999999998741  355


Q ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc-ccccC
Q 015283          183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-LGLYA  261 (410)
Q Consensus       183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G  261 (410)
                      ++++++|+||||.+++   +++|.++|++||+++|+|+++. ++..  ..   .+    ...+.++++.|+||. +|++|
T Consensus       147 ~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~-~~~~--~~---~~----~~~~~d~~~~s~sK~l~g~~G  213 (393)
T 2huf_A          147 VLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVAS-LGGA--PM---FM----DRWEIDAMYTGSQKVLGAPPG  213 (393)
T ss_dssp             EEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT-BTTB--CC---CT----TTTTCSEEECCSSSTTCCCSS
T ss_pred             EEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEcccc-cCCC--Cc---ch----hhcCccEEEECCCcccccCCC
Confidence            6667899999999888   6677888999999999999964 3311  11   11    122467889999997 46677


Q ss_pred             CCcceEEEEeCCchhHHHHHHH---HHhhc----------------cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283          262 ERIGAMNVVCSSSDLAARVKSQ---LKRLA----------------RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM  322 (410)
Q Consensus       262 ~r~G~l~~~~~~~~~~~~~~~~---~~~~~----------------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~  322 (410)
                      +  ||+++   ++++++++...   .....                .....+++..++.++...++..  .   .+.+++
T Consensus       214 ~--G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~---~~~~~~  283 (393)
T 2huf_A          214 I--TPVSF---SHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMA--C---EEGLPA  283 (393)
T ss_dssp             C--EEEEE---CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHH--H---HHCHHH
T ss_pred             e--EEEEE---CHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHH--H---HhCHHH
Confidence            6  89855   67765554432   00000                1111233444433333333211  0   112567


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCC---cceeeec----CCCH-HHHHHhhhcCcEEEcCC------C--eEE
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ---IGMFSFT----GLNK-AQSDNMTNKWHVYMTKD------G--RIS  386 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~---~~~~~~~----~~~~-~~~~~ll~~~gi~v~~~------g--Ris  386 (410)
                      .+++++++++++.+.|+ ++|    +.+..+.   .++++++    +.+. ++..+|++++||.+.++      +  ||+
T Consensus       284 ~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~  358 (393)
T 2huf_A          284 LIARHEDCAKRLYRGLQ-DAG----FELYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIG  358 (393)
T ss_dssp             HHHHHHHHHHHHHHHHH-HTT----CCBSSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHH-HcC----CeeccCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEE
Confidence            78888999999999998 776    3444332   3334443    2344 44566666569999875      2  999


Q ss_pred             e-cC-CCcccHHHHHHHHHHHhhhc
Q 015283          387 L-AG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       387 ~-~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      + +. .+++++++++++|+++++++
T Consensus       359 ~~~~~~~~e~i~~~~~~l~~~~~~~  383 (393)
T 2huf_A          359 LMGQNATTERVDRVLQVFQEAVAAV  383 (393)
T ss_dssp             CCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred             cccCcCCHHHHHHHHHHHHHHHHHc
Confidence            8 53 36788999999999998753

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.96  E-value=1.6e-28  Score=234.62  Aligned_cols=313  Identities=10%  Similarity=0.085  Sum_probs=213.0

Q ss_pred             cccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           52 YVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        52 ~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      .+++.+.+++.+....    .|.+  .....++|+++++++...      ++ ++++  ++||++++..+...  .+.+|
T Consensus        28 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~~~------~~~~v~~--~~g~t~al~~~~~~--~~~~g   93 (396)
T 2ch1_A           28 NCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIFQTE------NRATMCV--SGSAHAGMEAMLSN--LLEEG   93 (396)
T ss_dssp             CCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHHTCC------CSCEEEE--SSCHHHHHHHHHHH--HCCTT
T ss_pred             CCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHhCCC------CCcEEEE--CCcHHHHHHHHHHH--hcCCC
Confidence            3578888887665422    2433  234789999999997543      45 7888  99999999998433  37799


Q ss_pred             CEEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          129 AKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       129 d~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      |+|++++|+|..+.  ..++..|.+++.++.  +.++.+|++++++.+++.  +++++++++|+||||.+++   +++|.
T Consensus        94 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---~~~i~  166 (396)
T 2ch1_A           94 DRVLIAVNGIWAERAVEMSERYGADVRTIEG--PPDRPFSLETLARAIELH--QPKCLFLTHGDSSSGLLQP---LEGVG  166 (396)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTCEEEEEEC--CTTSCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CTTHH
T ss_pred             CeEEEEcCCcccHHHHHHHHHcCCceEEecC--CCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCceecC---HHHHH
Confidence            99999999999985  467888999999987  345679999999998741  3556677899999999988   56777


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH---
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ---  283 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~---  283 (410)
                      ++|+++|+++|+||+|. ++..  ..   .+    ...+.++++.|++|.++ ++.++|++++   +++.++.+...   
T Consensus       167 ~l~~~~~~~li~Dea~~-~g~~--~~---~~----~~~~~d~~~~s~~K~~~-~~~g~g~~~~---~~~~~~~~~~~~~~  232 (396)
T 2ch1_A          167 QICHQHDCLLIVDAVAS-LCGV--PF---YM----DKWEIDAVYTGAQKVLG-APPGITPISI---SPKALDVIRNRRTK  232 (396)
T ss_dssp             HHHHHTTCEEEEECTTT-BTTB--CC---CT----TTTTCCEEECCCC-CCC-CCSSCEEEEE---CHHHHHHHHTCSSC
T ss_pred             HHHHHcCCEEEEEcccc-ccCC--cc---ch----hhcCcCEEEEcCCcccc-CCCCeEEEEE---CHHHHHhhhhccCc
Confidence            78999999999999987 3321  11   11    11223566789999765 2345688755   66755554321   


Q ss_pred             ----H------Hh-h-----ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283          284 ----L------KR-L-----ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD  347 (410)
Q Consensus       284 ----~------~~-~-----~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~  347 (410)
                          .      +. .     ......+++..++.++...|+..     ..+.+++.+++++++++++.+.|+ ++|    
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g----  302 (396)
T 2ch1_A          233 SKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQI-----AEEGLENQIKRRIECAQILYEGLG-KMG----  302 (396)
T ss_dssp             CSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HHT----
T ss_pred             ccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHH-HCC----
Confidence                0      00 0     01122245555555554444321     123356788899999999999998 876    


Q ss_pred             cccccCCcc----eeeec----CCCH-HHHHHhhhcCcEEEcCC------C--eEEe-c-CCCcccHHHHHHHHHHHhhh
Q 015283          348 WSFILRQIG----MFSFT----GLNK-AQSDNMTNKWHVYMTKD------G--RISL-A-GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       348 ~~~~~~~~~----~~~~~----~~~~-~~~~~ll~~~gi~v~~~------g--Ris~-~-~~~~~~i~~~~~~l~~~l~~  408 (410)
                      +.+..+.++    .++++    +.+. ++.++|++++||.+.++      +  ||++ + ..+++++++++++|++++++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~  382 (396)
T 2ch1_A          303 LDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA  382 (396)
T ss_dssp             CCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             CeeccCCccccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence            344444432    24443    2344 44566766569999875      2  9998 3 34788999999999999875


Q ss_pred             c
Q 015283          409 V  409 (410)
Q Consensus       409 ~  409 (410)
                      +
T Consensus       383 ~  383 (396)
T 2ch1_A          383 T  383 (396)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.96  E-value=6.1e-28  Score=232.70  Aligned_cols=327  Identities=14%  Similarity=0.093  Sum_probs=216.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhc--cCCCc----c----CcCCcccHHHHHHHHHHhcCCCCCcccCCce
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE--RGENK----E----YLPIEGLAAFNKVTAELLFGADNSVLKEQRV  103 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~----~----y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i  103 (410)
                      ++.+.|..+.+      .++++.+.+++.+.+.  .....    .    |.......++++.+++++..      +++++
T Consensus        21 ~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~------~~~~v   88 (423)
T 3lvm_A           21 KLPIYLDYSAT------TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGA------DPREI   88 (423)
T ss_dssp             CSSEECBTTTC------CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTC------CGGGE
T ss_pred             CCCEeecCCCc------CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCC------CCCeE
Confidence            45666664443      3457999999988765  21100    1    11223457888888888643      26789


Q ss_pred             EEEecCChhhHHHHHHHHHHH-hC-CCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283          104 ATVQGLSGTGSLRLAAALIER-YF-PGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       104 ~~~~t~ggt~a~~~~~~~~~~-~~-~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      ++  ++||++|+.++...+.. +. +||+|+++.|+|+++...+   ...|.+++.++..  .++.+|++.+++.+.+  
T Consensus        89 ~~--~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--  162 (423)
T 3lvm_A           89 VF--TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ--RNGIIDLKELEAAMRD--  162 (423)
T ss_dssp             EE--ESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHCCT--
T ss_pred             EE--eCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC--CCCccCHHHHHHhcCC--
Confidence            99  99999999998554422 23 7999999999999987766   4559999999873  4677899999999875  


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                       ++.++++++|+||||.+++   +++|+++|++||++||+||+|...... .     .    ....+.++++.|+||.+|
T Consensus       163 -~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-~-----~----~~~~~~di~~~s~sK~~g  228 (423)
T 3lvm_A          163 -DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP-I-----D----LSQLKVDLMSFSGHKIYG  228 (423)
T ss_dssp             -TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC-C-----C----TTTSCCSEEEEESTTTTS
T ss_pred             -CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-c-----C----hhhcCCCEEEechHHhcC
Confidence             6788889999999999988   667888899999999999997653321 1     1    112235688999999888


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhh--c-cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRL--A-RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      ++|  +||+++   +++..+.+.......  . ......++...+.++...+..      +.+.+++.+++++++++++.
T Consensus       229 ~~g--~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~  297 (423)
T 3lvm_A          229 PKG--IGALYV---RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI------AKEEMATEMERLRGLRNRLW  297 (423)
T ss_dssp             CSS--CEEEEE---CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--eEEEEE---eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH
Confidence            766  799855   544322221110000  0 011123334333333333321      12335788899999999999


Q ss_pred             HHhhhccCCCCCcccccCCc----cee-ee-cCCCHHHHHHhhhcCcEEEcCC-------------------------C-
Q 015283          336 DSLSAKDKSGKDWSFILRQI----GMF-SF-TGLNKAQSDNMTNKWHVYMTKD-------------------------G-  383 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~----~~~-~~-~~~~~~~~~~ll~~~gi~v~~~-------------------------g-  383 (410)
                      +.|+ +++.   +.+..+..    +++ ++ .+.+.+.+.+.+.+  |.+.+|                         + 
T Consensus       298 ~~L~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~  371 (423)
T 3lvm_A          298 NGIK-DIEE---VYLNGDLEHGAPNILNVSFNYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSS  371 (423)
T ss_dssp             HHHT-TSTT---EEEESCSTTBCTTEEEEEETTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTE
T ss_pred             HHHh-cCCC---EEEeCCccccCCCeEEEEeCCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCce
Confidence            9998 7731   34443332    222 22 24455555555554  777664                         3 


Q ss_pred             -eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          384 -RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 -Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                       ||+++. .+++++++++++|+++++++
T Consensus       372 iRi~~~~~~t~e~i~~~~~~l~~~~~~~  399 (423)
T 3lvm_A          372 IRFSLGRFTTEEEIDYTIELVRKSIGRL  399 (423)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence             999874 47899999999999998653

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.96  E-value=1.9e-28  Score=232.78  Aligned_cols=320  Identities=13%  Similarity=0.033  Sum_probs=213.3

Q ss_pred             eecCCCcccccHHHHHHHHHhhccCC---CccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283           44 YRTEELQPYVLDVVKKAENLMLERGE---NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR  116 (410)
Q Consensus        44 ~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~  116 (410)
                      ++|..+.+++++.+++++.+.+....   ...|..    .....++++++++++..      +++++++  |+||++++.
T Consensus         3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--~~g~t~a~~   74 (382)
T 4eb5_A            3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG------GGGTVVF--TSGATEANN   74 (382)
T ss_dssp             BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTC------TTEEEEE--ESSHHHHHH
T ss_pred             eeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--cCchHHHHH
Confidence            35555666678999999988764311   012432    24678899999998642      2578988  999999999


Q ss_pred             HHHHHHHH--hCCCCEEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          117 LAAALIER--YFPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       117 ~~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++...+..  ..+||+|++++|+|+.+...+.   ..|++++.+++.  +++.+|++.+++.+++   +++++++++|+|
T Consensus        75 ~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~~~n  149 (382)
T 4eb5_A           75 LAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRD---DTILVSVQHANN  149 (382)
T ss_dssp             HHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBC--TTSCBCHHHHHHHCCT---TEEEEECCSBCT
T ss_pred             HHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccC--CCCccCHHHHHHHhcC---CCeEEEEeccCC
Confidence            98554421  1699999999999998866654   478899888873  4567899999999875   678888899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++   +++|.++|++||++ |+|++|. ++.  ...   .+..    .+.+++++|+||.+|++|  +||+++  
T Consensus       150 ptG~~~~---l~~i~~l~~~~~~~-i~D~a~~-~g~--~~~---~~~~----~~~di~~~s~sK~~g~~g--~G~~~~--  211 (382)
T 4eb5_A          150 EIGTIQP---VEEISEVLAGKAAL-HIDATAS-VGQ--IEV---DVEK----IGADMLTISSNDIYGPKG--VGALWI--  211 (382)
T ss_dssp             TTCBBCC---HHHHHHHHTTSSEE-EEECTTT-BTT--BCC---CHHH----HTCSEEEEETGGGTCCSS--CEEEEE--
T ss_pred             CccccCC---HHHHHHHHHHCCCE-EEEcchh-cCC--ccc---Cccc----cCCCEEEeehHHhcCCCc--eEEEEE--
Confidence            9999887   56788889999999 9999987 321  111   1111    135688999999988666  688854  


Q ss_pred             CCchhHHHHHHHHHh---hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          272 SSSDLAARVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                      +++.   .+......   .......+++...+.++...++.      +.+.+++.+++++++++++.+.|+ +++  + +
T Consensus       212 ~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~-~~~--~-~  278 (382)
T 4eb5_A          212 RKEA---KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEI------TAMEWREEAERLRRLRDRIIDNVL-KIE--E-S  278 (382)
T ss_dssp             ETTC---CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHT-TST--T-E
T ss_pred             cccc---ccCceecCCCccccccCCCccHHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHh-hCC--C-e
Confidence            3321   11110000   00111223343333333333321      233457788889999999999998 762  1 3


Q ss_pred             ccccCCc---ceeeec---CCCHH-HHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCcc
Q 015283          349 SFILRQI---GMFSFT---GLNKA-QSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSLA  393 (410)
Q Consensus       349 ~~~~~~~---~~~~~~---~~~~~-~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~~  393 (410)
                      .+..+..   +.++++   +.+.+ +.+.+. ++||.+.++                         +  ||+++. .+++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~  357 (382)
T 4eb5_A          279 YLNGHPEKRLPNNVNVRFSYIEGESIVLSLD-MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDE  357 (382)
T ss_dssp             EECSCSSSBCTTEEEEEETTSCHHHHHHHHH-HHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHH
T ss_pred             EEeCCcccCCCCEEEEEeCCcCHHHHHHHHH-HCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHH
Confidence            4444321   323332   33444 455554 569998763                         2  999874 4899


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      ++++++++|++++++
T Consensus       358 ~i~~~~~~l~~~~~~  372 (382)
T 4eb5_A          358 DVDRLLEVLPGVIER  372 (382)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998765

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.96  E-value=7.8e-27  Score=227.24  Aligned_cols=357  Identities=11%  Similarity=0.084  Sum_probs=226.8

Q ss_pred             CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeee-ecCCCc---ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283           12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAY-RTEELQ---PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV   85 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~-~~~~~~---~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a   85 (410)
                      ++..+.+..+.....+...  .....++++..|.+ +|....   ..+++.+.+++..    .. ..|.+..+..++|++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~~----~~-~~y~~~~~~~~l~~~   83 (456)
T 2ez2_A            9 RIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMM----GD-EAYAGSENFYHLERT   83 (456)
T ss_dssp             CCCCCCCCCCCCHHHHHHHHHHTTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHTT----CC-CCSSSCHHHHHHHHH
T ss_pred             eeeeecccCCCCHHHHHHHHHHCCCCcccCCcccceeeeccccCCccCCHHHHHHhhc----ch-hhcccChhHHHHHHH
Confidence            4555555555444443322  23345778887763 443222   2345677766542    22 568778889999999


Q ss_pred             HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCC-cchhhhhhhCCCCccceeeecC----
Q 015283           86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW-GNHKNIFNDARVPWSEYRYYDP----  160 (410)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~----  160 (410)
                      +++++..        +++++  ++||++++.+++..  .+.+||  +++.|+| +.+...+...|++++.+++.+.    
T Consensus        84 la~~~~~--------~~~~~--~~~gt~a~~~al~~--l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~  149 (456)
T 2ez2_A           84 VQELFGF--------KHIVP--THQGRGAENLLSQL--AIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAG  149 (456)
T ss_dssp             HHHHHCC--------SEEEE--ESSHHHHHHHHHHH--HCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTT
T ss_pred             HHHHhCC--------CcEEE--eCCcHHHHHHHHHH--hCCCCC--EeccccccchhHHHHHHcCCEEEEeccccccccc
Confidence            9999732        36778  89999999998433  367999  7888999 8878888999999998887421    


Q ss_pred             C----CcccChhhHHHHHhcCC-CCcEEEEeCCCCC-CCCCCCCHHHHHHHHHHHHHcCCcccccccCCC----------
Q 015283          161 K----TVGLDFEGMIADIKAAP-GGSFILLHGCAHN-PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG----------  224 (410)
Q Consensus       161 ~----~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~N-PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~----------  224 (410)
                      .    ++.+|++++++.+.+.. ...+++++++|+| |||.+++.+++++|+++|++||+++|+||+|..          
T Consensus       150 ~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~  229 (456)
T 2ez2_A          150 LNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQE  229 (456)
T ss_dssp             CCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHS
T ss_pred             ccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccc
Confidence            1    36789999999987521 1237778889998 999999999999999999999999999999875          


Q ss_pred             CCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhcc-CcccCCChhHHHH-
Q 015283          225 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLAR-PMYSNPPVHGARI-  302 (410)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-  302 (410)
                      +.+.+  .....+........+++++ |++|..+ +| +.||+  ++.++++++++......... ....+.+.....+ 
T Consensus       230 ~~~~g--~~~~~~~~~~~~~~d~~~~-S~kk~~~-~~-~gG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  302 (456)
T 2ez2_A          230 QGFEN--KSIAEIVHEMFSYADGCTM-SGKKDCL-VN-IGGFL--CMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAM  302 (456)
T ss_dssp             TTCTT--SCHHHHHHHHHTTCSEEEE-ETTTTTC-CS-SCEEE--EESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHH
T ss_pred             cccCC--cchhhhhhhhcccCCEEEE-eCcccCC-CC-ceeEE--EECCHHHHHHHHHHHhhccCcccccCcchhHHHHH
Confidence            33321  1111111011222345544 7888765 66 78997  44467776665543221111 0111222222222 


Q ss_pred             HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C-HHH-----HH
Q 015283          303 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N-KAQ-----SD  369 (410)
Q Consensus       303 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~-~~~-----~~  369 (410)
                      +...++  .+    .   ++..++.+++.+++.+.|+ +.|    +.+..+.+++++|+.+       + .++     ..
T Consensus       303 a~~~~~--~~----~---~~~~~~~~~~~~~l~~~L~-~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  368 (456)
T 2ez2_A          303 AIGLRE--AM----Q---YEYIEHRVKQVRYLGDKLK-AAG----VPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAA  368 (456)
T ss_dssp             HHHHHH--HT----C---HHHHHHHHHHHHHHHHHHH-HTT----CCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHH
T ss_pred             HHHHHH--Hh----H---HHHHHHHHHHHHHHHHHHh-cCC----CccccCCCceEEEEEhHHhcCCCChhhccHHHHHH
Confidence            222211  00    0   2333444556677788887 665    3555566777777532       2 223     44


Q ss_pred             HhhhcCcEEEcC------------------C-C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          370 NMTNKWHVYMTK------------------D-G--RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       370 ~ll~~~gi~v~~------------------~-g--Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++++++||.+.+                  + +  ||+++.  .+++++++++++|++++++
T Consensus       369 ~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~  430 (456)
T 2ez2_A          369 SIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             HHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence            554566887532                  1 3  999873  4899999999999998764

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.96  E-value=1.4e-27  Score=231.10  Aligned_cols=334  Identities=14%  Similarity=0.042  Sum_probs=206.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|......|+.  +|.+.+++.+++.......| +.....++++.+++++. .      ++++++  ++||++
T Consensus        55 ~~ylD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-~------~~~v~~--~~sGse  122 (434)
T 3l44_A           55 NKYIDYLAAYGPIITGHA--HPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEAMP-A------LDKVRF--VNSGTE  122 (434)
T ss_dssp             CEEEECCGGGTTCSSCBT--CHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHCT-T------CSEEEE--ESSHHH
T ss_pred             CEEEECCCchhccccCCC--CHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHhCC-C------CCEEEE--eCchHH
Confidence            467899888753344553  68999998888765432334 56677788898888853 1      578999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-CCCccceeeecCCCc------------ccChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RVPWSEYRYYDPKTV------------GLDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~------------~~d~~~l~~~i~~~~~~  180 (410)
                      +++.+++++....++++|++.+|+|.++....... |.....+........            -.|++.+++.+.+.++.
T Consensus       123 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  202 (434)
T 3l44_A          123 AVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHE  202 (434)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCC
Confidence            99999766654457899999999998765544332 221111111000000            01789999888753335


Q ss_pred             cEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      +.++++++++|++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+   ....... .....+   +.|+||.++ 
T Consensus       203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g---~~~~~~~-~~~~~d---i~t~sK~~~-  273 (434)
T 3l44_A          203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFM---YGGAQDL-LGVTPD---LTALGKVIG-  273 (434)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSS---SSCHHHH-HTCCCS---EEEEEGGGG-
T ss_pred             EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecc---ccHHHHH-cCCCCC---eeehhhhhc-
Confidence            66777666666677665 7888999999999999999999999988 321   1112212 222223   348999998 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      +|+|+||+++   ++++++.+.... ......+.+.+.+++.++...|+   +.           +..++++++++++.+
T Consensus       274 ~G~~iG~~~~---~~~i~~~~~~~~-~~~~~~t~~~~~~a~aaa~aal~~~~~~-----------~~~~~~~~~~~~l~~  338 (434)
T 3l44_A          274 GGLPIGAYGG---KKEIMEQVAPLG-PAYQAGTMAGNPASMASGIACLEVLQQE-----------GLYEKLDELGATLEK  338 (434)
T ss_dssp             TTSSCEEEEE---CHHHHTTBTTTS-SBCCCCTTTTCHHHHHHHHHHHHHHTST-----------THHHHHHHHHHHHHH
T ss_pred             CCcCeeeEEE---cHHHHHhhccCC-CcccCCCCCcCHHHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHH
Confidence            8999999855   777544432110 01111223455666665544443   32           223334444444444


Q ss_pred             Hhhh---ccCCCCCcccccCCcceeeecCC--------------C----HHHHHHhhhcCcEEEcCCC----eEEecCCC
Q 015283          337 SLSA---KDKSGKDWSFILRQIGMFSFTGL--------------N----KAQSDNMTNKWHVYMTKDG----RISLAGLS  391 (410)
Q Consensus       337 ~l~~---~~g~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~  391 (410)
                      .|++   ..+.   .....+. |.|.++.+              +    .++...+++ +||.+.|++    |+++.. +
T Consensus       339 ~L~~~~~~~~~---~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~rl~~~~-t  412 (434)
T 3l44_A          339 GILEQAAKHNI---DITLNRL-KGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQ-EGVNLAPSKYEAWFLTTEH-T  412 (434)
T ss_dssp             HHHHHHHHTTC---CEEEEEE-TTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHH-TTEECCSSTTCCEECCTTC-C
T ss_pred             HHHHHHHhCCC---CEEEEee-ccEEEEEEecCcccchhhccccCHHHHHHHHHHHHH-CCeEEeecCCCcEEEeccc-C
Confidence            4430   2332   1222333 34433311              1    234556665 699999976    776544 9


Q ss_pred             cccHHHHHHHHHHHhhhc
Q 015283          392 LAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++++|+++++++
T Consensus       413 ~e~i~~~l~~l~~~l~~~  430 (434)
T 3l44_A          413 KEDIEYTIEAVGRAFAAL  430 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999998753

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.96  E-value=2.1e-27  Score=228.66  Aligned_cols=329  Identities=11%  Similarity=0.002  Sum_probs=210.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC---ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN---KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+|+..|.+-...|++. +|.+.+++.+.+.....   ..| +.....++++.+++++    +... +++|++  ++|
T Consensus        42 ~~~lD~~~~~~~~~lG~~~-~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~~~~-~~~v~~--~~g  112 (419)
T 2eo5_A           42 NKYLDFTSGIGVNNLGWPS-HPEVIKIGIEQMQKLAHAAANDF-YNIPQLELAKKLVTYS----PGNF-QKKVFF--SNS  112 (419)
T ss_dssp             CEEEESSGGGGTTTTCBSC-CHHHHHHHHHHHTTSCCCSCSCS-CCHHHHHHHHHHHHHS----SCSS-CEEEEE--ESS
T ss_pred             CEEEEccCChhhhccCCCC-CHHHHHHHHHHHhhCcccccccc-CCHHHHHHHHHHHHhC----CCCc-CCEEEE--eCc
Confidence            4578998887411223321 58899999888754311   123 2333456666666664    3222 578999  999


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hC-------------CCCccceeeecCCCc----c--------
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA-------------RVPWSEYRYYDPKTV----G--------  164 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~-------------g~~~~~v~~~~~~~~----~--------  164 (410)
                      |++++..+++++..+ +||+|++++|+|.++..... ..             +..++.++..  +.+    +        
T Consensus       113 g~ea~~~ai~~~~~~-~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~g~~~~~~~~  189 (419)
T 2eo5_A          113 GTEAIEASIKVVKNT-GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYP--NPYRNPWHINGYENPS  189 (419)
T ss_dssp             HHHHHHHHHHHHHTT-SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCC--CSSSCTTCCCTTTCHH
T ss_pred             hHHHHHHHHHHHHHh-hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCC--ccccccccccccccch
Confidence            999999986544322 38999999999976543221 11             1245556552  222    1        


Q ss_pred             ----cChhhHH-HHHhcCC--CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhH
Q 015283          165 ----LDFEGMI-ADIKAAP--GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS  236 (410)
Q Consensus       165 ----~d~~~l~-~~i~~~~--~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~  236 (410)
                          +|++.++ +.+++..  +++++++++..+||||. +++.+++++|.++|++||+++|+||+|.+|+..+.   .+.
T Consensus       190 ~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~---~~~  266 (419)
T 2eo5_A          190 ELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK---LFA  266 (419)
T ss_dssp             HHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSG
T ss_pred             hhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc---hhh
Confidence                4678888 8887421  24556664444567896 67888899999999999999999999998875321   111


Q ss_pred             hHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHH
Q 015283          237 VRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDE  315 (410)
Q Consensus       237 ~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~  315 (410)
                      +.. .....+++   ||||.++ +| +|+||+++   +++++ .+ ..   ... .+.+.+.+++.++...|+..     
T Consensus       267 ~~~-~~~~~d~~---t~sK~~~-~G~~riG~~~~---~~~~~-~~-~~---~~~-~t~~~n~~~~~aa~aal~~~-----  327 (419)
T 2eo5_A          267 IEN-FNTVPDVI---TLAKALG-GGIMPIGATIF---RKDLD-FK-PG---MHS-NTFGGNALACAIGSKVIDIV-----  327 (419)
T ss_dssp             GGG-GTCCCSEE---EECGGGG-TTTSCCEEEEE---EGGGC-CC-----------CCCCCHHHHHHHHHHHHHH-----
T ss_pred             HHh-cCCCCCEE---Eeccccc-CCccceEEEEE---chHhh-cC-Cc---ccC-CCCCCCHHHHHHHHHHHHHH-----
Confidence            111 12233433   8999999 59 99999855   56654 43 21   111 22345666666666555421     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-C----HHHHHHhhhcCcEEEcCCC----eEE
Q 015283          316 WKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-N----KAQSDNMTNKWHVYMTKDG----RIS  386 (410)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~ll~~~gi~v~~~g----Ris  386 (410)
                           ++.+++++++++++.+.|+ ++ .    ....+. |.|.++.+ .    ..+...++ ++||.+.|++    ||+
T Consensus       328 -----~~~~~~~~~~~~~l~~~L~-~~-~----~~~~~~-g~~~~i~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~lRis  394 (419)
T 2eo5_A          328 -----KDLLPHVNEIGKIFAEELQ-GL-A----DDVRGI-GLAWGLEYNEKKVRDRIIGESF-KRGLLLLPAGRSAIRVI  394 (419)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHT-TS-S----SEEEEE-TTEEEEECSCHHHHHHHHHHHH-HTTEECEEETTTEEEEC
T ss_pred             -----HHHHHHHHHHHHHHHHHHH-Hh-h----hheEee-eEEEEEEEecCccHHHHHHHHH-HCCCEEecCCCCEEEEE
Confidence                 2267888899999999998 65 1    223333 55666655 2    22455665 4799999864    897


Q ss_pred             ecC-CCcccHHHHHHHHHHHhhhc
Q 015283          387 LAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       387 ~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++. .+++++++++++|+++++++
T Consensus       395 ~~~~~t~e~i~~~l~~l~~~l~~~  418 (419)
T 2eo5_A          395 PPLVISEEEAKQGLDILKKVIKVV  418 (419)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHhc
Confidence            652 48999999999999998764

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.95  E-value=1.1e-27  Score=228.97  Aligned_cols=334  Identities=13%  Similarity=0.080  Sum_probs=216.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|++.|.+....++  .++.+.+++.+.+... . ...| +.....++++.+++++..      .++++++  ++||
T Consensus        45 ~~~ld~~~~~~~~~~g~--~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~------~~~~v~~--~~gg  113 (395)
T 1vef_A           45 NEYIDCVGGYGVANLGH--GNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAILPP------ELNRVFP--VNSG  113 (395)
T ss_dssp             CEEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTSCT------TEEEEEE--ESSH
T ss_pred             CEEEEccCccccccCCC--CCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhcCC------CcCEEEE--cCcH
Confidence            45789988864222333  3688999888877432 1 1224 445667888888887421      2678988  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcch-hhhhhhCCCCccc---eeeecCCC--cccChhhHHHHHhcCCCCcEEEE
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFNDARVPWSE---YRYYDPKT--VGLDFEGMIADIKAAPGGSFILL  185 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~---v~~~~~~~--~~~d~~~l~~~i~~~~~~~~~ii  185 (410)
                      ++++.++...+..+.+||+|++++|+|.+. ...+...|.+...   +|+..+-.  ...|++++++.+++   ++++++
T Consensus       114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~---~~~~v~  190 (395)
T 1vef_A          114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE---ETAAVI  190 (395)
T ss_dssp             HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCT---TEEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhcc---CEEEEE
Confidence            999999865443335889999999998654 4456666765321   22211000  01488999998874   677777


Q ss_pred             eCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283          186 HGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       186 ~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      +++++||||.+. +.+++++|+++|++||+++|+||+|.+++..+   ....+.. .+...+++   ||||.++. |+|+
T Consensus       191 ~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g---~~~~~~~-~~~~~d~~---s~sK~~~~-g~~~  262 (395)
T 1vef_A          191 LEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTG---KRFAFEH-FGIVPDIL---TLAKALGG-GVPL  262 (395)
T ss_dssp             ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHH-HTCCCSEE---EECGGGGT-TSSC
T ss_pred             EeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCC---chhHhhh-cCCCCCEE---EEcccccC-CCce
Confidence            777789999865 67889999999999999999999999765321   1111111 22223433   88999995 9999


Q ss_pred             ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      ||+++   ++++++++    .........+++.+++.++...|+..      .+  ++..++++++++++.+.|+ +++.
T Consensus       263 G~~~~---~~~~~~~l----~~~~~~~~~~~~~~~~~a~~~al~~~------~~--~~~~~~~~~~~~~l~~~l~-~~~~  326 (395)
T 1vef_A          263 GVAVM---REEVARSM----PKGGHGTTFGGNPLAMAAGVAAIRYL------ER--TRLWERAAELGPWFMEKLR-AIPS  326 (395)
T ss_dssp             EEEEE---EHHHHHTS----CTTSSCCSSTTCHHHHHHHHHHHHHH------HH--HTTHHHHHHHHHHHHHHHH-TSCC
T ss_pred             EEEEe---hHHHHhhh----ccCCcCCCcCCCHHHHHHHHHHHHHH------Hh--CCHHHHHHHHHHHHHHHHH-Hhhc
Confidence            99855   55544433    22111122245555555554444321      11  3456778888899999998 7753


Q ss_pred             CCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhh
Q 015283          345 GKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~  407 (410)
                      +  +....+..+.|+|+.+   ..++...+++++||.+.+++    ||+++ ..+++++++++++|+++++
T Consensus       327 ~--~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~  395 (395)
T 1vef_A          327 P--KIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA  395 (395)
T ss_dssp             T--TEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             C--ceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHhC
Confidence            1  1111233456666544   34566777724699999864    88765 2489999999999998863

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.95  E-value=1.8e-27  Score=230.69  Aligned_cols=340  Identities=11%  Similarity=-0.009  Sum_probs=209.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|++.|.+....|+  .+|.+.+++.+.+...  ..|....+..++++++++++....+... ++++++  ++||++
T Consensus        43 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~--~~ggse  115 (439)
T 3dxv_A           43 RELIDLSGAWGAASLGY--GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEG-THKIWF--GHSGSD  115 (439)
T ss_dssp             CEEEESSTTTTTCTTCB--SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEE--ESSHHH
T ss_pred             CEEEECCCchhhccCCC--CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEE--eCCHHH
Confidence            46789998876333454  3689999988877542  3344345555666666666655443221 168999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-CCC--------------ccceeeecCCCccc-----ChhhHHHH
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RVP--------------WSEYRYYDPKTVGL-----DFEGMIAD  173 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~--------------~~~v~~~~~~~~~~-----d~~~l~~~  173 (410)
                      ++..+.+++..+.+++.|++.+|+|.++....... |..              +..++..  +.+..     |++.+++.
T Consensus       116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~  193 (439)
T 3dxv_A          116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEK  193 (439)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHH
Confidence            99998765544557789999999886654433322 322              1233331  11111     68999999


Q ss_pred             Hh-cCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          174 IK-AAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       174 i~-~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      +. ..+++++++++++++|++|.+.+.++ +++|.++|++||+++|+||+|.+|+..+   ....... .+...+++   
T Consensus       194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g---~~~~~~~-~~~~~di~---  266 (439)
T 3dxv_A          194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSG---RLHCFEH-EGFVPDIL---  266 (439)
T ss_dssp             HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTS---SSSGGGG-TTCCCSEE---
T ss_pred             HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHh-cCCCCCEE---
Confidence            84 22346777787888888888765555 9999999999999999999999876432   1111111 12223433   


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      ||||.++ +|+|+||+++   ++++++.    +.......+. ++.+++.++...|+...      +  +...+++++++
T Consensus       267 s~sK~~~-~G~riG~~~~---~~~~~~~----~~~~~~~~t~-~~~~~~~aa~aal~~~~------~--~~~~~~~~~~~  329 (439)
T 3dxv_A          267 VLGKGLG-GGLPLSAVIA---PAEILDC----ASAFAMQTLH-GNPISAAAGLAVLETID------R--DDLPAMAERKG  329 (439)
T ss_dssp             EECGGGG-TTSCCEEEEE---EHHHHTS----CSSSSCCTTT-TCHHHHHHHHHHHHHHH------H--TTHHHHHHHHH
T ss_pred             EEcchhc-CCcceEEEEE---CHHHHhh----hcCCCcCCCc-ccHHHHHHHHHHHHHHH------h--cCHHHHHHHHH
Confidence            9999999 6999999855   6674433    3322222223 55666666655544211      0  23334444555


Q ss_pred             HHHHHHhhhccCCC-CCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCCC------eEEecC-C
Q 015283          332 QKLFDSLSAKDKSG-KDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG------RISLAG-L  390 (410)
Q Consensus       332 ~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~g------Ris~~~-~  390 (410)
                      +++.+.|. ++... ..+....+. |.|+++.+             ..++...+++ .||.+.|++      ||+++. .
T Consensus       330 ~~~~~~l~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~iRi~~~~~~  406 (439)
T 3dxv_A          330 RLLRDGLS-ELAKRHPLIGDIRGR-GLACGMELVCDRQSREPARAETAKLIYRAYQ-LGLVVYYVGMNGNVLEFTPPLTI  406 (439)
T ss_dssp             HHHHHHHH-HHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHHH-HTEECEEESTTSCEEEECCCTTC
T ss_pred             HHHHHHHH-HHHHhCCCeEEEEEE-EEEEEEEEecCccccCCCHHHHHHHHHHHHH-CCcEEeecCCCCCEEEEECCCCC
Confidence            55555554 33100 002223333 44554422             1234566666 599998864      887543 3


Q ss_pred             CcccHHHHHHHHHHHhhhc
Q 015283          391 SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++++|+++++++
T Consensus       407 t~e~i~~~l~~l~~~l~~~  425 (439)
T 3dxv_A          407 TETDIHKALDLLDRAFSEL  425 (439)
T ss_dssp             CHHHHHHHHHHHHHHHHTG
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            8999999999999998764

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.95  E-value=1.5e-27  Score=230.38  Aligned_cols=334  Identities=12%  Similarity=0.033  Sum_probs=205.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|......|+.  +|.+.+++.+.+.......| +.....++++.+++++.       .++++++  ++||++
T Consensus        52 ~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~-------~~~~v~~--~~ggse  119 (427)
T 3fq8_A           52 NRYIDYVGTWGPAICGHA--HPEVIEALKVAMEKGTSFGA-PCALENVLAEMVNDAVP-------SIEMVRF--VNSGTE  119 (427)
T ss_dssp             CEEEESSGGGTTCTTCBT--CHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHST-------TCSEEEE--ESSHHH
T ss_pred             CEEEECCCchhhhccCCC--CHHHHHHHHHHHHhCCCcCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCCHHH
Confidence            468999988753344553  69999999888765322223 33344455555555532       2678999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-CCCccceeeecCCCcc------------cChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RVPWSEYRYYDPKTVG------------LDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~------------~d~~~l~~~i~~~~~~  180 (410)
                      +++.+.++...+.++++|++.+|+|.++....... |.....+......+..            -|++.+++.+++.+++
T Consensus       120 a~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  199 (427)
T 3fq8_A          120 ACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGE  199 (427)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTT
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCC
Confidence            99999766555556689999999997765443322 2221111110011110            1889999999875556


Q ss_pred             cEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      +.++++++++|++|.+.+. +.+++|.++|++||++||+||+|.+| ..+   ....... .....+   +.|+||.++ 
T Consensus       200 ~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g---~~~~~~~-~~~~~d---i~t~sK~~~-  270 (427)
T 3fq8_A          200 IAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIA---YGGVQEK-FGVTPD---LTTLGKIIG-  270 (427)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTB---TTHHHHH-TTCCCS---EEEECGGGG-
T ss_pred             EEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC---cchhhHh-cCCCCC---hhhhhhhhh-
Confidence            7777877778888877764 44999999999999999999999987 321   1122211 122223   358999999 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      +|+|+||+++   ++++++.+... .......+.+++.+++.++...|+   +.           ...++++++++++.+
T Consensus       271 ~G~~~G~~~~---~~~~~~~~~~~-~~~~~~~t~~~~~~~~aa~~aal~~~~~~-----------~~~~~~~~~~~~~~~  335 (427)
T 3fq8_A          271 GGLPVGAYGG---KREIMQLVAPA-GPMYQAGTLSGNPLAMTAGIKTLELLRQP-----------GTYEYLDQITKRLSD  335 (427)
T ss_dssp             TTSSCEEEEE---CHHHHTTBTTT-SSBCCCCTTTTCHHHHHHHHHHHHHHTST-----------THHHHHHHHHHHHHH
T ss_pred             CCcceEEEEE---cHHHHHhhccC-CCccccCCCCcCHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHH
Confidence            7999999855   77754443321 001111222445666665544443   22           223334444444444


Q ss_pred             Hhhh---ccCCCCCcccccCCcceeeecCC-----C-------------HHHHHHhhhcCcEEEcCCC--eEEecC-CCc
Q 015283          337 SLSA---KDKSGKDWSFILRQIGMFSFTGL-----N-------------KAQSDNMTNKWHVYMTKDG--RISLAG-LSL  392 (410)
Q Consensus       337 ~l~~---~~g~~~~~~~~~~~~~~~~~~~~-----~-------------~~~~~~ll~~~gi~v~~~g--Ris~~~-~~~  392 (410)
                      .|++   ..+.    ....+..+.+.++.+     .             .++...+++ +||.+.+++  |++++. .++
T Consensus       336 ~l~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~~r~~~~~~~t~  410 (427)
T 3fq8_A          336 GLLAIAQETGH----AACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLE-QGIYLAPSQFEAGFTSLAHTE  410 (427)
T ss_dssp             HHHHHHHHTTC----CCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTTSCEECCTTCCH
T ss_pred             HHHHHHHhCCC----CeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHH-CCcEEecCCCCCEEeeCcCCH
Confidence            4430   2331    222233455554422     1             234556665 699999987  776543 389


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++|++++++
T Consensus       411 e~i~~~l~~l~~~l~~  426 (427)
T 3fq8_A          411 EDIDATLAAARTVMSA  426 (427)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999875

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.95  E-value=4.3e-27  Score=227.21  Aligned_cols=335  Identities=16%  Similarity=0.058  Sum_probs=212.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|......|+.  +|.+.+++.+++.... ..+.+.....++++.+++++. .      .+++++  ++||++
T Consensus        53 ~~ylD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~-~~~~~~~~~~~l~~~la~~~~-~------~~~v~~--~~~Gse  120 (429)
T 3k28_A           53 NEYIDYVLSWGPLIHGHA--NDRVVEALKAVAERGT-SFGAPTEIENKLAKLVIERVP-S------IEIVRM--VNSGTE  120 (429)
T ss_dssp             CEEEESCGGGTTCTTCBS--CHHHHHHHHHHHHHCS-CCSSCCHHHHHHHHHHHHHST-T------CSEEEE--ESSHHH
T ss_pred             CEEEECCCChhhcccCCC--CHHHHHHHHHHHhhCc-CcCCCCHHHHHHHHHHHHhCC-C------CCEEEE--eCChHH
Confidence            467899988753345543  6999999988876543 233466777899999999853 1      578999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcc------------cChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVG------------LDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~------------~d~~~l~~~i~~~~~~  180 (410)
                      +++.+.++.....++++|++.+|+|.++..... ..|.....+.........            -|++.+++.+.+.+++
T Consensus       121 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  200 (429)
T 3k28_A          121 ATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDD  200 (429)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCC
Confidence            999987666544577899999999976654333 233222222211011110            1788999888753345


Q ss_pred             cEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      +.++++.+++|++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+   ....... .+...++   .++||.++ 
T Consensus       201 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g---~~~~~~~-~~~~~di---~t~sK~~~-  271 (429)
T 3k28_A          201 IACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVA---YNCGQGY-YGVTPDL---TCLGKVIG-  271 (429)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSS---TTHHHHH-HTCCCSE---EEECGGGG-
T ss_pred             EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC---cchHHHH-hCCCCce---ehhhhhhc-
Confidence            66666555566666655 5777999999999999999999999888 321   1122211 2222333   47999998 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      +|+|+||+++   ++++++.+... .......+.+++.+++.++...|+..+         ++..++++++++++.+.|+
T Consensus       272 ~G~~iG~~~~---~~~~~~~~~~~-~~~~~~~t~~~~~~a~aaa~aal~~~~---------~~~~~~~~~~~~~l~~~L~  338 (429)
T 3k28_A          272 GGLPVGAYGG---KAEIMRQVAPS-GPIYQAGTLSGNPLAMAAGYETLVQLT---------PESYVEFERKAEMLEAGLR  338 (429)
T ss_dssp             TTSCCEEEEE---CHHHHTTBTTT-SSBCCCCTTTTCHHHHHHHHHHHHTCC---------HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEE---cHHHHhhhccC-CCccccCCCCCChHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH
Confidence            5999999855   77754443211 001111223556677777766665432         2444555566666666555


Q ss_pred             hcc----CCCCCcccccCCcceeeecCC--------------C----HHHHHHhhhcCcEEEcCCC----eEEecCCCcc
Q 015283          340 AKD----KSGKDWSFILRQIGMFSFTGL--------------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSLA  393 (410)
Q Consensus       340 ~~~----g~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~~  393 (410)
                       ++    +.   .....+.+. |.++.+              +    .++...+++ +||.+.|++    |+++.. +++
T Consensus       339 -~~~~~~~~---~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~r~~~~~-t~e  411 (429)
T 3k28_A          339 -KAAEKHGI---PHHINRAGS-MIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVE-QGVFLPPSQFEGLFLSTVH-SDA  411 (429)
T ss_dssp             -HHHHHTTC---CCEEEEETT-EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTTSCBCCCTTC-CHH
T ss_pred             -HHHhhCCC---CEEEEeecc-EEEEEEecCCcccccccccccHHHHHHHHHHHHH-CCeEEecCCCCCEEEECCC-CHH
Confidence             43    31   122333333 333221              1    334556665 699999965    887655 999


Q ss_pred             cHHHHHHHHHHHhhhc
Q 015283          394 KCEYLADAIIDSYHNV  409 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++|+++++++
T Consensus       412 ~i~~~l~~l~~~l~~~  427 (429)
T 3k28_A          412 DIEATIAAAEIAMSKL  427 (429)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998765

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.95  E-value=1.1e-27  Score=226.18  Aligned_cols=323  Identities=13%  Similarity=0.012  Sum_probs=215.4

Q ss_pred             eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-C-cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-I-EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~-~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      +++|+.| |      ...++.+.+++.+.+.    +.|+. . .+..++|+++++++. .   +.+++++++  ++||++
T Consensus         5 ~~~~~~g-p------~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g-~---~~~~~~v~~--~~g~t~   67 (366)
T 1m32_A            5 YLLLTPG-P------LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT-A---SEGYTSVLL--QGSGSY   67 (366)
T ss_dssp             CEECSSS-S------CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC-S---SSSEEEEEE--ESCHHH
T ss_pred             cccccCC-C------cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC-C---CCcCcEEEE--ecChHH
Confidence            5777777 3      1236888888766431    22321 2 678999999999975 2   112357888  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcC-CCCcc-hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISS-PTWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~-p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ++.++..  ..+.+||+|++++ ++|+. +...+...|.+++.++.  ..++.+|++.+++.+++. .+++++++++|+|
T Consensus        68 a~~~~~~--~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~n  142 (366)
T 1m32_A           68 AVEAVLG--SALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDC--GEVARPDVQAIDAILNAD-PTISHIAMVHSET  142 (366)
T ss_dssp             HHHHHHH--HSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEEC--CTTSCCCHHHHHHHHHHC-TTCCEEEEESEET
T ss_pred             HHHHHHH--HhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcC-CCeEEEEEecccC
Confidence            9999843  3356999988776 66654 56677788999999987  345678999999999863 2356666789999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++   +++|.++|++||+++|+||+|...... .     .+    ...+.+++++|+||.++. +.++||+++  
T Consensus       143 ptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-~-----~~----~~~~~di~~~s~~K~~~~-~~g~G~~~~--  206 (366)
T 1m32_A          143 TTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGIP-M-----DI----AALHIDYLISSANKCIQG-VPGFAFVIA--  206 (366)
T ss_dssp             TTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTSC-C-----CT----TTTTCSEEEEESSSTTCC-CSSEEEEEE--
T ss_pred             CcceecC---HHHHHHHHHHcCCEEEEECCccccCcC-c-----cc----cccCccEEEecCcccccC-CCceEEEEE--
Confidence            9999888   668888899999999999998743321 1     11    122357889999998732 234699865  


Q ss_pred             CCchhHHHHHHH-----------HHhh-c-cCc-ccCCChhHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHH
Q 015283          272 SSSDLAARVKSQ-----------LKRL-A-RPM-YSNPPVHGARIVANVVGNPALFDEWKAE--MEMMAGRIKNVRQKLF  335 (410)
Q Consensus       272 ~~~~~~~~~~~~-----------~~~~-~-~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~l~  335 (410)
                       ++++++++...           .... . ... ..+++..++.++...++.      +.+.  +++.+++++++++++.
T Consensus       207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~~~~~~l~  279 (366)
T 1m32_A          207 -REQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKE------LAKEGGVAARHQRYQQNQRSLV  279 (366)
T ss_dssp             -EHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH------HHHHTHHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHH------HHHccCHhHHHHHHHHHHHHHH
Confidence             66644433210           0000 0 001 123444444444333331      1222  4678888999999999


Q ss_pred             HHhhhccCCCCCcccccC---CcceeeecCC------CHH-HHHHhhhcCcEEEcCCC-------eEEecCC-CcccHHH
Q 015283          336 DSLSAKDKSGKDWSFILR---QIGMFSFTGL------NKA-QSDNMTNKWHVYMTKDG-------RISLAGL-SLAKCEY  397 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~---~~~~~~~~~~------~~~-~~~~ll~~~gi~v~~~g-------Ris~~~~-~~~~i~~  397 (410)
                      +.|+ +++.    .+..+   .+++++|+.+      +.. +.+.+.+ +||.+.++.       |++++.. +++++++
T Consensus       280 ~~L~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~  353 (366)
T 1m32_A          280 AGMR-ALGF----NTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKE-QGFVIYPGKVSQSDCFRIGNIGEVYAADITA  353 (366)
T ss_dssp             HHHH-HTTC----CBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHH-TTEECEECCCSSSCEEEEECCSSCCHHHHHH
T ss_pred             HHHH-HCCC----eeccCchhcCceEEEEEcCccCCCCHHHHHHHHHH-CCEEEECCcCCCCCEEEEecCCCCCHHHHHH
Confidence            9998 7763    33332   3555655532      333 4556655 599998762       9998753 7899999


Q ss_pred             HHHHHHHHhhhc
Q 015283          398 LADAIIDSYHNV  409 (410)
Q Consensus       398 ~~~~l~~~l~~~  409 (410)
                      ++++|+++++++
T Consensus       354 ~~~~l~~~~~~~  365 (366)
T 1m32_A          354 LLTAIRTAMYWT  365 (366)
T ss_dssp             HHHHHHHHCTTC
T ss_pred             HHHHHHHHHHhc
Confidence            999999998765

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.95  E-value=1.3e-27  Score=227.97  Aligned_cols=316  Identities=11%  Similarity=0.074  Sum_probs=208.9

Q ss_pred             ccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC
Q 015283           51 PYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA  129 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd  129 (410)
                      ..+++.+.+++.+....   +.+. ......++++.+++++...     .++++++  ++||++++..+..  ..+.+||
T Consensus        32 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~--~~gg~~al~~~~~--~~~~~gd   99 (393)
T 3kgw_A           32 SNLAPRVLAAGSLRMIG---HMQKEMLQIMEEIKQGIQYVFQTR-----NPLTLVV--SGSGHCAMETALF--NLLEPGD   99 (393)
T ss_dssp             CCCCHHHHHHTTCCCCC---TTSHHHHHHHHHHHHHHHHHHTCC-----CSEEEEE--SCCTTTHHHHHHH--HHCCTTC
T ss_pred             CCCCHHHHHHhcccccC---cccHHHHHHHHHHHHHHHHHhCCC-----CCcEEEE--eCCcHHHHHHHHH--hcCCCCC
Confidence            33578888887664322   1111 1234568888888886432     1345888  9999999998843  3477999


Q ss_pred             EEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283          130 KVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD  207 (410)
Q Consensus       130 ~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~  207 (410)
                      +|+++.++|.+  +...++..|.+++.+++  ..++.+|++.+++.+++  .+++++++++|+||||.+++   +++|.+
T Consensus       100 ~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~~  172 (393)
T 3kgw_A          100 SFLTGTNGIWGMRAAEIADRIGARVHQMIK--KPGEHYTLQEVEEGLAQ--HKPVLLFLVHGESSTGVVQP---LDGFGE  172 (393)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTTHHH
T ss_pred             EEEEEeCCchhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHHHhh--CCCcEEEEeccCCcchhhcc---HHHHHH
Confidence            99999888743  36677788999999987  34457899999999975  24566777899999999887   557777


Q ss_pred             HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhh
Q 015283          208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL  287 (410)
Q Consensus       208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~  287 (410)
                      +|++||+++|+||+|...... .+         ....+.++++.|+||.++ ++.++||+++   ++++++.+.......
T Consensus       173 l~~~~~~~li~De~~~~g~~~-~~---------~~~~~~d~~~~s~sK~~~-~~~g~g~~~~---~~~~~~~~~~~~~~~  238 (393)
T 3kgw_A          173 LCHRYQCLLLVDSVASLGGVP-IY---------MDQQGIDIMYSSSQKVLN-APPGISLISF---NDKAKYKVYSRKTKP  238 (393)
T ss_dssp             HHHHTTCEEEEECTTTTTTSC-CC---------TTTTTCCEEEEESSSTTC-CCSSCEEEEE---CHHHHHHHHTCSSCC
T ss_pred             HHHHcCCEEEEECCccccCcc-cc---------hhhcCCCEEEecCccccc-CCCceeEEEE---CHHHHHHHhccCCCC
Confidence            799999999999997632211 11         112235688889999774 2344799765   777655543210000


Q ss_pred             -------------------ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          288 -------------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       288 -------------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                                         ......+++..++.++...++..     ..+.+++.+++++++++++.+.|+ +++.    
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g~----  308 (393)
T 3kgw_A          239 VSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALI-----AEQGLENCWRRHREATAHLHKHLQ-EMGL----  308 (393)
T ss_dssp             SCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HTTC----
T ss_pred             CceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHH-HcCC----
Confidence                               00111233444433333333211     012357888899999999999998 8763    


Q ss_pred             ccccC----CcceeeecC----CCH-HHHHHhhhcCcEEEcCCC--------eEEe-cC-CCcccHHHHHHHHHHHhhhc
Q 015283          349 SFILR----QIGMFSFTG----LNK-AQSDNMTNKWHVYMTKDG--------RISL-AG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       349 ~~~~~----~~~~~~~~~----~~~-~~~~~ll~~~gi~v~~~g--------Ris~-~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++..+    ..+.+.++.    .+. ++.+.+++++||.+.+|.        ||++ +. .+++++++++++|+++++++
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~  388 (393)
T 3kgw_A          309 KFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHC  388 (393)
T ss_dssp             CBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred             eeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhh
Confidence            33322    223344332    244 456677665599999852        9997 54 38899999999999998764

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.95  E-value=5.4e-28  Score=229.49  Aligned_cols=321  Identities=12%  Similarity=0.018  Sum_probs=208.6

Q ss_pred             ecCCCcccccHHHHHHHHHhhccCCC---ccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHH
Q 015283           45 RTEELQPYVLDVVKKAENLMLERGEN---KEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL  117 (410)
Q Consensus        45 ~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~  117 (410)
                      +|..+..++++.+.+++.+.+.....   ..|.    ......++++.+++++..      +++++++  ++||++++.+
T Consensus         4 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~------~~~~i~~--~~g~~~a~~~   75 (382)
T 4hvk_A            4 FDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG------GGGTVVF--TSGATEANNL   75 (382)
T ss_dssp             CBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTC------TTEEEEE--ESSHHHHHHH
T ss_pred             ecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCC------CcCeEEE--ECCchHHHHH
Confidence            44555555689999998887643110   1121    122344777777777532      2578988  9999999999


Q ss_pred             HHHHHHH--hCCCCEEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          118 AAALIER--YFPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       118 ~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +...+..  ..+||+|++++++|+.+...+.   ..|++++.+++.  +++.+|++++++.+.+   +++++++++|+||
T Consensus        76 ~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~~~np  150 (382)
T 4hvk_A           76 AIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRD---DTILVSVQHANNE  150 (382)
T ss_dssp             HHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCT---TEEEEECCSBCTT
T ss_pred             HHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhcc---CceEEEEECCCCC
Confidence            8543311  1799999999999998876554   469999999873  5567999999999875   7788999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+.+   +++|.++|++||+ +|+|++|.....   ..   .+.    ..+.++++.|+||.+|++|  +|++++   
T Consensus       151 tG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~~---~~---~~~----~~~~d~~~~s~~K~~g~~g--~g~~~~---  211 (382)
T 4hvk_A          151 IGTIQP---VEEISEVLAGKAA-LHIDATASVGQI---EV---DVE----KIGADMLTISSNDIYGPKG--VGALWI---  211 (382)
T ss_dssp             TCBBCC---HHHHHHHHSSSSE-EEEECTTTBTTB---CC---CHH----HHTCSEEEEESGGGTSCTT--CEEEEE---
T ss_pred             ceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCCC---CC---Cch----hcCCCEEEEeHHHhcCCCc--eEEEEE---
Confidence            999877   5577788999999 999999653221   11   111    1135688999999887666  577643   


Q ss_pred             CchhHHHHHHHHHh---hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283          273 SSDLAARVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS  349 (410)
Q Consensus       273 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~  349 (410)
                      +++.  .+......   ........++...+.++...+.   +   ..+.+++.+++++++++++.+.|+ +++.   +.
T Consensus       212 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---~---~~~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~  279 (382)
T 4hvk_A          212 RKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAE---I---TAMEWREEAERLRRLRDRIIDNVL-KIEE---SY  279 (382)
T ss_dssp             ETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH---H---HHHHHHHHHHHHHHHHHHHHHHHT-TSTT---EE
T ss_pred             cCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHH---H---HHhhHHHHHHHHHHHHHHHHHHHh-cCCC---eE
Confidence            2221  11110000   0000111233333333333332   1   134567888999999999999998 7731   34


Q ss_pred             cccCCc---ceeee---cCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCcccH
Q 015283          350 FILRQI---GMFSF---TGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSLAKC  395 (410)
Q Consensus       350 ~~~~~~---~~~~~---~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~~~i  395 (410)
                      +..+..   +.+++   .+.+.+.+.+.+.++||.+.+|                         +  ||+++. .+++++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i  359 (382)
T 4hvk_A          280 LNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDV  359 (382)
T ss_dssp             ECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHH
T ss_pred             EeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHH
Confidence            433332   11222   2445555444445579999864                         3  999874 478999


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      ++++++|+++++++
T Consensus       360 ~~~~~~l~~~~~~~  373 (382)
T 4hvk_A          360 DRLLEVLPGVIERL  373 (382)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988653

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.95  E-value=1.8e-27  Score=227.45  Aligned_cols=327  Identities=13%  Similarity=0.057  Sum_probs=202.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|++.|.+....|+.  +|.+.+++.+.+.... +.|  .+.....++++.+++++    +    .+++++  ++||
T Consensus        36 ~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----~----~~~v~~--~~gg  102 (395)
T 3nx3_A           36 KKYLDFSSGIGVCALGYN--HAKFNAKIKAQVDKLL-HTSNLYYNENIAAAAKNLAKAS----A----LERVFF--TNSG  102 (395)
T ss_dssp             CEEEESSHHHHTCTTCBS--CHHHHHHHHHHHTTCS-CCCTTSBCHHHHHHHHHHHHHH----T----CSEEEE--ESSH
T ss_pred             CEEEECCCcHHhccCCCC--CHHHHHHHHHHHHhcc-ccccccCCHHHHHHHHHHHHhc----C----CCeEEE--eCCH
Confidence            468999988653444543  6899999988875422 212  12333455555565553    2    478999  9999


Q ss_pred             hhHHHHHHHHHHHh-----CCCCEEEEcCCCCcchhhhhhhCCC-------------CccceeeecCCCcccChhhHHHH
Q 015283          112 TGSLRLAAALIERY-----FPGAKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus       112 t~a~~~~~~~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                      ++++..+.+++...     .++|+|++++|+|.++.......+.             ++..++.       .|++++++.
T Consensus       103 ~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  175 (395)
T 3nx3_A          103 TESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKL  175 (395)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHh
Confidence            99999987655444     5679999999999877544333322             2222222       278888888


Q ss_pred             HhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283          174 IKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS  252 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  252 (410)
                      +++   +++++++.+++|++|.. ++.+++++|.++|++||+++|+||+|.+|+..+   ..+.... .+...+   +.|
T Consensus       176 l~~---~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g---~~~~~~~-~~~~~d---~~t  245 (395)
T 3nx3_A          176 VNE---KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSG---KFFAYEH-AQILPD---IMT  245 (395)
T ss_dssp             CCT---TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGG-GTCCCS---EEE
T ss_pred             ccC---CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCC---cchhHHh-cCCCCC---EEE
Confidence            864   56677766677777776 678889999999999999999999999886432   1111111 111122   347


Q ss_pred             ccccccccCCCcceEEEEeCCchh-HHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          253 YSKNLGLYAERIGAMNVVCSSSDL-AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       253 ~sK~~~~~G~r~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      +||.++ +|+|+||+++   ++++ ++.    +.......+.+.+.+++.++...|+...-    .+..++.++..+..+
T Consensus       246 ~sK~~~-~G~~~G~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~aa~aal~~~~~----~~~~~~~~~~~~~~~  313 (395)
T 3nx3_A          246 SAKALG-CGLSVGAFVI---NQKVASNS----LEAGDHGSTYGGNPLVCAGVNAVFEIFKE----EKILENVNKLTPYLE  313 (395)
T ss_dssp             ECGGGT-TTSCCEEEEE---CHHHHHHH----SCTTCCSSCBSCCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHH
T ss_pred             eccccc-CCCceEEEEE---chhhhhhh----cCCcccCCCCCCCHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHH
Confidence            899998 4999999855   7774 333    33322222334566666666555442100    011223333333333


Q ss_pred             HHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHH
Q 015283          332 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADA  401 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~  401 (410)
                      +.+.+.+. ..+.   +....+ .+.|.++.+    +. ++...+++ +||.+.+++    ||+++. .+++++++++++
T Consensus       314 ~~l~~~~~-~~~~---~~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~  387 (395)
T 3nx3_A          314 QSLDELIN-EFDF---CKKRKG-LGFMQGLSLDKSVKVAKVIQKCQE-NALLLISCGENDLRFLPPLILQKEHIDEMSEK  387 (395)
T ss_dssp             HHHHHHHH-HCTT---EEEEEE-ETTEEEEEECTTSCHHHHHHHHHH-TTEECEEETTTEEEECCCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHH-hCCC---eEEEEe-EEEEEEEEeCCcchHHHHHHHHHH-CCCEEecCCCCEEEEECCCCCCHHHHHHHHHH
Confidence            33333333 3331   222223 345555432    33 34556655 699999875    887543 389999999999


Q ss_pred             HHHHhhh
Q 015283          402 IIDSYHN  408 (410)
Q Consensus       402 l~~~l~~  408 (410)
                      |++++++
T Consensus       388 l~~~l~~  394 (395)
T 3nx3_A          388 LRKALKS  394 (395)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9999875

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.95  E-value=1.6e-27  Score=228.79  Aligned_cols=313  Identities=11%  Similarity=0.014  Sum_probs=210.3

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCC
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFP  127 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~  127 (410)
                      ..+++.+.+++.+...    ..|.+  .....++++.+++++...      .+ .+++  ++||++++..+..  ..+.+
T Consensus        22 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~~~~------~~~~v~~--~~sgt~al~~~~~--~~~~~   87 (411)
T 3nnk_A           22 INADPRVLRAMSSQLI----GQYDPAMTHYMNEVMALYRGVFRTE------NRWTMLV--DGTSRAGIEAILV--SAIRP   87 (411)
T ss_dssp             CCCCHHHHHHHTSCCC----CTTCHHHHHHHHHHHHHHHHHHTCC------CSEEEEE--ESCHHHHHHHHHH--HHCCT
T ss_pred             CCCCHHHHHHhhcccc----ccccHHHHHHHHHHHHHHHHHhCCC------CCcEEEE--CCCcHHHHHHHHH--HhcCC
Confidence            3457899888876432    12211  133567888888886432      33 3667  8899999999843  34789


Q ss_pred             CCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283          128 GAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI  205 (410)
Q Consensus       128 gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i  205 (410)
                      ||+|+++.|+|.+  +...++..|.+++.+++  +.++.+|++.+++.+++  .+++++++++|+||||.+.+   +++|
T Consensus        88 gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i  160 (411)
T 3nnk_A           88 GDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV--PWGEVFTPDQVEDAVKR--IRPRLLLTVQGDTSTTMLQP---LAEL  160 (411)
T ss_dssp             TCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTTH
T ss_pred             CCEEEEecCCchHHHHHHHHHHcCCeEEEEec--CCCCCCCHHHHHHHHhh--CCCeEEEEeCCCCCcceecc---HHHH
Confidence            9999999999977  88888899999999988  45677899999999975  24566777899999999877   5577


Q ss_pred             HHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHH-
Q 015283          206 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL-  284 (410)
Q Consensus       206 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~-  284 (410)
                      .++|++||+++|+|+++...... .+         ....+.++++.|++|.++ ++.++||+++   ++++++++.... 
T Consensus       161 ~~l~~~~~~~li~Dea~~~~~~~-~~---------~~~~~~d~~~~s~~K~l~-~~~g~g~~~~---~~~~~~~~~~~~~  226 (411)
T 3nnk_A          161 GEICRRYDALFYTDATASLGGNP-LE---------TDVWGLDAVSAGMQKCLG-GPSGTSPITL---SARMEEAIRRRKC  226 (411)
T ss_dssp             HHHHHHHTCEEEEECTTTBTTBC-CC---------TTTTTCSEEECCSTTTTC-CCSSEEEEEE---CHHHHHHHHTTCC
T ss_pred             HHHHHHcCCEEEEECCcccCCcc-cc---------hhccCCcEEEecCccccC-CCCceEEEEE---CHHHHHHHhhccc
Confidence            77799999999999996532211 11         112235788999999753 2345799865   777665554321 


Q ss_pred             ---------------H----------------hhccCcccCCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHH
Q 015283          285 ---------------K----------------RLARPMYSNPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQ  332 (410)
Q Consensus       285 ---------------~----------------~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~  332 (410)
                                     .                ........+++..++.++...++.      +.+. +++.+++++++++
T Consensus       227 ~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~~~~  300 (411)
T 3nnk_A          227 VEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARL------ILQEGLDYGIARHKLHGD  300 (411)
T ss_dssp             CCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHH------HHHhhHHHHHHHHHHHHH
Confidence                           0                000011123334333333333321      1222 5788889999999


Q ss_pred             HHHHHhhhccCCCCCcccccCCc---ceeeec----CCCHH-HHHHhhhcCcEEEcCC------C--eEEe-cC-CCccc
Q 015283          333 KLFDSLSAKDKSGKDWSFILRQI---GMFSFT----GLNKA-QSDNMTNKWHVYMTKD------G--RISL-AG-LSLAK  394 (410)
Q Consensus       333 ~l~~~l~~~~g~~~~~~~~~~~~---~~~~~~----~~~~~-~~~~ll~~~gi~v~~~------g--Ris~-~~-~~~~~  394 (410)
                      ++.+.|+ ++++    .+..+..   +.+.++    +.+.+ +.+.+++++||.+.++      +  ||++ +. .++++
T Consensus       301 ~l~~~L~-~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~  375 (411)
T 3nnk_A          301 ALVKGIQ-AMGL----ETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDC  375 (411)
T ss_dssp             HHHHHHH-HTTC----CBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHH
T ss_pred             HHHHHHH-HcCC----EeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHH
Confidence            9999998 8763    3333322   334443    23444 4566666669999875      2  9997 53 37899


Q ss_pred             HHHHHHHHHHHhhhc
Q 015283          395 CEYLADAIIDSYHNV  409 (410)
Q Consensus       395 i~~~~~~l~~~l~~~  409 (410)
                      +++++++|+++++++
T Consensus       376 i~~~~~~l~~~l~~~  390 (411)
T 3nnk_A          376 VMTTLSALEAVLNYL  390 (411)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHc
Confidence            999999999998754

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.95  E-value=1.1e-26  Score=224.35  Aligned_cols=343  Identities=9%  Similarity=-0.003  Sum_probs=213.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC---ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN---KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+|+..|.+....|+  .+|.+.+++.+.+.....   ..|. .....++++.+++++.      +.+++|++  ++|
T Consensus        43 ~~ylD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~~------~~~~~v~~--~~g  111 (429)
T 1s0a_A           43 RRLVDGMSSWWAAIHGY--NHPQLNAAMKSQIDAMSHVMFGGIT-HAPAIELCRKLVAMTP------QPLECVFL--ADS  111 (429)
T ss_dssp             CEEEESSTTTTTCTTCB--SCHHHHHHHHHHHHHCSCCCCSSEE-CHHHHHHHHHHHHHSC------TTCCEEEE--ESS
T ss_pred             CEEEEcCccHhhccCCC--CCHHHHHHHHHHHHhcccccccccC-CHHHHHHHHHHHHhCC------CCCCEEEE--eCC
Confidence            35678877764122333  368899998887754211   2342 3345678888888753      13689999  999


Q ss_pred             hhhHHHHHHHHHHHh-C----CCCEEEEcCCCCcchhhhhh-hCC-------------CCccceeeec---CCCc-ccCh
Q 015283          111 GTGSLRLAAALIERY-F----PGAKVLISSPTWGNHKNIFN-DAR-------------VPWSEYRYYD---PKTV-GLDF  167 (410)
Q Consensus       111 gt~a~~~~~~~~~~~-~----~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~---~~~~-~~d~  167 (410)
                      |++++..+++.+..+ .    |||+|++++|+|.++..... ..|             ..+..++...   .+.+ .+|+
T Consensus       112 gtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  191 (429)
T 1s0a_A          112 GSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDM  191 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGG
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHH
Confidence            999999986654322 2    58999999999987644222 111             1233444321   0123 4799


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCC-CCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          168 EGMIADIKAAPGGSFILLHGCA-HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      +.+++.+++.++++++++++.+ +||||. +.+.+++++|.++|++||+++|+||+|.+|+..+   ....+.. .....
T Consensus       192 ~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g---~~~~~~~-~~~~~  267 (429)
T 1s0a_A          192 VGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTG---KLFACEH-AEIAP  267 (429)
T ss_dssp             HHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGG-GTCCC
T ss_pred             HHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccc---hHHHhhh-cCCCC
Confidence            9999988743235666665555 799996 5578889999999999999999999998886432   1111111 12223


Q ss_pred             cEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH-HhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL-KRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      +++   |+||.++ +| +|+||+++   ++++++.+.... .......+.+++.+++.++...|+..      .+  +..
T Consensus       268 d~~---t~sK~l~-~G~~~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~------~~--~~~  332 (429)
T 1s0a_A          268 DIL---CLGKALT-GGTMTLSATLT---TREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAIL------ES--GDW  332 (429)
T ss_dssp             SEE---EECGGGG-TSSSCCEEEEE---CHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHH------HT--CHH
T ss_pred             CEE---Eeccccc-CCCccceEEEe---CHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHH------Hh--CCH
Confidence            433   7899998 68 99999865   677555443210 00011122344566665554444311      00  134


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC---eEEec-CCCccc
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RISLA-GLSLAK  394 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g---Ris~~-~~~~~~  394 (410)
                      .++++++++++.+.|+ +++....+....+. |.|+|+.+    +. ++...+++ +||.+.+.+   ||+++ ..++++
T Consensus       333 ~~~~~~~~~~l~~~L~-~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~~iRis~~~~~t~e~  409 (429)
T 1s0a_A          333 QQQVADIEVQLREQLA-PARDAEMVADVRVL-GAIGVVETTHPVNMAALQKFFVE-QGVWIRPFGKLIYLMPPYIILPQQ  409 (429)
T ss_dssp             HHHHHHHHHHHHHHHG-GGGGCTTEEEEEEE-TTEEEEEESSCBCHHHHHHHHHH-TTEECCCBTTEEEECCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHH-HHhcCCCEEEEEEe-eEEEEEEECCcccHHHHHHHHHH-CCCEEeccCCEEEEECCCCCCHHH
Confidence            5667777888888887 65310112223333 45666533    33 34566665 699999864   99854 248999


Q ss_pred             HHHHHHHHHHHhhhc
Q 015283          395 CEYLADAIIDSYHNV  409 (410)
Q Consensus       395 i~~~~~~l~~~l~~~  409 (410)
                      +++++++|+++++++
T Consensus       410 i~~~~~~l~~~~~~~  424 (429)
T 1s0a_A          410 LQRLTAAVNRAVQDE  424 (429)
T ss_dssp             HHHHHHHHHHHTSSG
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999987653

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.95  E-value=6.2e-27  Score=224.41  Aligned_cols=324  Identities=13%  Similarity=0.021  Sum_probs=213.7

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---CccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      +.+.|..+.+      +++++.+.+++.+.+....   ...|.    ...+..++++++++++..      ++++|++  
T Consensus        26 ~~~~ld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--   91 (406)
T 3cai_A           26 GWVHFDAPAG------MLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNA------DPGGVVL--   91 (406)
T ss_dssp             SCEECBGGGC------CCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTC------CGGGEEE--
T ss_pred             CeEEEeCCCc------CCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--
Confidence            3567776654      3447889999888764311   12242    245678999999999743      2578999  


Q ss_pred             cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhh----CCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283          108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF  182 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~  182 (410)
                      ++|+++++.++...+. .+.+||+|+++.|+|..+...+..    .|.+++.+++. .+++.+|++++++.+++   +++
T Consensus        92 ~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~l~~---~~~  167 (406)
T 3cai_A           92 GADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVD-IETGELPTWQWESLISK---STR  167 (406)
T ss_dssp             ESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCC-TTTCCCCGGGHHHHCCT---TEE
T ss_pred             eCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecC-cccCCcCHHHHHHHhCC---Cce
Confidence            9999999998743221 256999999999999987655543    68999999874 24567899999999874   678


Q ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      ++++++|+||||.+.+   +++|.++|+++|+++|+|++|.....   ..   .+..    .+.++++.|+||.+| ++ 
T Consensus       168 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~---~~---~~~~----~~~d~~~~s~~K~~g-~~-  232 (406)
T 3cai_A          168 LVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYR---LL---DIRE----TDADVVTVNAHAWGG-PP-  232 (406)
T ss_dssp             EEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTC---CC---CHHH----HCCSEEEEEGGGGTS-CS-
T ss_pred             EEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCC---CC---Cchh----cCCCEEEeehhhhcC-CC-
Confidence            8888999999999887   56777889999999999999864221   11   1111    135788999999876 44 


Q ss_pred             Ccc-eEEEEeCCchhHHHHHHHHHhhcc--------Cc-ccCCChhHHHHHHHHh---CChh------hHHHHHHHHHHH
Q 015283          263 RIG-AMNVVCSSSDLAARVKSQLKRLAR--------PM-YSNPPVHGARIVANVV---GNPA------LFDEWKAEMEMM  323 (410)
Q Consensus       263 r~G-~l~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~a~~~l---~~~~------~~~~~~~~~~~~  323 (410)
                       +| |+++   ++++++++    .....        .. ..+++..++.++...+   .+..      ....|.+++++.
T Consensus       233 -~G~~~~~---~~~~~~~l----~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~  304 (406)
T 3cai_A          233 -IGAMVFR---DPSVMNSF----GSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSA  304 (406)
T ss_dssp             -CEEEEES---CHHHHHTS----CCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHH
T ss_pred             -cCeEEEE---ehHHHhhc----CCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHH
Confidence             78 8743   66644332    22210        01 1223333332222222   2100      011233356788


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCC---cceeeec---CCCHHH-HHHhhhcCcEEEcCC--------------
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ---IGMFSFT---GLNKAQ-SDNMTNKWHVYMTKD--------------  382 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~---~~~~~~~---~~~~~~-~~~ll~~~gi~v~~~--------------  382 (410)
                      +++++++++++.+.|+ +++.   +.+..+.   ++ ++++   +.+.+. .+.+ .++||.+.++              
T Consensus       305 ~~~~~~~~~~l~~~L~-~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~  378 (406)
T 3cai_A          305 DAYLNRVFDYLMVSLR-SLPL---VMLIGRPEAQIP-VVSFAVHKVPADRVVQRL-ADNGILAIANTGSRVLDVLGVNDV  378 (406)
T ss_dssp             HHHHHHHHHHHHHHHH-TCTT---EEECCCCSSBCS-EEEEEETTBCHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHHHHh-cCCC---eEEcCCccccCC-EEEEEECCcCHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCC
Confidence            8899999999999998 7631   3444332   33 3333   334444 4455 4579998753              


Q ss_pred             -C--eEEecC-CCcccHHHHHHHHHHH
Q 015283          383 -G--RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       383 -g--Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                       +  ||+++. .+++++++++++|+++
T Consensus       379 ~~~iRis~~~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          379 GGAVTVGLAHYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             TCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             CCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence             3  999875 3788999999998764

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.95  E-value=3.6e-27  Score=221.46  Aligned_cols=311  Identities=12%  Similarity=-0.001  Sum_probs=208.3

Q ss_pred             ccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC
Q 015283           51 PYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA  129 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd  129 (410)
                      .++++.+.+++.+.+..   +.|. ...+..++|+++++++...    .+++++++  |+||++++.++.   ..+.+ |
T Consensus         9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~----~~~~~v~~--t~g~t~a~~~~~---~~~~~-d   75 (353)
T 2yrr_A            9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFDPG----EGALVAAL--AGSGSLGMEAGL---ANLDR-G   75 (353)
T ss_dssp             CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHCCC----TTCEEEEE--SSCHHHHHHHHH---HTCSC-C
T ss_pred             CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhCCC----CCCceEEE--cCCcHHHHHHHH---HHhcC-C
Confidence            34578899888776643   2232 2356789999999997432    23577988  999999999873   23334 8


Q ss_pred             EEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283          130 KVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD  207 (410)
Q Consensus       130 ~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~  207 (410)
                      +|++++|+|.++  ...++..|.+++.+++.  +++.+|++.+++.+++.  +++++++++|+||||.+++   +++|.+
T Consensus        76 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---~~~i~~  148 (353)
T 2yrr_A           76 PVLVLVNGAFSQRVAEMAALHGLDPEVLDFP--PGEPVDPEAVARALKRR--RYRMVALVHGETSTGVLNP---AEAIGA  148 (353)
T ss_dssp             CEEEEECSHHHHHHHHHHHHTTCCEEEEECC--TTSCCCHHHHHHHHHHS--CCSEEEEESEETTTTEECC---HHHHHH
T ss_pred             cEEEEcCCCchHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHHhC--CCCEEEEEccCCCcceecC---HHHHHH
Confidence            999999998875  45567789999999883  45678999999998752  4556677999999999887   557888


Q ss_pred             HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHH-----
Q 015283          208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVK-----  281 (410)
Q Consensus       208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~-----  281 (410)
                      +|++||+++|+|++|. ++..  ..   .+..+    +.++++.|++|.+ +++|  +||+++   +++.++++.     
T Consensus       149 l~~~~~~~li~D~a~~-~~~~--~~---~~~~~----~~d~~~~s~~K~~~~~~g--~G~~~~---~~~~~~~l~~~~~~  213 (353)
T 2yrr_A          149 LAKEAGALFFLDAVTT-LGML--PF---SMRAM----GVDYAFTGSQKCLSAPPG--LAPIAA---SLEARKAFTGKRGW  213 (353)
T ss_dssp             HHHHHTCEEEEECTTT-TTTS--CC---CHHHH----TCSEEECCTTSTTCCCSS--CEEEEE---CHHHHHHCCCCSCS
T ss_pred             HHHHcCCeEEEEcCcc-cccc--cc---ccccc----CceEEEecCcccccCCCc--eEEEEE---CHHHHHHhccCCCc
Confidence            8999999999999985 3321  11   12111    2457888999965 5455  699865   777655543     


Q ss_pred             -----HHHHhh-ccCcccCCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          282 -----SQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       282 -----~~~~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                           ...... ......+++...+.++...++.      +.+. +++.+++++++++++.+.|+ ++|    +++..+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~  282 (353)
T 2yrr_A          214 YLDLARVAEHWERGGYHHTTPVLLHYALLEALDL------VLEEGVAARERRAREVYAWVLEELK-ARG----FRPYPKA  282 (353)
T ss_dssp             TTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHHHHHHHHHH-HTT----CEESCSS
T ss_pred             cccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHH------HHHhhHHHHHHHHHHHHHHHHHHHH-HCC----CccccCc
Confidence                 000000 1111223444444443333321      1222 56788899999999999998 775    3444332


Q ss_pred             --cceeeecC----CCHH-HHHHhhhcCcEEEcCC------C--eEEec-CCCcccHH-HHHHHHHHHhhh
Q 015283          355 --IGMFSFTG----LNKA-QSDNMTNKWHVYMTKD------G--RISLA-GLSLAKCE-YLADAIIDSYHN  408 (410)
Q Consensus       355 --~~~~~~~~----~~~~-~~~~ll~~~gi~v~~~------g--Ris~~-~~~~~~i~-~~~~~l~~~l~~  408 (410)
                        .++++++.    .+.+ +.+.+.+ +||.+.++      +  |+++. ..++++++ +++++|+++++.
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~  352 (353)
T 2yrr_A          283 SPLPTVLVVRPPEGVDADRLVRALYA-EGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL  352 (353)
T ss_dssp             SBCTTEEEEECCTTCCHHHHHHHHHH-TTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred             cCCCeEEEEECCCCCCHHHHHHHHHH-CCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence              44444443    2444 4556655 59999865      2  99983 35889999 999999998764

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.95  E-value=6.1e-27  Score=225.11  Aligned_cols=312  Identities=11%  Similarity=0.032  Sum_probs=207.7

Q ss_pred             cccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceE-EEecCChhhHHHHHHHHHHHhCCC
Q 015283           52 YVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVA-TVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        52 ~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~-~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      .+++.+.+++.+..    ...|.+  .....++++.+++++...      +++++ +  ++||++++..+..  ..+.+|
T Consensus        21 ~~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~g~~------~~~~~~~--~~s~t~al~~~~~--~l~~~g   86 (416)
T 3isl_A           21 EVDPRVLRVMSTPV----VGQFDPAFTGIMNETMEMLRELFQTK------NRWAYPI--DGTSRAGIEAVLA--SVIEPE   86 (416)
T ss_dssp             CCCHHHHHHTTSCC----CCTTSHHHHHHHHHHHHHHHHHTTCC------CSEEEEE--ESCHHHHHHHHHH--HHCCTT
T ss_pred             CcCHHHHHHhcccC----CCCccHHHHHHHHHHHHHHHHHhCCC------CCcEEEe--cCcHHHHHHHHHH--HhcCCC
Confidence            34677777665522    122321  334667888888885422      44444 6  7889999999843  347899


Q ss_pred             CEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          129 AKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       129 d~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      |+|++++|+|.+  +...++..|.+++.+++.  .++.+|++++++.+++  ++++++++++|+||||.+.+   +++|.
T Consensus        87 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~  159 (416)
T 3isl_A           87 DDVLIPIYGRFGYLLTEIAERYGANVHMLECE--WGTVFDPEDIIREIKK--VKPKIVAMVHGETSTGRIHP---LKAIG  159 (416)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CHHHH
T ss_pred             CEEEEecCCcccHHHHHHHHhcCCeeEEEecC--CCCCCCHHHHHHHHhh--CCCcEEEEEccCCCCceecC---HHHHH
Confidence            999999999987  677788899999999973  4567899999999973  25667777999999999877   66788


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHH--
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL--  284 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~--  284 (410)
                      ++|++||+++|+|++|...... .+.         ...+.++++.|++|.++ ++.++|++++   ++++++++....  
T Consensus       160 ~l~~~~~~~li~D~a~~~~~~~-~~~---------~~~~~d~~~~s~~K~l~-g~~g~g~~~~---~~~~~~~~~~~~~~  225 (416)
T 3isl_A          160 EACRTEDALFIVDAVATIGGCE-VKV---------DEWKIDAAIGGTQKCLS-VPSGMAPITY---NERVADVIAARKKV  225 (416)
T ss_dssp             HHHHHTTCEEEEECTTTTTTSC-CCT---------TTTTCSEEECCSSSTTC-CCSSEEEEEE---CHHHHHHHHTC---
T ss_pred             HHHHHcCCEEEEECCccccCCC-cch---------hhcCCCEEEecCccccC-CCCCeEEEEE---CHHHHHHhhccccc
Confidence            8899999999999997633321 111         12235788999999743 2345789765   777666654210  


Q ss_pred             -----------------------------Hh--hccCccc-CCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHH
Q 015283          285 -----------------------------KR--LARPMYS-NPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVR  331 (410)
Q Consensus       285 -----------------------------~~--~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~  331 (410)
                                                   ..  ....... +++..++.++...++.      +.+. +++.++++++++
T Consensus       226 ~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~~~  299 (416)
T 3isl_A          226 ERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRL------VLEEGLETRFERHRHHE  299 (416)
T ss_dssp             ---------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHH
T ss_pred             cccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH------HHHhhHHHHHHHHHHHH
Confidence                                         00  0011112 3344443333333321      1222 578889999999


Q ss_pred             HHHHHHhhhccCCCCCcccccCCc---ceeeec----CCCH-HHHHHhhhcCcEEEcCC------C--eEEecC-CCccc
Q 015283          332 QKLFDSLSAKDKSGKDWSFILRQI---GMFSFT----GLNK-AQSDNMTNKWHVYMTKD------G--RISLAG-LSLAK  394 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~~~~~---~~~~~~----~~~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~  394 (410)
                      +++.+.|+ +.|    +.+..+..   +.+.++    +.+. ++.+.+++++||.+.++      +  ||++.. .++++
T Consensus       300 ~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e  374 (416)
T 3isl_A          300 AALAAGIK-AMG----LRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKE  374 (416)
T ss_dssp             HHHHHHHH-HTT----CCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHH
T ss_pred             HHHHHHHH-HcC----CEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHH
Confidence            99999998 776    34444432   334333    2344 44666666569999875      1  999843 36666


Q ss_pred             -HHHHHHHHHHHhhhc
Q 015283          395 -CEYLADAIIDSYHNV  409 (410)
Q Consensus       395 -i~~~~~~l~~~l~~~  409 (410)
                       +++++++|+++++++
T Consensus       375 ~i~~~~~~l~~~~~~~  390 (416)
T 3isl_A          375 NVLFVLAGLEAVLLRH  390 (416)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHc
Confidence             999999999998764

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.95  E-value=1.6e-26  Score=225.05  Aligned_cols=348  Identities=13%  Similarity=0.052  Sum_probs=211.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|......|+.  +|.+.+++.+++.... +.|....+..+.++++++++....+  .+.+++++  ++||++
T Consensus        51 ~~~lD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~gGse  123 (460)
T 3gju_A           51 RKSIDAFAGLYCVNVGYG--RQKIADAIATQAKNLA-YYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYF--GLSGSD  123 (460)
T ss_dssp             CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHHHHS-CCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEE--ESSHHH
T ss_pred             CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHhhCC--CCcCEEEE--eCchHH
Confidence            467899888543345554  5889999888775422 2233333444455555555443322  23578999  999999


Q ss_pred             HHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCC-------------CCccceeeec---CCCcccC-----
Q 015283          114 SLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDAR-------------VPWSEYRYYD---PKTVGLD-----  166 (410)
Q Consensus       114 a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~---~~~~~~d-----  166 (410)
                      |++.+++++...      .+++.|++.+|+|.++.......+             ..+..++...   .++.+.+     
T Consensus       124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~  203 (460)
T 3gju_A          124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS  203 (460)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence            999997666543      356999999999987654333221             1223333210   0111222     


Q ss_pred             ---hhhHHHHHhcC-CCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh
Q 015283          167 ---FEGMIADIKAA-PGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA  241 (410)
Q Consensus       167 ---~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~  241 (410)
                         ++.+++.+.+. +++++++++.+++|++|. +++.+.+++|.++|++||+++|+||+|.+|+..+   ..+.... .
T Consensus       204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g---~~~~~~~-~  279 (460)
T 3gju_A          204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLG---TMFGSDH-Y  279 (460)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSCHHHH-H
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---ccchHhh-c
Confidence               57888887632 135677776777888887 6678889999999999999999999999887432   1222222 2


Q ss_pred             hcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH---HhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283          242 TRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KRLARPMYSNPPVHGARIVANVVGNPALFDEWK  317 (410)
Q Consensus       242 ~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~  317 (410)
                      +..++++   +|||.++ +| +|+||+++   ++++++.+....   .......+.+.+.+++.++...|+..+-    .
T Consensus       280 ~~~pdi~---t~sK~l~-gG~~~lg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~  348 (460)
T 3gju_A          280 GIKPDLI---TIAKGLT-SAYAPLSGVIV---ADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE----M  348 (460)
T ss_dssp             TCCCSEE---EECGGGT-TTSSCCEEEEE---EHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH----T
T ss_pred             CCCCCee---eeehhhc-CCCCCeEEEEE---CHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh----c
Confidence            2223433   7899997 45 89999755   778666654321   1112222334566666666555542110    1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------------CHHHHHHhhhcCcEEEcC
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------------NKAQSDNMTNKWHVYMTK  381 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ll~~~gi~v~~  381 (410)
                      +..++.++..+..++.+.+.+. +.+.   +....+. |.|.++.+                ..++...+++ +||.+.|
T Consensus       349 ~~~~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~  422 (460)
T 3gju_A          349 DLVTNAGETGAYFRAELAKAVG-GHKN---VGEVRGD-GMLAAVEFVADKDDRVFFDASQKIGPQVATALAA-SGVIGRA  422 (460)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHT-TSTT---EEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTEECEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHh-cCCC---eEEEeee-eEEEEEEEccCccccccccchHHHHHHHHHHHHH-CCeEEec
Confidence            1234555555555666656565 5442   2333343 33433321                1134556665 5999988


Q ss_pred             CC-----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          382 DG-----RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       382 ~g-----Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++     ||+++ ..+++++++++++|+++++++
T Consensus       423 ~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  456 (460)
T 3gju_A          423 MPQGDILGFAPPLCLTREQADIVVSKTADAVKSV  456 (460)
T ss_dssp             CSSSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            64     88844 248999999999999998753

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.95  E-value=1e-26  Score=223.92  Aligned_cols=326  Identities=15%  Similarity=0.085  Sum_probs=208.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|..-+..|+  .+|.+.+++.+++.....  ..| +.....++++.+++++    +    .+++++  ++||
T Consensus        57 ~~~lD~~~~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~gg  123 (420)
T 2pb2_A           57 KEYIDFAGGIAVTALGH--CHPALVEALKSQGETLWHTSNVF-TNEPALRLGRKLIDAT----F----AERVLF--MNSG  123 (420)
T ss_dssp             CEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCCCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEE--ESSH
T ss_pred             CEEEEccccccccccCC--CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCeEEE--eCCH
Confidence            45788888753223344  268899998888754211  123 3334456666666663    2    478999  9999


Q ss_pred             hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCCC------------ccceeeecCCCcccChhhHHH
Q 015283          112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~~  172 (410)
                      ++|++.+.+++..+.     +| ++|++++|+|.++.. .+...|.+            +..++.       .|++.+++
T Consensus       124 teA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~  196 (420)
T 2pb2_A          124 TEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKA  196 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHH
Confidence            999999866553321     56 599999999987644 33444543            122221       37899999


Q ss_pred             HHhcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          173 DIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       173 ~i~~~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      .+.+   +++++++++++|++|. +++.+++++|.++|++||+++|+||+|.+++..+   ..+.+.. .+...+++   
T Consensus       197 ~i~~---~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g---~~~~~~~-~~~~~dii---  266 (420)
T 2pb2_A          197 VMDD---HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTG---DLFAYMH-YGVTPDIL---  266 (420)
T ss_dssp             HCCT---TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHH-HTCCCSEE---
T ss_pred             Hhcc---CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCC---cHHHHHh-cCCCCCeE---
Confidence            8874   6778887888888884 5899999999999999999999999998876432   2222222 22233444   


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      ||||.++ +|+|+||+++   ++++++.+..    .....+.+++.+++.++...|+..+-        ++..+++++++
T Consensus       267 t~sK~l~-~G~~iG~~~~---~~~l~~~l~~----~~~~~t~~~~~~~~aa~~a~L~~~~~--------~~~~~~~~~~~  330 (420)
T 2pb2_A          267 TSAKALG-GGFPVSAMLT---TQEIASAFHV----GSHGSTYGGNPLACAVAGAAFDIINT--------PEVLQGIHTKR  330 (420)
T ss_dssp             EECGGGG-TTSCCEEEEE---CHHHHTTCC--------CCEECCCHHHHHHHHHHHHHHSS--------HHHHHHHHHHH
T ss_pred             Eeccccc-CCCceEEEEE---hHHHHHhhcC----CCcCcccCcCHHHHHHHHHHHHHHHh--------ccHHHHHHHHH
Confidence            7899999 8999999855   6665444322    11122234566666665544432110        24456666777


Q ss_pred             HHHHHHhhhcc--CCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHH
Q 015283          332 QKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEY  397 (410)
Q Consensus       332 ~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~  397 (410)
                      +++.+.|+ ++  +.+. +....+. |.|+++.+      +. ++.+.+++ +||.+.|++    ||+++ ..+++++++
T Consensus       331 ~~l~~~L~-~~~~~~~~-~~~~~~~-g~~~~v~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~~~iRl~~~~~~t~eei~~  406 (420)
T 2pb2_A          331 QQFVQHLQ-AIDEQFDI-FSDIRGM-GLLIGAELKPKYKGRARDFLYAGAE-AGVMVLNAGADVMRFAPSLVVEEADIHE  406 (420)
T ss_dssp             HHHHHHHH-HHHHHHCC-EEEEEEE-TTEEEEEECGGGTTCHHHHHHHHHH-TTEECEESSTTEEEECCCTTCCHHHHHH
T ss_pred             HHHHHHHH-HHHhcCCC-eEEEEec-ceEEEEEECCCchHHHHHHHHHHHH-CCCEEEeCCCCEEEEECCCCCCHHHHHH
Confidence            77777776 54  1110 1222333 45555433      23 34566665 699999874    88854 348999999


Q ss_pred             HHHHHHHHhhhc
Q 015283          398 LADAIIDSYHNV  409 (410)
Q Consensus       398 ~~~~l~~~l~~~  409 (410)
                      ++++|+++++++
T Consensus       407 ~~~~l~~~l~~~  418 (420)
T 2pb2_A          407 GMQRFAQAVGKV  418 (420)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998753

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.95  E-value=1.1e-26  Score=226.87  Aligned_cols=358  Identities=12%  Similarity=0.092  Sum_probs=224.3

Q ss_pred             CCCCCCcccchhHhhh--cCCCCeeeeeeee-eecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc
Q 015283           15 MAPPDPILGVSEAFKA--DTDEKKLNLGVGA-YRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF   91 (410)
Q Consensus        15 ~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~-~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~   91 (410)
                      .+.+..++.+.++...  .....+++++.|. ++|...... .+.+.+++.+.+..+. ..|.+..+..++++++++++.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ylD~~~~~~-~~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~   90 (467)
T 1ax4_A           13 MVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTDSG-TNAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN   90 (467)
T ss_dssp             EEEECCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCSSS-CCCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC
T ss_pred             eeecccccchhHHHHHHHhcCcCcccCCCCceeeecccCcC-CHHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC
Confidence            3444444444443332  2234567777775 344433322 2566666655554433 568777889999999999973


Q ss_pred             CCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC----CCCE---EEEcCCCCcchhhhhhhCCCCccceeeec---C-
Q 015283           92 GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF----PGAK---VLISSPTWGNHKNIFNDARVPWSEYRYYD---P-  160 (410)
Q Consensus        92 ~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~----~gd~---Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~-  160 (410)
                      .        +++++  |+||++|+.++...+  ..    +||+   |+++.+.|..+...+...|.+++.++...   . 
T Consensus        91 ~--------~~v~~--t~ggt~A~~~al~~~--~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  158 (467)
T 1ax4_A           91 Y--------DYIIP--AHQGRGAENILFPVL--LKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSE  158 (467)
T ss_dssp             C--------CEEEE--ESSHHHHHHHHHHHH--HHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTT
T ss_pred             C--------CcEEE--cCCcHHHHHHHHHHH--HHhhccCCCccceEEEeccccchhhHHHhccCCceeccccccccccc
Confidence            2        57888  999999999985544  55    8998   99997777888888888888877665421   1 


Q ss_pred             ----CCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCC---C------
Q 015283          161 ----KTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG---F------  225 (410)
Q Consensus       161 ----~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~---~------  225 (410)
                          .++.+|++.+++.+++.+ ++++++++++|+||| |.+++.+++++|+++|++||+++|+|+++..   +      
T Consensus       159 ~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~  238 (467)
T 1ax4_A          159 TYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARD  238 (467)
T ss_dssp             SCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHC
T ss_pred             ccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccc
Confidence                135689999999997521 257888889999999 8999999999999999999999999998432   0      


Q ss_pred             -CCCCCCCchhHhHH-HhhcCCcEEEEecccccccccCCCc-ceEEEEeCCc-hhHHHHHHHHHhhcc-CcccCCChhHH
Q 015283          226 -ASGSLDNDASSVRL-FATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSS-DLAARVKSQLKRLAR-PMYSNPPVHGA  300 (410)
Q Consensus       226 -~~~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~  300 (410)
                       .+.+  .+...+.. .....  .+++.|+||.+|++   + ||+  +.+++ ++++++......... ..+...+....
T Consensus       239 ~~~~~--~~~~~~~~~~~~~~--d~~~~s~sK~~g~~---~Gg~~--~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  309 (467)
T 1ax4_A          239 PKYKN--ATIKEVIFDMYKYA--DALTMSAKKDPLLN---IGGLV--AIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDM  309 (467)
T ss_dssp             GGGTT--CCHHHHHHHHGGGC--SEEEEETTSTTCCS---SCEEE--EESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHH
T ss_pred             cccCC--Cchhhhhhhhcccc--ceEEEeccccCCCC---cceEE--EeCCHHHHHHHHHhhccccccccccCCccchHH
Confidence             1111  11111100 00112  24568999998765   3 454  33446 777666543322111 11122222222


Q ss_pred             HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-------CC------HHH
Q 015283          301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------LN------KAQ  367 (410)
Q Consensus       301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-------~~------~~~  367 (410)
                      .++...+... .     +  ++..+...++++++.+.|+ +.+    +.+..+.+++++|++       +.      .++
T Consensus       310 ~a~~~~l~~~-~-----~--~~~~~~~~~~~~~l~~~L~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  376 (467)
T 1ax4_A          310 AAMVQGLEEG-T-----E--EEYLHYRIGQVKYLGDRLR-EAG----IPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAV  376 (467)
T ss_dssp             HHHHHHHHHT-T-----C--HHHHHHHHHHHHHHHHHHH-HTT----CCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHH
T ss_pred             HHHHHHHHHh-h-----h--hhHHHHHHHHHHHHHHHHH-hCC----CCcccCCCceEEEEehhhhccccccCCCCHHHH
Confidence            2111122210 0     0  0112222356677888887 654    355567778888765       31      234


Q ss_pred             HHHhhhcCcEEEcC------------C-------C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          368 SDNMTNKWHVYMTK------------D-------G--RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       368 ~~~ll~~~gi~v~~------------~-------g--Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                      ..++++++||.+.|            |       +  ||+++.  .+++++++++++|++++++
T Consensus       377 ~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~  440 (467)
T 1ax4_A          377 INALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK  440 (467)
T ss_dssp             HHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred             HHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence            55664667999876            2       3  899872  5889999999999988764

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.95  E-value=4.1e-27  Score=228.91  Aligned_cols=339  Identities=10%  Similarity=0.019  Sum_probs=202.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...+|+..|......|+.  +|.+.+++.+++..... ..+.+.....++++.+++++.    ..  .+ +++  ++||+
T Consensus        49 ~~~lD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~--~~-v~~--~~ggs  117 (452)
T 3n5m_A           49 KRYLDGMSGLWCVNSGYG--RKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLG----GE--YV-IFF--SNSGS  117 (452)
T ss_dssp             CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHT----SC--EE-EEE--ESSHH
T ss_pred             CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCC----CC--ce-EEE--eCchH
Confidence            468999988653455654  68999999888755321 111123334455555555532    11  34 888  99999


Q ss_pred             hHHHHHHHHHHHh---C---CCCEEEEcCCCCcchhhhhhhCCCCcc-------------ceeeecCCCccc-C------
Q 015283          113 GSLRLAAALIERY---F---PGAKVLISSPTWGNHKNIFNDARVPWS-------------EYRYYDPKTVGL-D------  166 (410)
Q Consensus       113 ~a~~~~~~~~~~~---~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~~~-d------  166 (410)
                      +|++.+.+++...   .   ++|+|++.+|+|.++.......+....             .++..+...... |      
T Consensus       118 eA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (452)
T 3n5m_A          118 EANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYD  197 (452)
T ss_dssp             HHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGG
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHH
Confidence            9999997766533   4   789999999999887654443332211             111100000000 1      


Q ss_pred             ---hhhHHHHHh-cCCCCcEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          167 ---FEGMIADIK-AAPGGSFILLHGCA-HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       167 ---~~~l~~~i~-~~~~~~~~ii~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                         ++.|++.+. ..++++++++++++ +| ||.+. +.+.+++|.++|++||+++|+||+|.+|+..+   ..+.... 
T Consensus       198 ~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g---~~~~~~~-  272 (452)
T 3n5m_A          198 VECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTG---KAFGFMN-  272 (452)
T ss_dssp             CHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGG-
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccc---ccchhhh-
Confidence               788988887 22246777777777 89 99766 77779999999999999999999999987432   1111111 


Q ss_pred             hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHH--HHHhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283          241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKS--QLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK  317 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~  317 (410)
                      .+...++   .+|||.++. | +|+||+++   ++++++.+..  .........+.+.+.+++.++...|+..+-     
T Consensus       273 ~~~~~di---~t~sK~l~~-G~~~ig~~~~---~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-----  340 (452)
T 3n5m_A          273 YDVKPDI---ITMAKGITS-AYLPLSATAV---KREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN-----  340 (452)
T ss_dssp             TTCCCSE---EEECGGGGT-TSSCCEEEEE---EHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH-----
T ss_pred             cCCCCCE---EeecccccC-CCcceEEEEE---CHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh-----
Confidence            1122233   378999985 9 99999855   7774444321  001111122334566666666555542110     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceeeecCC----------C----HHHHHHhhhcCcEEEc
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL----------N----KAQSDNMTNKWHVYMT  380 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~----------~----~~~~~~ll~~~gi~v~  380 (410)
                         +...++++++.+++.+.|.+   ..+.   +....+. |.|.++.+          +    .++...+++ .||.+.
T Consensus       341 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~  412 (452)
T 3n5m_A          341 ---ENLIERSAQMGSLLLEQLKEEIGEHPL---VGDIRGK-GLLVGIELVNDKETKEPIDNDKIASVVNACKE-KGLIIG  412 (452)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHTTCTT---EEEEEES-SSCEEEEEEEETTTTEECCHHHHHHHHHHHHH-TTEECE
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHHhcCCC---eEEEEEE-EEEEEEEEecCCcccCCCCHHHHHHHHHHHHH-CCcEEe
Confidence               12334444444444444440   3321   2233344 33433322          1    234556665 699998


Q ss_pred             CCC----------eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          381 KDG----------RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       381 ~~g----------Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      |++          ||+++. .+++++++++++|++++++
T Consensus       413 ~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          413 RNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             ECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             ecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            752          886443 4899999999999999875

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.95  E-value=2.8e-26  Score=217.55  Aligned_cols=312  Identities=14%  Similarity=0.109  Sum_probs=201.8

Q ss_pred             cccHHHHHHHHHhhccCCCccCcCC--cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC
Q 015283           52 YVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA  129 (410)
Q Consensus        52 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd  129 (410)
                      .+++.+.+++.+....    .+.+.  .-..++++.+++++    +.+.+.+.+++  ++||+++++++.  ...+.+||
T Consensus        29 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~----g~~~~~~~i~~--~~ggt~al~~~~--~~~~~~gd   96 (376)
T 3f0h_A           29 MSSEEVRAIGAEQVPY----FRTTEFSSTMLENEKFMLEYA----KAPEGSKAVFM--TCSSTGSMEAVV--MNCFTKKD   96 (376)
T ss_dssp             CCCHHHHHHHTSCCCC----CSSHHHHHHHHHHHHHHHHHH----TCCTTCEEEEE--SSCHHHHHHHHH--HHHCCTTC
T ss_pred             CCcHHHHHHhcCCCCC----CCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEE--cCChhHHHHHHH--HhccCCCC
Confidence            3478999888765422    12121  22345556666654    33222244555  888999999984  33467999


Q ss_pred             EEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283          130 KVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD  207 (410)
Q Consensus       130 ~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~  207 (410)
                      +|++++|+|.++.  ..+...|.+++.++.  +.++.+|++.+++.+..   +++++++++|+||||.+++   +++|.+
T Consensus        97 ~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~---l~~i~~  168 (376)
T 3f0h_A           97 KVLVIDGGSFGHRFVQLCEIHEIPYVALKL--EHGKKLTKEKLYEYDNQ---NFTGLLVNVDETSTAVLYD---TMMIGE  168 (376)
T ss_dssp             CEEEEESSHHHHHHHHHHHHTTCCEEEEEC--CTTCCCCHHHHHTTTTS---CCCEEEEESEETTTTEECC---HHHHHH
T ss_pred             eEEEEeCChhhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHhhcc---CceEEEEecccCCcceecC---HHHHHH
Confidence            9999998776543  346678999988887  34578999999887653   6777888999999999888   778888


Q ss_pred             HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHH---
Q 015283          208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQ---  283 (410)
Q Consensus       208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~---  283 (410)
                      +|++||+++|+|++|..+...   .   .+.    ..+.++++.|+||.++ ++|  +|++++   ++++++++...   
T Consensus       169 l~~~~~~~li~D~~~~~~~~~---~---~~~----~~~~d~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~~~~~~~  233 (376)
T 3f0h_A          169 FCKKNNMFFVCDCVSAFLADP---F---NMN----ECGADVMITGSQKVLACPPG--ISVIVL---APRGVERVEKSKVR  233 (376)
T ss_dssp             HHHHTTCEEEEECTTTTTTSC---C---CHH----HHTCSEEEEETTTTTCCCSS--CEEEEE---CHHHHHHHHTCCCC
T ss_pred             HHHHcCCEEEEEcCccccCcc---c---ccc----ccCccEEEecCcccccCCCc--eEEEEE---CHHHHHHhhcCCCC
Confidence            899999999999997765432   1   111    1124688899999998 556  577654   77765554321   


Q ss_pred             ---------HHhhccC-cccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          284 ---------LKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       284 ---------~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                               ....... +...++..+..++...+..  + .  .+ .+++.+++++++++++.+.|+ +++    +.+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~-~--~~~~~~~~~~~~~~~~~~l~~~L~-~~~----~~~~~  303 (376)
T 3f0h_A          234 TMYFDLKDALKNQERGQTPFTPAVGILLQINERLKE--I-K--KHGGADAEVARIASQAADFRAKIK-DLP----FELVS  303 (376)
T ss_dssp             CSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH--H-H--HTTHHHHHHHHHHHHHHHHHHHTT-TSS----EEECC
T ss_pred             ceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHH--H-H--HhcCHHHHHHHHHHHHHHHHHHHH-HcC----CccCc
Confidence                     0000001 1123333221222222210  0 0  11 256788888999999999998 776    33333


Q ss_pred             CC--cceeeec--CCCH-HHHHHhhhcCcEEEcCCC--------eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          353 RQ--IGMFSFT--GLNK-AQSDNMTNKWHVYMTKDG--------RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       353 ~~--~~~~~~~--~~~~-~~~~~ll~~~gi~v~~~g--------Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      +.  ...+.+.  +.+. ++.+.+.+++||.+.++.        ||++.. .+++++++++++|++++++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~  373 (376)
T 3f0h_A          304 ESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR  373 (376)
T ss_dssp             SSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             cccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            32  2222332  3444 456677665699998752        999863 4899999999999999864

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.95  E-value=5.3e-27  Score=227.87  Aligned_cols=341  Identities=13%  Similarity=-0.004  Sum_probs=195.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|......|+.  +|.+.+++.+++...  .+|....+..+.++++++++....+.. ..+++++  ++||++
T Consensus        64 ~~ylD~~~~~~~~~lGh~--~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~--~~sGse  136 (453)
T 4ffc_A           64 NSFIDLGAGIAVTTVGAS--HPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTAL--FNSGAE  136 (453)
T ss_dssp             CEEEESSHHHHTCTTCTT--CHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEE--ESSHHH
T ss_pred             CEEEEcCCCcccCcCCCC--CHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEE--eCcHHH
Confidence            356888877553344543  689999988877542  223222233344444444433322211 1468999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCC--------------CCccceeeecC--CCcccC--------hhh
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR--------------VPWSEYRYYDP--KTVGLD--------FEG  169 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g--------------~~~~~v~~~~~--~~~~~d--------~~~  169 (410)
                      |++.++++.....+++.|++.+++|.++.......+              ..+..++....  +.++.+        ++.
T Consensus       137 A~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  216 (453)
T 4ffc_A          137 AVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISR  216 (453)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHH
Confidence            999997665444466899999999987654433221              12333443210  111222        244


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTG--IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG--~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +++.+..   .+..++++.|.|++|  ..++.+.+++|.++|++||+++|+||+|.+|+..+   ..+.... .+...+ 
T Consensus       217 l~~~i~~---~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g---~~~a~~~-~~~~pd-  288 (453)
T 4ffc_A          217 IETQIGA---QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTG---AWFASEH-EGIVPD-  288 (453)
T ss_dssp             HHHHTCG---GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHH-HTCCCS-
T ss_pred             HHHhcCC---CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccc---ccchhhh-cCCCcc-
Confidence            4444432   344444467777776  34477779999999999999999999999886432   1222222 122223 


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                        +.+|||.++. |+|+||+++   ++++++.    +.......+.+.+.+++.++...|+..+-    .+..++.++..
T Consensus       289 --i~t~sK~~~~-G~~~G~~~~---~~~i~~~----~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~  354 (453)
T 4ffc_A          289 --IVTMAKGIAG-GMPLSAVTG---RAELMDA----VYAGGLGGTYGGNPVTCAAAVAALGVMRE----LDLPARARAIE  354 (453)
T ss_dssp             --EEEECGGGGT-TSSCEEEEE---EHHHHTT----SCTTSSCCSSSSCHHHHHHHHHHHHHHHH----TTHHHHHHHHH
T ss_pred             --hHhhhhhhcC-CcCeEEEEE---CHHHHhh----hcccCcCCCCCcCHHHHHHHHHHHHHhhh----hhHHHHHHHHH
Confidence              3478999985 999999855   7774444    33222233345666677666555542110    01112222223


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--------C----HHHHHHhhhcCcEEEcCCC------eEEecC
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--------N----KAQSDNMTNKWHVYMTKDG------RISLAG  389 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~ll~~~gi~v~~~g------Ris~~~  389 (410)
                      +..++.+.+.+. ..+.   +....+ .|.|.++.+        +    ..+...+++ +||.+.|++      ||+++.
T Consensus       355 ~~l~~~l~~~~~-~~~~---~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~iRi~~~~  428 (453)
T 4ffc_A          355 ASVTSRLSALAE-EVDI---IGEVRG-RGAMLAIEIVKPGTLEPDAALTKSIAAEALS-QGVLILTCGTFGNVIRLLPPL  428 (453)
T ss_dssp             HHHHHHHHHHHH-HCSS---EEEEEE-ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECCEECTTSCEEEECCCT
T ss_pred             HHHHHHHHHHHh-hCCC---eEEEEe-eceEEEEEEecCcccCCCHHHHHHHHHHHHh-CCCEEecCCCCCCEEEEECCC
Confidence            333333333333 3331   222233 345555432        1    233455555 699998864      777553


Q ss_pred             -CCcccHHHHHHHHHHHhhhc
Q 015283          390 -LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 -~~~~~i~~~~~~l~~~l~~~  409 (410)
                       .+++++++++++|+++++++
T Consensus       429 ~~t~e~i~~~l~~l~~~l~~~  449 (453)
T 4ffc_A          429 VIGDDLLDEGITALSDIIRAK  449 (453)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHH
Confidence             48999999999999998764

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.95  E-value=2.2e-26  Score=224.07  Aligned_cols=347  Identities=11%  Similarity=-0.012  Sum_probs=207.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|......|+.  +|.+.+++.+.+.... ..|....+..+.++++++++....+  ...++|++  ++||++
T Consensus        50 ~~ylD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~ggse  122 (459)
T 4a6r_A           50 NKIIDGMAGLWCVNVGYG--RKDFAEAARRQMEELP-FYNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFY--TNSGSE  122 (459)
T ss_dssp             CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHHHCS-CCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEE--ESSHHH
T ss_pred             CEEEECCCchhcccCCCC--CHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCchHH
Confidence            467899888653455554  6899999888775422 2233333344555555555544332  23578999  999999


Q ss_pred             HHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCCCC-------------ccceeeec--C-CCcccC-----
Q 015283          114 SLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARVP-------------WSEYRYYD--P-KTVGLD-----  166 (410)
Q Consensus       114 a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~--~-~~~~~d-----  166 (410)
                      +++.+.+++...      .+++.|++.+|+|.++.......+..             +..++...  . ..+ .|     
T Consensus       123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~  201 (459)
T 4a6r_A          123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG  201 (459)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence            999987666443      25799999999998876544432221             12222100  0 111 23     


Q ss_pred             ---hhhHHHHHhcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh
Q 015283          167 ---FEGMIADIKAAP-GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA  241 (410)
Q Consensus       167 ---~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~  241 (410)
                         ++++++.+.+.. +++.++++.+++|++|. +++.+.+++|.++|++||+++|+||+|.+|+..+   ..+.... .
T Consensus       202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G---~~~~~~~-~  277 (459)
T 4a6r_A          202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTG---EWFGHQH-F  277 (459)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHH-H
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---ccchHhh-c
Confidence               678888886422 34566665555666666 4588889999999999999999999999987432   1222222 2


Q ss_pred             hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283          242 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME  321 (410)
Q Consensus       242 ~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~  321 (410)
                      +..++++   +|||.++.+|+|+||+++   ++++++.+... .......+.+.+.+++.++...|+..+-    .+..+
T Consensus       278 ~~~pdi~---t~sK~l~gg~~~lg~v~~---~~~i~~~~~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~  346 (459)
T 4a6r_A          278 GFQPDLF---TAAKGLSSGYLPIGAVFV---GKRVAEGLIAG-GDFNHGFTYSGHPVCAAVAHANVAALRD----EGIVQ  346 (459)
T ss_dssp             TCCCSEE---EECGGGGTTSSCCEEEEE---CHHHHHHHHHH-CTTHHHHHHCSCHHHHHHHHHHHHHHHH----TCHHH
T ss_pred             CCCCCee---ehhhhhcCCCCCccceee---CHHHHHHhhcC-CCcccCCCCCCCHHHHHHHHHHHHHHhc----chHHH
Confidence            2233433   689999855599999755   88876666531 1111112234556666666555542110    01122


Q ss_pred             HHH-HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------------CHHHHHHhhhcCcEEEcCCC-
Q 015283          322 MMA-GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------------NKAQSDNMTNKWHVYMTKDG-  383 (410)
Q Consensus       322 ~~~-~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ll~~~gi~v~~~g-  383 (410)
                      +.+ +.....++.|.+.|. +.+.   +....+.+ .|.++.+                ..++...+++ +||.+.|+| 
T Consensus       347 ~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~g~  420 (459)
T 4a6r_A          347 RVKDDIGPYMQKRWRETFS-RFEH---VDDVRGVG-MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFR-NNLIMRACGD  420 (459)
T ss_dssp             HHHHTHHHHHHHHHHHHHT-TCTT---EEEEEEET-TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHH-TTEECEEETT
T ss_pred             HHHHHHHHHHHHHHHHHHh-cCCC---eEEEEEEE-EEEEEEEecCccccccccchHHHHHHHHHHHHH-CCeEEecCCC
Confidence            333 333334444434444 3331   23334443 3433321                1234556665 599999976 


Q ss_pred             --eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          384 --RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 --Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                        ||+++. .+++++++++++|+++++++
T Consensus       421 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  449 (459)
T 4a6r_A          421 HIVSAPPLVMTRAEVDEMLAVAERCLEEF  449 (459)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence              888442 49999999999999988653

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.95  E-value=2.1e-26  Score=218.91  Aligned_cols=316  Identities=13%  Similarity=0.051  Sum_probs=209.0

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh---
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---  125 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~---  125 (410)
                      ..+++.+.+++.+....    .|.+  .....++++++++++....+  ++++++++  ++||++++.++..  ...   
T Consensus        14 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~--~~g~t~al~~~~~--~~~~~~   83 (385)
T 2bkw_A           14 IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVL--AGSGTLGWDIFAS--NFILSK   83 (385)
T ss_dssp             CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEE--ESCTTHHHHHHHH--HHSCTT
T ss_pred             cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEE--cCchHHHHHHHHH--HHhccC
Confidence            33578888877664422    1222  12466889999999765433  34678999  9999999999843  334   


Q ss_pred             CCCCEEEEc-CCCCcchh-hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283          126 FPGAKVLIS-SPTWGNHK-NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE  203 (410)
Q Consensus       126 ~~gd~Vl~~-~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~  203 (410)
                      .+||+|+++ .|+|..+. ..++..|.+++.+++. +.++.+|++.+++.+++  .+++++++++|+||||.+.+   ++
T Consensus        84 ~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~---l~  157 (385)
T 2bkw_A           84 APNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQ--NSYGAVTVTHVDTSTAVLSD---LK  157 (385)
T ss_dssp             CSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHH--SCCSEEEEESEETTTTEECC---HH
T ss_pred             CCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhc--CCCCEEEEEccCCCcCeEcC---HH
Confidence            799999888 45666553 6677889999888872 24567899999999875  24556777899999999887   56


Q ss_pred             HHHHHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHH-H
Q 015283          204 KIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAA-R  279 (410)
Q Consensus       204 ~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~-~  279 (410)
                      +|+++|++|  |+++|+|++|.....   ..   .+    ...+.++++.|+||.+ |++|+  ||+++   +++.++ +
T Consensus       158 ~i~~~~~~~~~~~~li~D~a~~~~~~---~~---~~----~~~~~d~~~~s~~K~~~~~~G~--G~~~~---~~~~~~~~  222 (385)
T 2bkw_A          158 AISQAIKQTSPETFFVVDAVCSIGCE---EF---EF----DEWGVDFALTASQKAIGAPAGL--SISLC---SSRFMDYA  222 (385)
T ss_dssp             HHHHHHHHHCTTSEEEEECTTTTTTS---CC---CT----TTTTCSEEEEESSSTTCCCSCE--EEEEE---CHHHHHHH
T ss_pred             HHHHHHHhhCCCCEEEEECccccCCc---cc---cc----cccCceEEEecCccccccCCcc--eEEEE---cHHHHHHH
Confidence            888889999  999999999863221   11   11    1223568889999966 45664  89855   666555 4


Q ss_pred             HH------------------HHHHhhcc--Ccc-cCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 015283          280 VK------------------SQLKRLAR--PMY-SNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       280 ~~------------------~~~~~~~~--~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~  337 (410)
                      +.                  ........  ..+ .+++..++.++...++..      .+ .+++.+++++++++++.+.
T Consensus       223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~~l~~~  296 (385)
T 2bkw_A          223 LNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEI------LEEGLHKRWDLHREMSDWFKDS  296 (385)
T ss_dssp             TCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH------HHHCHHHHHHHHHHHHHHHHHH
T ss_pred             HhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH------HHccHHHHHHHHHHHHHHHHHH
Confidence            31                  11111111  111 234444444333333211      11 2467788889999999999


Q ss_pred             h-hhccCCCCCcccccC-----CcceeeecCCC-H-HHHHHhhhcCcEEEcCC-------C--eEE-ec----CCCcccH
Q 015283          338 L-SAKDKSGKDWSFILR-----QIGMFSFTGLN-K-AQSDNMTNKWHVYMTKD-------G--RIS-LA----GLSLAKC  395 (410)
Q Consensus       338 l-~~~~g~~~~~~~~~~-----~~~~~~~~~~~-~-~~~~~ll~~~gi~v~~~-------g--Ris-~~----~~~~~~i  395 (410)
                      | + +++    +.+..+     ..+.++|+.+. . ++.+++. ++||.+.++       +  ||+ ++    ..+++++
T Consensus       297 L~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i  370 (385)
T 2bkw_A          297 LVN-GLQ----LTSVSRYPSNMSAHGLTAVYVADPPDVIAFLK-SHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYM  370 (385)
T ss_dssp             HHT-TTC----CEESSCSSSTTBCSSCEEEECSCHHHHHHHHH-HTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHH
T ss_pred             HHH-hcC----ceecccCcccccCCceEEEecCCHHHHHHHHH-HCCeEEeCCCCcccCCCEEEEEccccccccCCHHHH
Confidence            9 8 765    344332     23556665542 3 3455554 579999875       1  999 65    2589999


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      ++++++|+++++++
T Consensus       371 ~~~~~~l~~~~~~~  384 (385)
T 2bkw_A          371 KNCFDLIKLALQRK  384 (385)
T ss_dssp             HHHHHHHHHHTTC-
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999998764

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.95  E-value=1.1e-26  Score=224.80  Aligned_cols=340  Identities=11%  Similarity=0.022  Sum_probs=205.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|.+....|+  .+|.+.+++.+.+....  ...| +.....++++.+++++.    .  ++++|++  ++||
T Consensus        43 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~----~--~~~~v~~--~~gg  111 (433)
T 1zod_A           43 RAILDFTSGQMSAVLGH--CHPEIVSVIGEYAGKLDHLFSEM-LSRPVVDLATRLANITP----P--GLDRALL--LSTG  111 (433)
T ss_dssp             CEEEETTHHHHTCTTCB--TCHHHHHHHHHHHHHCCCCCTTC-CCHHHHHHHHHHHHHSC----T--TCCEEEE--ESCH
T ss_pred             CEEEEcccchhccccCC--CCHHHHHHHHHHHHhCccccccc-CCHHHHHHHHHHHHhCC----C--CcCEEEE--eCch
Confidence            35678877764223343  26889998888774421  1233 23334567777776632    1  2578999  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC------------CCCccceeeecC--CCc--------ccChhh
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA------------RVPWSEYRYYDP--KTV--------GLDFEG  169 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~------------g~~~~~v~~~~~--~~~--------~~d~~~  169 (410)
                      +++++.+.+++..+.++|+|++.+|+|.++.......            ...+..++....  ..+        .+|++.
T Consensus       112 ~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~  191 (433)
T 1zod_A          112 AESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDY  191 (433)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHH
Confidence            9999998665433345689999999997764422211            012223322110  011        246899


Q ss_pred             HHHHHhcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          170 MIADIKAAP-GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       170 l~~~i~~~~-~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +++.+++.. ++++++++++.+||||. +++.+++++|.++|++||+++|+||+|.+|+..+   ....+.. .....++
T Consensus       192 le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g---~~~~~~~-~~~~~di  267 (433)
T 1zod_A          192 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG---TMFACQR-DGVTPDI  267 (433)
T ss_dssp             HHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHH-HTCCCSE
T ss_pred             HHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---hHhHHhh-cCCCCCE
Confidence            998887421 35556664444688996 5788889999999999999999999999886432   1112212 1222333


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                         .|+||.++. |+|+||+++   ++++++.+...  ......+.+.+.+++.++...|+..      .+  +...+++
T Consensus       268 ---~s~sK~~~~-G~~ig~~~~---~~~~~~~~~~~--~~~~~~t~~~~~~~~~a~~aal~~~------~~--~~~~~~~  330 (433)
T 1zod_A          268 ---LTLSKTLGA-GLPLAAIVT---SAAIEERAHEL--GYLFYTTHVSDPLPAAVGLRVLDVV------QR--DGLVARA  330 (433)
T ss_dssp             ---EEECHHHHT-TSSCEEEEE---CHHHHHHHHHT--TCCCCCTTTTCHHHHHHHHHHHHHH------HH--TTHHHHH
T ss_pred             ---EEecccccC-CCCeeEEEE---hHHHHHhhccC--CCCCCCCCCcCHHHHHHHHHHHHHH------Hh--CCHHHHH
Confidence               389999995 999999865   77766555431  1111122345566666555444311      00  1234555


Q ss_pred             HHHHHHHHHHhhhccC--CCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCC------C--e
Q 015283          328 KNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKD------G--R  384 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~------g--R  384 (410)
                      +++++++.+.|+ ++.  .+. +....+. |.|+|+.+             ..++...+++ +||.+.|+      +  |
T Consensus       331 ~~~~~~l~~~l~-~l~~~~~~-~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~~~lR  406 (433)
T 1zod_A          331 NVMGDRLRRGLL-DLMERFDC-IGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECMN-LGLSMNIVQLPGMGGVFR  406 (433)
T ss_dssp             HHHHHHHHHHHH-HHHHHCTT-EEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHHH-TTEECCEECCTTSCCEEE
T ss_pred             HHHHHHHHHHHH-HHHHhCCC-eEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHH-CCCeEeccCCCCCCCEEE
Confidence            556666666665 431  100 2223333 45555532             1234556664 69999875      3  8


Q ss_pred             EEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          385 ISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       385 is~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |+++ ..+++++++++++|+++++++
T Consensus       407 i~~~~~~t~~~i~~~l~~l~~~l~~~  432 (433)
T 1zod_A          407 IAPPLTVSEDEIDLGLSLLGQAIERA  432 (433)
T ss_dssp             ECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EECCcCCCHHHHHHHHHHHHHHHHHh
Confidence            8654 248999999999999998764

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.94  E-value=8.6e-26  Score=215.95  Aligned_cols=228  Identities=13%  Similarity=0.083  Sum_probs=162.0

Q ss_pred             eeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           38 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        38 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      +++.|.| |....+++.+.+.+++...........|.  +.....++++.+++++..       + +.++  +.+|++++
T Consensus        24 ~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-------~-~~i~--~~sG~~a~   92 (398)
T 2rfv_A           24 TGALSTP-IFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG-------E-AGLA--TASGISAI   92 (398)
T ss_dssp             TCCSSCC-CCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTC-------S-EEEE--ESSHHHHH
T ss_pred             CCCcCCC-CcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCC-------C-cEEE--ECCHHHHH
Confidence            5788887 66666666788877766322221113343  456678899999998632       2 4444  57788999


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          116 RLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       116 ~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ..+.  ...+.+||+|+++.|+|.++...+    +..|.+++.++.       .|++++++.+++   +++++++++|+|
T Consensus        93 ~~~l--~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~i~~---~~~~v~~~~~~n  160 (398)
T 2rfv_A           93 TTTL--LTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA-------AKPEEIRAAMRP---ETKVVYIETPAN  160 (398)
T ss_dssp             HHHH--HHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT-------TSHHHHHHHCCT---TEEEEEEESSBT
T ss_pred             HHHH--HHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC-------CCHHHHHHhcCC---CCeEEEEECCCC
Confidence            9874  333679999999999999987766    778988888876       278999988874   678888899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEE
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVV  270 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~  270 (410)
                      |||.+++   +++|+++|++||+++|+||+|..+.+..      ..     ..+.++++.|+||.++.+|+|+ ||+++ 
T Consensus       161 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~------~~-----~~~~di~~~s~sK~~~~~g~~~~G~~~~-  225 (398)
T 2rfv_A          161 PTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ------PL-----QLGADIVVHSVTKYINGHGDVIGGIIVG-  225 (398)
T ss_dssp             TTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC------GG-----GGTCSEEEEETTTTTTCSSCCCCEEEEE-
T ss_pred             CCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC------ch-----hhCCcEEEEeCcccccCCCCceEEEEEE-
Confidence            9999886   7788888999999999999988766421      11     1146789999999999899998 99755 


Q ss_pred             eCCchhHH-HHHHHHHhhccCc-ccCCChhHHHHHHHHhCC
Q 015283          271 CSSSDLAA-RVKSQLKRLARPM-YSNPPVHGARIVANVVGN  309 (410)
Q Consensus       271 ~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~  309 (410)
                        +++.++ .+....    ... ..+.+...+.++...|+.
T Consensus       226 --~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~  260 (398)
T 2rfv_A          226 --KQEFIDQARFVGL----KDITGGCMSPFNAWLTLRGVKT  260 (398)
T ss_dssp             --CHHHHHHHHHTHH----HHTTCCCCCHHHHHHHHHHHTT
T ss_pred             --CHHHHHHHHHHHH----HhCCCCCCCHHHHHHHHhhhhh
Confidence              666554 333221    112 234556666666666654

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.94  E-value=2.4e-26  Score=217.71  Aligned_cols=315  Identities=13%  Similarity=0.054  Sum_probs=196.8

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      +++|++.|.+     .+++++.+.+++..     + ..+      ..+++.+++++.+.+|.. +++++++  ++||+++
T Consensus        29 ~v~~~~~~~~-----~~~~~~~v~~a~~~-----~-~~~------~~~~~~~~~~~a~~~g~~-~~~~~~~--~~ggt~a   88 (374)
T 2aeu_A           29 ALYDLSGLSG-----GFLIDEKDKALLNT-----Y-IGS------SYFAEKVNEYGLKHLGGD-ENDKCVG--FNRTSSA   88 (374)
T ss_dssp             GCEECSSCCC-----CCCCCHHHHHHHTS-----T-THH------HHHHHHHHHHHHHHHTCC-TTEEEEE--ESSHHHH
T ss_pred             ceeeecccCC-----CCCCCHHHHHHHHH-----h-cCc------hHHHHHHHHHHHHHhCCC-CcceEEE--EcChHHH
Confidence            6889887764     34458899888751     1 111      233334443332222221 2467888  8999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE-EEeCCCC
Q 015283          115 LRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI-LLHGCAH  190 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~-ii~~~p~  190 (410)
                      +..+..   .+ +||+|++++|+|+++..   .++..|++++.+         .|++.+++. .   +++++ +++++|+
T Consensus        89 ~~~~~~---~~-~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~---~~~~~~v~~~~p~  151 (374)
T 2aeu_A           89 ILATIL---AL-KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-I---DKDTLVIITGSTM  151 (374)
T ss_dssp             HHHHHH---HH-CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-C---CTTEEEEEECBCT
T ss_pred             HHHHHH---hC-CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-C---CCccEEEEEccCC
Confidence            999743   34 99999999999887654   566788887766         277888776 3   36677 7889999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      ||||.  +..++++|.++|++||+++|+||+|..+..++. ......    .. ..+++++|+||.+  +|+|+||+++ 
T Consensus       152 nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~----~~-~~di~~~S~sK~l--~g~~~G~~~~-  220 (374)
T 2aeu_A          152 DLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLF-NQPPAL----KL-GADLVVTSTDKLM--EGPRGGLLAG-  220 (374)
T ss_dssp             TSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHT-TCCCHH----HH-TCSEEEEETTSSS--SSCSCEEEEE-
T ss_pred             CCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccc-ccCCcc----cc-CCcEEEecCcccc--cCcceEEEEE-
Confidence            99996  689999999999999999999999866531000 000011    11 2468899999985  5789999755 


Q ss_pred             eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH----HHHHHHHHHhhhccCCCC
Q 015283          271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK----NVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~g~~~  346 (410)
                        ++++++++.....    ....+++.+.+.++...|.....     +.+++..+..+    ++++.+.+.|. .+....
T Consensus       221 --~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~al~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~  288 (374)
T 2aeu_A          221 --KKELVDKIYIEGT----KFGLEAQPPLLAGIYRALKNFNL-----ERIRKAFERAKNFDLSKIEKLNKELK-AIDDNI  288 (374)
T ss_dssp             --EHHHHHHHHHHHH----TTTCBCCHHHHHHHHHHHHHCCH-----HHHHHHHHHHHHCCCHHHHHHHHHHT-TTCTTE
T ss_pred             --CHHHHHHHHHhhc----cccCCCCHHHHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhcc
Confidence              6787666654332    12224556666666555543211     01112222222    22555666665 431000


Q ss_pred             Cccc-ccCCcceeeecCCCH--H------HHHHhhhcCcEEEcCCC---------eEEecCC--CcccHHHHHHHHHHHh
Q 015283          347 DWSF-ILRQIGMFSFTGLNK--A------QSDNMTNKWHVYMTKDG---------RISLAGL--SLAKCEYLADAIIDSY  406 (410)
Q Consensus       347 ~~~~-~~~~~~~~~~~~~~~--~------~~~~ll~~~gi~v~~~g---------Ris~~~~--~~~~i~~~~~~l~~~l  406 (410)
                      .+.+ ..+.+.++.|.....  +      ++.++++++||.+.|+.         ||+++..  ++.+++++.+.|++++
T Consensus       289 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l  368 (374)
T 2aeu_A          289 NIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESI  368 (374)
T ss_dssp             EEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHH
T ss_pred             CcceeeCCceEEEEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHH
Confidence            1333 345555556654432  1      45577777799998861         9998752  2335899999999888


Q ss_pred             hhc
Q 015283          407 HNV  409 (410)
Q Consensus       407 ~~~  409 (410)
                      +++
T Consensus       369 ~~~  371 (374)
T 2aeu_A          369 KMA  371 (374)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.94  E-value=1.1e-27  Score=229.17  Aligned_cols=318  Identities=12%  Similarity=0.029  Sum_probs=187.9

Q ss_pred             CcccccHHHHHHHHHhhccC---CCccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLERG---ENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAAL  121 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~---~~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~  121 (410)
                      +..++++.+.+++.+.+...   ....|.    ......++++.+++++..      +++++++  ++||++++.+++..
T Consensus        28 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~------~~~~v~~--~~g~t~al~~~~~~   99 (400)
T 3vax_A           28 ATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSA------EPDELIF--TSGATESNNIALLG   99 (400)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTC------CGGGEEE--ESCHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCC------CCCcEEE--eCCHHHHHHHHHHH
Confidence            44455789999888776321   001121    123356777777777532      2678999  99999999998543


Q ss_pred             HHH--hCCCC-EEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCC
Q 015283          122 IER--YFPGA-KVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI  195 (410)
Q Consensus       122 ~~~--~~~gd-~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~  195 (410)
                      +..  ..+|| .|+++.++|+++...+.   ..|++++.++.  ..++.+|++++++.+.+   +++++++++|+||||.
T Consensus       100 l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~  174 (400)
T 3vax_A          100 LAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTP--GPSGRISVEGVMERLRP---DTLLVSLMHVNNETGV  174 (400)
T ss_dssp             THHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECC--CTTCCCCHHHHHTTCCT---TEEEEECCSBCTTTCB
T ss_pred             HHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEcc--CCCCCcCHHHHHHhcCC---CceEEEEECCCCCcee
Confidence            311  15899 99999999998766554   46889998887  34677899999998875   7888999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283          196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD  275 (410)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~  275 (410)
                      +.+   +++|.++|+++|+++|+|++|.....      ...    .... .++++.|+||.+|++|  +|++++ ..+++
T Consensus       175 ~~~---l~~i~~la~~~~~~li~D~a~~~~~~------~~~----~~~~-~d~~~~s~~K~~g~~g--~g~~~~-~~~~~  237 (400)
T 3vax_A          175 IQP---VAELAQQLRATPTYLHVDAAQGYGKV------PGD----LTTP-IDMISISGHKIGAPKG--VGALVT-RRREE  237 (400)
T ss_dssp             BCC---HHHHHHHHTTSSCEEEEECTTTTTTS------GGG----GGSC-CSEEEEETGGGTSCSS--CEEEEE-CBCSS
T ss_pred             eCc---HHHHHHHHHhcCCEEEEEhhhhcCCC------CcC----hhhc-CcEEEEeHHHhCCCCc--eEEEEE-ecchh
Confidence            877   56788889999999999999864321      111    1122 5688999999877655  577630 33421


Q ss_pred             hH---HHHHHHHH---hhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283          276 LA---ARVKSQLK---RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS  349 (410)
Q Consensus       276 ~~---~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~  349 (410)
                      +.   +.+...+.   .........++..++.++...++.      +.+.+++.+++++++++++.+.|+ ..+    +.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~-~~~----~~  306 (400)
T 3vax_A          238 MDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI------FEAEHAQWQVAAQDLRSRLLAGLA-STS----FQ  306 (400)
T ss_dssp             STTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH------HHHSHHHHHHHHHHHHHHHHHHHT-TTT----CE
T ss_pred             ccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH------HHhhHHHHHHHHHHHHHHHHHhhC-CCC----EE
Confidence            11   00111010   000011123344333333333321      123457888889999999999886 444    34


Q ss_pred             cccCCc---ceeeec---CCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEe-cC-CCccc
Q 015283          350 FILRQI---GMFSFT---GLNKAQSDNMTNKWHVYMTKD-------------------------G--RISL-AG-LSLAK  394 (410)
Q Consensus       350 ~~~~~~---~~~~~~---~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~-~~-~~~~~  394 (410)
                      +..+..   +.++++   +.+.+.+.+.+. +||.+.+|                         +  ||++ +. .++++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~  385 (400)
T 3vax_A          307 VNGDQDHVVPHILNLSFEDVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLD  385 (400)
T ss_dssp             ECSCTTSBCTTEEEEECTTCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC------
T ss_pred             EeCCcccCCCCEEEEEeCCCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHH
Confidence            444432   222222   345555444444 69988774                         4  9999 53 47899


Q ss_pred             HHHHHHHHHHHhhh
Q 015283          395 CEYLADAIIDSYHN  408 (410)
Q Consensus       395 i~~~~~~l~~~l~~  408 (410)
                      +++++++|++++++
T Consensus       386 i~~~~~~l~~~~~~  399 (400)
T 3vax_A          386 VEELARGVAKLKPS  399 (400)
T ss_dssp             --------------
T ss_pred             HHHHHHHHHHHhcc
Confidence            99999999998764

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.94  E-value=6.4e-26  Score=217.39  Aligned_cols=325  Identities=14%  Similarity=0.130  Sum_probs=208.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCc---ccHH--HHH-----HHHHHhcCCCCCcccCCce
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---GLAA--FNK-----VTAELLFGADNSVLKEQRV  103 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~~~--lr~-----aia~~~~~~~~~~~~~~~i  103 (410)
                      .+.|+|..|.+      +. ++.+.+++.+.+.......|+...   |.+.  +++     .+++++.    .  +++++
T Consensus        23 ~~~i~~~~~~~------~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g----~--~~~~i   89 (407)
T 2dkj_A           23 REGLELIASEN------FV-SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG----A--AWANV   89 (407)
T ss_dssp             HTSEECCTTCC------CC-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----C--SEEEC
T ss_pred             hcceeeccCCC------CC-CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhC----C--CcceE
Confidence            46799998875      33 799999998887542224564322   4432  333     5556542    2  13445


Q ss_pred             EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh---hhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCC
Q 015283          104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK---NIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~  179 (410)
                      ++   .+|++++..+...+  +.+||+|++++|+|+.+.   ..++..|..+..+++. +++++.+|++.+++.+++  .
T Consensus        90 ~~---~sGt~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~  162 (407)
T 2dkj_A           90 QP---HSGSQANMAVYMAL--MEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALE--H  162 (407)
T ss_dssp             CC---SSHHHHHHHHHHHH--CCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHH--H
T ss_pred             Ee---cchHHHHHHHHHHh--cCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhh--c
Confidence            44   45667888874433  679999999999999883   4555566654555542 224678999999999874  1


Q ss_pred             CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC-CCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      +++++++++|+||  ...   ++++|.++|++||+++|+||+|.. +.+.+...  ..    ..  ..+++++|+||.+ 
T Consensus       163 ~~~~v~~~~p~~~--~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~--~~----~~--~~di~~~s~sK~l-  228 (407)
T 2dkj_A          163 RPKVIVAGASAYP--RFW---DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHP--NP----LP--YAHVVTSTTHKTL-  228 (407)
T ss_dssp             CCSEEEECCSSCC--SCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSC--CC----TT--TCSEEEEESSGGG-
T ss_pred             CCeEEEEeccccC--CCC---CHHHHHHHHHHcCCEEEEEccccccccccCccC--Cc----cc--cccEEEEeccccC-
Confidence            4455666899998  433   478888999999999999999886 43221110  00    11  2578899999954 


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL  338 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  338 (410)
                       +|+|+||+++  +++++++++.......   ..++++.....++...+...     ..+++++.+++++++++++.+.|
T Consensus       229 -~g~~~G~~~~--~~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L  297 (407)
T 2dkj_A          229 -RGPRGGLILS--NDPELGKRIDKLIFPG---IQGGPLEHVIAGKAVAFFEA-----LQPEFKEYSRLVVENAKRLAEEL  297 (407)
T ss_dssp             -CCCSCEEEEE--SCHHHHHHHHHHHTTT---TCSSCCHHHHHHHHHHHHHH-----HSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCceEEEE--CCHHHHHHHHhhhccc---ccCCCcHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHH
Confidence             5889999854  3367666654432211   11223332222233333211     01345678888999999999999


Q ss_pred             hhccCCCCCccccc-CCcceeeecCC-----CHHHHHHhhhcCcEEEcCC------------C--eEEecC-----CCcc
Q 015283          339 SAKDKSGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD------------G--RISLAG-----LSLA  393 (410)
Q Consensus       339 ~~~~g~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~------------g--Ris~~~-----~~~~  393 (410)
                      + +.|    +.+.. +..++++|+.+     +.+.+.+.+.++||.+.++            +  |++++.     .+++
T Consensus       298 ~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~  372 (407)
T 2dkj_A          298 A-RRG----YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPE  372 (407)
T ss_dssp             H-HTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGG
T ss_pred             H-hCC----ceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHH
Confidence            8 776    34443 34566777643     3444444445679998763            1  999863     5899


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      ++++++++|++++++
T Consensus       373 ~i~~~~~~l~~~~~~  387 (407)
T 2dkj_A          373 EMPLVAELIDRALLE  387 (407)
T ss_dssp             GHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999998764

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.94  E-value=2.3e-25  Score=215.53  Aligned_cols=326  Identities=11%  Similarity=0.094  Sum_probs=212.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-C-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|......|+  .+|.+.+++.+.+.... . ..| +.....++++.+++++ +       .+++++  ++||
T Consensus        76 ~~ylD~~sg~~~~~lgh--~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~v~~--~~sG  142 (439)
T 2oat_A           76 RKYFDFLSSYSAVNQGH--CHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF-N-------YHKVLP--MNTG  142 (439)
T ss_dssp             CEEEESSGGGGTTTTCB--TCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH-T-------CSEEEE--ESSH
T ss_pred             CEEEEccCCcccccCCC--CCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc-C-------CCEEEE--eCCH
Confidence            35678777754223333  36899999988875421 1 123 3445678888888885 2       368988  9999


Q ss_pred             hhHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchhh-hhhhCC------------CCccceeeecCCCcccChhhH
Q 015283          112 TGSLRLAAALIERY-------FPG-AKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGM  170 (410)
Q Consensus       112 t~a~~~~~~~~~~~-------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~~~l  170 (410)
                      ++|++.+.+++..+       .+| |+|++++|+|.++.. .+...|            ..+..+|.       .|++.+
T Consensus       143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l  215 (439)
T 2oat_A          143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL  215 (439)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHH
Confidence            99999987665432       357 899999999976543 444334            23333433       388999


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      ++.++.  ++++++++.+.+|+||. +++.+++++|.++|++||+++|+||+|.+|+..+   ..+.+.. .+...+++ 
T Consensus       216 e~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g---~~~~~~~-~~~~~Di~-  288 (439)
T 2oat_A          216 ERALQD--PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG---RWLAVDY-ENVRPDIV-  288 (439)
T ss_dssp             HHHTTS--TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGG-GTCCCSEE-
T ss_pred             HHHhCC--CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC---cchhHHH-hCCCCcEE-
Confidence            998853  35677776655778896 5689999999999999999999999998776432   1111111 12223433 


Q ss_pred             EecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       250 ~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                        |+||.++ +| +|+||+++   ++++++.+    .......+.+.+.+++.++...|+..      .+  ++..++++
T Consensus       289 --t~sK~l~-~G~~~~G~v~~---~~~~~~~l----~~~~~~~t~~~~~~~~aaa~aal~~~------~~--~~~~~~~~  350 (439)
T 2oat_A          289 --LLGKALS-GGLYPVSAVLC---DDDIMLTI----KPGEHGSTYGGNPLGCRVAIAALEVL------EE--ENLAENAD  350 (439)
T ss_dssp             --EECGGGG-TTSSCCEEEEE---CHHHHTTS----CTTSSCCSSTTCHHHHHHHHHHHHHH------HH--TTHHHHHH
T ss_pred             --Eeccccc-CCCCCeEEEEE---CHHHHhcc----CCCCcccCCCcCHHHHHHHHHHHHHH------hh--hhHHHHHH
Confidence              8999999 68 99999855   66744433    22212222345556655554444321      11  24567788


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccHH
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCE  396 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~  396 (410)
                      ++++++.+.|+ +++.+. +... +..|.+.++.+      +. ++...+++ +||.+.|++    ||+++. .++++++
T Consensus       351 ~~~~~l~~~L~-~l~~~~-~~~~-~~~g~~~~v~l~~~~~~~~~~l~~~l~~-~Gv~v~~~~~~~iRi~~~~~~t~e~i~  426 (439)
T 2oat_A          351 KLGIILRNELM-KLPSDV-VTAV-RGKGLLNAIVIKETKDWDAWKVCLRLRD-NGLLAKPTHGDIIRFAPPLVIKEDELR  426 (439)
T ss_dssp             HHHHHHHHHHT-TSCTTT-EEEE-EEETTEEEEEECCCSSCCHHHHHHHHHH-TTEECCBSSSSEEEECCCTTCCHHHHH
T ss_pred             HHHHHHHHHHH-HhcCCC-cEEE-EeeeeEEEEEEecCccHHHHHHHHHHHH-CCeEEecCCCCEEEEECccCCCHHHHH
Confidence            88899999998 775211 1112 23455555432      23 44566665 699999864    887652 4899999


Q ss_pred             HHHHHHHHHhhh
Q 015283          397 YLADAIIDSYHN  408 (410)
Q Consensus       397 ~~~~~l~~~l~~  408 (410)
                      +++++|++++++
T Consensus       427 ~~l~~l~~~l~~  438 (439)
T 2oat_A          427 ESIEIINKTILS  438 (439)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.94  E-value=2.1e-26  Score=223.67  Aligned_cols=342  Identities=11%  Similarity=0.024  Sum_probs=196.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|......|+.  +|.+.+++.+++...  ..|.+..+..+.++++++++....+.  ..+++++  ++||++
T Consensus        44 ~~ylD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~--~~sGse  115 (448)
T 3dod_A           44 KEYYDGFSSVWLNVHGHR--KKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISPK--KLTRVFY--SDSGAE  115 (448)
T ss_dssp             CEEEETTHHHHTCSSCBS--CHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSCT--TEEEEEE--ESSHHH
T ss_pred             CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCEEEE--eCchHH
Confidence            467899888654455654  699999998887553  22323334445555555555443321  2478999  999999


Q ss_pred             HHHHHHHHHHHh---CC---CCEEEEcCCCCcchhhhhhhCCC-------------CccceeeecCCCcc----------
Q 015283          114 SLRLAAALIERY---FP---GAKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVG----------  164 (410)
Q Consensus       114 a~~~~~~~~~~~---~~---gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~----------  164 (410)
                      |++.+.+++...   ..   +|+|++.+|+|.++.......+.             .+..++.  .+.+.          
T Consensus       116 A~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  193 (448)
T 3dod_A          116 AMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECR  193 (448)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhh
Confidence            999997766543   22   59999999999776543332221             1222332  12121          


Q ss_pred             -cChhhHHHHHhcCCCCcEEEEeCCCC-CCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh
Q 015283          165 -LDFEGMIADIKAAPGGSFILLHGCAH-NPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA  241 (410)
Q Consensus       165 -~d~~~l~~~i~~~~~~~~~ii~~~p~-NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~  241 (410)
                       .|++.+++.+...++++.++++.+++ |++|. +++.+.+++|.++|++||++||+||+|.+|+..+   ..+.... .
T Consensus       194 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~a~~~-~  269 (448)
T 3dod_A          194 DQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTG---KMFACEH-E  269 (448)
T ss_dssp             HHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGG-G
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCccc---chhhhhh-c
Confidence             24788888887322356666666666 88885 4577779999999999999999999999887432   1112111 1


Q ss_pred             hcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHH---HHhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283          242 TRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQ---LKRLARPMYSNPPVHGARIVANVVGNPALFDEWK  317 (410)
Q Consensus       242 ~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~  317 (410)
                      +...++   .+|||.++ +| +|+||+++   ++++++.+...   ........+.+.+.+++.++...|+..+      
T Consensus       270 ~~~~di---~t~sK~l~-~G~~~ig~v~~---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~------  336 (448)
T 3dod_A          270 NVQPDL---MAAGKGIT-GGYLPIAVTFA---TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFE------  336 (448)
T ss_dssp             TCCCSE---EEECGGGG-TTSSCCEEEEE---EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHH------
T ss_pred             CCCCCE---EEeccccc-CCcCceEEEEE---CHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHh------
Confidence            222233   37899998 59 59999755   77744443210   0002222233456666666655554210      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhh--ccCCCCCcccccCCcceeeecCC--C--------------HHHHHHhhhcCcEEE
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSA--KDKSGKDWSFILRQIGMFSFTGL--N--------------KAQSDNMTNKWHVYM  379 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~--~~g~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~ll~~~gi~v  379 (410)
                      +  +...++++++.+++.+.|.+  ..+.   +.... ..|.+.|+.+  +              .++...+++ .||.+
T Consensus       337 ~--~~~~~~~~~~~~~~~~~l~~l~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~  409 (448)
T 3dod_A          337 S--ENIVEQVAEKSKKLHFLLQDLHALPH---VGDIR-QLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRE-LGMLT  409 (448)
T ss_dssp             H--TTHHHHHHHHHHHHHHHHHHHTTSTT---EEEEE-EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTEEC
T ss_pred             c--ccHHHHHHHHHHHHHHHHHHHhcCCC---eEEEE-eeeEEEEEEEccCcccccccchhhHHHHHHHHHHHH-CCcEE
Confidence            0  12233344444444444440  3321   12222 2344555432  1              345666766 59999


Q ss_pred             cCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          380 TKDG---RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       380 ~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .|+|   ||+.+ ..+++++++++++|+++++++
T Consensus       410 ~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  443 (448)
T 3dod_A          410 RPLGDVIAFLPPLASTAEELSEMVAIMKQAIHEV  443 (448)
T ss_dssp             CEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9876   88543 248999999999999998653

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.94  E-value=5.7e-26  Score=219.73  Aligned_cols=330  Identities=13%  Similarity=0.046  Sum_probs=206.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|..-...|+  .+|.+.+++.+.+.......| +.....++++.+++++.       ..+++++  ++||++
T Consensus        56 ~~~lD~~~~~~~~~lG~--~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-------~~~~v~~--~~sgse  123 (434)
T 2epj_A           56 ARIVDLVLAYGPLILGH--KHPRVLEAVEEALARGWLYGA-PGEAEVLLAEKILGYVK-------RGGMIRF--VNSGTE  123 (434)
T ss_dssp             CEEEESSGGGTTCTTCB--TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHHC-------TTCEEEE--ESSHHH
T ss_pred             CEEEEcccchhcccCCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCCHHH
Confidence            45789988864223344  368999999888765322334 33445677777777752       1578999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-h-------------CCCC------ccceeeecCCCcccChhhHHHH
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D-------------ARVP------WSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~-------------~g~~------~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                      |++.+.++.+.+.++++|++.+|+|.++..... .             .|..      +..++.       .|++.+++.
T Consensus       124 A~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  196 (434)
T 2epj_A          124 ATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV  196 (434)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence            999986654445677899999999987654221 1             1221      222222       378999988


Q ss_pred             HhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283          174 IKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS  252 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  252 (410)
                      +++.+++++++++++.+|+||.+. +.+.+++|.++|++||+++|+||+|.+|..+    ....... .+...++   .|
T Consensus       197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g----~~~~~~~-~~~~~di---~s  268 (434)
T 2epj_A          197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLG----LEGAQGY-FNIEGDI---IV  268 (434)
T ss_dssp             HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSS----TTHHHHH-HTCCCSE---EE
T ss_pred             HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCC----cchhhHH-hCCCCCe---ee
Confidence            874223566666555567899866 6888999999999999999999999977422    1122212 2222333   48


Q ss_pred             ccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283          253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ  332 (410)
Q Consensus       253 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  332 (410)
                      +||.++. |+|+||+++   ++++++.+.... ......+.+.+.+++.++...|+..      .+  ++..++++++++
T Consensus       269 ~sK~l~~-G~~~G~v~~---~~~~~~~l~~~~-~~~~~~t~~~~~~~~aa~~a~l~~~------~~--~~~~~~~~~~~~  335 (434)
T 2epj_A          269 LGKIIGG-GFPVGAVAG---SREVMSLLTPQG-KVFNAGTFNAHPITMAAGLATLKAL------EE--EPVYSVSREAAK  335 (434)
T ss_dssp             EEGGGGT-TSSCEEEEE---CHHHHTTBTTTS-SBCCCCTTTTCHHHHHHHHHHHHHH------HH--SCHHHHHHHHHH
T ss_pred             ecchhcC-Ccceeeeee---cHHHHHhhccCC-CcccCCCCCcCHHHHHHHHHHHHHH------Hh--cCHHHHHHHHHH
Confidence            9999995 999999855   677444332100 0001112234555555554444311      10  234456666666


Q ss_pred             HHHHHhhhcc----CCCCCcccccCCcceeeecCCC------------------HHHHHHhhhcCcEEEcCCC--eEEec
Q 015283          333 KLFDSLSAKD----KSGKDWSFILRQIGMFSFTGLN------------------KAQSDNMTNKWHVYMTKDG--RISLA  388 (410)
Q Consensus       333 ~l~~~l~~~~----g~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ll~~~gi~v~~~g--Ris~~  388 (410)
                      ++.+.|+ ++    +.    ....+..|.|+|+.+.                  .++...+++ +||.+.|++  |+.++
T Consensus       336 ~l~~~L~-~~~~~~~~----~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~~~  409 (434)
T 2epj_A          336 ALEEAAS-EVLDRTGL----PYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLR-RGVFIAPSNLEAVFTG  409 (434)
T ss_dssp             HHHHHHH-HHHHHHTC----CEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTTSCEECC
T ss_pred             HHHHHHH-HHHhhCCC----cEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHH-CCeEEeccCCCcEEEe
Confidence            6666665 54    42    2112233455554321                  124556655 699999986  55433


Q ss_pred             -CCCcccHHHHHHHHHHHhhhc
Q 015283          389 -GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       389 -~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       ..+++++++++++|+++++++
T Consensus       410 ~~~t~e~i~~~l~~l~~~l~~~  431 (434)
T 2epj_A          410 LPHQGEALEIAVEGLRSSLKTV  431 (434)
T ss_dssp             TTCSHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHH
Confidence             248999999999999988653

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.94  E-value=9.6e-26  Score=215.72  Aligned_cols=316  Identities=16%  Similarity=0.097  Sum_probs=213.7

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      +.+||+.|.+      +. ++.+.+++.+.+..   ..|.+..+..++++++++++..        +++++  +++|+++
T Consensus        31 ~~id~~~~~~------~~-~~~v~~a~~~~~~~---~~y~~~~~~~~l~~~la~~~~~--------~~~v~--~~~Gt~a   90 (399)
T 2oga_A           31 PFLDLKAAYE------EL-RAETDAAIARVLDS---GRYLLGPELEGFEAEFAAYCET--------DHAVG--VNSGMDA   90 (399)
T ss_dssp             CSCCHHHHHH------HT-HHHHHHHHHHHHHH---TCCSSSHHHHHHHHHHHHHTTS--------SEEEE--ESCHHHH
T ss_pred             cccccCcCCC------CC-CHHHHHHHHHHHhc---CCCCCchhHHHHHHHHHHHHCC--------CeEEE--ecCHHHH
Confidence            6789998876      22 48888888887754   2466667889999999999632        24556  7888999


Q ss_pred             HHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          115 LRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       115 ~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      +..+  +... +.+||+|++++|+|..+...++..|.+++.+++. ++++.+|++.+++.+++   ++++++   |+|||
T Consensus        91 ~~~~--l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~n~t  161 (399)
T 2oga_A           91 LQLA--LRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPH-EDHPTLDPLLVEKAITP---RTRALL---PVHLY  161 (399)
T ss_dssp             HHHH--HHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-SSSSSBCHHHHHHHCCT---TEEEEC---CBCGG
T ss_pred             HHHH--HHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecC-CCCCCcCHHHHHHhcCC---CCeEEE---EeCCc
Confidence            9887  3333 5699999999999999999999999999999874 33578999999999875   566666   67999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEe
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~  271 (410)
                      |.+.+   +++|.++|+++|+++|+|++|..+...  +...+      ... .++++.|+  ||.++.+| |.||+  ++
T Consensus       162 G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~--~~~~~------~~~-~di~~~S~~~sK~~~~~G-~~g~~--~~  226 (399)
T 2oga_A          162 GHPAD---MDALRELADRHGLHIVEDAAQAHGARY--RGRRI------GAG-SSVAAFSFYPGKNLGCFG-DGGAV--VT  226 (399)
T ss_dssp             GCCCC---HHHHHHHHHHHTCEECEECTTCTTCEE--TTEET------TCT-TCEEEEECCTTSSSCCSS-CCEEE--EE
T ss_pred             CCccC---HHHHHHHHHHcCCEEEEECcccccCcc--CCeec------ccc-cCEEEEeCCCCccCCcCC-ceEEE--Ee
Confidence            99765   678888899999999999998755321  11111      111 25788888  79999879 89997  44


Q ss_pred             CCchhHHHHHHHHHhhcc--------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          272 SSSDLAARVKSQLKRLAR--------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .++++++++.........        ......+.+.+.++...++.          +++..++.+++++++.+.|. ++.
T Consensus       227 ~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----------~~~~~~~~~~~~~~l~~~L~-~~~  295 (399)
T 2oga_A          227 GDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH----------LDSWNGRRSALAAEYLSGLA-GLP  295 (399)
T ss_dssp             SCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT----------HHHHHHHHHHHHHHHHHHTT-TCT
T ss_pred             CCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHhc-cCC
Confidence            557766665543221100        00012334444443333322          23344555667778888887 662


Q ss_pred             CCCCcccc-cCCcceeeec-----CCCHHH-HHHhhhcCcEEEcCC-----------------------------C--eE
Q 015283          344 SGKDWSFI-LRQIGMFSFT-----GLNKAQ-SDNMTNKWHVYMTKD-----------------------------G--RI  385 (410)
Q Consensus       344 ~~~~~~~~-~~~~~~~~~~-----~~~~~~-~~~ll~~~gi~v~~~-----------------------------g--Ri  385 (410)
                      .   +.+. .+..+.++|.     ..+.+. ...|. ++||.+.++                             +  ||
T Consensus       296 g---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi  371 (399)
T 2oga_A          296 G---IGLPVTAPDTDPVWHLFTVRTERRDELRSHLD-ARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSL  371 (399)
T ss_dssp             T---CBCCCCCTTEECCCSSEEEECSSHHHHHHHHH-HTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEE
T ss_pred             C---ccccCCCCCCcceeEEEEEECCCHHHHHHHHH-HCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEc
Confidence            1   2332 2333444442     124444 45554 469988642                             2  77


Q ss_pred             EecC-CCcccHHHHHHHHHHHhhhc
Q 015283          386 SLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       386 s~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++.. .++++++++++.|+++++++
T Consensus       372 ~~~~~~t~edi~~~~~~l~~~~~~l  396 (399)
T 2oga_A          372 PIGPHLERPQALRVIDAVREWAERV  396 (399)
T ss_dssp             CCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            7643 48999999999999998764

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.94  E-value=1.3e-25  Score=219.15  Aligned_cols=346  Identities=9%  Similarity=0.030  Sum_probs=216.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|......|+.  +|.+.+++.+++.... +.+ +..+..+.++++++++.+..+.  ..+++++  ++||++
T Consensus        54 ~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~~-~~~-~~~~~~~~~~~la~~l~~~~~~--~~~~v~~--~~sGse  125 (476)
T 3i5t_A           54 RRLIDGPAGMWCAQVGYG--RREIVDAMAHQAMVLP-YAS-PWYMATSPAARLAEKIATLTPG--DLNRIFF--TTGGST  125 (476)
T ss_dssp             CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHHHCC-CCC-TTTCBCHHHHHHHHHHHTTSST--TCCEEEE--ESSHHH
T ss_pred             CEEEECCCchhhccCCCC--CHHHHHHHHHHHHhcc-Ccc-cCccCCHHHHHHHHHHHhcCCC--CcCEEEE--eCchHH
Confidence            467899888653455654  6899999988875521 112 2245567778888887665532  3568999  999999


Q ss_pred             HHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCCCCcc-------------ceeeecC-CCcccC-------
Q 015283          114 SLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARVPWS-------------EYRYYDP-KTVGLD-------  166 (410)
Q Consensus       114 a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~~-~~~~~d-------  166 (410)
                      |++.+++++...      ..++.|++.+|+|.++.......+....             .++.... ..+..|       
T Consensus       126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  205 (476)
T 3i5t_A          126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDD  205 (476)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHH
Confidence            999997777554      4568999999999887654443332211             1211000 001112       


Q ss_pred             -hhhHHHHHhcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283          167 -FEGMIADIKAAP-GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR  243 (410)
Q Consensus       167 -~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~  243 (410)
                       ++++++.+.+.. +++.++++.+++|++|. +++.+.+++|.++|++||+++|+||+|.+|+..+   ..+......+.
T Consensus       206 ~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G---~~~~~~~~~~v  282 (476)
T 3i5t_A          206 LVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCG---EWFASEKVFGV  282 (476)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSCHHHHTTCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---CceeeecccCC
Confidence             678888886422 35677777888888886 7788889999999999999999999999987432   22232211222


Q ss_pred             CCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH---HhhccCcccCCChhHHHHHHHHhCChhhHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KRLARPMYSNPPVHGARIVANVVGNPALFDEWKAE  319 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~  319 (410)
                      .++++   ++||.++ .| +|+|++++   ++++++.+....   .......+.+.+.+++.++...|+..      .+ 
T Consensus       283 ~pdi~---t~sK~l~-~G~~plg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~------~~-  348 (476)
T 3i5t_A          283 VPDII---TFAKGVT-SGYVPLGGLAI---SEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELM------ER-  348 (476)
T ss_dssp             CCSEE---EECGGGG-TTSSCCEEEEE---CHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHH------HH-
T ss_pred             Ccchh---hhhhhhc-CCCcCeEEEEE---CHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHH------Hh-
Confidence            23443   6899998 58 99999755   777544432210   00011123345566666665554421      00 


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C-------------H-HHHHHhhhcCcEEEcCCC
Q 015283          320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-------------K-AQSDNMTNKWHVYMTKDG  383 (410)
Q Consensus       320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-------------~-~~~~~ll~~~gi~v~~~g  383 (410)
                       +...++++++.+++.+.|+ +++....+....+.+ .|.++.+  +             . .+...+++ .||.+.|.|
T Consensus       349 -~~~~~~~~~~~~~l~~~L~-~l~~~~~v~~v~~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~g  424 (476)
T 3i5t_A          349 -EGIVDQAREMADYFAAALA-SLRDLPGVAETRSVG-LVGCVQCLLDPTRADGTAEDKAFTLKIDERCFE-LGLIVRPLG  424 (476)
T ss_dssp             -TTHHHHHHHHHHHHHHHHH-TTTTSTTEEEEEEET-TEEEEEECCC-----CCHHHHHHHHHHHHHHHH-TTEECEEET
T ss_pred             -HHHHHHHHHHHHHHHHHHH-HHhcCCCeEEEEecC-ceeEEEEecCccccccccchhHHHHHHHHHHHH-CCCEEEecC
Confidence             2445666777777777776 553101122333443 3433321  1             1 23456665 599999866


Q ss_pred             ---eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283          384 ---RISLA-GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       384 ---Ris~~-~~~~~~i~~~~~~l~~~l~~  408 (410)
                         ||+.+ ..+++++++++++|++++++
T Consensus       425 ~~iRi~p~l~~t~e~i~~~l~~l~~~l~~  453 (476)
T 3i5t_A          425 DLCVISPPLIISRAQIDEMVAIMRQAITE  453 (476)
T ss_dssp             TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence               88843 24999999999999999865

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.94  E-value=1.4e-25  Score=213.66  Aligned_cols=307  Identities=14%  Similarity=0.060  Sum_probs=205.3

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCC
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA  129 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd  129 (410)
                      |.+.+.+.+++.+.+..+. ..|.+..+..++|+++++++..       ++.|++  + +||+++.++.  ... +.+||
T Consensus        13 p~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~~~-------~~~i~~--~-sGt~al~~~l--~~l~~~~gd   79 (388)
T 1b9h_A           13 PQYDDAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHHGA-------AHALAV--T-NGTHALELAL--QVMGVGPGT   79 (388)
T ss_dssp             SCCCHHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHTTC-------SEEEEE--S-CHHHHHHHHH--HHTTCCTTC
T ss_pred             CCCCHHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHhCC-------CeEEEe--C-CHHHHHHHHH--HHcCCCCcC
Confidence            3345899999988876543 4566778899999999999633       245665  4 5589999873  333 56999


Q ss_pred             EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283          130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI  209 (410)
Q Consensus       130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~  209 (410)
                      +|+++.|+|..+...++..|++++.+++. .+++.+|++.+++.+++   ++++++   |+||||.+.   ++++|.++|
T Consensus        80 ~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~n~tG~~~---~l~~i~~la  149 (388)
T 1b9h_A           80 EVIVPAFTFISSSQAAQRLGAVTVPVDVD-AATYNLDPEAVAAAVTP---RTKVIM---PVHMAGLMA---DMDALAKIS  149 (388)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCCBCHHHHHHHCCT---TEEEEC---CBCGGGCCC---CHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcCc---CceEEE---EeCCccCcC---CHHHHHHHH
Confidence            99999999999999999999999999884 34578999999999864   566665   899999975   467788889


Q ss_pred             HHcCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh--HHHHHHHHHh
Q 015283          210 QEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL--AARVKSQLKR  286 (410)
Q Consensus       210 ~~~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~--~~~~~~~~~~  286 (410)
                      ++||+++|+|++|..+. +.+  .   .+    ... .++.+.||||..+++|.|+||++  ++++++  ++++... ..
T Consensus       150 ~~~~~~li~D~a~~~g~~~~~--~---~~----~~~-~~i~~~S~s~~K~l~g~~~G~~~--~~~~~~~~~~~~~~~-~~  216 (388)
T 1b9h_A          150 ADTGVPLLQDAAHAHGARWQG--K---RV----GEL-DSIATFSFQNGKLMTAGEGGAVV--FPDGETEKYETAFLR-HS  216 (388)
T ss_dssp             HHHTCCBCEECTTCTTCEETT--E---EG----GGS-SSCEEEECCTTSSSCSSSCEEEE--ECTTCHHHHHHHHHH-TB
T ss_pred             HHcCCEEEEecchhcCCccCC--e---ec----ccc-cceEEEEccCCCcccCCCeEEEE--ECCHHHHHHHHHHHH-Hh
Confidence            99999999999987533 211  1   11    111 26788899977777778999974  344444  4444321 11


Q ss_pred             hcc---------C--ccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc--
Q 015283          287 LAR---------P--MYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL--  352 (410)
Q Consensus       287 ~~~---------~--~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~--  352 (410)
                      ...         .  .+. ..+.....++...+          +++++.+++++++++++.+.|+ +++.   +.+..  
T Consensus       217 ~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~----------~~l~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~~  282 (388)
T 1b9h_A          217 CGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQL----------ARLDEQIAVRDERWTLLSRLLG-AIDG---VVPQGGD  282 (388)
T ss_dssp             TTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHH----------TTHHHHHHHHHHHHHHHHHHHH-TSTT---CEECCCC
T ss_pred             CCCCccCccceeecccccCCcCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHhc-cCCC---ccccCCC
Confidence            100         0  011 12222222222221          2234566777888999999998 7621   33332  


Q ss_pred             ----CCcceeeecCCC------HH-HHHHhhhcCcEEEcCC---------------------------C----------e
Q 015283          353 ----RQIGMFSFTGLN------KA-QSDNMTNKWHVYMTKD---------------------------G----------R  384 (410)
Q Consensus       353 ----~~~~~~~~~~~~------~~-~~~~ll~~~gi~v~~~---------------------------g----------R  384 (410)
                          +.+++++|+.+.      .+ +...|.+ +||.+.++                           +          |
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  361 (388)
T 1b9h_A          283 VRADRNSHYMAMFRIPGLTEERRNALVDRLVE-AGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVW  361 (388)
T ss_dssp             TTCCBCCCSEEEEECTTCCHHHHHHHHHHHHH-TTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEE
T ss_pred             cCCCccceEEEEEEeCCcCcccHHHHHHHHHH-CCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEE
Confidence                344667776442      22 3455554 69988542                           0          5


Q ss_pred             EEec-CC-CcccHHHHHHHHHHHhhh
Q 015283          385 ISLA-GL-SLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       385 is~~-~~-~~~~i~~~~~~l~~~l~~  408 (410)
                      |++. .+ |++|++++++.|++++++
T Consensus       362 l~~~~~~~t~edi~~~~~~l~~~~~~  387 (388)
T 1b9h_A          362 LHHRVLLAGEPELHATAEIIADAVAR  387 (388)
T ss_dssp             EEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence            5544 36 789999999999998865

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.94  E-value=7.4e-26  Score=219.83  Aligned_cols=343  Identities=12%  Similarity=0.029  Sum_probs=215.2

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCc-cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~-~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ..||+..|......|+.  +|.+.+++.+++... +.. .+.+.....++++.+++++..      ..+++++  ++||+
T Consensus        76 ~ylD~~s~~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~------~~~~v~~--~~sGs  145 (457)
T 3tfu_A           76 EVLDAMSSWWTAIHGHG--HPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPA------GLDTVFF--SDSGS  145 (457)
T ss_dssp             EEEETTHHHHTCTTCBT--CHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSST------TEEEEEE--ESSHH
T ss_pred             EEEECCCcHhhhccCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCC------CcCEEEE--eCcHH
Confidence            67888887543355553  689999988877542 111 222344556777777777421      2468999  99999


Q ss_pred             hHHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCC--------------CCccceeeecCCCcccChhhHHH
Q 015283          113 GSLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDAR--------------VPWSEYRYYDPKTVGLDFEGMIA  172 (410)
Q Consensus       113 ~a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g--------------~~~~~v~~~~~~~~~~d~~~l~~  172 (410)
                      +|++.+++++..+      ..++.|++.+++|.++.......+              ..+..++.........|++.+++
T Consensus       146 eA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~  225 (457)
T 3tfu_A          146 VSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEA  225 (457)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHH
Confidence            9999987666543      234589999999977654333321              12233333111112247889998


Q ss_pred             HHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          173 DIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       173 ~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      .+++.+++++++++.+ ++||+|.+. +.+.+++|.++|++||+++|+||+|.+|+..+   ..+.... .+..++++  
T Consensus       226 ~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G---~~~a~~~-~~~~pdii--  299 (457)
T 3tfu_A          226 QLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTG---ALFAADH-AGVSPDIM--  299 (457)
T ss_dssp             HHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHH-HTCCCSEE--
T ss_pred             HHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCcccc---chhHhHh-cCCCceEE--
Confidence            8874334677777777 899999876 67779999999999999999999999987432   1222222 22333444  


Q ss_pred             ecccccccccC-CCcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       251 ~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                       ||||.++ +| +|+||+++   ++++++.+...-.. .....+.+.+.+++.++...|+..      .+  +...++++
T Consensus       300 -t~sK~l~-gG~~~lG~v~~---~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~------~~--~~~~~~~~  366 (457)
T 3tfu_A          300 -CVGKALT-GGYLSLAATLC---TADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELL------LG--QDWRTRIT  366 (457)
T ss_dssp             -EECGGGG-TTSSCCEEEEE---EHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHH------HT--SCHHHHHH
T ss_pred             -EEChhhh-CCCcceEEEEE---cHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHH------hh--hHHHHHHH
Confidence             8999987 45 79999855   77755554321011 111122345566666654444311      00  13455666


Q ss_pred             HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC---eEEecC-CCcccHHHHH
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG---RISLAG-LSLAKCEYLA  399 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g---Ris~~~-~~~~~i~~~~  399 (410)
                      ++.+++.+.|+ ++.....+....+. |.|.++.+    + .++...+++ +||.+.|.+   ||+.+. .+++++++++
T Consensus       367 ~~~~~l~~~L~-~l~~~~~v~~vr~~-G~~~~i~l~~~~~~~~~~~~l~~-~Gv~v~~~~~~lRi~p~~~~t~eei~~~l  443 (457)
T 3tfu_A          367 ELAAGLTAGLD-TARALPAVTDVRVC-GAIGVIECDRPVDLAVATPAALD-RGVWLRPFRNLVYAMPPYICTPAEITQIT  443 (457)
T ss_dssp             HHHHHHHHHHG-GGGGSTTEEEEEEC-SSCEEEEESSCCCHHHHHHHHHH-TTEECCCBTTEEEECCCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHH-HHhcCCCeeeeecC-CeEEEEEECCcccHHHHHHHHHH-CCeEEEecCCEEEEECCCCCCHHHHHHHH
Confidence            67777777777 65310112223333 45555433    2 345667766 599999976   887543 4899999999


Q ss_pred             HHHHHHhhhc
Q 015283          400 DAIIDSYHNV  409 (410)
Q Consensus       400 ~~l~~~l~~~  409 (410)
                      ++|+++++++
T Consensus       444 ~~L~~~l~~~  453 (457)
T 3tfu_A          444 SAMVEVARLV  453 (457)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHh
Confidence            9999998764

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.94  E-value=7.8e-26  Score=218.43  Aligned_cols=336  Identities=12%  Similarity=0.020  Sum_probs=197.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|......|+.  +|.+.+++.+.+.......| +.....++++.+++++. .      .+++++  ++||++
T Consensus        53 ~~ylD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~-~------~~~v~~--~~sGse  120 (429)
T 4e77_A           53 KAYIDYVGSWGPMILGHN--HPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLVP-T------MDMVRM--VNSGTE  120 (429)
T ss_dssp             CEEEESSGGGTTCTTCBT--CHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHST-T------CSEEEE--ESSHHH
T ss_pred             CEEEECCCchhccccCCC--CHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhCC-C------CCEEEE--eCcHHH
Confidence            467899888753445553  69999999888765432334 55566678888887753 1      578999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCC--------ccceeee-cCC---CcccChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVP--------WSEYRYY-DPK---TVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~--------~~~v~~~-~~~---~~~~d~~~l~~~i~~~~~~  180 (410)
                      +++.+.++...+.+++.|++.+++|.++..... ..+..        ...++.. ...   -.-.|++.+++.+++.+++
T Consensus       121 a~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  200 (429)
T 4e77_A          121 ATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQE  200 (429)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTT
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCC
Confidence            999997766555577899999999877654211 11100        0000000 000   0012789999999864445


Q ss_pred             cEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          181 SFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~--~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      +++++ ++|+|++|.++.  .+.+++|.++|++||+++|+||+|.+|..+   . ...... ....+++   .|+||.++
T Consensus       201 ~~~vi-~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g---~-~~~~~~-~~~~pdi---~t~sK~~~  271 (429)
T 4e77_A          201 VACII-VEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA---L-AGAQDY-YHVIPDL---TCLGKIIG  271 (429)
T ss_dssp             EEEEE-ECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTB---T-TCHHHH-TTCCCSE---EEEEGGGG
T ss_pred             EEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccC---c-chHHHh-cCCCCCe---eeeccccc
Confidence            56555 566666544333  444999999999999999999999988321   1 112212 2222233   48999999


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                       +|+|+||+++   ++++++.+......... .+.+.+.+++.++...|+   +.++       .++.++..+..++.|.
T Consensus       272 -~G~~~G~~~~---~~~~~~~l~~~~~~~~~-~t~~~~~~~~aaa~aal~~~~~~~~-------~~~~~~~~~~l~~~L~  339 (429)
T 4e77_A          272 -GGMPVGAFGG---RREVMNALAPTGPVYQA-GTLSGNPIAMAAGFACLTEISQVGV-------YETLTELTDSLATGLR  339 (429)
T ss_dssp             -TTSCCEEEEE---CHHHHTTBTTTSSBCC---CCCCCHHHHHHHHHHHHHHTSTTH-------HHHHHHHHHHHHHHHH
T ss_pred             -CCCCeEEEEE---CHHHHHHhccCCCcccc-CCCCCCHHHHHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHH
Confidence             7999999755   77754443221000111 122455555555544443   3222       1222222222333333


Q ss_pred             HHhhhccCCCCCcccccCCcceeeecCC--C-----------------HHHHHHhhhcCcEEEcCCC--eEEecC-CCcc
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMFSFTGL--N-----------------KAQSDNMTNKWHVYMTKDG--RISLAG-LSLA  393 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~ll~~~gi~v~~~g--Ris~~~-~~~~  393 (410)
                      +.+. +.+.    ....+..|.|.++.+  .                 .++...+++ +||.+.+++  |+.+.. .+++
T Consensus       340 ~~~~-~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~t~e  413 (429)
T 4e77_A          340 HAAK-EENI----PLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLE-EGVYLAPSAFEAGFMSLAHSNE  413 (429)
T ss_dssp             HHHH-HTTC----CCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHH-TTEECCSSTTSCEECCTTCCHH
T ss_pred             HHHH-hCCC----ceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHH-CCeEEeecCCCCEEEeccCCHH
Confidence            3333 3342    222333455555433  1                 344566666 599999986  554432 4999


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      ++++++++|++++++
T Consensus       414 ~i~~~l~~l~~~l~~  428 (429)
T 4e77_A          414 DIQKTVNAARRCFAK  428 (429)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999875

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.94  E-value=1.2e-25  Score=217.19  Aligned_cols=327  Identities=11%  Similarity=0.099  Sum_probs=203.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...+|+..|......|+  .+|.+.+++.+++.....  ..| +.....++++.+++++    +    .+++++  ++||
T Consensus        65 ~~ylD~~~g~~~~~lgh--~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~sG  131 (433)
T 1z7d_A           65 KRYYDFLSAYSSVNQGH--CHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL----G----YDKVLM--MNTG  131 (433)
T ss_dssp             CEEEESSHHHHTTTTCB--TCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH----T----CSEEEE--ESSH
T ss_pred             CEEEEcccchhhcccCC--CCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc----C----CCeEEE--eCCH
Confidence            35678887754223333  368999999888754211  123 3344567888888875    2    468988  9999


Q ss_pred             hhHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchhh-hhhhCC------------CCccceeeecCCCcccChhhH
Q 015283          112 TGSLRLAAALIERY-------FPG-AKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGM  170 (410)
Q Consensus       112 t~a~~~~~~~~~~~-------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~~~l  170 (410)
                      ++|++.+.+++..+       .+| |+|++++|+|.++.. .+...|            ..+..+|.       .|++.+
T Consensus       132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l  204 (433)
T 1z7d_A          132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL  204 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence            99999987665432       367 999999999987643 333333            12333332       388999


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      ++.++.  ++++++++++.+|+||.+ ++.+++++|.++|++||+++|+||+|.+|+..+   ..+.... .+...+++ 
T Consensus       205 e~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g---~~~~~~~-~~~~~di~-  277 (433)
T 1z7d_A          205 EEELKD--PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTG---KLLCVHH-YNVKPDVI-  277 (433)
T ss_dssp             HHHHTS--TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGG-GTCCCSEE-
T ss_pred             HHHhCC--CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCC---cchhhHh-cCCCCCEE-
Confidence            999852  356777766567789975 688899999999999999999999998776432   1111111 12223433 


Q ss_pred             EecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       250 ~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                        |+||.++ +| +|+||+++   ++++++.+    .......+.+.+.+++.++...|+..      .+  ++..++++
T Consensus       278 --t~sK~l~-~G~~~~G~v~~---~~~~~~~l----~~~~~~~t~~~~~~~~aaa~aal~~~------~~--~~~~~~~~  339 (433)
T 1z7d_A          278 --LLGKALS-GGHYPISAVLA---NDDIMLVI----KPGEHGSTYGGNPLAASICVEALNVL------IN--EKLCENAE  339 (433)
T ss_dssp             --EECGGGG-TTSSCCEEEEE---CHHHHTTC----CTTCCCCTTTTCHHHHHHHHHHHHHH------HH--TTHHHHHH
T ss_pred             --EECcccc-CCCCCeEEEEE---CHHHHhhh----ccccccccCCCCHHHHHHHHHHHHHH------Hh--ccHHHHHH
Confidence              8999999 79 99999855   66744433    22212222345556655554444321      11  13456667


Q ss_pred             HHHHHHHHHhhhcc--CCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccH
Q 015283          329 NVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKC  395 (410)
Q Consensus       329 ~~~~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i  395 (410)
                      ++++++.+.|+ ++  +.+. +.... ..|.++|+.+     +. ++...+++ +||.+.|++    ||+++. .+++++
T Consensus       340 ~~~~~l~~~L~-~l~~~~~~-~~~~~-~~g~~~~i~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~iRi~~~~~~t~e~i  415 (433)
T 1z7d_A          340 KLGGPFLENLK-RELKDSKI-VRDVR-GKGLLCAIEFKNELVNVLDICLKLKE-NGLITRDVHDKTIRLTPPLCITKEQL  415 (433)
T ss_dssp             HHHHHHHHHHH-HHHTTCTT-EEEEE-EETTEEEEEECTTTCCHHHHHHHHHH-TTEECCEETTTEEEECCCTTCCHHHH
T ss_pred             HHHHHHHHHHH-HHHHhCCC-eEEEE-eeeeEEEEEEccChhHHHHHHHHHHH-CCeEEecCCCCEEEEECCcCCCHHHH
Confidence            77777777777 65  3211 11222 3455555533     23 34566665 699999853    887653 489999


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      ++++++|+++++++
T Consensus       416 ~~~l~~l~~~l~~~  429 (433)
T 1z7d_A          416 DECTEIIVKTVKFF  429 (433)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988653

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.94  E-value=6.2e-26  Score=220.66  Aligned_cols=330  Identities=13%  Similarity=0.005  Sum_probs=196.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||++.|......|+  .+|.+.+++.+.+....  .|   .+..++++++++++....+   ..+++++  ++||++
T Consensus        57 ~~~iD~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~---~~~~v~~--~~gg~e  124 (453)
T 2cy8_A           57 NVYLDFFGGHGALVLGH--GHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP---SIRKLRF--TGSGTE  124 (453)
T ss_dssp             CEEEESCTTTTSCTTCB--TCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT---TCSEEEE--ESCHHH
T ss_pred             CEEEECcccHhhcccCC--CCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEE--eCCHHH
Confidence            45789988864223344  36899999988875532  23   2355788888888765542   3678999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-----------CCCCc----cceeeecCCCcccChhhHHHHHhcCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-----------ARVPW----SEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-----------~g~~~----~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      |++.+.++.+.+.++++|++.+|+|.++......           .|...    ..+.. +   + .|++.+++.+++.+
T Consensus       125 A~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~---~-~d~~~le~~l~~~~  199 (453)
T 2cy8_A          125 TTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI-R---P-DDIEGMREVFANHG  199 (453)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEECC----------------------------CGGGEEEE-C---T-TCHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec-C---C-CCHHHHHHHHHhcC
Confidence            9999866544355668999999999876543321           12211    01111 1   1 38899998887422


Q ss_pred             CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                      ++++++++++.+||||.+ .+.+++++|.++|++||++||+||+|.++..+    ....... .+...++   .|+||.+
T Consensus       200 ~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g----~~~~~~~-~~~~~di---~s~sK~l  271 (453)
T 2cy8_A          200 SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVG----NHGMQAL-LDVQPDL---TCLAKAS  271 (453)
T ss_dssp             GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTC----TTHHHHH-HTCCCSE---EEEEGGG
T ss_pred             CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccC----chhhhHH-hCCCCcE---EEEChhh
Confidence            356666655556779976 47899999999999999999999999977321    1222212 2222333   3899999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHH--HHhhccCcccCCChhHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQ--LKRLARPMYSNPPVHGARIVANVVGN-PALFDEWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~l  334 (410)
                      + +|+|+||+++   ++++++.+...  ...... .+.+++.+++.++...|+. .  .       ++..++++++++++
T Consensus       272 ~-~G~~~G~v~~---~~~~~~~l~~~~~~~~~~~-~t~~~n~~~~aa~~aal~~~~--~-------~~~~~~~~~~~~~l  337 (453)
T 2cy8_A          272 A-GGLPGGILGG---REDVMGVLSRGSDRKVLHQ-GTFTGNPITAAAAIAAIDTIL--E-------DDVCAKINDLGQFA  337 (453)
T ss_dssp             G-TTSSCEEEEE---CHHHHTTSSSCC----------CCCCHHHHHHHHHHHHHHH--H-------TTHHHHHHHHHHHH
T ss_pred             h-CCcceEEEec---hHHHHHHhccccCCCceeC-CCCCCCHHHHHHHHHHHHHHh--h-------hhHHHHHHHHHHHH
Confidence            9 5999999855   67755443220  000111 1224555555555444432 1  0       13344555566666


Q ss_pred             HHHhhhcc----CCCCCcccccCCcceeeecCCC------------------------HHHHHHhhhcCcEEEcCCCeEE
Q 015283          335 FDSLSAKD----KSGKDWSFILRQIGMFSFTGLN------------------------KAQSDNMTNKWHVYMTKDGRIS  386 (410)
Q Consensus       335 ~~~l~~~~----g~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~ll~~~gi~v~~~gRis  386 (410)
                      .+.|+ ++    +.   .....+ .|.|+|+.+.                        .++...+++ +||.+.|++|+.
T Consensus       338 ~~~L~-~~~~~~~~---~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gv~v~~~~~~~  411 (453)
T 2cy8_A          338 REAMN-HLFARKGL---NWLAYG-RFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALIL-EGVDIGGRGSVF  411 (453)
T ss_dssp             HHHHH-HHHHHTTC---CEEEEC-CTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHH-TTEECBTTTEEE
T ss_pred             HHHHH-HHHhhCCC---cEEEEE-eeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHH-CCeEEeCCCCEE
Confidence            66665 43    32   112333 3456555321                        234556665 699998877443


Q ss_pred             ec-CCCcccHHHHHHHHHHHhhh
Q 015283          387 LA-GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       387 ~~-~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++ ..+++++++++++|++++.+
T Consensus       412 l~~~~t~~~i~~~l~~l~~~l~~  434 (453)
T 2cy8_A          412 LSAQHEREHVEHLVTTFDRVLDR  434 (453)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             eeccCCHHHHHHHHHHHHHHHHH
Confidence            32 24899999999999998765

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.94  E-value=7.4e-25  Score=211.26  Aligned_cols=317  Identities=15%  Similarity=0.031  Sum_probs=212.8

Q ss_pred             eeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283           38 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR  116 (410)
Q Consensus        38 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~  116 (410)
                      +|+.|.|    ..+. |+.+.+++.+.+..+   .|++ ..+..++|+++++++..        +++++  ++||++++.
T Consensus        20 ~l~~~~p----~~~~-p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~   81 (424)
T 2po3_A           20 PLLVGRP----NRID-RARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAGV--------RHAVA--TCNATAGLQ   81 (424)
T ss_dssp             CEETTCC----CCCC-HHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHTS--------SEEEE--ESCHHHHHH
T ss_pred             cccccCC----CCCC-hHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHH
Confidence            6888877    3333 678888888877543   4766 68899999999999732        47888  999999999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC
Q 015283          117 LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID  196 (410)
Q Consensus       117 ~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~  196 (410)
                      ++...   +.+||+|++++|+|..+...+...|++++.+++. .+++.+|++++++.+++   ++++++++   ||||..
T Consensus        82 ~~l~~---l~~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~---~~~~v~~~---~~tG~~  151 (424)
T 2po3_A           82 LLAHA---AGLTGEVIMPSMTFAATPHALRWIGLTPVFADID-PDTGNLDPDQVAAAVTP---RTSAVVGV---HLWGRP  151 (424)
T ss_dssp             HHHHH---HTCCSEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTSSBCHHHHGGGCCT---TEEEEEEE---CGGGCC
T ss_pred             HHHHH---cCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhhCc---CCcEEEEE---CCCCCc
Confidence            98433   3478999999999999999999999999999884 34678899999988864   56666643   589984


Q ss_pred             CCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283          197 PTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD  275 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~  275 (410)
                         .++++|+++|+++|+++|+|++|. ++.+.+   .  .+    ....+ +++.||||..+++|+|+||++  +++++
T Consensus       152 ---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~---~--~~----~~~~d-i~~~S~sk~K~l~~~~~G~~v--~~~~~  216 (424)
T 2po3_A          152 ---CAADQLRKVADEHGLRLYFDAAHALGCAVDG---R--PA----GSLGD-AEVFSFHATKAVNAFEGGAVV--TDDAD  216 (424)
T ss_dssp             ---CCHHHHHHHHHHTTCEEEEECTTCTTCEETT---E--ET----TSSSS-EEEEECCTTSSSCCSSCEEEE--ESCHH
T ss_pred             ---CCHHHHHHHHHHcCCEEEEECccccCCeECC---e--ec----ccccC-EEEEeCCCCCCccCCCCeEEE--eCCHH
Confidence               578888888999999999999988 455321   1  11    11123 889999966666778999984  44477


Q ss_pred             hHHHHHHHHHhhccCccc-----CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          276 LAARVKSQLKRLARPMYS-----NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                      +++++...........+.     ....+.+.++...+.  .     .+.+++..++.+++++++.+.|. +++.   +.+
T Consensus       217 l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~--~-----~~~~~~~~~~~~~~~~~l~~~L~-~~~g---~~~  285 (424)
T 2po3_A          217 LAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLT--S-----LDAFPEVIDRNRRNHAAYREHLA-DLPG---VLV  285 (424)
T ss_dssp             HHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHHHHHTC-SCTT---EEE
T ss_pred             HHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHHHHHhc-cCCC---ccc
Confidence            666665533211110000     000111122211111  1     12345667777788888888888 7621   344


Q ss_pred             cc-CCcc---eeee-c-------CCCHHHHHHhhhcCcEEEcCC--------------------C--e-----EEec---
Q 015283          351 IL-RQIG---MFSF-T-------GLNKAQSDNMTNKWHVYMTKD--------------------G--R-----ISLA---  388 (410)
Q Consensus       351 ~~-~~~~---~~~~-~-------~~~~~~~~~ll~~~gi~v~~~--------------------g--R-----is~~---  388 (410)
                      .. +.++   +++| +       +.+.+.+.+.+.++||.+.+.                    +  |     |+++   
T Consensus       286 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~  365 (424)
T 2po3_A          286 ADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGT  365 (424)
T ss_dssp             CCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCST
T ss_pred             cCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCC
Confidence            43 3222   2322 2       234555555555679998651                    0  3     6664   


Q ss_pred             CCCcccHHHHHHHHHHHhhh
Q 015283          389 GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       389 ~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .++++++++++++|+++++.
T Consensus       366 ~~t~e~i~~~~~~L~~~~~~  385 (424)
T 2po3_A          366 AIGDDDIRRVADLLRLCATR  385 (424)
T ss_dssp             TCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhh
Confidence            35899999999999988754

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.94  E-value=6.8e-26  Score=217.86  Aligned_cols=320  Identities=10%  Similarity=0.034  Sum_probs=202.0

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc-----cCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-----EYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      +.+.|..+.+      ++.++.+.+++.+.+......     .|..  .....++++.+++++..      ++++|++  
T Consensus        28 ~~~yld~~~~------~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--   93 (416)
T 1qz9_A           28 GVIYLDGNSL------GARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGA------RDGEVVV--   93 (416)
T ss_dssp             TCEECCTTTS------CCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTC------CTTSEEE--
T ss_pred             CeEeecCCCc------CCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCC------CcccEEE--
Confidence            4566665543      344788888888877532101     1111  24456788888887532      2578999  


Q ss_pred             cCChhhHHHHHHHHHHHh----CCCCEE-EEcCCCCcchhhhhh----hC--CCCccceeeecCCCcccChhhHHHHHhc
Q 015283          108 GLSGTGSLRLAAALIERY----FPGAKV-LISSPTWGNHKNIFN----DA--RVPWSEYRYYDPKTVGLDFEGMIADIKA  176 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~----~~gd~V-l~~~p~y~~~~~~~~----~~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~  176 (410)
                      ++|+++++..+...+..+    .+||+| +++.++|+.+...+.    ..  |++++.++.         ++++++.+.+
T Consensus        94 ~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~  164 (416)
T 1qz9_A           94 TDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQ  164 (416)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCST
T ss_pred             eCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCC
Confidence            999999998774443223    789975 455568876554332    23  877777764         6788888864


Q ss_pred             CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283          177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN  256 (410)
Q Consensus       177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  256 (410)
                         +++++++++|+||||.+.+   +++|.++|++||+++|+|++|.. +.  ...   .+..+    +.++++.|++|.
T Consensus       165 ---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~-g~--~~~---~~~~~----~~d~~~~s~~K~  228 (416)
T 1qz9_A          165 ---DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA-GA--VPV---DLHQA----GADYAIGCTYKY  228 (416)
T ss_dssp             ---TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT-TT--SCC---CHHHH----TCSEEEECSSST
T ss_pred             ---CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc-cC--cCC---Chhhc----CCCEEEecCccc
Confidence               6788888999999999887   67888889999999999999863 21  111   11111    245888999999


Q ss_pred             ccccCCCc-ceEEEEeCCchhHHHHHHHHHhh-------------------ccCcccCCChhHHHHHHHHhCChhhHHHH
Q 015283          257 LGLYAERI-GAMNVVCSSSDLAARVKSQLKRL-------------------ARPMYSNPPVHGARIVANVVGNPALFDEW  316 (410)
Q Consensus       257 ~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~  316 (410)
                      ++ +|.|+ |++++   ++++++++.......                   ......+++..++.++...++...     
T Consensus       229 l~-~g~~~~g~l~~---~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-----  299 (416)
T 1qz9_A          229 LN-GGPGSQAFVWV---SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFA-----  299 (416)
T ss_dssp             TC-CCTTCCCEEEE---CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHT-----
T ss_pred             CC-CCCCCeEEEEE---CHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHH-----
Confidence            75 57887 99855   666544432210000                   001112334433333322322100     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcc----CCCCCcccccCC----cceeeecCC-CH-HHHHHhhhcCcEEEcCC--C-
Q 015283          317 KAEMEMMAGRIKNVRQKLFDSLSAKD----KSGKDWSFILRQ----IGMFSFTGL-NK-AQSDNMTNKWHVYMTKD--G-  383 (410)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~~l~~~~----g~~~~~~~~~~~----~~~~~~~~~-~~-~~~~~ll~~~gi~v~~~--g-  383 (410)
                      .+.+++.+++++++++++.+.|+ ++    +    +.+..+.    .+.++|+.+ +. ++.+.+. ++||.+...  + 
T Consensus       300 ~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~~~~~~  373 (416)
T 1qz9_A          300 QTDMASLRRKSLALTDLFIELVE-QRCAAHE----LTLVTPREHAKRGSHVSFEHPEGYAVIQALI-DRGVIGDYREPRI  373 (416)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHH-HHHTTSC----CEECSCSSGGGBCSEEEEECTTHHHHHHHHH-TTTEECEEETTTE
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHH-hhccCCC----eEEeCCCCHHHcCCEEEEecCCHHHHHHHHH-hCCcEeccCCCCe
Confidence            01235777888889999999888 75    4    3444442    244566554 23 3455555 469988643  2 


Q ss_pred             -eEEec--CCCcccHHHHHHHHHHHhhh
Q 015283          384 -RISLA--GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       384 -Ris~~--~~~~~~i~~~~~~l~~~l~~  408 (410)
                       ||+++  ..+++++++++++|++++++
T Consensus       374 lRis~~~~~~t~~~i~~~~~~l~~~~~~  401 (416)
T 1qz9_A          374 MRFGFTPLYTTFTEVWDAVQILGEILDR  401 (416)
T ss_dssp             EEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence             99986  45899999999999998865

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.94  E-value=3.2e-25  Score=213.83  Aligned_cols=326  Identities=14%  Similarity=0.008  Sum_probs=200.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|..-...|+  .+|.+.+++.+.+.......| +.....++++.+++++.       ..+++++  ++||++
T Consensus        52 ~~~iD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~-------~~~~v~~--~~~g~e  119 (424)
T 2e7u_A           52 NRYLDYVMSWGPLILGH--AHPKVLARVRETLERGLTFGA-PSPLEVALAKKVKRAYP-------FVDLVRF--VNSGTE  119 (424)
T ss_dssp             CEEEESSGGGTTCTTCB--TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHCT-------TCCEEEE--ESSHHH
T ss_pred             CEEEEccccccccccCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCCHHH
Confidence            45789988864223354  368999999888765321233 23334566666666632       2678999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hC-------------CC------CccceeeecCCCcccChhhHHHH
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA-------------RV------PWSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~-------------g~------~~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                      ++..+.++.+.+.+++.|++.+|+|.++..... ..             |.      ++..++.       .|++.+++.
T Consensus       120 a~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  192 (424)
T 2e7u_A          120 ATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV  192 (424)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence            999986654445667899999999988654322 11             21      1122221       378999988


Q ss_pred             HhcCCCCcEEEEeCCCCCC-CCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          174 IKAAPGGSFILLHGCAHNP-TGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NP-tG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                      +++.++++++++ ++|+|+ ||.+. +.+.+++|.++ ++||+++|+||+|.+|..+    ....... .+...++   .
T Consensus       193 l~~~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g----~~~~~~~-~~~~~di---~  262 (424)
T 2e7u_A          193 LKRRGEEIAAII-FEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLA----FGGATEL-LGLKPDL---V  262 (424)
T ss_dssp             HHHHGGGEEEEE-ECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSS----TTHHHHH-HTCCCSE---E
T ss_pred             HHhCCCCEEEEE-EeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccc----hhHHHHH-hCCCcch---h
Confidence            874222455555 456554 89765 78889999999 9999999999999987422    1122211 2222343   3


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                      |+||.++ +|+|+||+++   ++++++.+......... .+.+.+.+++.++...|+..      .+ .++..+++++++
T Consensus       263 s~sK~l~-~G~~~G~~~~---~~~~~~~~~~~~~~~~~-~t~~~~~~~~aaa~aal~~~------~~-~~~~~~~~~~~~  330 (424)
T 2e7u_A          263 TLGKILG-GGLPAAAYAG---RREIMEKVAPLGPVYQA-GTLSGNPLAMAAGLATLELL------EE-NPGYYAYLEDLG  330 (424)
T ss_dssp             EECGGGG-TTSSCEEEEE---CHHHHTTBTTTSSBCCC-CTTCSCHHHHHHHHHHHHHH------HH-CTHHHHHHHHHH
T ss_pred             hhhhhhh-CCcceEEEEE---cHHHHhhhcccCCcccC-CCCCCCHHHHHHHHHHHHHH------Hh-ccHHHHHHHHHH
Confidence            9999999 5999999855   67744443220000111 12244555655555444311      11 124556666667


Q ss_pred             HHHHHHhhhcc----CCCCCcccccCCcceeeecCCC------------------HHHHHHhhhcCcEEEcCCC--eEEe
Q 015283          332 QKLFDSLSAKD----KSGKDWSFILRQIGMFSFTGLN------------------KAQSDNMTNKWHVYMTKDG--RISL  387 (410)
Q Consensus       332 ~~l~~~l~~~~----g~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ll~~~gi~v~~~g--Ris~  387 (410)
                      +++.+.|+ ++    +.   .....+ .|.|.|+.+.                  .++...++ ++||.+.|++  |+.+
T Consensus       331 ~~l~~~L~-~~~~~~~~---~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~  404 (424)
T 2e7u_A          331 ARLEAGLK-EVLKEKGL---PHTVNR-VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNFEAAFL  404 (424)
T ss_dssp             HHHHHHHH-HHHHHTTC---CCEEEE-ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSSSCEEC
T ss_pred             HHHHHHHH-HHHHhCCC---ceEEEe-eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCCCceEe
Confidence            77777666 54    42   112233 4556665442                  12455665 4799999986  4433


Q ss_pred             c-CCCcccHHHHHHHHHHHh
Q 015283          388 A-GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       388 ~-~~~~~~i~~~~~~l~~~l  406 (410)
                      + ..+++++++++++|++++
T Consensus       405 ~~~~t~~~i~~~l~~l~~~l  424 (424)
T 2e7u_A          405 SVAHREEDVEKTLEALRKAL  424 (424)
T ss_dssp             CTTCCHHHHHHHHHHHHHHC
T ss_pred             eccCCHHHHHHHHHHHHHhC
Confidence            2 249999999999998864

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.94  E-value=5.1e-25  Score=213.96  Aligned_cols=343  Identities=12%  Similarity=0.069  Sum_probs=208.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc---cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...+|+..|..-...|+.  +|.+.+++.+.+......   .| +.....++++.+++++    +  ..+++|++  ++|
T Consensus        50 ~~~lD~~~~~~~~~lG~~--~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~--~~g  118 (449)
T 3a8u_X           50 RKVYDSLSGLWTCGAGHT--RKEIQEAVAKQLSTLDYSPGFQY-GHPLSFQLAEKITDLT----P--GNLNHVFF--TDS  118 (449)
T ss_dssp             CEEEETTHHHHTCTTCBS--CHHHHHHHHHHTTTCSCCCSSSC-CCHHHHHHHHHHHTTS----S--TTEEEEEE--ESS
T ss_pred             CEEEECCccHhhccCCCC--CHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhC----C--CCCCEEEE--cCc
Confidence            346788766632233443  689999998887542111   22 2222345555555543    2  13678999  999


Q ss_pred             hhhHHHHHHHHHHHhC------CCCEEEEcCCCCcchhh-hhhhCCC------------Cccceeeec--CCC-cccC--
Q 015283          111 GTGSLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYD--PKT-VGLD--  166 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~--~~~-~~~d--  166 (410)
                      |+++++++.+++..+.      +||+|++.+|+|.++.. .+...|.            .+..++...  ..+ .++|  
T Consensus       119 gsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~  198 (449)
T 3a8u_X          119 GSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPK  198 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCS
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChH
Confidence            9999999866554322      67999999999987643 3433331            223333211  011 1245  


Q ss_pred             ------hhhHHHHHhcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          167 ------FEGMIADIKAAP-GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       167 ------~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                            ++.+++.+++.+ ++++++++++.+|+||. +.+.+.+++|.++|++||+++|+||+|.+|+..+   ..+.+.
T Consensus       199 ~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g---~~~~~~  275 (449)
T 3a8u_X          199 EGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTG---SMFGAD  275 (449)
T ss_dssp             SSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccC---cchhhh
Confidence                  889998887422 24566665444678997 5678889999999999999999999998886431   112222


Q ss_pred             HHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH-----hhccCcccCCChhHHHHHHHHhCChhh
Q 015283          239 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK-----RLARPMYSNPPVHGARIVANVVGNPAL  312 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~a~~~l~~~~~  312 (410)
                      . .....+++   |+||.++ +| +|+||+++   ++++++.+.....     ......+.+.+.+++.++...|+..  
T Consensus       276 ~-~~~~~di~---s~sK~l~-~G~~~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~--  345 (449)
T 3a8u_X          276 S-FGVTPDLM---CIAKQVT-NGAIPMGAVIA---STEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLL--  345 (449)
T ss_dssp             H-HTCCCSEE---EECGGGG-TTSSCCEEEEE---EHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHH--
T ss_pred             h-cCCCCCEE---EEccccc-CCCCceEEEEE---CHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHH--
Confidence            2 22223433   8999998 57 99999854   5675554432100     0011122344556655555444321  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----H-----HHHHHhhhcCcEEEcCC
Q 015283          313 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----K-----AQSDNMTNKWHVYMTKD  382 (410)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~ll~~~gi~v~~~  382 (410)
                          .+  +...++++++++++.+.|+ +++.-..+... +..|.|+|+.+.     .     ++...+++ +||.+.++
T Consensus       346 ----~~--~~~~~~~~~~~~~l~~~L~-~l~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~  416 (449)
T 3a8u_X          346 ----QK--ENLVQSVAEVAPHFEKALH-GIKGAKNVIDI-RNFGLAGAIQIAPRDGDAIVRPFEAGMALWK-AGFYVRFG  416 (449)
T ss_dssp             ----HH--TTHHHHHHHHHHHHHHHHH-TTTTSTTEEEE-EEETTEEEEEECCBTTBSSHHHHHHHHHHHH-HTEECEEE
T ss_pred             ----Hh--cCHHHHHHHHHHHHHHHHH-HHhcCCCeEEE-eeeEEEEEEEEecCcccccccHHHHHHHHHH-CCcEEecC
Confidence                11  2355677778888888887 65310101112 334566665431     1     45666765 59999986


Q ss_pred             C---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          383 G---RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 g---Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |   ||+++ ..+++++++++++|+++++++
T Consensus       417 g~~iRis~~~~~t~~~i~~~l~~l~~~l~~~  447 (449)
T 3a8u_X          417 GDTLQFGPTFNSKPQDLDRLFDAVGEVLNKL  447 (449)
T ss_dssp             TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence            5   88854 349999999999999998764

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.94  E-value=9.1e-26  Score=219.15  Aligned_cols=339  Identities=12%  Similarity=0.017  Sum_probs=195.8

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...+|+..|.+....|+.  +|.+.+++.+++...  .+|....+..+.++++++++....+.. ..+++++  ++||++
T Consensus        61 ~~ylD~~~~~~~~~lGh~--~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~--~~sGse  133 (451)
T 3oks_A           61 NRLIDLGSGIAVTTVGNS--APKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSAL--FNSGSE  133 (451)
T ss_dssp             CEEEESSHHHHTCTTCTT--CHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEE--ESSHHH
T ss_pred             CEEEEcCCCccccccCCC--CHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEE--eCcHHH
Confidence            356788877553344543  689999998887553  223333344444555555543332211 1468999  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCC--------------CCccceeeec--------CCCc---ccChh
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR--------------VPWSEYRYYD--------PKTV---GLDFE  168 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g--------------~~~~~v~~~~--------~~~~---~~d~~  168 (410)
                      |++.+.++.....+++.|++.+++|.++.......+              ..+..++...        .+..   ..+++
T Consensus       134 A~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  213 (451)
T 3oks_A          134 AVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAK  213 (451)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHH
Confidence            999997665444456899999999987654433221              1233344320        0000   01344


Q ss_pred             hHHHHHhc--CCCCcEEEEeCCCCCCCC-C-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283          169 GMIADIKA--APGGSFILLHGCAHNPTG-I-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG  244 (410)
Q Consensus       169 ~l~~~i~~--~~~~~~~ii~~~p~NPtG-~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  244 (410)
                      .+++.+.+  .++.+.+++ +.|.|++| . ..+.+.+++|.++|++||+++|+||+|.+|+..+   ..+.... .+..
T Consensus       214 ~~~~~l~~~~~~~~~aavi-~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~-~~~~  288 (451)
T 3oks_A          214 RAITVIDKQIGADNLAAVV-IEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTG---AMFACEH-EGID  288 (451)
T ss_dssp             HHHHHHHHHTCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGG-GTCC
T ss_pred             HHHHHHHhhcCCCCEEEEE-EcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccc---cchhhhh-cCCC
Confidence            44455542  112344444 56666655 3 3366669999999999999999999999886432   1222211 1222


Q ss_pred             CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283          245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA  324 (410)
Q Consensus       245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~  324 (410)
                      .+++   ||||.++. |+|+||+++   ++++++.    +.......+.+.+.+++.++...|+..+      +  +...
T Consensus       289 pdi~---t~sK~l~~-G~~iG~v~~---~~~~~~~----~~~~~~~~t~~~~~~~~aaa~aal~~~~------~--~~~~  349 (451)
T 3oks_A          289 PDLI---VTAKGIAG-GLPLSAVTG---RAEIMDS----PHVSGLGGTYGGNPIACAAALATIETIE------S--EGLV  349 (451)
T ss_dssp             CSEE---EECGGGGT-TSSCEEEEE---EHHHHTC----SCTTSBCCSSSSCHHHHHHHHHHHHHHH------H--TTHH
T ss_pred             CCee---eehhhhhC-CcceEEEEE---CHHHHhh----hcCCCcCCCCCCCHHHHHHHHHHHHHHh------h--hhHH
Confidence            2333   89999985 999999754   6774443    3322223334566667766655554210      0  1223


Q ss_pred             HHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceeeecCC--------C----HHHHHHhhhcCcEEEcCCC------
Q 015283          325 GRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL--------N----KAQSDNMTNKWHVYMTKDG------  383 (410)
Q Consensus       325 ~~~~~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~ll~~~gi~v~~~g------  383 (410)
                      ++++++.+++.+.|.+   ..+.   +....+ .|.|.++.+        +    ..+...+++ +||.+.|++      
T Consensus       350 ~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~i  424 (451)
T 3oks_A          350 ARAQQIEKIMKDRLGRLQAEDDR---IGDVRG-RGAMIAMELVKAGTTEPDADLTKALCAGAHA-AGVIVLSCGTYGNVV  424 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTT---EEEEEE-ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHH-TTEECEEECTTSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCC---eEEEEE-eeEEEEEEEecCccCCCCHHHHHHHHHHHHh-CCcEEecCCCCCCEE
Confidence            3344444444444430   3331   222233 344554432        1    233555655 699998864      


Q ss_pred             eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          384 RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       384 Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      ||+++. .+++++++++++|++++++
T Consensus       425 Ri~~~~~~t~e~i~~~l~~l~~~l~~  450 (451)
T 3oks_A          425 RFLPPLSIGDDLLNEGLDVLEEVLRG  450 (451)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHhh
Confidence            777553 3899999999999999864

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.93  E-value=4.1e-25  Score=208.22  Aligned_cols=308  Identities=11%  Similarity=0.034  Sum_probs=196.4

Q ss_pred             ccccHHHHHHHHHhhccCC--CccCcCC--cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283           51 PYVLDVVKKAENLMLERGE--NKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~--~~~y~~~--~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      ..+++.+.+++.+.+....  ...+.+.  .-..++++.+++++    +.. +++++++  ++||++++.++.  .....
T Consensus        13 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~v~~--~~g~t~al~~~~--~~l~~   83 (362)
T 3ffr_A           13 SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLL----ELP-SNYEVLF--LASATEIWERII--QNCVE   83 (362)
T ss_dssp             CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTEEEEE--ESCHHHHHHHHH--HHHCS
T ss_pred             cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEE--eCCchHHHHHHH--HhccC
Confidence            3457888877776654432  1111111  12345555555554    322 2567888  999999999983  33355


Q ss_pred             CCCEEEEcCCCCcc-hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283          127 PGAKVLISSPTWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI  205 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i  205 (410)
                      + +.+++..+.|.. +...++..|++++.++.  +.++.+|+++++  +.   ++++++++++|+||||.+++   +++|
T Consensus        84 ~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~--~~---~~~~~v~~~~~~nptG~~~~---l~~i  152 (362)
T 3ffr_A           84 K-KSFHCVNGSFSKRFYEFAGELGREAYKEEA--AFGKGFYPADIT--VP---ADAEIICLTHNETSSGVSMP---VEDI  152 (362)
T ss_dssp             S-EEEEEECSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCGGGCC--CC---TTCCEEEEESEETTTTEECC---HHHH
T ss_pred             C-cEEEEcCcHHHHHHHHHHHHhCCCeEEEec--CCCCCCCHHHHh--cc---CCccEEEEEcCCCCcceeCC---HHHH
Confidence            6 555566666662 34466778999999987  455788999998  33   46778888999999999887   5667


Q ss_pred             HHHHHHc-CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHH
Q 015283          206 ADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQ  283 (410)
Q Consensus       206 ~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~  283 (410)
                      .++|++| |+++|+|++|..+... .+     +    .  ..++++.|+||.++ ++|+  |++++   ++++++++...
T Consensus       153 ~~la~~~p~~~li~D~a~~~~~~~-~~-----~----~--~~d~~~~s~~K~~~~~~G~--g~~~~---~~~~~~~~~~~  215 (362)
T 3ffr_A          153 NTFRDKNKDALIFVDAVSSLPYPK-FD-----W----T--KIDSVFFSVQKCFGLPAGL--GVWIL---NDRVIEKSKAL  215 (362)
T ss_dssp             TTSGGGSTTSEEEEECTTTTTSSC-CC-----T----T--SCSEEEEETTSTTCCCSCC--EEEEE---EHHHHHHHHHH
T ss_pred             HHHHHhCCCCEEEEecccccCCcc-cC-----h----h--HCcEEEEecccccCCCCce--EEEEE---CHHHHHHhhhc
Confidence            7779999 9999999997654421 11     0    0  14588899999998 7774  66644   67766666543


Q ss_pred             HH----------------hhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCC
Q 015283          284 LK----------------RLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSG  345 (410)
Q Consensus       284 ~~----------------~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~  345 (410)
                      ..                ...... ..+++..++.++...++.  +.   .+.+++.+++++++++++.+.|+ ++ |  
T Consensus       216 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~--~~---~~~~~~~~~~~~~~~~~l~~~L~-~~~g--  287 (362)
T 3ffr_A          216 LAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGD--ML---QISADGIRKQTEEKAALINTYIE-SSKV--  287 (362)
T ss_dssp             HHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH--HH---HHCHHHHHHHHHHHHHHHHHHHH-HCSS--
T ss_pred             cccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHH--HH---HccHHHHHHHHHHHHHHHHHHHH-HccC--
Confidence            22                000111 223444444443333321  00   11246788888999999999998 77 4  


Q ss_pred             CCcccccC----CcceeeecCC--CH-HHHHHhhhcCcEEEcCC------C--eEEecC-CCcccHHHHHHHHHHHh
Q 015283          346 KDWSFILR----QIGMFSFTGL--NK-AQSDNMTNKWHVYMTKD------G--RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       346 ~~~~~~~~----~~~~~~~~~~--~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                        +....+    ..+.++|+.+  +. ++.+.|.+ .||.+.+|      +  ||++.. .+++++++++++|++++
T Consensus       288 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          288 --FSFGVEDAKLRSMTTIVANTTMLPGEINKILEP-FDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             --EEESSSCGGGBCSSEEEEEESSCHHHHHHHHGG-GTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred             --ceeccCChhhcCCceEEEecCCCHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence              343331    2233344322  44 44566665 49999875      2  999764 48899999999999875

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.93  E-value=4.4e-25  Score=217.20  Aligned_cols=322  Identities=13%  Similarity=0.121  Sum_probs=214.7

Q ss_pred             HHHHHHHHHhhccC---CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh---CCC
Q 015283           55 DVVKKAENLMLERG---ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---FPG  128 (410)
Q Consensus        55 ~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~---~~g  128 (410)
                      +.+.+++.+.+...   ....|....|..++++.+++++.+.+|.+.+++++++  ++||++++.++...+...   .+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~--~~ggt~a~~~a~~a~~~~~~~~~g  155 (497)
T 3mc6_A           78 DDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTT--TSGGTESLLLACLSAKMYALHHRG  155 (497)
T ss_dssp             HHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEE--ESSHHHHHHHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEE--cCcHHHHHHHHHHHHHHHHHhcCC
Confidence            55666555554321   1134555667888999988888777776655678988  999999999985544321   145


Q ss_pred             ---CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283          129 ---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI  205 (410)
Q Consensus       129 ---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i  205 (410)
                         |.|+++.|+|..+...+...|.+++.+++.+ +++.+|++.+++.+++   +++++++++|+||||.+.+   +++|
T Consensus       156 ~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~---l~~i  228 (497)
T 3mc6_A          156 ITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINK---NTVLLVGSAPNFPHGIADD---IEGL  228 (497)
T ss_dssp             CSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCS---SEEEEEEETTCTTTCCCCS---CTTT
T ss_pred             CCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhh---CCEEEEEECCCCCCCcCCC---HHHH
Confidence               8999999999999999999999999999842 4678999999999875   6788889999999999766   5577


Q ss_pred             HHHHHHcCCcccccccCCCCCCC-----CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283          206 ADVIQEKNHIPFFDVAYQGFASG-----SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       206 ~~~~~~~~~~li~Deay~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      .++|++||+++|+|++|.++...     +.. ....+.  ....+.++++.|++|.++ +|.++||+  +++++. ... 
T Consensus       229 ~~la~~~g~~livD~a~~~~~~~f~~~~~~~-~~~~~~--~~~~g~d~~~~s~~K~l~-~~~~~g~~--~~~~~~-~~~-  300 (497)
T 3mc6_A          229 GKIAQKYKLPLHVDSCLGSFIVSFMEKAGYK-NLPLLD--FRVPGVTSISCDTHKYGF-APKGSSVI--MYRNSD-LRM-  300 (497)
T ss_dssp             TTHHHHTTCCEEEETTTTHHHHGGGTTTTCC-SCCCCS--TTSTTCCEEEEETTTTTC-CCSSCEEE--ECSSHH-HHT-
T ss_pred             HHHHHHhCCEEEEECcchhhhhhhhhhhccc-CCcccc--ccCCCCcEEEECchhhcC-CCCCceeE--EecCHH-HHh-
Confidence            77799999999999998754210     000 000000  112234678889999864 67888997  344433 211 


Q ss_pred             HHHHHhhccCccc-----CCC---------hhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCC
Q 015283          281 KSQLKRLARPMYS-----NPP---------VHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSG  345 (410)
Q Consensus       281 ~~~~~~~~~~~~~-----~~~---------~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~  345 (410)
                         ........+.     .+.         ..++.++...+.+        +.+++..++..++++++.+.|+ +. +. 
T Consensus       301 ---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~--------~~~~~~~~~~~~~~~~l~~~L~-~~~~g-  367 (497)
T 3mc6_A          301 ---HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGE--------NGYIESCQEIVGAAMKFKKYIQ-ENIPD-  367 (497)
T ss_dssp             ---TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH-HSCTT-
T ss_pred             ---hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHH-hcCCC-
Confidence               1111111111     000         2223333333322        2345777788888899999998 73 21 


Q ss_pred             CCcccc-cCCcceeeec--CCCHHH-HHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          346 KDWSFI-LRQIGMFSFT--GLNKAQ-SDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~~~~-~~~~~~~~~~--~~~~~~-~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                        +.+. ++..+++.|.  +.+... .+.|.+ +||.+.+++     |+++...+++++++++++|+++++++
T Consensus       368 --~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~  437 (497)
T 3mc6_A          368 --LDIMGNPRYSVISFSSKTLNIHELSDRLSK-KGWHFNALQKPVALHMAFTRLSAHVVDEICDILRTTVQEL  437 (497)
T ss_dssp             --CEECSCCCSSEEEEECTTTTHHHHHHHHHT-TTCBCEECCSSCCEEEECCTTTTCTHHHHHHHHHHHHHHH
T ss_pred             --EEEecCCCeeEEEEeCCCCCHHHHHHHHHh-CCEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence              3443 3555555553  334444 555554 699886543     89887669999999999999998653

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.93  E-value=3.1e-25  Score=216.17  Aligned_cols=340  Identities=11%  Similarity=0.011  Sum_probs=206.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCc----ccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE----GLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~----g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      ...||+..|......|+.  +|.+.+++.+++.... ..|....    ...++++.+++++.      ...+++++  ++
T Consensus        55 ~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~lae~l~~~~~------~~~~~v~~--~~  123 (472)
T 3hmu_A           55 EEILDAMAGLWCVNIGYG--RDELAEVAARQMRELP-YYNTFFKTTHVPAIALAQKLAELAP------GDLNHVFF--AG  123 (472)
T ss_dssp             CEEECTTHHHHTCTTCBC--CHHHHHHHHHHHHHCS-CCCSSSSEECHHHHHHHHHHHHHSC------TTEEEEEE--ES
T ss_pred             CEEEECCCchhhccCCCC--CHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCC------CCCCEEEE--eC
Confidence            467888888543355654  6899999888875422 2232222    33455555555531      12568999  99


Q ss_pred             ChhhHHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCCCC------------ccceeeec--C-CCcccC--
Q 015283          110 SGTGSLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARVP------------WSEYRYYD--P-KTVGLD--  166 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~------------~~~v~~~~--~-~~~~~d--  166 (410)
                      ||++|++.+++++..+      .++++|++.+|+|.++.......+..            +..++...  . +.+ .|  
T Consensus       124 sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~  202 (472)
T 3hmu_A          124 GGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPE  202 (472)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHH
Confidence            9999999997777554      24689999999998876544433321            22333210  0 111 22  


Q ss_pred             ------hhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          167 ------FEGMIADIKAAP-GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       167 ------~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                            ++.+++.+.+.. +++++|++.+++|++|.+. +.+.+++|.++|++||+++|+||+|.+|+..+   ..+...
T Consensus       203 ~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G---~~~a~~  279 (472)
T 3hmu_A          203 EFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTG---NWFGTQ  279 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSCHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccC---ccchhH
Confidence                  678888876422 3567777677788888765 77889999999999999999999999987432   222222


Q ss_pred             HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283          239 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA  318 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~  318 (410)
                      . .+..++++   +|||.++.+|+|+||+++   ++++++.+..  .......+.+.+.+++.++...|+..+      +
T Consensus       280 ~-~~v~pdi~---t~sK~l~gg~~plG~v~~---~~~i~~~~~~--~~~~~~~t~~~np~a~aAa~aaL~~~~------~  344 (472)
T 3hmu_A          280 T-MGIRPHIM---TIAKGLSSGYAPIGGSIV---CDEVAHVIGK--DEFNHGYTYSGHPVAAAVALENLRILE------E  344 (472)
T ss_dssp             H-HTCCCSEE---EECGGGTTTSSCCEEEEE---EHHHHHHHTT--SCBCCCCTTTTCHHHHHHHHHHHHHHH------H
T ss_pred             H-hCCCCcee---eechhhhcCCcceEEEEE---CHHHHHhccc--CCccccCCCCCCHHHHHHHHHHHHHHH------H
Confidence            2 22333444   689999865599999855   7775555411  111112233455666666655544110      0


Q ss_pred             HHHHHHHHHH-HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C--------------H-HHHHHhhhcCcEEEc
Q 015283          319 EMEMMAGRIK-NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N--------------K-AQSDNMTNKWHVYMT  380 (410)
Q Consensus       319 ~~~~~~~~~~-~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~--------------~-~~~~~ll~~~gi~v~  380 (410)
                        +...++++ ++.+++.+.|+ ++.....+....+.+. |.++.+  +              . .+...+++ +||.+.
T Consensus       345 --~~~~~~~~~~~~~~l~~~L~-~l~~~~~v~~vr~~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~  419 (472)
T 3hmu_A          345 --ENILDHVRNVAAPYLKEKWE-ALTDHPLVGEAKIVGM-MASIALTPNKASRAKFASEPGTIGYICRERCFA-NNLIMR  419 (472)
T ss_dssp             --TTHHHHHHHTHHHHHHHHHH-GGGGSTTEEEEEEETT-EEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHH-TTBCCE
T ss_pred             --hHHHHHHHHHHHHHHHHHHH-HHhcCCCeEEEEecCc-eEEEEEecCccccccccchhHHHHHHHHHHHHH-CCcEEE
Confidence              23344555 56666666665 5421011223334433 333221  1              2 33556665 699999


Q ss_pred             CCC---eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283          381 KDG---RISLA-GLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       381 ~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~  408 (410)
                      |+|   ||+.+ ..+++++++++++|++++++
T Consensus       420 ~~g~~iRi~p~~~~t~e~i~~~l~~l~~~l~~  451 (472)
T 3hmu_A          420 HVGDRMIISPPLVITPAEIDEMFVRIRKSLDE  451 (472)
T ss_dssp             EETTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             ecCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            876   88743 24999999999999998865

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.93  E-value=6.9e-25  Score=216.58  Aligned_cols=319  Identities=12%  Similarity=0.037  Sum_probs=210.5

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCce--EEEecCChhhHHHHHHHHHHHhCCC---
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPG---  128 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i--~~~~t~ggt~a~~~~~~~~~~~~~g---  128 (410)
                      .+.+.+++........ ..|....+..++++++++++.+.+|.+.+++++  ++  ++||++++..+.+.+  ..+|   
T Consensus       113 ~~~~~~~~~~~~~~~~-~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~--t~ggt~a~~~al~a~--~~~g~~~  187 (514)
T 3mad_A          113 IAFLNEVYALQSQSNP-LHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTV--TSGGTESLLLAMKTY--RDWARAT  187 (514)
T ss_dssp             HHHHHHHHHHHTTCCT-TCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEE--ESSHHHHHHHHHHHH--HHHHHHH
T ss_pred             HHHHHHHHHHHhhcCC-cccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEE--cCcHHHHHHHHHHHH--HHHhhhh
Confidence            3455555555443332 344445567788888888877777765555777  77  999999999985544  3343   


Q ss_pred             -----CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283          129 -----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE  203 (410)
Q Consensus       129 -----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~  203 (410)
                           |+|+++.|+|..+...++..|.+++.+++.  .++.+|++.+++.+++   +++++++++|+||||.+.+   ++
T Consensus       188 ~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~---~~~~v~~~~~~nptG~~~~---l~  259 (514)
T 3mad_A          188 KGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD--ADYRADVAAMREAITP---NTVVVAGSAPGYPHGVVDP---IP  259 (514)
T ss_dssp             HCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC--TTSCBCHHHHHHHCCT---TEEEEEEETTCTTTCCCCC---HH
T ss_pred             cCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC--CCCCCCHHHHHHHhcc---CCEEEEEeCCCCCCccccC---HH
Confidence                 999999999999999999999999999983  3678999999999975   6788888999999999876   67


Q ss_pred             HHHHHHHHcCCcccccccCCCCCCC---CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283          204 KIADVIQEKNHIPFFDVAYQGFASG---SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       204 ~i~~~~~~~~~~li~Deay~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      +|.++|++||+++|+|++|.++...   ........+.  ....+.++++.|++|.++ +|.++|+++  ++++.    +
T Consensus       260 ~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~--~~~~g~d~~~~s~~K~l~-~~~~~g~~~--~~~~~----~  330 (514)
T 3mad_A          260 EIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD--FRLEGVTSVSADTHKYGY-GAKGTSVIL--YRRPD----L  330 (514)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS--TTSTTCCEEEECTTTTTC-CCSSCEEEE--ESSHH----H
T ss_pred             HHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc--ccCCCCcEEEECchhccC-CCCCeEEEE--EeCHH----H
Confidence            7888899999999999999887531   0000000000  112235788899999864 678899984  44433    1


Q ss_pred             HHHHHhhcc----------Cc-ccCCChh---HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283          281 KSQLKRLAR----------PM-YSNPPVH---GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK  346 (410)
Q Consensus       281 ~~~~~~~~~----------~~-~~~~~~~---~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~  346 (410)
                      .. ......          .. ....+..   ++.++...+.        .+.+++..++..++++++.+.|+ +++.  
T Consensus       331 ~~-~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~--------~~~~~~~~~~~~~~~~~l~~~L~-~~~g--  398 (514)
T 3mad_A          331 LH-YQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLG--------EEGYLDATRRILQAADRLKAGVR-AIPS--  398 (514)
T ss_dssp             HT-TTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-TSTT--
T ss_pred             hc-cccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHh-hCCC--
Confidence            11 110000          00 1112221   2222222222        22346778888889999999998 7631  


Q ss_pred             CcccccCCcceeeec--CCCHH-HHHHhhhcCcEEEcCC---C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          347 DWSFILRQIGMFSFT--GLNKA-QSDNMTNKWHVYMTKD---G--RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       347 ~~~~~~~~~~~~~~~--~~~~~-~~~~ll~~~gi~v~~~---g--Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                       +.+..+..+++.+.  +.+.. +.+.+.+ +||.+...   +  |+++..  .+++++++++++|++++++
T Consensus       399 -~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~  468 (514)
T 3mad_A          399 -LKILGDPLWVIAVASDELNIYQVMEEMAG-RGWRLNGLHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ  468 (514)
T ss_dssp             -CEESSCCSSEEEEECSSSCHHHHHHHHHT-TTCBCEEETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred             -eEEeCCCeEEEEEeCCCCCHHHHHHHHHh-cCCEeccCCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence             45454444433332  23444 4556655 59887321   1  888763  2568999999999998865

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.93  E-value=5.5e-25  Score=208.48  Aligned_cols=317  Identities=12%  Similarity=0.055  Sum_probs=206.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .+++|++.|.+      + ..+ +.+++.+.+...   .|.+..+..++++++++++..        +++++  ++||++
T Consensus         6 ~~~~~l~~~~~------~-~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~   64 (374)
T 3uwc_A            6 VPYSYLERQFA------D-IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHNA--------PHAIG--VGTGTD   64 (374)
T ss_dssp             BCSCCHHHHTS------S-CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTTC--------SEEEE--ESCHHH
T ss_pred             ceeeccccCCC------C-chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhCC--------CcEEE--eCCHHH
Confidence            35678887765      2 245 888887776543   476788999999999999632        25667  899999


Q ss_pred             HHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++..+  +... +.+||+|+++.|+|..+...++..|.+++.+++.  +++.+|++.+++.+++   ++++++   |+||
T Consensus        65 a~~~~--~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~---~~~~v~---~~n~  134 (374)
T 3uwc_A           65 ALAMS--FKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITD---KTKAIM---PVHY  134 (374)
T ss_dssp             HHHHH--HHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCT---TEEEEC---CBCG
T ss_pred             HHHHH--HHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCC---CceEEE---EeCC
Confidence            99887  3344 5699999999999999999999999999999884  6678899999988865   566666   8899


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEE
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVV  270 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~  270 (410)
                      ||.+.+   +++|.++|+++|+++|+|++|..+...  +....     . . ..++++.|+|  |.++.+|. .|++  +
T Consensus       135 ~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~--~~~~~-----~-~-~~d~~~~s~~~~K~l~~~g~-~g~~--~  199 (374)
T 3uwc_A          135 TGNIAD---MPALAKIAKKHNLHIVEDACQTILGRI--NDKFV-----G-S-WGQFACFSLHPLKNLNVWSD-AGVI--I  199 (374)
T ss_dssp             GGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEE--TTEET-----T-S-SSSEEEEECSSSSSSCCSSC-CEEE--E
T ss_pred             cCCcCC---HHHHHHHHHHcCCEEEEeCCCccCcee--CCeec-----c-c-cccEEEEeCCCCCcCCccce-eEEE--E
Confidence            999654   677888899999999999998765421  11111     0 1 1256777866  99986565 6776  4


Q ss_pred             eCCchhHHHHHHHHHhhcc--------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          271 CSSSDLAARVKSQLKRLAR--------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      ++++++.+++.........        ........+.+.++...+.          .+++..++.+++.+++.+.|+ ++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~----------~~~~~~~~~~~~~~~l~~~l~-~~  268 (374)
T 3uwc_A          200 THSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMN----------QLETITEKRRGIAHLYDQSFV-DL  268 (374)
T ss_dssp             ESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGG----------GHHHHHHHHHHHHHHHHHHTG-GG
T ss_pred             eCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhc-cC
Confidence            5566655554432211000        0001122222222221111          124566677778888888888 76


Q ss_pred             CCCCCcccc-cCCcceeee----c-CCCHHHHHHhhhcCcEEEcCC-----------------------------C--eE
Q 015283          343 KSGKDWSFI-LRQIGMFSF----T-GLNKAQSDNMTNKWHVYMTKD-----------------------------G--RI  385 (410)
Q Consensus       343 g~~~~~~~~-~~~~~~~~~----~-~~~~~~~~~ll~~~gi~v~~~-----------------------------g--Ri  385 (410)
                      +.  .+... .+..+...|    + ..+.+.+.+.+.++||.+.++                             +  |+
T Consensus       269 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl  346 (374)
T 3uwc_A          269 SE--FIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITL  346 (374)
T ss_dssp             TT--TEECCCCCTTEECCCSSEEEEETTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEE
T ss_pred             CC--eEEeccCCCCCceeeEEEEEEcCCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEc
Confidence            51  01111 122122221    1 124444444444569988664                             1  56


Q ss_pred             EecC-CCcccHHHHHHHHHHHhhhc
Q 015283          386 SLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       386 s~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++.. +|++|++++++.|++++++.
T Consensus       347 ~~~~~~t~edi~~~~~~l~~~l~~~  371 (374)
T 3uwc_A          347 PAHPYLTEEEINYIIKKVREFYLEK  371 (374)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHhh
Confidence            5443 58999999999999998753

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.93  E-value=7.8e-25  Score=213.74  Aligned_cols=360  Identities=11%  Similarity=0.030  Sum_probs=215.0

Q ss_pred             cCCCCCCCCCcccchhHhhh--cCCCCeeeeeeee-eecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283           11 EGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGA-YRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~-~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia   87 (410)
                      .+++.+.|.++..+..+...  .....++++..|. ++|.....++ +.+.+++.+.+..+. ..|.+..+..+++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la   84 (467)
T 2oqx_A            7 FRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVK   84 (467)
T ss_dssp             SCCCCCCCCCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHH
T ss_pred             hheeeecccccccHHHHHHHHHHcCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCc-ceeccCchhHHHHHHHH
Confidence            35666777766655543332  2334567888774 3444333332 777777777765443 56877788899999999


Q ss_pred             HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCC-----C----CEEEEcCCCCcchhhhhhhCCCCccce---
Q 015283           88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP-----G----AKVLISSPTWGNHKNIFNDARVPWSEY---  155 (410)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~-----g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v---  155 (410)
                      +++..        +++++  |+||++|+.++...+  ..+     |    |+|++..+.|..+.......|..+...   
T Consensus        85 ~~~~~--------~~v~~--t~~gt~A~~~al~~~--~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~  152 (467)
T 2oqx_A           85 NIFGY--------QYTIP--THQGRGAEQIYIPVL--IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIK  152 (467)
T ss_dssp             HHHCC--------SEEEE--EC--CCSHHHHHHHH--HHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCT
T ss_pred             HHhCc--------CcEEE--cCCcHHHHHHHHHHH--hccccccCCCCccceEEecccccccchhhhhccCcceeecccc
Confidence            99732        57888  999999999985544  446     7    998887544444444444455443322   


Q ss_pred             ---eee--cCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCC----
Q 015283          156 ---RYY--DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG----  224 (410)
Q Consensus       156 ---~~~--~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~----  224 (410)
                         +..  ...++.+|++.+++.+++.+ ++++++++++|+||| |.+++.+++++|+++|++||++||+|+++..    
T Consensus       153 ~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~  232 (467)
T 2oqx_A          153 EAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAY  232 (467)
T ss_dssp             TTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHH
T ss_pred             ccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhh
Confidence               110  01345689999999997421 256777778999998 9999999999999999999999999966422    


Q ss_pred             ------CCCCCCCCchhHhHHH-hhcCCcEEEEeccccccccc-CCCcceEEEEeCCch-hH---HHHHHHHHhhccC-c
Q 015283          225 ------FASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSD-LA---ARVKSQLKRLARP-M  291 (410)
Q Consensus       225 ------~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~-~~---~~~~~~~~~~~~~-~  291 (410)
                            ..+.+  .+...+... .... + +++.|+||.+|++ |   ||++  + +++ ++   .++.......... .
T Consensus       233 ~~~~~~~~~~g--~~~~~~~~~~~~~~-d-~~~~s~sK~~g~~~G---g~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~  302 (467)
T 2oqx_A          233 FIKQREAEYKD--WTIEQITRETYKYA-D-MLAMSAKKDAMVPMG---GLLC--M-KDDSFFDVYTECRTLCVVQEGFPT  302 (467)
T ss_dssp             HHHHHCGGGTT--SCHHHHHHHHGGGC-S-EEEEESSSTTCCSSC---EEEE--E-CSGGGHHHHHHHHHHHHHTTSSCC
T ss_pred             hcccccccccC--ccHHHHhhhhhccC-C-eEEEecccccCCCCc---eEEE--e-cChhHHHHHHHHHHhhhccCCccc
Confidence                  12211  111111100 0122 2 4578999999866 3   5653  3 444 33   3333221101000 1


Q ss_pred             ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C
Q 015283          292 YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N  364 (410)
Q Consensus       292 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~  364 (410)
                      +...+..+..++...+.+      +.+  ++..++.+++++++.+.|+ +++    +.+. +.+++++|+.+       +
T Consensus       303 ~~~~~~~~~~al~~~l~~------~~~--~~~~~~~~~~~~~l~~~L~-~~~----~~~~-~~~~~~~~~~~~~~~~~~~  368 (467)
T 2oqx_A          303 YGGLEGGAMERLAVGLYD------GMN--LDWLAYRIAQVQYLVDGLE-EIG----VVCQ-QAGGHAAFVDAGKLLPHIP  368 (467)
T ss_dssp             CCCCCHHHHHHHHHHHHH------TTC--HHHHHHHHHHHHHHHHHHH-HTT----CCEE-EECSSCEEEEHHHHSTTSC
T ss_pred             ccchhhhHHHHHHHhhHh------hhh--HHHHHHHHHHHHHHHHHHH-HCC----Ceee-cCCceEEEEechhhcccCC
Confidence            111122221111111110      000  1223445677888888898 765    3444 55677777643       2


Q ss_pred             H-H-----HHHHhhhcCcEEEcC-C------------------C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          365 K-A-----QSDNMTNKWHVYMTK-D------------------G--RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       365 ~-~-----~~~~ll~~~gi~v~~-~------------------g--Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                      . +     +...+++++||.+.| +                  +  ||+++.  .+++++++++++|++++++
T Consensus       369 ~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~  441 (467)
T 2oqx_A          369 ADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_dssp             GGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred             cccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence            1 1     255663567999875 2                  3  888773  4899999999999998764

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.93  E-value=2.3e-25  Score=209.80  Aligned_cols=290  Identities=11%  Similarity=-0.029  Sum_probs=182.2

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC--EEEEcCCCCcchhh---hh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISSPTWGNHKN---IF  145 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd--~Vl~~~p~y~~~~~---~~  145 (410)
                      ..|++..+..++++++++++..        +..++  +++|++++.++.  .....+||  .|+++.++|..+..   ..
T Consensus        41 ~~y~~~~~~~~l~~~la~~~~~--------~~~i~--~~~G~~a~~~al--~~~~~~gd~~~vi~~~~~~~~~~~~~~~~  108 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVLGM--------DDAVF--FPSGTMAQQVAL--RIWSDETDNRTVAYHPLCHLEIHEQDGLK  108 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHHH--HHHHHHHTCCEEEECTTCHHHHSSTTHHH
T ss_pred             ccccCChHHHHHHHHHHHHhCC--------CcEEE--ecCcHHHHHHHH--HHHhhcCCCcEEEecccceeeeeccchhh
Confidence            5687777899999999999643        22344  578888888763  33355777  67776666544332   34


Q ss_pred             hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCC
Q 015283          146 NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG  224 (410)
Q Consensus       146 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~  224 (410)
                      ...|.+++.++.   +++.+|++++++..     +++++++++|+||| |.+++.+++++|+++|++||++||+|++|..
T Consensus       109 ~~~g~~~~~v~~---~~~~~d~~~l~~~~-----~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~  180 (357)
T 3lws_A          109 ELHPIETILVGA---ADRLMTLDEIKALP-----DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLF  180 (357)
T ss_dssp             HHSSCEEEECSC---TTSCCCHHHHHTCC-----SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHH
T ss_pred             hccCcEEEEecC---CCCCcCHHHHhcCc-----CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhh
Confidence            456777777763   34578999988761     25667789999998 9999999999999999999999999999752


Q ss_pred             CCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH
Q 015283          225 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA  304 (410)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  304 (410)
                      ........   ....+....  .+++.|+||.++.++.  ||++.   ++++++++...........  ......+.++.
T Consensus       181 ~~~~~~~~---~~~~~~~~~--d~~~~s~sK~~~~~~g--g~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  248 (357)
T 3lws_A          181 EMLPYYEK---TAAEIAGLF--DSIYISFYKGLGGIAG--AILAG---PAAFCQTARIWKRRYGGDL--ISLYPYIVSAD  248 (357)
T ss_dssp             HHHHHHTC---CHHHHHTTS--SEEEEESSSTTCCSSC--EEEEE---CHHHHHHHHHHHHHTTCCC--SCCHHHHHHHH
T ss_pred             hhhhhcCC---ChHHHHhcC--CEEEEeccccCCCCce--EEEEc---CHHHHHHHHHHHHHhcCCc--ccchHHHHHHH
Confidence            11000001   111222222  2447899999943322  88644   8887776654322111111  11222222222


Q ss_pred             HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc-ccCCcceeeecCC--C----HHHHHHhhhcCcE
Q 015283          305 NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGL--N----KAQSDNMTNKWHV  377 (410)
Q Consensus       305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~--~----~~~~~~ll~~~gi  377 (410)
                      ..|++      |   . +..+++.++++++.+.|+ +++.   +.+ ..+..++|+|+.+  .    .+.+.+.+.++||
T Consensus       249 ~~l~~------~---~-~~~~~~~~~~~~l~~~L~-~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi  314 (357)
T 3lws_A          249 YYYEL------R---K-DRMGQYYEQAKQLAEQFN-ALPG---VHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGL  314 (357)
T ss_dssp             HHHHH------H---T-TCHHHHHHHHHHHHHHHH-TSTT---EEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCE
T ss_pred             HHHHH------H---H-HHHHHHHHHHHHHHHHHH-hCCC---CeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCe
Confidence            22221      1   1 222345677888889998 7731   454 3456677888754  2    2334444555799


Q ss_pred             EEcCC-----C----eEEecC----CCcccHHHHHHHHHHHh
Q 015283          378 YMTKD-----G----RISLAG----LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       378 ~v~~~-----g----Ris~~~----~~~~~i~~~~~~l~~~l  406 (410)
                      .+.|+     +    |+++..    .+.+++++++++|++++
T Consensus       315 ~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          315 GFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             ESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             EEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence            99886     2    777652    36788899999988775

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.93  E-value=1.8e-24  Score=208.12  Aligned_cols=198  Identities=18%  Similarity=0.106  Sum_probs=145.1

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcc----cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER  124 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g----~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~  124 (410)
                      ..+++++.+.+++.+.+.......|++..|    ..++++.+++++    +.    ++.++  +++|++++.++  +...
T Consensus        10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g~----~~~i~--~~~gt~al~~~--~~~~   77 (418)
T 2c81_A           10 EWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----GV----PYCVP--TTSGSTALMLA--LEAL   77 (418)
T ss_dssp             CSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----TC----SEEEE--ESCHHHHHHHH--HHHT
T ss_pred             CCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----CC----CcEEE--eCCHHHHHHHH--HHHc
Confidence            445567999999988876543234766667    566777777774    22    24555  68889999887  3333


Q ss_pred             -hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283          125 -YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE  203 (410)
Q Consensus       125 -~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~  203 (410)
                       +.+||+|+++.|+|..+...++..|++++.+++. .+++.+|++.+++.+++   ++++++   ++||||..   .+++
T Consensus        78 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~~~~G~~---~~~~  147 (418)
T 2c81_A           78 GIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVE-ADTYCIDPQLIKSAITD---KTKAII---PVHLFGSM---ANMD  147 (418)
T ss_dssp             TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCHHHHGGGCCT---TEEEEC---CBCCTTCC---CCHH
T ss_pred             CCCCcCEEEECCCccHhHHHHHHHcCCEEEEEecC-CCCCCcCHHHHHHhhCC---CCeEEE---EeCCcCCc---ccHH
Confidence             5699999999999999999999999999999873 34678999999988864   567666   35799984   5678


Q ss_pred             HHHHHHHHcCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHH
Q 015283          204 KIADVIQEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       204 ~i~~~~~~~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      +|.++|+++|+++|+|++|..+. +.+   ...     ....  .+.+.||  ||.++. | |+||+  +++++++++++
T Consensus       148 ~i~~~~~~~~~~li~D~a~~~~~~~~~---~~~-----~~~~--~~~~~s~s~~K~~~~-g-~~g~~--~~~~~~l~~~~  213 (418)
T 2c81_A          148 EINEIAQEHNLFVIEDCAQSHGSVWNN---QRA-----GTIG--DIGAFSCQQGKVLTA-G-EGGII--VTKNPRLFELI  213 (418)
T ss_dssp             HHHHHHHHTTCEEEEECTTCTTCEETT---EET-----TSSS--SEEEEECCTTSSSCS-S-SCEEE--EESCHHHHHHH
T ss_pred             HHHHHHHHCCCEEEEECcccccCccCC---Eec-----cccc--ceEEEeccCCcccCC-C-CeEEE--EECCHHHHHHH
Confidence            88888999999999999998876 321   111     1111  3667777  999996 8 99997  44456766666


Q ss_pred             HH
Q 015283          281 KS  282 (410)
Q Consensus       281 ~~  282 (410)
                      ..
T Consensus       214 ~~  215 (418)
T 2c81_A          214 QQ  215 (418)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.93  E-value=5.9e-25  Score=213.28  Aligned_cols=340  Identities=11%  Similarity=0.014  Sum_probs=210.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHH-H-HHHH---hhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVK-K-AENL---MLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~-~-a~~~---~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      ...+|+..|.+-...|+.  +|.+. + ++.+   .+....  ...| +.....++++.+++++..     ...++|++ 
T Consensus        54 ~~ylD~~~~~~~~~lG~~--~p~v~~~~A~~~~~~~~~~~~~~~~~~-~~~~~~~la~~la~~~~~-----~~~~~v~~-  124 (449)
T 2cjg_A           54 RRYLDMFTFVASSALGMN--PPALVDDREFHAELMQAALNKPSNSDV-YSVAMARFVETFARVLGD-----PALPHLFF-  124 (449)
T ss_dssp             CEEEESSHHHHTCSSCBS--CHHHHTCHHHHHHHHHHHTCCCCTTTC-CCHHHHHHHHHHHHHHCC-----TTCCEEEE-
T ss_pred             cEEEEccCCccccCCCCC--CHHHHHHHHHHHHHHHHHhcCCCCccc-CCHHHHHHHHHHHHhcCC-----CCCCEEEE-
Confidence            356788777652233432  68888 8 8877   654321  1123 333456788888888641     13678999 


Q ss_pred             ecCChhhHHHHHHHHHHHhC------------CCCEEEEcCCCCcchhhhhh-hCCC-------------Cccceeeec-
Q 015283          107 QGLSGTGSLRLAAALIERYF------------PGAKVLISSPTWGNHKNIFN-DARV-------------PWSEYRYYD-  159 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~------------~gd~Vl~~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~-  159 (410)
                       ++||++|++.+++++..+.            +||+|++.+|+|.++..... ..|.             .+..+|..+ 
T Consensus       125 -~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  203 (449)
T 2cjg_A          125 -VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRP  203 (449)
T ss_dssp             -ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCT
T ss_pred             -eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCc
Confidence             9999999999876554322            28999999999987654322 2221             334444422 


Q ss_pred             -CCC------cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          160 -PKT------VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       160 -~~~------~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                       .+.      ...+++.+++.+++..++++++++++++||||. +++.+++++|.++|++||+++|+||+|.+++..+  
T Consensus       204 ~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g--  281 (449)
T 2cjg_A          204 GLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTG--  281 (449)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS--
T ss_pred             hhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccC--
Confidence             110      024556688888643346777776666899995 8899999999999999999999999999887532  


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH-HHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS-QLKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                       ..+.+.. .+...+++   |+||.+     |+||+++   ++++++.+.. .........+.+.+.+++.++...|+..
T Consensus       282 -~~~~~~~-~~~~~di~---t~sK~l-----~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~  348 (449)
T 2cjg_A          282 -TAWAYQQ-LDVAPDIV---AFGKKT-----QVCGVMA---GRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVI  348 (449)
T ss_dssp             -SSSTHHH-HTCCCSEE---EECGGG-----SSEEEEE---CGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred             -cceeecc-cCCCceEE---EecCcc-----cEEEEEE---CHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHH
Confidence             1222222 22233433   789987     7899854   6675443211 0111111122345566666665554311


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCCC
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKDG  383 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~g  383 (410)
                            .+  +...++++++++++.+.|+ ++.  .+..+....+. |.|+++.+.     .++..++++ +||.+.++|
T Consensus       349 ------~~--~~~~~~~~~~~~~l~~~L~-~l~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~g  417 (449)
T 2cjg_A          349 ------EA--EGLFERAVQHGKYLRARLD-ELAADFPAVVLDPRGR-GLMCAFSLPTTADRDELIRQLWQ-RAVIVLPAG  417 (449)
T ss_dssp             ------HH--HTHHHHHHHHHHHHHHHHH-HHHHHSTTTSEEEEEE-TTEEEEECSSHHHHHHHHHHHHH-TTEECEEET
T ss_pred             ------Hh--ccHHHHHHHHHHHHHHHHH-HHHhhCCCceeeEeec-cEEEEEEECChHHHHHHHHHHHH-CCeEEecCC
Confidence                  11  2345666777777777776 542  11002223344 445445542     235667765 699999875


Q ss_pred             ----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          384 ----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 ----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                          ||+++. .+++++++++++|+++++++
T Consensus       418 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          418 ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence                886543 49999999999999998764

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.93  E-value=2.7e-24  Score=205.07  Aligned_cols=304  Identities=12%  Similarity=-0.001  Sum_probs=201.6

Q ss_pred             ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEE
Q 015283           53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKV  131 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~V  131 (410)
                      .++.+.+++.+.+...   .|.+..+..++++++++++..        +++++  ++||++++.++.  ... +.+||+|
T Consensus        18 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~al~~~~--~~~~~~~gd~V   82 (393)
T 1mdo_A           18 MGAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTGN--------QYAVA--VSSATAGMHIAL--MALGIGEGDEV   82 (393)
T ss_dssp             CCHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHCC--------SEEEE--ESCHHHHHHHHH--HHTTCCTTCEE
T ss_pred             CCHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhCC--------CcEEE--ecChHHHHHHHH--HHcCCCCCCEE
Confidence            3577788888877553   244567889999999999732        36777  899999999983  333 5699999


Q ss_pred             EEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 015283          132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE  211 (410)
Q Consensus       132 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~  211 (410)
                      ++++|+|..+...++..|.+++.+++. ++++.+|++.+++.+++   +++++++   +||||.+.   ++++|.++|++
T Consensus        83 l~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~---~~~~v~~---~~~~G~~~---~~~~i~~l~~~  152 (393)
T 1mdo_A           83 ITPSMTWVSTLNMIVLLGANPVMVDVD-RDTLMVTPEHIEAAITP---QTKAIIP---VHYAGAPA---DLDAIYALGER  152 (393)
T ss_dssp             EEESSSCHHHHHHHHHTTCEEEEECBC-TTTCCBCHHHHHHHCCT---TEEEECC---BCGGGCCC---CHHHHHHHHHH
T ss_pred             EeCCCccHhHHHHHHHCCCEEEEEecc-CCcCCCCHHHHHHhcCC---CceEEEE---eCCCCCcC---CHHHHHHHHHH
Confidence            999999999999999999999999874 34577999999999875   5666664   35899965   47788888999


Q ss_pred             cCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283          212 KNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP  290 (410)
Q Consensus       212 ~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~  290 (410)
                      +|+++|+|++|..+. +.   ...+      ..  .++++.|+||..+++|.|+||+  +++++++++++..........
T Consensus       153 ~~~~li~D~a~~~g~~~~---~~~~------~~--~d~~~~S~~k~K~l~~~~~g~~--~~~~~~~~~~l~~~~~~~~~~  219 (393)
T 1mdo_A          153 YGIPVIEDAAHATGTSYK---GRHI------GA--RGTAIFSFHAIKNITCAEGGIV--VTDNPQFADKLRSLKFHGLGV  219 (393)
T ss_dssp             HTCCBCEECTTCTTCEET---TEET------TS--SSEEEEECCTTSSSCSSSCEEE--EESCHHHHHHHHHHTBTTEEC
T ss_pred             cCCeEEEECccccCCeEC---Ceec------CC--CCeEEEeCCCCCccccccceEE--EeCCHHHHHHHHHHHhcCCcc
Confidence            999999999988533 21   1111      11  6788999993333455688997  444477666655422110000


Q ss_pred             ----------cc----------cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283          291 ----------MY----------SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF  350 (410)
Q Consensus       291 ----------~~----------~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~  350 (410)
                                .+          ...+.+.+.++...+.          .+++..++.+++++++.+.|. ++++    ++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~----------~~~~~~~~~~~~~~~l~~~L~-~~~~----~~  284 (393)
T 1mdo_A          220 DAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ----------KLDALNARRAAIAAQYHQAMA-DLPF----QP  284 (393)
T ss_dssp             C-----------CCEESSCCCBCCCCHHHHHHHHHHHH----------THHHHHHHHHHHHHHHHHHHH-TSSC----EE
T ss_pred             cchhhhcccccccccccccCccCCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHh-cCCc----cc
Confidence                      00          0123333222222222          234555566678888888888 7652    32


Q ss_pred             c-c-----CCcceeeecCC-------CHHHHHHhhhcCcEEEcCC----------------------------C-eEEec
Q 015283          351 I-L-----RQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKD----------------------------G-RISLA  388 (410)
Q Consensus       351 ~-~-----~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~----------------------------g-Ris~~  388 (410)
                      . .     +.+++++|+.+       +.+.+.+.+.++||.+.++                            . |+++.
T Consensus       285 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~  364 (393)
T 1mdo_A          285 LSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLF  364 (393)
T ss_dssp             CCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCC
T ss_pred             ccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCC
Confidence            2 1     13444555433       3444443344469987652                            1 66665


Q ss_pred             C-CCcccHHHHHHHHHHHhhhc
Q 015283          389 G-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       389 ~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      . .+++++++++++|++++...
T Consensus       365 ~~~t~~~i~~~~~~l~~~~~~~  386 (393)
T 1mdo_A          365 PDMTESDFDRVITALHQIAGQG  386 (393)
T ss_dssp             TTCCHHHHHHHHHHHHHHHC--
T ss_pred             CCCCHHHHHHHHHHHHHHHhcC
Confidence            2 58999999999999998653

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.93  E-value=1.1e-24  Score=211.36  Aligned_cols=199  Identities=14%  Similarity=0.108  Sum_probs=140.6

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FN  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~  146 (410)
                      ..|. ..|.+ +++++++++.+.++.    +++++  +++|++++..+   +..+.+||+|++++|+|..+...    ++
T Consensus       125 ~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~--~~sGt~al~~~---l~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~  193 (464)
T 1ibj_A          125 YDYT-RSGNP-TRDALESLLAKLDKA----DRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVP  193 (464)
T ss_dssp             CSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEE--ESSHHHHHHHH---HTTSCTTCEEEEESSCCHHHHHHHHHTSG
T ss_pred             cccc-CCCCH-HHHHHHHHHHHHhCC----CeEEE--ECCHHHHHHHH---HHHhCCCCEEEEECCCchhHHHHHHHHHH
Confidence            4564 34544 566666665554442    35666  68889888776   23467999999999999998753    56


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA  226 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~  226 (410)
                      ..|.+++.++.       .|++++++.+.+   +++++++++|+||||.+++   +++|+++|++||+++|+||+|....
T Consensus       194 ~~G~~v~~v~~-------~d~~~l~~~i~~---~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g~  260 (464)
T 1ibj_A          194 RSGVVVKRVNT-------TKLDEVAAAIGP---QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPV  260 (464)
T ss_dssp             GGTCEEEEECT-------TSHHHHHHHCCS---SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTT
T ss_pred             HcCCEEEEeCC-------CCHHHHHHHhcc---CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcccc
Confidence            67888888876       278999998864   7888889999999999885   7788888999999999999987532


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                      ..    .  .+    . .+.++++.|+||.++. +|+|+||+++  +++++++++.....    ....+.+...+.++..
T Consensus       261 ~~----~--~~----~-~~~div~~S~sK~~~g~~Gl~~G~l~~--~~~~l~~~l~~~~~----~~g~~~~~~~~~a~~~  323 (464)
T 1ibj_A          261 LS----R--PL----E-LGADIVMHSATKFIAGHSDVMAGVLAV--KGEKLAKEVYFLQN----SEGSGLAPFDCWLCLR  323 (464)
T ss_dssp             TC----C--GG----G-TTCSEEEEETTTTTTCSSCCCCEEEEE--CSHHHHHHHHHHHH----HTTCBCCHHHHHHHHH
T ss_pred             cC----C--hh----h-cCCEEEEECCcccccCCCCCcEEEEEE--ChHHHHHHHHHHHH----hcCCCCCHHHHHHHHh
Confidence            11    1  11    1 2478999999999864 4899999844  34576666544321    1122345666666666


Q ss_pred             HhCCh
Q 015283          306 VVGNP  310 (410)
Q Consensus       306 ~l~~~  310 (410)
                      .|++.
T Consensus       324 al~~~  328 (464)
T 1ibj_A          324 GIKTM  328 (464)
T ss_dssp             HHTTH
T ss_pred             chhhH
Confidence            66653

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.93  E-value=2.6e-24  Score=206.85  Aligned_cols=327  Identities=17%  Similarity=0.147  Sum_probs=193.0

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC------cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      ..++|..+..      + +++.+.+++.+.+.......|      .......++++.+.+++...++.  ++++|++  +
T Consensus        26 ~~i~l~~~~~------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~i~~--~   94 (417)
T 3n0l_A           26 EGLEMIASEN------F-TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNC--KFANVQP--N   94 (417)
T ss_dssp             HSEECCTTCC------C-CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCC--S
T ss_pred             cCeeeecccC------C-CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCC--CCcceEe--c
Confidence            4577765442      2 379999998887633221233      22233345555333333222222  2456766  5


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL  185 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii  185 (410)
                      +| ++++.+++.  ..+.+||+|++++|+|..+..   .+...|..+..+++.-++++.+|++.+++.+.+  +++++++
T Consensus        95 sG-t~a~~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~--~~~~~v~  169 (417)
T 3n0l_A           95 SG-SQANQGVYA--ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKK--EKPKLIV  169 (417)
T ss_dssp             SH-HHHHHHHHH--HHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHH--HCCSEEE
T ss_pred             cH-HHHHHHHHH--HhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHh--cCCeEEE
Confidence            55 899998843  347799999999999987654   333444444444432235677999999999974  1455666


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      +++|+|  |...+   +++|.++|++||+++|+||+|. +..+.+...  ..      ....++++.|+||.+  +|+|.
T Consensus       170 ~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~--~~------~~~~di~~~s~sK~l--~g~~~  234 (417)
T 3n0l_A          170 CGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHP--SP------FPYAHVVSSTTHKTL--RGPRG  234 (417)
T ss_dssp             ECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC--CC------TTTCSEEEEESSTTT--CSCSC
T ss_pred             ECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCC--Cc------cccceEEEeeCcccc--CCCCe
Confidence            677776  77666   7788888999999999999953 222111000  00      012468899999987  68899


Q ss_pred             ceEEEEeCCchhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          265 GAMNVVCSSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ||++  ++++++.+.+....    ... ..+++...+.++...+..     .+.+++++.+++++++++++.+.|+ +.|
T Consensus       235 G~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~aa~~~a~~~-----~~~~~~~~~~~~~~~~~~~l~~~L~-~~g  302 (417)
T 3n0l_A          235 GIIM--TNDEELAKKINSAI----FPGIQGGPLMHVIAAKAVGFKF-----NLSDEWKVYAKQVRTNAQVLANVLM-DRK  302 (417)
T ss_dssp             EEEE--ESCHHHHHHHHHHH----TTTTCSSCCHHHHHHHHHHHHH-----HTSHHHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             eEEE--ECCHHHHHHHhhhh----CCcccCCcHHHHHHHHHHHHHH-----HHhhhHHHHHHHHHHHHHHHHHHHH-hCC
Confidence            9984  44467655554432    222 223333332222222211     0123346778888889999999998 766


Q ss_pred             CCCCccccc-CCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------------C-eEEecC-----CCcccHHHH
Q 015283          344 SGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISLAG-----LSLAKCEYL  398 (410)
Q Consensus       344 ~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------------g-Ris~~~-----~~~~~i~~~  398 (410)
                          +.... +..+.++|+.+     +.+.+.++++++||.+.+.             + |+++..     +++++++++
T Consensus       303 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~  378 (417)
T 3n0l_A          303 ----FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIV  378 (417)
T ss_dssp             ----CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHH
T ss_pred             ----ceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHH
Confidence                34333 23344555532     5666777777789998742             1 776542     468999999


Q ss_pred             HHHHHHHhhh
Q 015283          399 ADAIIDSYHN  408 (410)
Q Consensus       399 ~~~l~~~l~~  408 (410)
                      +++|+++++.
T Consensus       379 ~~~l~~~l~~  388 (417)
T 3n0l_A          379 SNYIADILDD  388 (417)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHhc
Confidence            9999999864

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.93  E-value=2.1e-24  Score=208.57  Aligned_cols=329  Identities=16%  Similarity=0.115  Sum_probs=191.2

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---CccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      +.+.|..+.+      ++.++.+.+++.+.+....   ...|..    .....++|+++++++..      ++++|++  
T Consensus        18 ~~~~Ld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--   83 (432)
T 3a9z_A           18 RKVYMDYNAT------TPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGG------KPQDIIF--   83 (432)
T ss_dssp             CCEECBTTTC------CCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTC------CGGGEEE--
T ss_pred             CcEEeeCCcc------CCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCC------CcCeEEE--
Confidence            4555655543      3457899999888764311   012211    11246899999999732      2678999  


Q ss_pred             cCChhhHHHHHHHHHHH-h-----CCCCEEEEcCCCCcch-----------------hhhhhhCCCCccceeeecCCCcc
Q 015283          108 GLSGTGSLRLAAALIER-Y-----FPGAKVLISSPTWGNH-----------------KNIFNDARVPWSEYRYYDPKTVG  164 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~-~-----~~gd~Vl~~~p~y~~~-----------------~~~~~~~g~~~~~v~~~~~~~~~  164 (410)
                      ++||++++.++...+.. +     .+||+|+++.|+|..+                 ....+..|.+++.+++.+ +++.
T Consensus        84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~  162 (432)
T 3a9z_A           84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK-VNGQ  162 (432)
T ss_dssp             ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCT-TTSS
T ss_pred             eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCc-ccCC
Confidence            99999999998554421 1     4899999999999876                 233345789999998742 2467


Q ss_pred             cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC----------CcccccccCCCCCCCCCCCch
Q 015283          165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN----------HIPFFDVAYQGFASGSLDNDA  234 (410)
Q Consensus       165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~----------~~li~Deay~~~~~~~~~~~~  234 (410)
                      +|++.+++.+.+   +++++++++|+||||.+++.+   +|.++|++++          +++|+|++|..+..   ..  
T Consensus       163 ~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~~~---~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~---~~--  231 (432)
T 3a9z_A          163 VEVEDILAAVRP---TTCLVTIMLANNETGVIMPIS---EISRRIKALNQIRAASGLPRVLVHTDAAQALGKR---RV--  231 (432)
T ss_dssp             CCHHHHHHTCCT---TEEEEECCSBCTTTCBBCCHH---HHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS---CC--
T ss_pred             cCHHHHHHhccC---CceEEEEECcccCcccccCHH---HHHHHHHhcCcccccccCCceEEEEEchhhhCCc---cc--
Confidence            899999998864   678888999999999999865   5677799998          99999999865331   11  


Q ss_pred             hHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh-HHHHHHHHHh---hccCcccCCChhHHHHHHHHhCCh
Q 015283          235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL-AARVKSQLKR---LARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       235 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                       .+..   .. ..+++.|+||.+|   .|+||+++   +++. ...+......   .......+++..++.++...++. 
T Consensus       232 -~~~~---~~-~d~~~~s~~K~~g---~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~-  299 (432)
T 3a9z_A          232 -DVED---LG-VDFLTIVGHKFYG---PRIGALYV---RGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADL-  299 (432)
T ss_dssp             -CHHH---HC-CSEEEEEGGGTTC---CSCEEEEE---TTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHH-
T ss_pred             -Chhh---cC-CCEEEEehhHhcC---CcceEEEE---ccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHH-
Confidence             1111   12 2356899999864   56899854   4442 1111100000   00011123444444444333331 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccC--------CcceeeecCC--CHHH-HHHhh---hcC
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILR--------QIGMFSFTGL--NKAQ-SDNMT---NKW  375 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~--------~~~~~~~~~~--~~~~-~~~ll---~~~  375 (410)
                           +.+.+++.+++++++++++.+.|+ ++ |..  +.+..+        ....|.+.+.  +.+. ...+.   .+.
T Consensus       300 -----~~~~~~~~~~~~~~~~~~l~~~L~-~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~  371 (432)
T 3a9z_A          300 -----VSENCETYEAHMRDIRDYLEERLE-AEFGKR--IHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASV  371 (432)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHH-HHHGGG--EEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBS
T ss_pred             -----HHhhHHHHHHHHHHHHHHHHHHHH-hccCCc--EEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEec
Confidence                 123456788889999999999888 64 410  111111        1122344432  3333 33221   112


Q ss_pred             cEEEcC-------------C-------C--eEEecCC-CcccHHHHHHHHHHHhhhc
Q 015283          376 HVYMTK-------------D-------G--RISLAGL-SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       376 gi~v~~-------------~-------g--Ris~~~~-~~~~i~~~~~~l~~~l~~~  409 (410)
                      |+.+.+             |       +  ||+++.. +++++++++++|+++++++
T Consensus       372 G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~  428 (432)
T 3a9z_A          372 GASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL  428 (432)
T ss_dssp             SCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence            322211             1       3  9998753 7999999999999988653

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.93  E-value=1.3e-24  Score=207.31  Aligned_cols=313  Identities=14%  Similarity=0.023  Sum_probs=200.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +++++++.|.|       .+++.+.+++.+.+..+   .|. +..+..++|+++++++..        +++++  ++|||
T Consensus        22 ~~~~~l~~~~p-------~~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~~gt   81 (391)
T 3dr4_A           22 SDLPRISVAAP-------RLDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCGV--------KHAIA--CNNGT   81 (391)
T ss_dssp             ------CCCCC-------CCCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHTC--------SEEEE--ESSHH
T ss_pred             CCCceeccCCC-------CCCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhCC--------CcEEE--eCCHH
Confidence            46778887765       23578888887776543   354 677899999999999733        25666  89999


Q ss_pred             hHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          113 GSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       113 ~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      +++..+  +... +.+||+|++++|+|..+...++..|.+++.+++. .+++.+|++.+++.+++   ++++++   |+|
T Consensus        82 ~al~~~--l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~---~~~~v~---~~n  152 (391)
T 3dr4_A           82 TALHLA--LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDND-PRTFNLDAAKLEALITP---RTKAIM---PVH  152 (391)
T ss_dssp             HHHHHH--HHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCGGGSGGGCCT---TEEEEC---CBC
T ss_pred             HHHHHH--HHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecC-ccccCcCHHHHHHhcCC---CceEEE---EEC
Confidence            999987  3444 5699999999999999999999999999999883 35678999999988864   666666   678


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEE
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNV  269 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~  269 (410)
                      |||...   ++++|.++|+++|+++|+|++|...... .+.   .   . ... ..+.+.|||  |.++  |.+.|++  
T Consensus       153 ~tG~~~---~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~---~---~-~~~-~di~~~S~s~~K~l~--~g~gg~~--  216 (391)
T 3dr4_A          153 LYGQIC---DMDPILEVARRHNLLVIEDAAEAVGATY-RGK---K---S-GSL-GDCATFSFFGNAIIT--TGEGGMI--  216 (391)
T ss_dssp             GGGCCC---CHHHHHHHHHHTTCEEEEECTTCTTCEE-TTE---E---T-TSS-SSEEEEECBTTSSSC--CBSCEEE--
T ss_pred             CCCChh---hHHHHHHHHHHcCCEEEEECcccccceE-CCe---e---e-ccc-CCEEEEECCCCCcCC--cCCeEEE--
Confidence            999965   4677888899999999999998753321 000   0   0 011 136677766  6664  4567887  


Q ss_pred             EeCCchhHHHHHHHHHhhcc-------Cc---ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          270 VCSSSDLAARVKSQLKRLAR-------PM---YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      ++.++++.+++.........       ..   ......+  .++.....        .+.+++..++.+++.+++.+.|+
T Consensus       217 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l--~aa~~~~~--------~~~~~~~~~~~~~~~~~l~~~L~  286 (391)
T 3dr4_A          217 TTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNI--QAAIGLAQ--------LERVDEHLAARERVVGWYEQKLA  286 (391)
T ss_dssp             EESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHH--HHHHHHHH--------HHTHHHHHHHHHHHHHHHHHHHG
T ss_pred             EECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHH--HHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhh
Confidence            55666665555443211100       00   0112222  22221111        12234566777778888888888


Q ss_pred             hccCCCCCcccccC------Cccee-eec------CCCHHHHHHhhhcCcEEEcCCC-----------------------
Q 015283          340 AKDKSGKDWSFILR------QIGMF-SFT------GLNKAQSDNMTNKWHVYMTKDG-----------------------  383 (410)
Q Consensus       340 ~~~g~~~~~~~~~~------~~~~~-~~~------~~~~~~~~~ll~~~gi~v~~~g-----------------------  383 (410)
                       ++++    .+..+      ..+++ .++      +.+.+.+.+.+.++||.+.++.                       
T Consensus       287 -~~g~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~  361 (391)
T 3dr4_A          287 -RLGN----RVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEAC  361 (391)
T ss_dssp             -GGTT----SEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHH
T ss_pred             -cCCc----cccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHH
Confidence             7753    32222      12222 122      2235444444444699887651                       


Q ss_pred             -----eEEecC-CCcccHHHHHHHHHHHh
Q 015283          384 -----RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       384 -----Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                           |+++.. +|++|++++++.|++++
T Consensus       362 ~~~~lrl~~~~~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          362 GVDGLNLPTHAGLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             HHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred             HhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence                 555443 58999999999998875

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.92  E-value=1.4e-24  Score=212.13  Aligned_cols=316  Identities=12%  Similarity=0.026  Sum_probs=208.1

Q ss_pred             cHHHHHHHHHhhccCCCccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH--hCCC
Q 015283           54 LDVVKKAENLMLERGENKEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER--YFPG  128 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~--~~~g  128 (410)
                      .|.+.+++.+....  .+.|.+   ..|..++++++++++.+..|.+.   .+++  ++||++++..+...+..  ..+|
T Consensus        79 ~p~v~~~~~~~~~~--~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~--~~ggt~a~~~al~~~~~~~~~~G  151 (474)
T 1wyu_B           79 NPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLE--PAAGAHGELTGILIIRAYHEDRG  151 (474)
T ss_dssp             CCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECC--CSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHh--cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeec--ChHHHHHHHHHHHHHHHHHHhcC
Confidence            35566665554321  244543   45777888888888766555432   3445  89999999875434332  2488


Q ss_pred             C-----EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283          129 A-----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE  203 (410)
Q Consensus       129 d-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~  203 (410)
                      |     +|++++|+|+.+...+...|.+++.+++.  +++.+|++++++.+++   +++++++++| ||||.+  .++++
T Consensus       152 d~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~---~t~~v~~~~p-n~~G~~--~~~l~  223 (474)
T 1wyu_B          152 EGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGP---HVAALMLTNP-NTLGLF--ERRIL  223 (474)
T ss_dssp             CTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCST---TEEEEEECSS-CTTSCC--CTTHH
T ss_pred             CccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCC---CceEEEEECC-CCCccc--CCCHH
Confidence            7     99999999999999999999999999873  4678999999999975   6777888888 689986  25789


Q ss_pred             HHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc-C---CCcceEEEEeCCchhHHH
Q 015283          204 KIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-A---ERIGAMNVVCSSSDLAAR  279 (410)
Q Consensus       204 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G---~r~G~l~~~~~~~~~~~~  279 (410)
                      +|+++|++||+++|+|++|.....+.  ...      ... +.++++.|++|.|+.| |   .|+||+++   ++++++.
T Consensus       224 ~i~~l~~~~g~~li~Dea~~~~~~g~--~~~------~~~-g~di~~~s~~K~~~~p~g~gG~~~G~~~~---~~~l~~~  291 (474)
T 1wyu_B          224 EISRLCKEAGVQLYYDGANLNAIMGW--ARP------GDM-GFDVVHLNLHKTFTVPHGGGGPGSGPVGV---KAHLAPY  291 (474)
T ss_dssp             HHHHHHHHHTCEEEEEGGGGGGTTTT--CCH------HHH-TCSEEECCTTTTTCCCCTTSCCCCCCEEE---CGGGGGG
T ss_pred             HHHHHHHHcCCEEEEeCchhhhhccC--CCc------ccC-CCcEEEEeCccccccCCCCCCCCeEEEEE---cHHHHHh
Confidence            99999999999999999996554321  111      111 3568888999999876 4   59999865   6664443


Q ss_pred             HHHHHH-----hh----------ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          280 VKSQLK-----RL----------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       280 ~~~~~~-----~~----------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      +...+.     .+          .+......+..++.++...+....     .+.+++..+++.++++++.+.|+ +.| 
T Consensus       292 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g-----~~~l~~~~~~~~~~~~~l~~~L~-~~g-  364 (474)
T 1wyu_B          292 LPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLG-----LEGLKKAAALAVLNARYLKELLK-EKG-  364 (474)
T ss_dssp             CCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH-HTT-
T ss_pred             CCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHh-hcC-
Confidence            321000     00          000011234445555544443211     23456778889999999999998 765 


Q ss_pred             CCCcccccCCccee-eecC----CCH-HHHHHhhhcCcEEEc----C---CC--eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          345 GKDWSFILRQIGMF-SFTG----LNK-AQSDNMTNKWHVYMT----K---DG--RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       345 ~~~~~~~~~~~~~~-~~~~----~~~-~~~~~ll~~~gi~v~----~---~g--Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                         +++..+...++ .|+.    .+. ++.++|++ +||.+.    |   .+  ||+++. .+++++++++++|+++++
T Consensus       365 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~  439 (474)
T 1wyu_B          365 ---YRVPYDGPSMHEFVAQPPEGFRALDLAKGLLE-LGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK  439 (474)
T ss_dssp             ---CBCSSCSSCCSCEEEBCSTTCCHHHHHHHHHH-TTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred             ---cEecCCCCcceEEEEEcCCCCCHHHHHHHHHH-CCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence               33322221221 2332    344 45666766 498752    1   12  999864 378999999999998875

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.92  E-value=2.3e-24  Score=210.73  Aligned_cols=330  Identities=12%  Similarity=0.100  Sum_probs=207.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc------CcCCcccHHHHHHHHHHhcCCCCCcccC--CceEE
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNKVTAELLFGADNSVLKE--QRVAT  105 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~aia~~~~~~~~~~~~~--~~i~~  105 (410)
                      .+.|+|..|.+       ++++.+++++.+.+.+....+      |....+.+++++++.+++.+.+|...+.  .+|.+
T Consensus        44 ~~~i~L~a~e~-------~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~  116 (483)
T 1rv3_A           44 RVGLELIASEN-------FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQP  116 (483)
T ss_dssp             HSSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCC
T ss_pred             hcCeEEEcCCC-------CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEE
Confidence            35788876653       247999999988775432223      3333455677766666666666654221  23666


Q ss_pred             EecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh--------hhCCCCccceeee-cCCCcccChhhHHHHHhc
Q 015283          106 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--------NDARVPWSEYRYY-DPKTVGLDFEGMIADIKA  176 (410)
Q Consensus       106 ~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~--------~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~  176 (410)
                        ++|+ +++..+  +.+.+.|||+|++++|.|+++....        ...|..++.+++. +.+++.+|++++++.+.+
T Consensus       117 --~sGs-~an~~~--~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~  191 (483)
T 1rv3_A          117 --YSGS-PANFAV--YTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARL  191 (483)
T ss_dssp             --SSHH-HHHHHH--HHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH
T ss_pred             --CCcH-HHHHHH--HHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhh
Confidence              5555 777775  3445789999999999998876432        2233224555542 235688999999999983


Q ss_pred             CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283          177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSK  255 (410)
Q Consensus       177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  255 (410)
                        ++++++++ +++||+ .+.+   +++|.++|+++|+++++|++|. ++...+.  ...++    .  ..++++.|+||
T Consensus       192 --~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~--~~~p~----~--~~div~~s~~K  256 (483)
T 1rv3_A          192 --FHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGV--VPSPF----E--HCHVVTTTTHK  256 (483)
T ss_dssp             --HCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTS--SCCGG----G--TCSEEEEESSG
T ss_pred             --cCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCC--CCCCC----C--CCcEEEecCcc
Confidence              15566666 788888 7665   6788888999999999999965 2221111  11111    1  24578899999


Q ss_pred             cccccCCCcceEEEEeCCc--------------hhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283          256 NLGLYAERIGAMNVVCSSS--------------DLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEM  320 (410)
Q Consensus       256 ~~~~~G~r~G~l~~~~~~~--------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  320 (410)
                      ++  +|+|.||+++  +++              +..+++    ....... .++++.....++...+....     ...+
T Consensus       257 ~l--~GprgG~i~~--~~~~~~~~~~~g~~~~y~~~~~~----~~~~~~~~~g~~~~~~iaal~~Al~~~~-----~~~~  323 (483)
T 1rv3_A          257 TL--RGCRAGMIFY--RRGVRSVDPKTGKEILYNLESLI----NSAVFPGLQGGPHNHAIAGVAVALKQAM-----TPEF  323 (483)
T ss_dssp             GG--CCCSCEEEEE--ECSBCC-------CCBCCHHHHH----HHHHTTTTCCSCCHHHHHHHHHHHHHHT-----SHHH
T ss_pred             cC--CCCCceEEEE--cchhhhhccccCcchhhHHHHHh----hhhcCCcccCCccHHHHHHHHHHHHHHh-----ChhH
Confidence            87  5889999854  332              222222    2222211 22333333222222222100     1224


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC-cceeeecC-----CCHHHHHHhhhcCcEEEc----CC--------
Q 015283          321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-IGMFSFTG-----LNKAQSDNMTNKWHVYMT----KD--------  382 (410)
Q Consensus       321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~ll~~~gi~v~----~~--------  382 (410)
                      +++++++.++++++.+.|. +.|    +.+..+. ..++.|+.     ++.+.+.++|++.||.+.    ||        
T Consensus       324 ~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~  398 (483)
T 1rv3_A          324 KEYQRQVVANCRALSAALV-ELG----YKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPS  398 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HTT----CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCC
T ss_pred             HHHHHHHHHHHHHHHHHHH-hcC----CEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCc
Confidence            6778889999999999998 776    3544443 23455543     356666777777899998    64        


Q ss_pred             C-eEEecCC-C----cccHHHHHHHHHHHhhh
Q 015283          383 G-RISLAGL-S----LAKCEYLADAIIDSYHN  408 (410)
Q Consensus       383 g-Ris~~~~-~----~~~i~~~~~~l~~~l~~  408 (410)
                      + ||+++.. +    +++++++++.|++++..
T Consensus       399 ~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~  430 (483)
T 1rv3_A          399 GLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL  430 (483)
T ss_dssp             EEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             eEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence            1 9997642 3    89999999999998754

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.92  E-value=6.4e-24  Score=201.11  Aligned_cols=305  Identities=10%  Similarity=0.013  Sum_probs=201.6

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH---hCC
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER---YFP  127 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~---~~~  127 (410)
                      +++++.+++++.+.+...   .|.+.....++++++++++..        +++++  ++||++++.++.  ...   +.+
T Consensus         9 ~~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~~~~--~~~~~~~~~   73 (375)
T 2fnu_A            9 PCLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLGV--------KHALV--FNSATSALLTLY--RNFSEFSAD   73 (375)
T ss_dssp             CCCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHHH--HHSSCCCTT
T ss_pred             CCCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHHH--HHhcccCCC
Confidence            445799999999887543   244556788999999999732        27888  999999999983  333   569


Q ss_pred             CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283          128 GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD  207 (410)
Q Consensus       128 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~  207 (410)
                      ||+|++++|+|..+...+...|++++.+++.+  ++.+|++.+++.+++   +++++++++|   ||.+.+   +++|.+
T Consensus        74 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~---~~~~v~~~~~---tG~~~~---l~~i~~  142 (375)
T 2fnu_A           74 RNEIITTPISFVATANMLLESGYTPVFAGIKN--DGNIDELALEKLINE---RTKAIVSVDY---AGKSVE---VESVQK  142 (375)
T ss_dssp             SCEEEECSSSCTHHHHHHHHTTCEEEECCBCT--TSSBCGGGSGGGCCT---TEEEEEEECG---GGCCCC---HHHHHH
T ss_pred             CCEEEECCCccHhHHHHHHHCCCEEEEeccCC--CCCCCHHHHHhhcCc---CceEEEEeCC---cCCccC---HHHHHH
Confidence            99999999999999999999999999998842  237899999888864   5666664444   999765   677888


Q ss_pred             HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      +|++||+++|+|++|..+....  ..     . ..... ++.+.|+|  |.+++ |  +|++++ ++++++++++.....
T Consensus       143 l~~~~~~~li~D~a~~~~~~~~--~~-----~-~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~-~~~~~~~~~~~~~~~  209 (375)
T 2fnu_A          143 LCKKHSLSFLSDSSHALGSEYQ--NK-----K-VGGFA-LASVFSFHAIKPITT-A--EGGAVV-TNDSELHEKMKLFRS  209 (375)
T ss_dssp             HHHHHTCEEEEECTTCTTCEET--TE-----E-TTSSS-SEEEEECCTTSSSCC-S--SCEEEE-ESCHHHHHHHHHHTB
T ss_pred             HHHHcCCEEEEECccccCCeEC--Ce-----e-ccccC-CeEEEeCCCCCCccc-c--CceEEE-eCCHHHHHHHHHHHh
Confidence            8999999999999987544210  00     1 11111 47788888  99975 6  688732 345676666544221


Q ss_pred             hhcc---------Cccc---CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283          286 RLAR---------PMYS---NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR  353 (410)
Q Consensus       286 ~~~~---------~~~~---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~  353 (410)
                      ....         ....   ..+.+...++...+          +.+++..++.+++++++.+.|+ +++.   +.+..+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~----------~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~  275 (375)
T 2fnu_A          210 HGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQL----------KKAPFLMQKREEAALTYDRIFK-DNPY---FTPLHP  275 (375)
T ss_dssp             TTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHH----------TTHHHHHHHHHHHHHHHHHHHT-TCSS---EEESGG
T ss_pred             cCCccccccccccccccccCCCCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHhh-cCCC---ccccCC
Confidence            1100         0011   22332222222111          1235667778888999999998 7631   343333


Q ss_pred             ----Ccc-eeeecCC------CHH-HHHHhhhcCcEEEcC----C-----------------------C--eEEecC-CC
Q 015283          354 ----QIG-MFSFTGL------NKA-QSDNMTNKWHVYMTK----D-----------------------G--RISLAG-LS  391 (410)
Q Consensus       354 ----~~~-~~~~~~~------~~~-~~~~ll~~~gi~v~~----~-----------------------g--Ris~~~-~~  391 (410)
                          ..+ ++.++.+      +.+ +...| .++||.+..    +                       +  ||++.. .+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t  354 (375)
T 2fnu_A          276 LLKDKSSNHLYPILMHQKFFTCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLN  354 (375)
T ss_dssp             GCSSCCCCSCEEEEECGGGGGGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCC
T ss_pred             CCCCCcceEEEEEEeCccccchHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCC
Confidence                122 2223322      333 34455 456999872    1                       2  888764 48


Q ss_pred             cccHHHHHHHHHHHhhhc
Q 015283          392 LAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~~~  409 (410)
                      ++++++++++|+++++++
T Consensus       355 ~~~i~~~~~~l~~~~~~~  372 (375)
T 2fnu_A          355 LESVQNIAHSVLKTFESF  372 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            899999999999998764

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.92  E-value=3.2e-25  Score=208.97  Aligned_cols=306  Identities=12%  Similarity=-0.003  Sum_probs=190.7

Q ss_pred             ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCE--
Q 015283           53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK--  130 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~--  130 (410)
                      ++|.+.+++.+....   ..|.+..+..++++.+++++...        ..++  ++||++++.++..  ..+.+||+  
T Consensus        27 ~~p~v~~ai~~~~~~---~~~~~~~~~~~l~~~la~~~~~~--------~~i~--~~~g~~a~~~a~~--~~~~~g~~~v   91 (359)
T 3pj0_A           27 VLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKILGKQ--------SAVF--FPSGTMAQQIALR--IWADRKENRR   91 (359)
T ss_dssp             HHHHHTTTSCTTCBC---CBTTBSHHHHHHHHHHHHHHTCS--------EEEE--ESCHHHHHHHHHH--HHHHHHTCCE
T ss_pred             CCHHHHHHHHhhccc---CcccCCHHHHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHHHH--HHHhcCCCcE
Confidence            468888877764322   55777788999999999996332        2344  5888899888743  33557776  


Q ss_pred             EEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q 015283          131 VLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT-GIDPTPEQWEKIA  206 (410)
Q Consensus       131 Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt-G~~~~~~~l~~i~  206 (410)
                      |+++.++|..+..   .....|.+++.++.   +++.+|++++++. .   ++++++++++|+||| |.+++.+++++|+
T Consensus        92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~---~~~~~v~~~~p~n~~~G~~~~~~~l~~l~  164 (359)
T 3pj0_A           92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-R---EPVSSVLIELPQREIGGQLPAFEELEKIS  164 (359)
T ss_dssp             EEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-S---SCCSEEEEESSBGGGTSBCCCHHHHHHHH
T ss_pred             EEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-c---CCceEEEEEecccCCCcccCCHHHHHHHH
Confidence            5555555443322   12446888888775   4567899999877 3   366777889999998 7999999999999


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHh
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR  286 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~  286 (410)
                      ++|++||++||+|++|..+.......   ....+. . ...+++.|+||.++.++ + ||++   .++++++++......
T Consensus       165 ~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~-~-~~d~~~~s~sK~~~~~~-g-g~~~---~~~~l~~~~~~~~~~  234 (359)
T 3pj0_A          165 EYCHEQGISLHLDGARLWEITPFYQK---SAEEIC-A-LFDSVYVSFYKGIGGIA-G-AILA---GNDDFVQEAKIWKRR  234 (359)
T ss_dssp             HHHHHHTCEEEEEETTCGGGHHHHTC---CHHHHH-T-TCSEEEEESSSTTCCSS-C-EEEE---ECHHHHHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECcchhcchhhhCC---CHHHhh-c-cCCEEEEeccccCCCcc-e-EEEE---CCHHHHHHHHHHHHH
Confidence            99999999999999976443110001   111222 1 22355669999987552 2 5643   488877766543221


Q ss_pred             hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc-cCCcceeeecCC--
Q 015283          287 LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI-LRQIGMFSFTGL--  363 (410)
Q Consensus       287 ~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~--  363 (410)
                      ....  .......+.++...+++         .. +..+++.++++++.+.|+ ++..   +.+. .+..++|+|+.+  
T Consensus       235 ~~~~--~~~~~~~~~a~~~~l~~---------~~-~~~~~~~~~~~~l~~~L~-~~~g---~~~~~~~~~~~~~~~~~~~  298 (359)
T 3pj0_A          235 YGGD--LISLYPYILSADYYFEK---------RI-GKMAEYFEAAKGLAERFN-SCSG---VKTVPEVPVSNMFHVYFEN  298 (359)
T ss_dssp             TTCC--CSCCHHHHHHHHHHHHH---------HG-GGHHHHHHHHHHHHHHHH-TSTT---EEEESSSCSSSEEEEEESS
T ss_pred             hCCC--cchhHHHHHHHHHHHHH---------HH-HHhHHHHHHHHHHHHHHh-hCCC---ceeeccCCcceEEEEEecC
Confidence            1111  11122222222222221         11 233446778888899998 7621   4442 344556665533  


Q ss_pred             C----HHHHHHhhhcCcEEEcCCC----------eEEec----CCCcccHHHHHHHHHHHh
Q 015283          364 N----KAQSDNMTNKWHVYMTKDG----------RISLA----GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       364 ~----~~~~~~ll~~~gi~v~~~g----------Ris~~----~~~~~~i~~~~~~l~~~l  406 (410)
                      .    .+.+.+.+.++||.+.|+.          |+++.    ..+.+++++++++|++++
T Consensus       299 ~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~l  359 (359)
T 3pj0_A          299 SADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL  359 (359)
T ss_dssp             CHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             ccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhcC
Confidence            2    2334444455799999872          77664    236788888888888753

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.92  E-value=1.2e-24  Score=205.34  Aligned_cols=311  Identities=11%  Similarity=0.023  Sum_probs=194.0

Q ss_pred             CcccccHHHHHHHHHhhccCC--------CccCcCCcccHHHHHHHHHHhcCCCCCcccCC-c-eEEEecCChhhHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLERGE--------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-R-VATVQGLSGTGSLRLA  118 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~-i~~~~t~ggt~a~~~~  118 (410)
                      +..++++.+++++.+.+....        ..+|.+  +..++++++.+.+.+.+|.  +++ + +++  |+||++++..+
T Consensus        11 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~~i~~--t~g~t~a~~~~   84 (362)
T 2c0r_A           11 GPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGN--PTGYKVLFI--QGGASTQFAMI   84 (362)
T ss_dssp             SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTC--CSSEEEEEE--SSHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEE--CCCchHHHHHH
Confidence            444458999999988764210        011212  2334555555555444443  233 5 456  79999999998


Q ss_pred             HHHHHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeecC--CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          119 AALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDP--KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       119 ~~~~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                        +...+.+||+|+++++.+..+  ...++..| +++.++...+  .+..+|.++++  +.   ++++++++++|+||||
T Consensus        85 --~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~---~~t~~v~~~~~~n~tG  156 (362)
T 2c0r_A           85 --PMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ---DNAAYLHLTSNETIEG  156 (362)
T ss_dssp             --HHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC---TTEEEEEEESEETTTT
T ss_pred             --HHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC---CCcCEEEEeCCcCccc
Confidence              344477999999887664432  35666789 9999987422  22234665553  43   3788888899999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .+++  ++++|      +|+++++|++|..+...   .   .+    ...  ++++.|+||.+|++|  +||+++   ++
T Consensus       157 ~~~~--~l~~i------~~~~vivD~a~~~~~~~---~---~~----~~~--d~~~~s~~K~~g~~G--~G~l~~---~~  211 (362)
T 2c0r_A          157 AQFK--AFPDT------GSVPLIGDMSSDILSRP---F---DL----NQF--GLVYAGAQKNLGPSG--VTVVIV---RE  211 (362)
T ss_dssp             EECS--SCCCC------TTSCEEEECTTTTTSSC---C---CG----GGC--SEEEEETTTTTCCSS--CEEEEE---EG
T ss_pred             eecc--ccccc------CCCEEEEEChhhccCCc---c---ch----hHC--cEEEEeccccccCcC--cEEEEE---cH
Confidence            9754  34444      89999999998755421   1   11    112  477889999999888  799865   66


Q ss_pred             hhHHHHHHHHHh--------hccCcccCCChhHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHhhhccC-
Q 015283          275 DLAARVKSQLKR--------LARPMYSNPPVHGARIVANVVGNPALFDEWKA--EMEMMAGRIKNVRQKLFDSLSAKDK-  343 (410)
Q Consensus       275 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~g-  343 (410)
                      ++++++......        .......+++...+.++...|+..      .+  .+++.+++++++++++.+.|+ +++ 
T Consensus       212 ~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~  284 (362)
T 2c0r_A          212 DLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWI------EERGGLEGVQQANRKKASLIYDAID-QSGG  284 (362)
T ss_dssp             GGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHH------HHTTHHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred             HHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHH------HHhCCHHHHHHHHHHHHHHHHHHHH-HcCC
Confidence            654433210000        011122345555555555444321      12  357888999999999999998 876 


Q ss_pred             CCCCccccc---CCcceeeecCC----CH-HHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          344 SGKDWSFIL---RQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       344 ~~~~~~~~~---~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      +   +....   ..++.++++.+    +. ++++.| ++.||.+.++    +  |||++. .++++++++++.|++++++
T Consensus       285 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~  360 (362)
T 2c0r_A          285 F---YRGCVDVDSRSDMNITFRLASEELEKEFVKAS-EQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS  360 (362)
T ss_dssp             S---SEESSCGGGBCSSEEEEECSCHHHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             c---cccCCChHHcCCcEEEEEcCCcchHHHHHHHH-HHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            2   12211   12233344433    12 334454 5579988775    2  999874 3789999999999998765


Q ss_pred             c
Q 015283          409 V  409 (410)
Q Consensus       409 ~  409 (410)
                      .
T Consensus       361 ~  361 (362)
T 2c0r_A          361 R  361 (362)
T ss_dssp             H
T ss_pred             c
Confidence            3

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.92  E-value=3.7e-25  Score=208.49  Aligned_cols=308  Identities=13%  Similarity=0.063  Sum_probs=195.8

Q ss_pred             ccccHHHHHHHHHhhccC---CCccCcC---Cc----ccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh-hhHHHHHH
Q 015283           51 PYVLDVVKKAENLMLERG---ENKEYLP---IE----GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG-TGSLRLAA  119 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~---~~~~y~~---~~----g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg-t~a~~~~~  119 (410)
                      +++|+.+++++.+.+...   ....|..   ..    ...++++.+++++.    .. ++++|++  ++|+ ++++.++ 
T Consensus        12 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g----~~-~~~~v~~--~~g~gt~al~~~-   83 (360)
T 1w23_A           12 SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ----IP-NDYQILF--LQGGASLQFTML-   83 (360)
T ss_dssp             CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT----CC-TTEEEEE--ESSHHHHHHHHH-
T ss_pred             cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEE--ECCcchHHHHHH-
Confidence            345799999998877431   0112211   12    34567777777753    22 2468888  8888 9999987 


Q ss_pred             HHHHHhCC---CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHH-HHhcCCCCcEEEEeCCCCCCCCC
Q 015283          120 ALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA-DIKAAPGGSFILLHGCAHNPTGI  195 (410)
Q Consensus       120 ~~~~~~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~~~~~~ii~~~p~NPtG~  195 (410)
                       +.+.+.+   ||.|+++.++|... ..++..| +++.+++.+++ +.+|++++++ .+++   +++++++++|+||||.
T Consensus        84 -~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~-~~~d~~~l~~~~i~~---~~k~v~~~~~~nptG~  156 (360)
T 1w23_A           84 -PMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKAN-SYQSIPDFSEFQLNE---NDAYLHITSNNTIYGT  156 (360)
T ss_dssp             -HHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGG-TSCSCCCGGGCCCCT---TEEEEEEESEETTTTE
T ss_pred             -HHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeeccccc-CcCCccchHhhccCC---CCCEEEEeCCCCCcce
Confidence             3444544   56677776666543 3456789 99999884323 3378888887 6643   6788888999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283          196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD  275 (410)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~  275 (410)
                      +++  ++      +++||+++|+|++|..+...   .   .+.    ..  +++++|+||.+|++|  +||+++   +++
T Consensus       157 ~~~--~i------~~~~~~~li~D~a~~~~~~~---~---~~~----~~--di~~~s~sK~~~~~G--~G~~~~---~~~  211 (360)
T 1w23_A          157 QYQ--NF------PEINHAPLIADMSSDILSRP---L---KVN----QF--GMIYAGAQKNLGPSG--VTVVIV---KKD  211 (360)
T ss_dssp             ECS--SC------CCCCSSCEEEECTTTTTSSC---C---CGG----GC--SEEEEETTTTTSCTT--CEEEEE---EHH
T ss_pred             ecc--cc------cccCCceEEEechhhcCCCC---c---Ccc----cC--CEEEEEcccccCCCC--cEEEEE---cHH
Confidence            887  33      23799999999998765521   1   111    11  378999999999766  799865   566


Q ss_pred             hHHHHHHHHHhh--------ccCcccCCChhHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          276 LAARVKSQLKRL--------ARPMYSNPPVHGARIVANVVGNPALFDEWKA--EMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       276 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      +++++.......        ....+.+++..++.++...++.  +    .+  .+++.+++++++++++.+.|+ +++. 
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~--~----~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~-  283 (360)
T 1w23_A          212 LLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDW--I----KDLGGAEAIAKQNEEKAKIIYDTID-ESNG-  283 (360)
T ss_dssp             HHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH--H----HHTTHHHHHHHHHHHHHHHHHHHHH-TTTT-
T ss_pred             HHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHH--H----HHhcCHHHHHHHHHHHHHHHHHHHH-HccC-
Confidence            444332210000        0111223444443444333321  1    11  356788899999999999998 7751 


Q ss_pred             CCcccc-cC--CcceeeecCCC-----HHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          346 KDWSFI-LR--QIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       346 ~~~~~~-~~--~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                       .+... .+  .+++++|+.+.     .++.+++ .++||.+.++    +  ||+++. .+++++++++++|++++++
T Consensus       284 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~  359 (360)
T 1w23_A          284 -FYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKA-KEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             -SSEESSCGGGBCSSEEEEECSSHHHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             -cccccCCchhccCcEEEEEcCCCccHHHHHHHH-HHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence             11221 12  34556776552     2234454 4479999886    2  999874 3889999999999998765

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.92  E-value=2.6e-24  Score=203.45  Aligned_cols=304  Identities=16%  Similarity=0.119  Sum_probs=198.5

Q ss_pred             cccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCE
Q 015283           52 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK  130 (410)
Q Consensus        52 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~  130 (410)
                      ++++.+.+++.+.+...   .|.+..+..++++++++++..        +++++  ++|||+|+..+  +... +.+||+
T Consensus        13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~sGt~al~~a--l~~~~~~~gd~   77 (367)
T 3nyt_A           13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVGA--------KYCIS--CANGTDALQIV--QMALGVGPGDE   77 (367)
T ss_dssp             HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHTTCCTTCE
T ss_pred             ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHhCCCCcCE
Confidence            34688888888877553   455677899999999999733        36777  89999999987  3333 569999


Q ss_pred             EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 015283          131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ  210 (410)
Q Consensus       131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~  210 (410)
                      |+++.|+|..+...+...|.+++.++.. .+++.+|++.+++.+.+   ++++++   |+||||.   ..++++|.++|+
T Consensus        78 Vi~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~~~~G~---~~~~~~i~~la~  147 (367)
T 3nyt_A           78 VITPGFTYVATAETVALLGAKPVYVDID-PRTYNLDPQLLEAAITP---RTKAII---PVSLYGQ---CADFDAINAIAS  147 (367)
T ss_dssp             EEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCGGGTGGGCCT---TEEEEC---CBCGGGC---CCCHHHHHHHHH
T ss_pred             EEECCCccHHHHHHHHHcCCEEEEEecC-CccCCcCHHHHHHhcCc---CCcEEE---eeCCccC---hhhHHHHHHHHH
Confidence            9999999999999999999999999883 34578999999998864   677666   8899997   455777888899


Q ss_pred             HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283          211 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA  288 (410)
Q Consensus       211 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~  288 (410)
                      ++|+++|+|++|.....  .+....     . .. .++++.||  +|.++.+|. .|++  +++++++.+++........
T Consensus       148 ~~~~~li~D~a~~~g~~--~~~~~~-----~-~~-~di~~~Sf~~~K~l~~~g~-gg~~--~~~~~~l~~~~~~~~~~g~  215 (367)
T 3nyt_A          148 KYGIPVIEDAAQSFGAS--YKGKRS-----C-NL-STVACTSFFPSAPLGCYGD-GGAI--FTNDDELATAIRQIARHGQ  215 (367)
T ss_dssp             HTTCCBEEECTTTTTCE--ETTEET-----T-SS-SSEEEEECCTTSSSCCSSC-CEEE--EESCHHHHHHHHHHTBTTE
T ss_pred             HcCCEEEEECccccCCe--ECCeec-----c-CC-CCEEEEECCCCCcCCCcCc-eeEE--EeCCHHHHHHHHHHHhcCC
Confidence            99999999999864331  111111     1 11 15778887  899986676 6776  5566776555544221100


Q ss_pred             c--------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC--ccee
Q 015283          289 R--------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ--IGMF  358 (410)
Q Consensus       289 ~--------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~--~~~~  358 (410)
                      .        ......+.+.+.++...++          .+++..++.+++.+++.+.|+ +++..  +......  ..++
T Consensus       216 ~~~~~~~~~g~~~~~~~~~aa~~~~~l~----------~~~~~~~~~~~~~~~~~~~L~-~~~~~--~~~~~~~~~~~~~  282 (367)
T 3nyt_A          216 DRRYHHIRVGVNSRLDTLQAAILLPKLE----------IFEEEIALRQKVAAEYDLSLK-QVGIG--TPFIEVNNISVYA  282 (367)
T ss_dssp             EETTEECSCCCBCCCCHHHHHHHHHHHH----------THHHHHHHHHHHHHHHHHHHH-HTTCC--CCCCCTTEECCCS
T ss_pred             CcCceeeccCcCCCccHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhc-cCCee--ccCCCCCCceeeE
Confidence            0        0112233433333333322          123455566667778888887 77531  1111111  1111


Q ss_pred             -eecCC-CHHHHHHhhhcCcEEEcCCC----------------------------eEEec-CCCcccHHHHHHHHHHH
Q 015283          359 -SFTGL-NKAQSDNMTNKWHVYMTKDG----------------------------RISLA-GLSLAKCEYLADAIIDS  405 (410)
Q Consensus       359 -~~~~~-~~~~~~~ll~~~gi~v~~~g----------------------------Ris~~-~~~~~~i~~~~~~l~~~  405 (410)
                       ..+.. +.+.+.+.|+++||.+.++.                            |+++. .+|++|++++++.|++-
T Consensus       283 ~~~~~~~~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          283 QYTVRMDNRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             SEEEECSSHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             EEEEEeCCHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence             11222 45554444455699775320                            55544 36899999999998753

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.92  E-value=8.5e-24  Score=206.26  Aligned_cols=297  Identities=15%  Similarity=0.058  Sum_probs=190.3

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC---EEEEcCCCCcchhh----hhhhCCCC
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA---KVLISSPTWGNHKN----IFNDARVP  151 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd---~Vl~~~p~y~~~~~----~~~~~g~~  151 (410)
                      ..++++.+++++...      +++|++  ++|+|++++++.  ...+.+||   +|+++.|+|++...    .++..|.+
T Consensus       113 ~~~l~~~la~~~g~~------~~~v~~--t~g~t~al~~~~--~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~  182 (465)
T 3e9k_A          113 DESIVGLMKDIVGAN------EKEIAL--MNALTVNLHLLM--LSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLN  182 (465)
T ss_dssp             THHHHGGGHHHHTCC------GGGEEE--CSCHHHHHHHHH--HHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHcCCC------cCCEEE--ECCHHHHHHHHH--HHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCc
Confidence            356888888875332      688999  999999999973  33355554   59999999988544    56678988


Q ss_pred             ccc--eeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283          152 WSE--YRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG  228 (410)
Q Consensus       152 ~~~--v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~  228 (410)
                      +..  ++..+ ++++.+|++++++.+.++.++++++++++|+||||.+.+   +++|.++|++||+++|+|++|......
T Consensus       183 ~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~  259 (465)
T 3e9k_A          183 IEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVE  259 (465)
T ss_dssp             HHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC
T ss_pred             ceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcC
Confidence            754  22211 345778999999999743236888889999999999887   567777899999999999997643321


Q ss_pred             CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHh---------hc-----------
Q 015283          229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR---------LA-----------  288 (410)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~---------~~-----------  288 (410)
                         .   .+.    ..+.+++++|++|.++....++|++++   +++..+.+...+..         ..           
T Consensus       260 ---~---~~~----~~~~D~~~~s~~K~l~~gp~~~g~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  326 (465)
T 3e9k_A          260 ---L---YLH----DWGVDFACWCSYKYLNAGAGGIAGAFI---HEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGV  326 (465)
T ss_dssp             ---C---CHH----HHTCCEEEECSSSTTCCCTTCCCEEEE---CGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSG
T ss_pred             ---C---chh----hcCCCEEEECcccccccCCCceEEEEE---cHHHHhhcCCcccCccCCCCCcccccCCCcCcCCCh
Confidence               1   111    123568889999999322236799865   66654433211100         00           


Q ss_pred             -cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-------CCCcccccCC----cc
Q 015283          289 -RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-------GKDWSFILRQ----IG  356 (410)
Q Consensus       289 -~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~-------~~~~~~~~~~----~~  356 (410)
                       +...++++..+..++...+..   ..  ...+++.+++.+++++++.+.|+ +.-.       ...+++..+.    .+
T Consensus       327 ~~~~~gt~~~~~~~a~~aal~~---~~--~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~g~~~~~p~~~~~~g  400 (465)
T 3e9k_A          327 CGFRISNPPILLVCSLHASLEI---FK--QATMKALRKKSVLLTGYLEYLIK-HNYGKDKAATKKPVVNIITPSHVEERG  400 (465)
T ss_dssp             GGGCCSCCCHHHHHHHHHHHHH---HH--HHCHHHHHHHHHHHHHHHHHHHH-HHCC---------CEEECSCSSGGGBC
T ss_pred             HHhccCCccHHHHHHHHHHHHH---HH--HcCHHHHHHHHHHHHHHHHHHHH-hhccccccccCCCCeEEeCCCCHhhcc
Confidence             000113333333333322221   11  11257888889999999999888 6300       0014444443    24


Q ss_pred             eeeecCC--C-HHHHHHhhhcCcEEEcCC--C--eEEe--cCCCcccHHHHHHHHHHHhhh
Q 015283          357 MFSFTGL--N-KAQSDNMTNKWHVYMTKD--G--RISL--AGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       357 ~~~~~~~--~-~~~~~~ll~~~gi~v~~~--g--Ris~--~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .++++.+  + .++.+.|.+ +||.+...  +  ||++  ...++++++++++.|++++++
T Consensus       401 ~~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~  460 (465)
T 3e9k_A          401 CQLTITFSVPNKDVFQELEK-RGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS  460 (465)
T ss_dssp             SCEEEEECCTTCCHHHHHHT-TTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred             cEEEEEecCCHHHHHHHHHH-CCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence            4544432  2 345566655 59988643  2  9987  335899999999999999875

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.92  E-value=6e-24  Score=206.14  Aligned_cols=326  Identities=16%  Similarity=0.126  Sum_probs=199.2

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCC---cccHHHH--HHHH-HHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI---EGLAAFN--KVTA-ELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~lr--~aia-~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      ..|+|..+..      + ++|.+.+++.+.+.......|+..   .|....+  ++++ +++...++..  . ..++  +
T Consensus        46 ~~i~l~~~~~------~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~--~-~~v~--~  113 (447)
T 3h7f_A           46 DTLEMIASEN------F-VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE--F-ANVQ--P  113 (447)
T ss_dssp             HSEECCTTCC------C-CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS--E-EECC--C
T ss_pred             CceeEecCCC------C-CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCC--c-eEEE--e
Confidence            4677764432      2 379999998877643322334321   2333333  3333 3333333321  2 2222  5


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh---hhhCCCC--ccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARVP--WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~---~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      ++|++++..+  +...+.+||+|++++|+|.++...   +...|..  ++.+++. .+++.+|++++++.+.+.  ++++
T Consensus       114 ~sGs~a~~~a--~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~--~~~~  188 (447)
T 3h7f_A          114 HSGAQANAAV--LHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVD-PATHLIDMDAVRATALEF--RPKV  188 (447)
T ss_dssp             SSHHHHHHHH--HHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCC-TTTCSCCHHHHHHHHHHH--CCSE
T ss_pred             CCHHHHHHHH--HHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcC-cccCCcCHHHHHHHHHhc--CCeE
Confidence            7788888887  344477999999999999873221   1222333  3334432 345779999999998642  3456


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      +++++|+||++.     ++++|.++|++||+++|+||+|. ++.+.+....  .+    .  ...+++.|+||.++  |+
T Consensus       189 i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~--~~----~--~~di~~~s~sK~l~--G~  253 (447)
T 3h7f_A          189 IIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS--PV----P--HADVVSTTVHKTLG--GG  253 (447)
T ss_dssp             EEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC--ST----T--TCSEEEEESSGGGC--CC
T ss_pred             EEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC--CC----C--CCcEEEecCCcCCC--CC
Confidence            666889999987     78899999999999999999964 2222111010  00    1  23477999999874  89


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      |.||++.   ++++++.+......   ...++++...+.++...+... .    .+.+++.++++.++++++.+.|. +.
T Consensus       254 ~gG~i~~---~~~~~~~l~~~~~~---~~~~~~~~~~~~a~~~a~~~~-~----~~~~~~~~~~~~~~~~~l~~~L~-~~  321 (447)
T 3h7f_A          254 RSGLIVG---KQQYAKAINSAVFP---GQQGGPLMHVIAGKAVALKIA-A----TPEFADRQRRTLSGARIIADRLM-AP  321 (447)
T ss_dssp             SCEEEEE---CGGGHHHHHHHHTT---TTCSSCCHHHHHHHHHHHHHT-T----SHHHHHHHHHHHHHHHHHHHHHT-SH
T ss_pred             CeEEEEE---CHHHHHHHhhhcCC---cccCCccHHHHHHHHHHHHHh-h----CHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence            9999755   77766665443221   122233332222222222110 0    11245778888889999999998 77


Q ss_pred             -----CCCCCccccc-CCcceeeecC-----CCHHHHHHhhhcCcEEEc----CC---------C-eEEecC-----CCc
Q 015283          343 -----KSGKDWSFIL-RQIGMFSFTG-----LNKAQSDNMTNKWHVYMT----KD---------G-RISLAG-----LSL  392 (410)
Q Consensus       343 -----g~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~----~~---------g-Ris~~~-----~~~  392 (410)
                           |+    .... +..++++|+.     ++.+.+.+++++.||.+.    |+         + ||+...     +++
T Consensus       322 ~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~  397 (447)
T 3h7f_A          322 DVAKAGV----SVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGD  397 (447)
T ss_dssp             HHHHTTC----EEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCH
T ss_pred             cccCCCe----EEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCH
Confidence                 63    4332 3345565553     356777788887899988    43         1 887542     578


Q ss_pred             ccHHHHHHHHHHHhhh
Q 015283          393 AKCEYLADAIIDSYHN  408 (410)
Q Consensus       393 ~~i~~~~~~l~~~l~~  408 (410)
                      ++++++++.|++++..
T Consensus       398 eei~~~~~~l~~~l~~  413 (447)
T 3h7f_A          398 TEFTEVADIIATALAT  413 (447)
T ss_dssp             HHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999998864

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.91  E-value=1.6e-23  Score=199.91  Aligned_cols=307  Identities=14%  Similarity=0.047  Sum_probs=193.4

Q ss_pred             cccccHHHHHHHHHhhccCCCccCcCCcc--cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hC
Q 015283           50 QPYVLDVVKKAENLMLERGENKEYLPIEG--LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YF  126 (410)
Q Consensus        50 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g--~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~  126 (410)
                      .|.+++.+++++.+.+..    .|.+..|  ..++|+++++++..        +++++  ++||++++.++.  ... +.
T Consensus         7 ~p~~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~~~~--~~l~~~   70 (394)
T 1o69_A            7 PPHMGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSKS--------ENALA--LNSATAALHLAL--RVAGVK   70 (394)
T ss_dssp             -----CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHCC--------SEEEE--ESCHHHHHHHHH--HHTTCC
T ss_pred             CCCCCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHHH--HHcCCC
Confidence            344568888888877644    2555557  89999999999732        57888  999999999983  333 56


Q ss_pred             CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      +||+|+++.|+|..+...+...|++++.+++.  +++.+|++.+++.+++.+.++++++++   ||||.   ..++++|.
T Consensus        71 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~---~~~G~---~~~l~~i~  142 (394)
T 1o69_A           71 QDDIVLASSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILT---HLYGN---AAKMDEIV  142 (394)
T ss_dssp             TTCEEEEESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEE---CGGGC---CCCHHHHH
T ss_pred             CCCEEEECCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEE---CCCCC---hhhHHHHH
Confidence            99999999999999999999999999999883  567899999999987532134555543   48996   56788888


Q ss_pred             HHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          207 DVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      ++|+++|+++|+|++|. ++.+.+  ..   .   ....+  +.+.|+||..+++|.|+||+  +++++++++++.....
T Consensus       143 ~l~~~~~~~li~Dea~~~g~~~~~--~~---~---~~~~~--~~~~s~s~~K~l~~~~~G~~--~~~~~~l~~~l~~~~~  210 (394)
T 1o69_A          143 EICKENDIVLIEDAAEALGSFYKN--KA---L---GTFGE--FGVYSYNGNKIITTSGGGML--IGKNKEKIEKARFYST  210 (394)
T ss_dssp             HHHHHTTCEEEEECTTCTTCEETT--EE---T---TSSSS--EEEEECCTTSSSCCSSCEEE--EESCHHHHHHHHHHTB
T ss_pred             HHHHHcCCEEEEECcCcccceeCC--cc---c---ccccC--cEEEEEeCCccCCCCCceEE--EECCHHHHHHHHHHHH
Confidence            88999999999999988 444321  10   0   01112  34455543334456789998  4445676666554311


Q ss_pred             hhccC--ccc--------CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC--
Q 015283          286 RLARP--MYS--------NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR--  353 (410)
Q Consensus       286 ~~~~~--~~~--------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~--  353 (410)
                      .....  .+.        ..+.+...++...++          .+++..++.+++++++.+.|+ ++ +    ++..+  
T Consensus       211 ~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~----------~l~~~~~~~~~~~~~l~~~L~-~~-~----~~~~~~~  274 (394)
T 1o69_A          211 QARENCLHYEHLDYGYNYRLSNVLGAIGVAQME----------VLEQRVLKKREIYEWYKEFLG-EY-F----SFLDELE  274 (394)
T ss_dssp             TCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHT----------THHHHHHHHHHHHHHHHHHHT-TT-E----ECCCCCT
T ss_pred             hccccCccccccccCcccCcCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhc-cc-c----cccCCCC
Confidence            11000  000        022222222222222          124566778888888888887 64 2    22221  


Q ss_pred             --Ccce-eeec--C-----------------------CCHHHHHHhhhcCcEEEcCCC----------------------
Q 015283          354 --QIGM-FSFT--G-----------------------LNKAQSDNMTNKWHVYMTKDG----------------------  383 (410)
Q Consensus       354 --~~~~-~~~~--~-----------------------~~~~~~~~ll~~~gi~v~~~g----------------------  383 (410)
                        ..++ +.++  +                       .+.+.+.+.|.++||.+.++.                      
T Consensus       275 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~  354 (394)
T 1o69_A          275 NSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSEL  354 (394)
T ss_dssp             TEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHH
T ss_pred             CCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHH
Confidence              1222 1222  2                       123334444455799988761                      


Q ss_pred             -------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          384 -------RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       384 -------Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                             |.+....|++|++++++.|++++..
T Consensus       355 ~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~  386 (394)
T 1o69_A          355 FFQKGICLPSGTAMSKDDVYEISKLILKSIKA  386 (394)
T ss_dssp             HHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred             HhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence                   1122225899999999999998753

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.91  E-value=4.2e-24  Score=202.44  Aligned_cols=305  Identities=14%  Similarity=0.059  Sum_probs=199.0

Q ss_pred             cccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCE
Q 015283           52 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK  130 (410)
Q Consensus        52 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~  130 (410)
                      .+++.+.+++.+.+...   .|.+..+..++|+++++++..        +++++  ++|||+|+..+  +... +.+||+
T Consensus        14 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~sgt~al~~~--l~~l~~~~gd~   78 (373)
T 3frk_A           14 EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCNV--------NYCIG--CGNGLDALHLI--LKGYDIGFGDE   78 (373)
T ss_dssp             HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHTS--------SEEEE--ESCHHHHHHHH--HHHTTCCTTCE
T ss_pred             CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHcCCCCcCE
Confidence            34688888888777553   366778899999999999733        36777  89999999987  3344 569999


Q ss_pred             EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 015283          131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ  210 (410)
Q Consensus       131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~  210 (410)
                      |+++.|+|..+...++..|++++.++.. .+++.+|++++++.+++   ++++++   |+||||...   ++++|.++|+
T Consensus        79 Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~l~~---~~~~v~---~~n~~G~~~---~l~~i~~l~~  148 (373)
T 3frk_A           79 VIVPSNTFIATALAVSYTGAKPIFVEPD-IRTYNIDPSLIESAITE---KTKAII---AVHLYGQPA---DMDEIKRIAK  148 (373)
T ss_dssp             EEEETTSCTHHHHHHHHHSCEEEEECEE-TTTTEECGGGTGGGCCT---TEEEEE---EECCTTCCC---CHHHHHHHHH
T ss_pred             EEECCCCcHHHHHHHHHcCCEEEEEecc-ccccCcCHHHHHHhcCC---CCeEEE---EECCCcCcc---cHHHHHHHHH
Confidence            9999999999999999999999999984 35688999999988865   666666   789999954   4667888899


Q ss_pred             HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283          211 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA  288 (410)
Q Consensus       211 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~  288 (410)
                      ++|+++|+|++|.....  .+...+.      .. .++.+.|||  |.++.+|. .|++  +++++++.+++........
T Consensus       149 ~~~~~li~D~a~~~g~~--~~~~~~~------~~-~d~~~~S~~~~K~l~~~g~-gg~~--~~~~~~~~~~~~~~~~~g~  216 (373)
T 3frk_A          149 KYNLKLIEDAAQAHGSL--YKGMKVG------SL-GDAAGFSFYPAKNLGSLGD-GGAV--VTNDKDLAEKIKALSNYGS  216 (373)
T ss_dssp             HHTCEEEEECTTCTTCE--ETTEETT------SS-SSEEEEECCTTSSSCCSSS-CEEE--EESCHHHHHHHHHHHBTTC
T ss_pred             HcCCEEEEECCcccCCE--ECCEecc------cc-ccEEEEeCcCCCccCccce-eEEE--EeCCHHHHHHHHHHHhcCc
Confidence            99999999999875432  1111111      11 247788877  88874354 5776  4556666555544322111


Q ss_pred             c-----C---cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc-CCcce--
Q 015283          289 R-----P---MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-RQIGM--  357 (410)
Q Consensus       289 ~-----~---~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~--  357 (410)
                      .     .   .....+.+.+.++...+          +.+++..++.+++.+++.+.|+ +++    +.+.. +....  
T Consensus       217 ~~~~~~~~~g~~~~~~~~~aa~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~-~~~----~~~~~~~~~~~~~  281 (373)
T 3frk_A          217 EKKYHHIYKGFNSRLDELQAGFLRVKL----------KYLDKWNEERRKIAQKYIAGIN-NPN----VIIPVEADYAKHV  281 (373)
T ss_dssp             SBTTBCCSCCCBCCCCHHHHHHHHHHH----------HTHHHHHHHHHHHHHHHHHHCC-CTT----EECCCCCTTEECC
T ss_pred             ccCCccccccccCCCCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHhc-cCc----eEeccCCCCCcee
Confidence            0     0   00112232222222111          2234566777778888888887 665    22211 11111  


Q ss_pred             -eee--cCCCHHHHHHhhhcCcEEEcCC-----------------------------C--eEEecC-CCcccHHHHHHHH
Q 015283          358 -FSF--TGLNKAQSDNMTNKWHVYMTKD-----------------------------G--RISLAG-LSLAKCEYLADAI  402 (410)
Q Consensus       358 -~~~--~~~~~~~~~~ll~~~gi~v~~~-----------------------------g--Ris~~~-~~~~~i~~~~~~l  402 (410)
                       +.+  ...+.+.+.+.|+++||.+.++                             +  |+++.. +|++|++++++.|
T Consensus       282 ~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l  361 (373)
T 3frk_A          282 WYTFVIRSEKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKI  361 (373)
T ss_dssp             CSSEEEEESSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred             eEEEEEEeCCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHH
Confidence             111  1124555444445569988632                             1  666553 5999999999999


Q ss_pred             HHHhhh
Q 015283          403 IDSYHN  408 (410)
Q Consensus       403 ~~~l~~  408 (410)
                      ++...+
T Consensus       362 ~~~~~~  367 (373)
T 3frk_A          362 NAWKLE  367 (373)
T ss_dssp             HTCC--
T ss_pred             HHHhhh
Confidence            987644

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.91  E-value=9e-23  Score=194.25  Aligned_cols=276  Identities=14%  Similarity=0.072  Sum_probs=183.7

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~  150 (410)
                      +.....++++.+++++..       + +.++  +++|++++..+.  ...+.+||+|+++.|+|.++...    ++..|.
T Consensus        57 ~~~~~~~l~~~la~~~g~-------~-~~i~--~~sG~~ai~~~~--~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~  124 (389)
T 3acz_A           57 GNPTVEQFEEMVCSIEGA-------A-GSAA--FGSGMGAISSST--LAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGI  124 (389)
T ss_dssp             CCHHHHHHHHHHHHHHTC-------S-EEEE--ESSHHHHHHHHH--TTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTC
T ss_pred             CChHHHHHHHHHHHHhCC-------C-eEEE--eCCHHHHHHHHH--HHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCC
Confidence            455678999999999632       2 4445  577889998873  33367999999999999987655    567898


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      +++.++.       .|++.+++.+++   +++++++++|+||||.+.+   +++|.++|+++|+++|+|++|..+...  
T Consensus       125 ~~~~v~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~--  189 (389)
T 3acz_A          125 EVDLIDT-------SDVEKVKAAWKP---NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL--  189 (389)
T ss_dssp             EEEEECT-------TCHHHHHHTCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC--
T ss_pred             EEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc--
Confidence            8888875       378999888865   6788888999999999886   678888899999999999999876532  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCc-hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~  308 (410)
                        .  ++     ..+.++++.|+||.++.+|.|+ ||+++   ++ ++++++......    .....+...+.++...++
T Consensus       190 --~--~~-----~~~~di~~~S~sK~~~~~~~~~~G~v~~---~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~l~  253 (389)
T 3acz_A          190 --K--PL-----ELGADIALHSVSKYINGHGDVIGGVSSA---KTAEDIATIKFYRKD----AGSLMAPMDAFLCARGMK  253 (389)
T ss_dssp             --C--GG-----GTTCSEEEEETTTTTTCSSCCCCEEEEE---SSHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHT
T ss_pred             --C--cc-----ccCCeEEEECChhhccCCCCceeEEEEE---CcHHHHHHHHHHHHh----cCCCCCHHHHHHHHcCcc
Confidence              1  11     1246789999999999999998 98744   56 766666543321    112344445555555555


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC------CC-----Cccccc----CCcceeeecCC-CHHHHHHhh
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS------GK-----DWSFIL----RQIGMFSFTGL-NKAQSDNMT  372 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~------~~-----~~~~~~----~~~~~~~~~~~-~~~~~~~ll  372 (410)
                      ..          ....++..++...+.+.++ +.+.      +.     .+.+..    ..++++.+ .+ ..+.+.+++
T Consensus       254 ~l----------~~r~~~~~~~~~~l~~~l~-~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~-~l~~~~~~~~~l  321 (389)
T 3acz_A          254 TL----------PIRMQIHMENGLKVAKFLE-QHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLF-EMKSFEAAKKLM  321 (389)
T ss_dssp             TH----------HHHHHHHHHHHHHHHHHHH-HCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE-EESSHHHHHHHH
T ss_pred             HH----------HHHHHHHHHHHHHHHHHHH-cCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEE-EECCHHHHHHHH
Confidence            32          1222333334444445444 3310      00     011111    12343332 22 255667777


Q ss_pred             hcCcEEEcC---C-----------------------------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          373 NKWHVYMTK---D-----------------------------G--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       373 ~~~gi~v~~---~-----------------------------g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++.|+.+.+   |                             +  |+|++.   ++.+++++.|.++++.
T Consensus       322 ~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~~  388 (389)
T 3acz_A          322 EHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALEL  388 (389)
T ss_dssp             TTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHTC
T ss_pred             HhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence            767776544   2                             2  888754   6899999999999865

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.91  E-value=1.2e-22  Score=193.28  Aligned_cols=215  Identities=14%  Similarity=0.089  Sum_probs=150.7

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~  150 (410)
                      +..+..++++++++++..       ++.+++   .+|++++..+...  .+.+||+|+++.|+|.+....    ++..|.
T Consensus        50 ~~~~~~~l~~~la~~~~~-------~~~i~~---~sGt~a~~~~~~~--~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~  117 (386)
T 1cs1_A           50 GNPTRDVVQRALAELEGG-------AGAVLT---NTGMSAIHLVTTV--FLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY  117 (386)
T ss_dssp             CCHHHHHHHHHHHHHHTC-------SEEEEE---SSHHHHHHHHHHH--HCCTTCEEEEETTCCHHHHHHHHHHHTTTSC
T ss_pred             CCccHHHHHHHHHHHhCC-------CcEEEe---CCHHHHHHHHHHH--HhCCCCEEEEecCCcHhHHHHHHHHHHhcCC
Confidence            556788999999999743       245655   5559999988433  367999999999999874443    356788


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      +++.++.       .|++.+++.+++   +++++++++|+||||.+.+   +++|.++|+++|+++|+||+|..+.... 
T Consensus       118 ~~~~~~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-  183 (386)
T 1cs1_A          118 RVLFVDQ-------GDEQALRAALAE---KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN-  183 (386)
T ss_dssp             EEEEECT-------TCHHHHHHHHHT---CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred             EEEEeCC-------CCHHHHHHhhcc---CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence            8877765       278999999875   5667777999999999885   6788888999999999999998876431 


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                           .+     ..+.++++.|+||.++.+|.|+ ||+++  +++++++++......    .....+..++.++...++.
T Consensus       184 -----~~-----~~~~di~~~s~sK~~~~~~~~~~G~~~~--~~~~l~~~l~~~~~~----~~~~~~~~~~~~~~~~l~~  247 (386)
T 1cs1_A          184 -----PL-----ALGADLVLHSCTKYLNGHSDVVAGVVIA--KDPDVVTELAWWANN----IGVTGGAFDSYLLLRGLRT  247 (386)
T ss_dssp             -----GG-----GGTCSEEEEETTTTTTCSSCCCCEEEEE--SSHHHHHHHHHHHHH----HTCBCCHHHHHHHHHHHTT
T ss_pred             -----cc-----ccCceEEEEcCcccccCCCCceeEEEEe--CcHHHHHHHHHHHHh----cCCCCCHHHHHHHHhcccH
Confidence                 11     1246789999999999899987 88743  344766666543321    1123445554544444432


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                                +....+...++.+.+.+.++ ++
T Consensus       248 ----------~~~~~~~~~~~~~~l~~~l~-~~  269 (386)
T 1cs1_A          248 ----------LVPRMELAQRNAQAIVKYLQ-TQ  269 (386)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHh-cC
Confidence                      12334455566666667666 54

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.91  E-value=1.8e-23  Score=201.45  Aligned_cols=323  Identities=15%  Similarity=0.145  Sum_probs=185.1

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-----CCccc----HHH-HHHHHHHhcCCCCCcccCCceE
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-----PIEGL----AAF-NKVTAELLFGADNSVLKEQRVA  104 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-----~~~g~----~~l-r~aia~~~~~~~~~~~~~~~i~  104 (410)
                      +.++|..+..      + .++.+.+++.+.+.......|+     +....    .++ ++.+++++...      . ..+
T Consensus        33 ~~i~l~~~~~------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~-~~v   98 (425)
T 3ecd_A           33 SQVELIASEN------I-VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAG------H-ANV   98 (425)
T ss_dssp             HSEECCTTCC------C-CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCS------E-EEC
T ss_pred             cceeeecccC------C-CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCC------C-cee
Confidence            4577765543      2 2799999998877432111221     11111    111 23344443211      2 223


Q ss_pred             EEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc---hhhhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCCC
Q 015283          105 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN---HKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       105 ~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~  180 (410)
                      +  ++||++++..+..  ..+.+||+|++++|+|..   +.......|..+..+++. +.+++.+|++.+++.+.+  ++
T Consensus        99 ~--~~~Gs~a~~~al~--~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~--~~  172 (425)
T 3ecd_A           99 Q--PHSGAQANGAVML--ALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQ--HK  172 (425)
T ss_dssp             C--CSSHHHHHHHHHH--HHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHH--HC
T ss_pred             e--cCchHHHHHHHHH--HccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhh--cC
Confidence            4  6889999988743  347799999999999987   222222455544444332 234578999999999974  24


Q ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      ++++++++|+||+     ..++++|.++|++||++||+||+|. ++.+.+....  .    ...  .++++.|+||.+  
T Consensus       173 ~~~v~~~~~~~~~-----~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~--~----~~~--~di~~~s~sK~l--  237 (425)
T 3ecd_A          173 PSLIIAGFSAYPR-----KLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHAN--P----VEH--AHVVTSTTHKTL--  237 (425)
T ss_dssp             CSEEEEECSCCCS-----CCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCC--G----GGT--CSEEEEESSGGG--
T ss_pred             CcEEEEccccCCC-----cCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccC--c----hhc--CcEEEecCCccc--
Confidence            5566667899975     3467899999999999999999953 2222111000  1    111  348899999987  


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL  338 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  338 (410)
                      +|+|+||++  ++++++.+.+...    ....+. +++...+.++...+...     ..+++++.+++++++++++.+.|
T Consensus       238 ~g~~~g~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~l~~~L  306 (425)
T 3ecd_A          238 RGPRGGFVL--TNDEEIAKKINSA----VFPGLQGGPLMHVIAGKAVAFGEA-----LTDDFKTYIDRVLANAQALGDVL  306 (425)
T ss_dssp             CCCSCEEEE--ESCHHHHHHHHHH----HC-----CCCHHHHHHHHHHHHHH-----TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEE--eCCHHHHHHHHhh----hCccccCCccHHHHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHH
Confidence            678999984  4445644444332    222111 33332222222221110     11334677888889999999999


Q ss_pred             hhccCCCCCcccccC-CcceeeecCC-----CHHHHHHhhhcCcEEEc----CC--------C--eEEecC-----CCcc
Q 015283          339 SAKDKSGKDWSFILR-QIGMFSFTGL-----NKAQSDNMTNKWHVYMT----KD--------G--RISLAG-----LSLA  393 (410)
Q Consensus       339 ~~~~g~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~ll~~~gi~v~----~~--------g--Ris~~~-----~~~~  393 (410)
                      . +.|    +.+..+ ..++++|+.+     +.+.+.+.++++||.+.    |+        +  |+++..     .+++
T Consensus       307 ~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e  381 (425)
T 3ecd_A          307 K-AGG----VDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAA  381 (425)
T ss_dssp             H-HTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHH
T ss_pred             H-hCC----CeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHH
Confidence            8 776    344433 3455666533     45666666677899998    54        1  776332     2479


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      +++++++.|++++++
T Consensus       382 ~i~~~~~~l~~~l~~  396 (425)
T 3ecd_A          382 EFREVGRLILEVFEA  396 (425)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999998865

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.91  E-value=5.2e-24  Score=206.97  Aligned_cols=322  Identities=13%  Similarity=0.049  Sum_probs=209.9

Q ss_pred             ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC---CceEEEecCChhhHHHHHHHHHHH-h---
Q 015283           53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE---QRVATVQGLSGTGSLRLAAALIER-Y---  125 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~---~~i~~~~t~ggt~a~~~~~~~~~~-~---  125 (410)
                      .++.+.+++.++++... ..|....+..++++++++++.+.+|.+.+.   ..+++  |+|||+++.++...+.. +   
T Consensus        54 ~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~--t~ggtea~~~al~a~~~~~~~~  130 (452)
T 2dgk_A           54 DDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN--TIGSSEACMLGGMAMKWRWRKR  130 (452)
T ss_dssp             CCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEE--eCCHHHHHHHHHHHHHHHHHHH
Confidence            35788999888875533 445555677888888888777666654321   13777  99999999887443321 1   


Q ss_pred             --CCC-----CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCC
Q 015283          126 --FPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT  198 (410)
Q Consensus       126 --~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~  198 (410)
                        .+|     +.|++++ +|..+...++..|++++.+++. ++++.+|++.+++.+.+   +++++++++|+||||.+. 
T Consensus       131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~tG~~~-  204 (452)
T 2dgk_A          131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR-PGQLFMDPKRMIEACDE---NTIGVVPTFGVTYTGNYE-  204 (452)
T ss_dssp             HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB-TTBCSCCHHHHHHHCCT---TEEEEECBBSCTTTCBBC-
T ss_pred             HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC-CCCCeECHHHHHHHHhh---CCEEEEEEcCCcCCcccC-
Confidence              144     5999999 9999999999999999999984 24688999999999975   678888899999999964 


Q ss_pred             HHHHHHHHHHHHHc------CCcccccccCCCCCC---CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          199 PEQWEKIADVIQEK------NHIPFFDVAYQGFAS---GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       199 ~~~l~~i~~~~~~~------~~~li~Deay~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                        ++++|+++|+++      |+++++|++|.++..   .+ .. .+.    ......+.+..|.+| ++++|+++||++ 
T Consensus       205 --~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~-~~~----~~~~~~d~~~~~~hK-~~~~~~~~G~~~-  274 (452)
T 2dgk_A          205 --FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP-DI-VWD----FRLPRVKSISASGHK-FGLAPLGCGWVI-  274 (452)
T ss_dssp             --CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT-TC-CCS----TTSTTEEEEEEETTT-TTCCCSSCEEEE-
T ss_pred             --CHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCc-cc-hhh----cCCCCCcEEEECccc-ccCCCCCeEEEE-
Confidence              566777789985      999999999987642   10 00 011    111234567788899 556889999984 


Q ss_pred             EeCCchhH-HHHHHHHHhhccC------cccCC---ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          270 VCSSSDLA-ARVKSQLKRLARP------MYSNP---PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       270 ~~~~~~~~-~~~~~~~~~~~~~------~~~~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                       +++++.. +.+.. ...+...      .....   ...++.++...+.        .+.+++..+++.++++++.+.|+
T Consensus       275 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg--------~~g~~~~~~~~~~~a~~l~~~L~  344 (452)
T 2dgk_A          275 -WRDEEALPQELVF-NVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG--------REGYTKVQNASYQVAAYLADEIA  344 (452)
T ss_dssp             -ESSGGGSCGGGCE-EECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -EcCHHHHHHHhcc-CccccCCCCCCcccCCCChhHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence             4444322 22100 0001000      00011   1222333332221        23456778888999999999998


Q ss_pred             hccCCCCCcccccC-----Ccceeee--cC-----CC-HHHHHHhhhcCcEEEc----CC---C----eEEecC-CCccc
Q 015283          340 AKDKSGKDWSFILR-----QIGMFSF--TG-----LN-KAQSDNMTNKWHVYMT----KD---G----RISLAG-LSLAK  394 (410)
Q Consensus       340 ~~~g~~~~~~~~~~-----~~~~~~~--~~-----~~-~~~~~~ll~~~gi~v~----~~---g----Ris~~~-~~~~~  394 (410)
                       +++.   +++..+     ..+++.|  .+     ++ .++.++|.+ .||.+.    |.   +    ||++.. .|+++
T Consensus       345 -~~~~---~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~  419 (452)
T 2dgk_A          345 -KLGP---YEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRL-RGWQVPAFTLGGEATDIVVMRIMCRRGFEMDF  419 (452)
T ss_dssp             -TTSS---EEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHH-TTCBCCEEECSTTCTTCEEEEEECCTTCCHHH
T ss_pred             -hCCC---eEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHh-cCCeeeeeeCCcccCCeEEEEEEecCCCCHHH
Confidence             7752   344332     3333333  12     23 445566655 588532    32   2    999875 47899


Q ss_pred             HHHHHHHHHHHhhh
Q 015283          395 CEYLADAIIDSYHN  408 (410)
Q Consensus       395 i~~~~~~l~~~l~~  408 (410)
                      ++++++.|+++++.
T Consensus       420 id~li~~l~~~~~~  433 (452)
T 2dgk_A          420 AELLLEDYKASLKY  433 (452)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988754

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.91  E-value=5.1e-24  Score=204.96  Aligned_cols=315  Identities=15%  Similarity=0.153  Sum_probs=183.4

Q ss_pred             ccHHHHHHHHHhhccCCCccC------cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283           53 VLDVVKKAENLMLERGENKEY------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      .+|.+.+++.+.+.......|      ......+.+++...+++....+.  ++++|++   .+|++++..+.  ...+.
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~v~~---~sGs~a~~~a~--~~~~~  114 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--DYANVQP---HSGSQANFAVY--TALLQ  114 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTC--SEEECCC---SSHHHHHHHHH--HHHCC
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCC--CCceeEe---cCcHHHHHHHH--HHhcC
Confidence            379999999887733221122      22222333343222332222222  2455655   55688888873  44477


Q ss_pred             CCCEEEEcCCCCcchh---hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283          127 PGAKVLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE  203 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~  203 (410)
                      +||+|++++|+|..+.   ..+...|..+..+++..++++.+|++.+++.+.+.  +++++++++|+||+  ..   +++
T Consensus       115 ~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~~~~--~~---~l~  187 (420)
T 3gbx_A          115 PGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH--KPKMIIGGFSAYSG--VV---DWA  187 (420)
T ss_dssp             TTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH--CCSEEEECCTTCCS--CC---CHH
T ss_pred             CCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc--CCeEEEEecCccCC--cc---CHH
Confidence            9999999999998743   22223343444444322456779999999999762  35666777899875  33   478


Q ss_pred             HHHHHHHHcCCcccccccCCCC-CCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc---hhHHH
Q 015283          204 KIADVIQEKNHIPFFDVAYQGF-ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS---DLAAR  279 (410)
Q Consensus       204 ~i~~~~~~~~~~li~Deay~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~---~~~~~  279 (410)
                      +|.++|++||+++|+||+|... ...+.   ...     .....+++++|+||.++  |.+.||++.   ++   ++.+.
T Consensus       188 ~l~~l~~~~~~~li~De~~~~~~~~~~~---~~~-----~~~~~di~~~s~sK~~~--g~~gg~~~~---~~~~~~~~~~  254 (420)
T 3gbx_A          188 KMREIADSIGAYLFVDMAHVAGLIAAGV---YPN-----PVPHAHVVTTTTHKTLA--GPRGGLILA---KGGDEELYKK  254 (420)
T ss_dssp             HHHHHHHHTTCEEEEECTTTHHHHHTTS---SCC-----STTTSSEEEEESSGGGC--SCSCEEEEE---SSCCHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCcchhceeccc---CCc-----ccccCCEEEeecccCCC--CCCceEEEE---cCCcHHHHHH
Confidence            8999999999999999996422 21100   000     01124588999999985  555688744   54   54444


Q ss_pred             HHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-Ccce
Q 015283          280 VKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGM  357 (410)
Q Consensus       280 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-~~~~  357 (410)
                      +..    ..... ..+++...+.++...+...     ..+++++.+++++++++++.+.|. +.|    +.+..+ ..++
T Consensus       255 ~~~----~~~~~~~~~~~~~~~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~  320 (420)
T 3gbx_A          255 LNS----AVFPSAQGGPLMHVIAGKAVALKEA-----MEPEFKVYQQQVAKNAKAMVEVFL-NRG----YKVVSGGTENH  320 (420)
T ss_dssp             HHH----HHC----CCCCHHHHHHHHHHHHHT-----TSHHHHHHHHHHHHHHHHHHHHHH-HTT----CEEGGGSCSSS
T ss_pred             hhh----hcCCCCCCCcchhHHHHHHHHHHHH-----HhHhHHHHHHHHHHHHHHHHHHHH-hcC----CeeccCCCCCe
Confidence            332    22221 2233333323322222110     012346778888999999999998 776    344432 3455


Q ss_pred             eeecC-----CCHHHHHHhhhcCcEEEcC-------C------C-eEEecC-----CCcccHHHHHHHHHHHhhh
Q 015283          358 FSFTG-----LNKAQSDNMTNKWHVYMTK-------D------G-RISLAG-----LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       358 ~~~~~-----~~~~~~~~ll~~~gi~v~~-------~------g-Ris~~~-----~~~~~i~~~~~~l~~~l~~  408 (410)
                      +.|+.     .+.+.+.++++++||.+.+       +      + ||+++.     .++++++++++.|++++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~  395 (420)
T 3gbx_A          321 LFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN  395 (420)
T ss_dssp             EEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence            66553     3556666666778999887       2      1 888753     3578999999999998865

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.91  E-value=7.7e-23  Score=195.42  Aligned_cols=248  Identities=16%  Similarity=0.099  Sum_probs=156.0

Q ss_pred             eeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283           39 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR  116 (410)
Q Consensus        39 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~  116 (410)
                      .+.+.| +....+++.+.+.+++...........|.  +.....++++.+++++..       + +.++  +.+|++++.
T Consensus        26 ~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~-------~-~~i~--~~sG~~a~~   94 (398)
T 1gc0_A           26 GALVPP-VYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGG-------E-AGLA--LASGMGAIT   94 (398)
T ss_dssp             TBSSCC-BCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTC-------S-EEEE--ESSHHHHHH
T ss_pred             CCcCCC-ccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCC-------C-cEEE--ECCHHHHHH
Confidence            445555 44455555677766654221111112232  556778999999999632       2 3444  577789999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          117 LAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       117 ~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      .++  ...+.+||+|+++.|+|.++...+    ...|.+++.++.       .|++.+++.+++   +++++++++|+||
T Consensus        95 ~~l--~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~---~~~~v~~~~~~np  162 (398)
T 1gc0_A           95 STL--WTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALEAAMTP---ATRVIYFESPANP  162 (398)
T ss_dssp             HHH--HHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-------TCHHHHHHHCCT---TEEEEEEESSCTT
T ss_pred             HHH--HHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCC
Confidence            884  333679999999999999887665    567887777765       278999998875   6788888999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEe
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVC  271 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~  271 (410)
                      ||.+.+   +++|.++|+++|+++|+|++|..+...   .   .+     ..+.++++.|+||.++.+|+|+ ||+++  
T Consensus       163 tG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~---~---~~-----~~~~d~~~~S~sK~~~~~~~~~~G~l~~--  226 (398)
T 1gc0_A          163 NMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ---R---PL-----ELGADLVVHSATKYLSGHGDITAGIVVG--  226 (398)
T ss_dssp             TCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC---C---GG-----GGTCSEEEEETTTTTTCSSSCCCEEEEE--
T ss_pred             Cccccc---HHHHHHHHHHcCCEEEEECCCcccccC---C---ch-----hhCceEEEECCccccCCCCCCeEEEEEE--
Confidence            999875   778888899999999999998755432   0   11     1246789999999999999998 88744  


Q ss_pred             CCchhHH-HHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          272 SSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       272 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                       +++.++ .+..... ..  .....+...+.++...++..          ....++..++.+.+.+.|+
T Consensus       227 -~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~l~~~L~  281 (398)
T 1gc0_A          227 -SQALVDRIRLQGLK-DM--TGAVLSPHDAALLMRGIKTL----------NLRMDRHCANAQVLAEFLA  281 (398)
T ss_dssp             -CHHHHHHHHHTHHH-HH--TCCCCCHHHHHHHHHHHTTH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             -ChHHHHHHHHHHhh-cc--CCCCCCHHHHHHHHhccchH----------HHHHHHHHHHHHHHHHHHh
Confidence             655444 3332221 10  11234455555555555432          2334445556666666665

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.91  E-value=6e-23  Score=196.19  Aligned_cols=195  Identities=12%  Similarity=0.055  Sum_probs=139.4

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFN  146 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~  146 (410)
                      .+| +..+..++++++++++..       .+.+++   .+|++++..+.  . .+.+||+|++++|+|.+...    .++
T Consensus        62 ~r~-~~p~~~~l~~~la~~~g~-------~~~i~~---~sG~~ai~~~~--~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~  127 (403)
T 3cog_A           62 SRS-GNPTRNCLEKAVAALDGA-------KYCLAF---ASGLAATVTIT--H-LLKAGDQIICMDDVYGGTNRYFRQVAS  127 (403)
T ss_dssp             -----CHHHHHHHHHHHHHHTC-------SEEEEE---SCHHHHHHHHH--T-TSCTTCEEEEESSCCHHHHHHHHHTGG
T ss_pred             cCC-CCchHHHHHHHHHHHhCC-------CcEEEE---CCHHHHHHHHH--H-HhCCCCEEEEeCCCcchHHHHHHHHHH
Confidence            345 456788999999999743       245665   55678888873  3 46799999999999987443    345


Q ss_pred             hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC-CcccccccCCCC
Q 015283          147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-HIPFFDVAYQGF  225 (410)
Q Consensus       147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~-~~li~Deay~~~  225 (410)
                      ..|.+++.++..       |++.+++.+++   +++++++++|+||||.+++   +++|+++|+++| +++|+|++|..+
T Consensus       128 ~~G~~v~~v~~~-------d~~~l~~~i~~---~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~  194 (403)
T 3cog_A          128 EFGLKISFVDCS-------KIKLLEAAITP---ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSP  194 (403)
T ss_dssp             GGTCEEEEECTT-------SHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCT
T ss_pred             HcCCEEEEECCC-------CHHHHHHhcCc---CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCccc
Confidence            778888888762       78999988874   7788888999999999886   778888899999 999999999887


Q ss_pred             CCCCCCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH
Q 015283          226 ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA  304 (410)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  304 (410)
                      .+..      ++    . .+.+++++|+||.++.+| .|+||+  +++++++++++.....    ......+...+.++.
T Consensus       195 ~~~~------~~----~-~~~div~~S~sK~~~g~~~~~~G~v--~~~~~~l~~~l~~~~~----~~g~~~~~~~~~~~~  257 (403)
T 3cog_A          195 YFQR------PL----A-LGADISMYSATKYMNGHSDVVMGLV--SVNCESLHNRLRFLQN----SLGAVPSPIDCYLCN  257 (403)
T ss_dssp             TTCC------TT----T-TTCSEEEEETTTTTTCSSCCCCEEE--EECCHHHHHHHHHHHH----HHCCCCCHHHHHHHH
T ss_pred             ccCC------cc----c-cCCeEEEEcChhhccCCCCCeEEEE--EECcHHHHHHHHHHHH----hcCCCCCHHHHHHHH
Confidence            6421      11    1 246799999999998766 478997  4445676666554332    112234555555555


Q ss_pred             HHhCC
Q 015283          305 NVVGN  309 (410)
Q Consensus       305 ~~l~~  309 (410)
                      ..++.
T Consensus       258 ~~l~~  262 (403)
T 3cog_A          258 RGLKT  262 (403)
T ss_dssp             HHHTT
T ss_pred             hhhhH
Confidence            56654

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.91  E-value=2.1e-23  Score=194.28  Aligned_cols=183  Identities=16%  Similarity=0.092  Sum_probs=132.2

Q ss_pred             HHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCcccee
Q 015283           81 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYR  156 (410)
Q Consensus        81 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~  156 (410)
                      ++++.+++++..       ++.+++   .+|++++..+..  ..+.+||+|++++|+|.++...+    +..|.+++.++
T Consensus         2 ~l~~~la~~~g~-------~~~i~~---~sG~~a~~~~~~--~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   69 (331)
T 1pff_A            2 ALEGKIAKLEHA-------EACAAT---ASGMGAIAASVW--TFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFID   69 (331)
T ss_dssp             HHHHHHHHHHTC-------SEEEEE---SSHHHHHHHHHH--HHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred             hHHHHHHHHhCC-------CeEEEe---CChHHHHHHHHH--HhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeC
Confidence            689999999632       244544   666899998743  33679999999999999887665    35788888776


Q ss_pred             eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH-cCCcccccccCCCCCCCCCCCchh
Q 015283          157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASGSLDNDAS  235 (410)
Q Consensus       157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Deay~~~~~~~~~~~~~  235 (410)
                      .       .|++.+++.+++   +++++++++|+||||.+++   +++|.++|++ +|+++|+|++|..+...   .   
T Consensus        70 ~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~---~---  130 (331)
T 1pff_A           70 M-------AVPGNIEKHLKP---NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT---N---  130 (331)
T ss_dssp             T-------TSTTHHHHTCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC---C---
T ss_pred             C-------CCHHHHHHhhcC---CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC---C---
Confidence            5       378888888864   6788888999999999886   7788888999 99999999998754321   0   


Q ss_pred             HhHHHhhcCCcEEEEecccccccccCCC-cceEEEEeCCc-hhHHHHHHHHHhhccC-cccCCChhHHHHHHHH
Q 015283          236 SVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSS-DLAARVKSQLKRLARP-MYSNPPVHGARIVANV  306 (410)
Q Consensus       236 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r-~G~l~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~  306 (410)
                      ++     ..+.++++.|+||.++.+|.| +||+++   ++ +++++    +...... .....+...+.++...
T Consensus       131 ~~-----~~~~d~~~~s~~K~~~~~~~r~~G~~~~---~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~  192 (331)
T 1pff_A          131 PL-----DLGVDIVVHSATKYINGHTDVVAGLVCS---RADIIAKV----KSQGIKDITGAIISPHDAWLITRG  192 (331)
T ss_dssp             GG-----GGTCSEEEEETTTTTSSSSSCCCEEEEE---CHHHHHHH----HHTCCCCCCCCCCCHHHHHHHHHH
T ss_pred             hh-----hcCCcEEEEECccccCCCCCceEEEEEe---CcHHHHHH----HHHHHHhhcCCCCCHHHHHHHHcC
Confidence            11     224789999999999999999 789754   55 64444    4443333 2234555555444333

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.91  E-value=6.1e-23  Score=196.45  Aligned_cols=310  Identities=15%  Similarity=0.166  Sum_probs=191.5

Q ss_pred             cHHHHHHHHHhhccCCCccC------cCCcccHHHH----HHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH
Q 015283           54 LDVVKKAENLMLERGENKEY------LPIEGLAAFN----KVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE  123 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr----~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~  123 (410)
                      ++.+.+++.+.+.......|      .......+++    +.+++++...      ++.+++   .+|++++.++...  
T Consensus        36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~------~~~i~~---~sGt~a~~~a~~~--  104 (405)
T 2vi8_A           36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAE------HANVQP---HSGAQANMAVYFT--  104 (405)
T ss_dssp             CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS------EEECCC---SSHHHHHHHHHHH--
T ss_pred             CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC------ceEEEe---cCcHHHHHHHHHH--
Confidence            79999999887742211222      1112234454    5777775321      333433   5569999988443  


Q ss_pred             HhCCCCEEEEcCCCCcchhh-h--hhhCCC--CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCC
Q 015283          124 RYFPGAKVLISSPTWGNHKN-I--FNDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT  198 (410)
Q Consensus       124 ~~~~gd~Vl~~~p~y~~~~~-~--~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~  198 (410)
                      .+.+||+|++++|+|+.+.. .  +...|.  +++.+++. ++++.+|++.+++.+.+.  +++++++ +|+|. |..  
T Consensus       105 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~--~~~~v~~-~~~~~-~~~--  177 (405)
T 2vi8_A          105 VLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVD-PETHVIDYDDVREKARLH--RPKLIVA-AAAAY-PRI--  177 (405)
T ss_dssp             HCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBC-TTTCSBCHHHHHHHHHHH--CCSEEEE-CCSSC-CSC--
T ss_pred             hcCCCCEEEEecccccchhcccchhhhccceeEEEecccc-cccCCcCHHHHHHHHHhc--CCeEEEE-eCCCC-Ccc--
Confidence            37799999999999988754 1  123343  55555542 246789999999998741  3344554 34443 342  


Q ss_pred             HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhH
Q 015283          199 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLA  277 (410)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~  277 (410)
                       .++++|.++|++||+++|+||+|...... .+.....    ..  ..+++++|+||.++ ++|   ||+++   +++++
T Consensus       178 -~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~~----~~--~~di~~~s~sK~~~g~~g---G~~~~---~~~~~  243 (405)
T 2vi8_A          178 -IDFAKFREIADEVGAYLMVDMAHIAGLVA-AGLHPNP----VP--YAHFVTTTTHKTLRGPRG---GMILC---QEQFA  243 (405)
T ss_dssp             -CCHHHHHHHHHHHTCEEEEECTTTHHHHH-TTSSCCS----TT--TCSEEEEESSSTTCCCSC---EEEEE---CHHHH
T ss_pred             -CCHHHHHHHHHHcCCEEEEEccccccccc-cCcCCCc----cc--cCCEEEEeccccCCCCCC---eEEEE---cHHHH
Confidence             34788899999999999999998732111 0111111    11  23488999999997 555   99754   67766


Q ss_pred             HHHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-Cc
Q 015283          278 ARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QI  355 (410)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-~~  355 (410)
                      +.+.....    ....+.+...+.++ ...++...     .+.+++.+++++++++++.+.|+ ++|    +.+..+ ..
T Consensus       244 ~~l~~~~~----~~~~~~~~~~~~aa~~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~  309 (405)
T 2vi8_A          244 KQIDKAIF----PGIQGGPLMHVIAAKAVAFGEAL-----QDDFKAYAKRVVDNAKRLASALQ-NEG----FTLVSGGTD  309 (405)
T ss_dssp             HHHHHHHT----TTTCSSCCHHHHHHHHHHHHHHH-----SHHHHHHHHHHHHHHHHHHHHHH-HTT----CEEGGGSCS
T ss_pred             HHHHhhhc----ccccCCCCHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHH-hCC----CeEecCCCC
Confidence            66544321    11222222222322 23332110     12356788889999999999998 776    354443 34


Q ss_pred             ceeeecCC-----CHHHHHHhhhcCcEEEcCC------------C--eEEecC-----CCcccHHHHHHHHHHHhhhc
Q 015283          356 GMFSFTGL-----NKAQSDNMTNKWHVYMTKD------------G--RISLAG-----LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       356 ~~~~~~~~-----~~~~~~~ll~~~gi~v~~~------------g--Ris~~~-----~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++++|+.+     +...+.+.+.++||.+.++            +  ||+++.     ++++++++++++|++++++.
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~  387 (405)
T 2vi8_A          310 NHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV  387 (405)
T ss_dssp             SSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred             ceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence            66766643     3444444445579998762            2  999873     57999999999999998653

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.90  E-value=3e-22  Score=190.76  Aligned_cols=215  Identities=15%  Similarity=0.079  Sum_probs=153.1

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~  150 (410)
                      +.....++++.+++++..        +++++  ++||++|+..+.  ...+.+||+|+++.|+|+++...+    +..|.
T Consensus        64 ~~~~~~~l~~~la~~~g~--------~~~~~--~~sGt~A~~~al--~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~  131 (392)
T 3qhx_A           64 GNPTRTALEAALAAVEDA--------AFGRA--FSSGMAAADCAL--RAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNV  131 (392)
T ss_dssp             CCHHHHHHHHHHHHHTTC--------SEEEE--ESSHHHHHHHHH--HHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTC
T ss_pred             CChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHHH--HHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCc
Confidence            455678999999999532        35666  799999999884  334779999999999998776655    66788


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      ++..++.       .|++.+++.+.+   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|..+...  
T Consensus       132 ~~~~v~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~--  196 (392)
T 3qhx_A          132 EYTPVAL-------ADLDAVRAAIRP---TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ--  196 (392)
T ss_dssp             EEEEECT-------TCHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC--
T ss_pred             EEEEeCC-------CCHHHHHHhhCC---CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence            8888775       278999998875   7888888999999999765   778888899999999999998755422  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                        .+.       ....++++.|+||.++.+| .|+||+  +.+++++.+.+.....    .....++...+.++...++.
T Consensus       197 --~~~-------~~~~di~~~S~sK~lg~~g~~~~G~v--~~~~~~~~~~l~~~~~----~~g~~~~~~~~~~~~~~l~~  261 (392)
T 3qhx_A          197 --QPL-------SLGADVVLHSTTKYIGGHSDVVGGAL--VTNDEELDQSFAFLQN----GAGAVPGPFDAYLTMRGLKT  261 (392)
T ss_dssp             --CGG-------GGTCSEEEEETTTTTTCSSCCCCEEE--EESCHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHTT
T ss_pred             --ChH-------HhCCcEEEEcCccccCCCCCceEEEE--EECcHHHHHHHHHHHH----hcCCCCCHHHHHHHHhhhhH
Confidence              111       1135688999999999877 789998  4444676665544322    12234455555555555553


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      -          ....++..++.+.+.+.|+ +.
T Consensus       262 l----------~~~~~~~~~~~~~l~~~L~-~~  283 (392)
T 3qhx_A          262 L----------VLRMQRHSENAAAVAEFLA-EH  283 (392)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHHH-TC
T ss_pred             H----------HHHHHHHHHHHHHHHHHHh-cC
Confidence            2          2334455556666666666 54

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.90  E-value=3.2e-23  Score=201.46  Aligned_cols=292  Identities=13%  Similarity=0.036  Sum_probs=184.7

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh-HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG-SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY  157 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~-a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~  157 (410)
                      ..++.+++.+++.+..|.+  ++ +++  |+|||+ ++.++...+..+.+|+.|+++++.|..+...++..|++++.++.
T Consensus       131 ~~~~~~~~~~~la~~~g~~--~~-~~~--t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~  205 (456)
T 2z67_A          131 MYALTNKILESFFKQLGLN--VH-AIA--TPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVET  205 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTCC--CE-EEE--ESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHcCCC--CC-EEE--eCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEE
Confidence            3445555555554444543  23 777  999995 44433222222226788999999999999999999999988876


Q ss_pred             ec-CCCcccChhhHHHHH-hcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283          158 YD-PKTVGLDFEGMIADI-KAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA  234 (410)
Q Consensus       158 ~~-~~~~~~d~~~l~~~i-~~~-~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~  234 (410)
                      .+ ++++.+|++++++.+ +.. .+++++++.++|+||||.+   .++++|+++|+++|+++++|++|..+..+   ..+
T Consensus       206 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g---~~~  279 (456)
T 2z67_A          206 VLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNY---YLE  279 (456)
T ss_dssp             EEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHH---HHH
T ss_pred             eccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHH---hhH
Confidence            43 456789999999999 420 1367777778999999996   45677778899999999999999877632   001


Q ss_pred             hHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHH
Q 015283          235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD  314 (410)
Q Consensus       235 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~  314 (410)
                      ... ..... ..++++.|++|.++ ++.++||+  +.+++++++++    ...........+.+++.++...+.      
T Consensus       280 ~~~-~~~~~-~~D~~~~s~hK~~~-~p~g~G~l--~~~~~~~~~~l----~~~~~g~~~~~~~~~~~aal~~l~------  344 (456)
T 2z67_A          280 KLK-KAFKY-RVDAVVSSSDKNLL-TPIGGGLV--YSTDAEFIKEI----SLSYPGRASATPVVNTLVSLLSMG------  344 (456)
T ss_dssp             HHH-HHHTS-CCSEEEEEHHHHHC-CCSSCEEE--EESCHHHHHHH----HTTSCSCBCSHHHHHHHHHHHHHH------
T ss_pred             HHH-HhhCC-CCCEEEEcCCCCcC-CCCCeEEE--EEcCHHHHhhc----CcCCCCCCCCCHHHHHHHHHHHHH------
Confidence            111 11111 34567889999765 56889998  44556654443    211111111122333333333322      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcc----CCCCCcccccCCcceeeecCC--C---HHHHHHhhhcCcE---EEc--
Q 015283          315 EWKAEMEMMAGRIKNVRQKLFDSLSAKD----KSGKDWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHV---YMT--  380 (410)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~----g~~~~~~~~~~~~~~~~~~~~--~---~~~~~~ll~~~gi---~v~--  380 (410)
                        .+.+++..++..++++++.+.|+ ++    |    +.+..+. +++ ++.+  +   .++..+|.+ .|+   .+.  
T Consensus       345 --~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~g----~~v~~~~-~~v-~~~~~~~~~~~~l~~~L~~-~gi~~~rv~~~  414 (456)
T 2z67_A          345 --SKNYLELVKNQKNSKKLLDELLN-DLSKKTG----GKFLDVE-SPI-ASCISVNSDPVEIAAKLYN-LRVTGPRGIKK  414 (456)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHH-HHHHHSS----CCBCCCC-CSS-EEEEECSSCHHHHHHHHHH-TTEESCEEECT
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHH-hcccccC----CEecCCC-CeE-EEEEecccHHHHHHHHHHH-cCCCcceEEee
Confidence              23356788888999999999998 77    5    2444444 332 2222  2   355566665 464   333  


Q ss_pred             ------------CCC--eEEec-CCCcccHHHHHHHHHHHh
Q 015283          381 ------------KDG--RISLA-GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       381 ------------~~g--Ris~~-~~~~~~i~~~~~~l~~~l  406 (410)
                                  +.+  |++++ ..|++++++++++|++++
T Consensus       415 ~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          415 TDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             TCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred             cCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence                        223  88876 348999999999998765

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.8e-22  Score=193.12  Aligned_cols=214  Identities=9%  Similarity=0.009  Sum_probs=146.9

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      .....++++.+++++.        .+++++  +++|++|+..+  +...+.+||+|+++.|+|.++...+.    ..|.+
T Consensus        80 ~p~~~~l~~~la~~~g--------~~~~~~--~~sG~~Ai~~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~  147 (414)
T 3ndn_A           80 NPTVSVFEERLRLIEG--------APAAFA--TASGMAAVFTS--LGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQ  147 (414)
T ss_dssp             CHHHHHHHHHHHHHHT--------CSEEEE--ESSHHHHHHHH--HHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred             ChHHHHHHHHHHHHHC--------CCcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcE
Confidence            4456778888888752        245666  79999999887  34446799999999999999877664    48999


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      ++.++..       |++.+++.+++   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|......   
T Consensus       148 ~~~v~~~-------d~~~l~~ai~~---~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~---  211 (414)
T 3ndn_A          148 TVFVDGD-------DLSQWERALSV---PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ---  211 (414)
T ss_dssp             EEEECTT-------CHHHHHHHTSS---CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC---
T ss_pred             EEEeCCC-------CHHHHHHhcCC---CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence            8888762       78999998875   5677777999999999765   678888899999999999998732211   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHH-HHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVANVVGN  309 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~  309 (410)
                       .  .    . ....++++.|+||.++.+| +++|++++   +++.+. .+......    .....+...+.++...++.
T Consensus       212 -~--~----~-~~g~div~~S~sK~l~~~G~~~~G~vv~---~~~~~~~~l~~~~~~----~g~~~~~~~a~~~~~~l~~  276 (414)
T 3ndn_A          212 -Q--G----F-PLGVDVVVYSGTKHIDGQGRVLGGAILG---DREYIDGPVQKLMRH----TGPAMSAFNAWVLLKGLET  276 (414)
T ss_dssp             -C--C----G-GGTCSEEEEETTTTTTCSSCCCCEEEEE---CHHHHTTHHHHHHHH----HCCCCCHHHHHHHHHHGGG
T ss_pred             -C--c----h-hcCCCeEeccCCccccCCCCceEEEEEE---CHHHHHHHHHHHHHH----cCCCCCHHHHHHHHHHHHH
Confidence             0  1    0 1234688999999999888 88999754   665444 44332221    1122333333333333332


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                                +....++..+++..+.+.|+ +.+
T Consensus       277 ----------l~~r~~~~~~~a~~l~~~L~-~~p  299 (414)
T 3ndn_A          277 ----------LAIRVQHSNASAQRIAEFLN-GHP  299 (414)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH-TCT
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHh-cCC
Confidence                      23344555667777777776 553

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.90  E-value=3.2e-21  Score=184.95  Aligned_cols=176  Identities=14%  Similarity=0.077  Sum_probs=132.6

Q ss_pred             cHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEE
Q 015283           54 LDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV  131 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~V  131 (410)
                      ++.+.+++.  ...  .+.|..  .....++++.+++++..        +++++  ++||++|+..+.  ...+.+||+|
T Consensus        35 ~~~~~~~~~--~~~--~~~y~~~~~~~~~~l~~~la~~~g~--------~~~~~--~~~gt~a~~~al--~~l~~~gd~v   98 (412)
T 2cb1_A           35 LEEGQERFA--TGE--GYVYARQKDPTAKALEERLKALEGA--------LEAVV--LASGQAATFAAL--LALLRPGDEV   98 (412)
T ss_dssp             HHHHHHHHH--HCC--SCSBTTTCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHHH--HTTCCTTCEE
T ss_pred             hHHHHHHhc--ccc--CcCcCCCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHHH--HHHhCCCCEE
Confidence            455555553  112  245653  35678999999999632        36777  899999999984  3336799999


Q ss_pred             EEcCCCCcchhhh----hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283          132 LISSPTWGNHKNI----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD  207 (410)
Q Consensus       132 l~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~  207 (410)
                      +++.|+|..+...    ++..|.+++.++.        |++++++.+++   +++++++++|+||||.+.+   +++|++
T Consensus        99 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~---~~~~v~~~~~~n~~G~~~~---l~~i~~  164 (412)
T 2cb1_A           99 VAAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSA---KTRAVFVETVANPALLVPD---LEALAT  164 (412)
T ss_dssp             EEETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHH
T ss_pred             EEeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhcc---CCeEEEEeCCCCCCccccc---HHHHHH
Confidence            9999999876554    4557888777764        47889888865   6788888999999999875   778888


Q ss_pred             HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      +|++||+++|+|++|..+...   ..  ..     ..+.++++.|+||.++.+|.|+||+++
T Consensus       165 l~~~~~~~li~D~~~~~~~~~---~~--~~-----~~~~di~~~S~~K~~~~~~~~~G~~~~  216 (412)
T 2cb1_A          165 LAEEAGVALVVDNTFGAAGAL---CR--PL-----AWGAHVVVESLTKWASGHGSVLGGAVL  216 (412)
T ss_dssp             HHHHHTCEEEEECGGGTTTTS---CC--GG-----GGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred             HHHHcCCEEEEECCCcccccc---CC--cc-----ccCCeEEEECCcccccCCCCcEEEEEE
Confidence            899999999999999876321   11  11     124688999999999989999999854

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.89  E-value=3e-22  Score=189.59  Aligned_cols=310  Identities=11%  Similarity=-0.037  Sum_probs=190.3

Q ss_pred             cHHHHHHHHHhhccCCCccCcC-CcccHHHHHHH-HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCE
Q 015283           54 LDVVKKAENLMLERGENKEYLP-IEGLAAFNKVT-AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK  130 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~ai-a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~  130 (410)
                      ++.+.+++.+.+..+.   |.+ .....++++++ ++++. .      .+++++  ++|||+++.++  +... +.+||+
T Consensus        15 ~~~i~~a~~~~~~~~~---~~~~~~~~~~l~~~~~a~~~g-~------~~~~v~--~~sgt~al~~a--l~~l~~~~Gd~   80 (377)
T 3ju7_A           15 VIEYLDELKEIDASHI---YTNYGPINQRFEQTIMSGFFQ-N------RGAVTT--VANATLGLMAA--IQLKKRKKGKY   80 (377)
T ss_dssp             GGGGHHHHHHHHHHTC---CSSSCHHHHHHHHHHHHHTST-T------CSEEEE--ESCHHHHHHHH--HHHHSCTTCCE
T ss_pred             cHHHHHHHHHHHHcCC---cccCCHHHHHHHHHHHHHHhC-C------CCeEEE--eCCHHHHHHHH--HHHcCCCCcCE
Confidence            5778888888776644   332 34578999999 99964 1      345667  89999999987  4444 679999


Q ss_pred             EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH-hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283          131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI-KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI  209 (410)
Q Consensus       131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i-~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~  209 (410)
                      |+++.|+|..+...+...|++++.+++. .+++.+|++++++.+ .. ++++++++   |+||||...+   +++|.++|
T Consensus        81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~~-~~~tk~v~---~~~~~G~~~~---~~~i~~la  152 (377)
T 3ju7_A           81 ALMPSFTFPATPLAAIWCGLEPYFIDIS-IDDWYMDKTVLWDKIEEL-KEEVAIVV---PYATFGSWMN---LEEYEELE  152 (377)
T ss_dssp             EEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCHHHHHHHHHHH-GGGEEEEC---CBCGGGBCCC---CHHHHHHH
T ss_pred             EEECCCCcHHHHHHHHHcCCEEEEEecC-CccCCcCHHHHHHHHhcC-CCCceEEE---EECCCCCccC---HHHHHHHH
Confidence            9999999999999999999999999883 357889999999988 43 11277776   7899999665   56677778


Q ss_pred             HHcCCcccccccCCCCCCCCCCCchhHhHHH-hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283          210 QEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA  288 (410)
Q Consensus       210 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~  288 (410)
                      + +|+++|+|++|......  ...     .. ....+..++..+.+|.++. | +.|++  +++++++++++........
T Consensus       153 ~-~~~~vi~D~a~a~g~~~--~~~-----~~g~~~~d~~~~S~~~~K~l~~-g-~gG~~--~~~~~~l~~~~~~~~~~g~  220 (377)
T 3ju7_A          153 K-KGVPVVVDAAPGFGLMN--GGM-----HYGQDFSGMIIYSFHATKPFGI-G-EGGLI--YSKNEEDIQRIKRMGNFGF  220 (377)
T ss_dssp             H-TTCCBEEECTTCTTCEE--TTE-----ETTTTCSSEEEEECBTTSSSCC-B-SCEEE--EESCHHHHHHHHHHTBTTB
T ss_pred             h-cCCEEEEECCCccCCeE--CCE-----eccCCCCcEEEEECCCCCcCCC-C-CcEEE--EECCHHHHHHHHHHHhcCC
Confidence            9 99999999997643311  110     11 0012233333345799984 5 45665  5677776666544221110


Q ss_pred             c--------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCcccccCCcceee
Q 015283          289 R--------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG-KDWSFILRQIGMFS  359 (410)
Q Consensus       289 ~--------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~~~~~~~~~~  359 (410)
                      .        ......+.+.+.++...++          .+....++.+++++++.+.|+ +++.. ..+........++.
T Consensus       221 ~~~~~~~~~g~~~~~~~~~aa~~~~~l~----------~l~~~~~~~~~~~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~  289 (377)
T 3ju7_A          221 DTNRECTMMGFNCKMSEYAAAIGIATMK----------KWDDKLKERTRISEWYKQLLQ-SNGLMKKGWQLQKTEAVIQQ  289 (377)
T ss_dssp             CTTSCBCSSCCBCCCCHHHHHHHHHHHH----------THHHHHHHHHHHHHHHHHHHH-HTTTTTTTCBCCCCSCBCCS
T ss_pred             CCCCceeeccccCCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhc-CCCCccccccCCCCCcceEE
Confidence            0        0111233333233333322          224455566666667777777 66421 00111111111211


Q ss_pred             e--cCC----CHHHHHHhhhcCcEEEcCC----------------C-------------eEEec-CCCcccHHHHHHHHH
Q 015283          360 F--TGL----NKAQSDNMTNKWHVYMTKD----------------G-------------RISLA-GLSLAKCEYLADAII  403 (410)
Q Consensus       360 ~--~~~----~~~~~~~ll~~~gi~v~~~----------------g-------------Ris~~-~~~~~~i~~~~~~l~  403 (410)
                      +  +.+    +.+.+.+.|+++||.+..+                +             |+++. .++++|++++++.|+
T Consensus       290 ~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~  369 (377)
T 3ju7_A          290 FMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLG  369 (377)
T ss_dssp             SEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHT
T ss_pred             EEEEEeCChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHH
Confidence            1  111    2566665556679987542                0             55544 368999999999998


Q ss_pred             HHhhh
Q 015283          404 DSYHN  408 (410)
Q Consensus       404 ~~l~~  408 (410)
                      +++..
T Consensus       370 ~~~~~  374 (377)
T 3ju7_A          370 QKVVS  374 (377)
T ss_dssp             C----
T ss_pred             HHHhc
Confidence            88764

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.83  E-value=2.9e-25  Score=214.21  Aligned_cols=332  Identities=14%  Similarity=0.056  Sum_probs=206.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|......|+.  +|.+.+++.+++.......| +.....++.+.+++++. .      .+.+.+  +++|++
T Consensus       100 ~~yiD~~~~~~~~~lGh~--~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~p-~------~~~v~~--~nSGse  167 (465)
T 2yky_A          100 HAYVNFLGEYTAGLFGHS--HPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRFP-S------IDLVRF--TNSGTE  167 (465)
Confidence            467899888763344543  58899988887755432344 44556678888887753 1      467888  899999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCC--CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG  187 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~  187 (410)
                      |++.+.++.+.+..+++|++.+++|.++.....    ..|.  .+..++.       .|++.+++.+++.+++++++++.
T Consensus       168 A~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~e  240 (465)
T 2yky_A          168 ANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVE  240 (465)
Confidence            999997665555567999999999977654322    1232  2233332       37888888887433456666655


Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283          188 CAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       188 ~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      +.+++||.+. +.+.+++|.++|++||+++|+||+|. +..+    ..+....    .+...-+.||||.+|. |+|+||
T Consensus       241 pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g----~~~a~~~----~gv~pDi~t~sK~lg~-G~piG~  310 (465)
T 2yky_A          241 PMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS----GGGAQEM----LGISADLTTLGKYIGG-GMSFGA  310 (465)
Confidence            5566799655 57779999999999999999999999 6432    1111111    1112224489999995 999999


Q ss_pred             EEEEeCCchhHHHHHHH-HHh-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          267 MNVVCSSSDLAARVKSQ-LKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      +++   ++++++.+... ... ....++ +.+.+++.++...|+.-+      +  +...++++++.+++.+.|+ ++..
T Consensus       311 v~~---~~~i~~~l~~~~~g~~~~~~T~-~~npla~aAa~aaL~~l~------~--~~~~~~~~~~~~~l~~~L~-~~~~  377 (465)
T 2yky_A          311 FGG---RRDLMERFDPARDGAFAHAGTF-NNNILTMSAGHAALTQIY------T--RQAASDLSASGDRFRANLN-RIAV  377 (465)
Confidence            754   77866665441 010 122222 334444454433333110      0  1344566666666666665 4421


Q ss_pred             CCCcccccCCcceeeecCCC------------------HHHHHHhhhcCcEEEcCCC--eEEecCCCcccHHHHHHHHHH
Q 015283          345 GKDWSFILRQIGMFSFTGLN------------------KAQSDNMTNKWHVYMTKDG--RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ll~~~gi~v~~~g--Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      ...+....+..|.+.++.+.                  ..++.++++ +||++.|++  .+++. .+++++++++++|++
T Consensus       378 ~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~GV~v~p~~~~~~s~~-~t~edid~~l~~l~~  455 (465)
T 2yky_A          378 ENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLR-KGIYLAPRGMYALSLE-IADAGRDAFAEALAD  455 (465)
Confidence            11122223344555554331                  123556665 699999876  35554 499999999999999


Q ss_pred             Hhhhc
Q 015283          405 SYHNV  409 (410)
Q Consensus       405 ~l~~~  409 (410)
                      +++++
T Consensus       456 ~l~~~  460 (465)
T 2yky_A          456 FIGEQ  460 (465)
Confidence            88754

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.89  E-value=9.1e-21  Score=182.40  Aligned_cols=215  Identities=12%  Similarity=0.093  Sum_probs=147.0

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~  150 (410)
                      +.....++++.+++++..       .+.+++   .+|++++..+  +...+.+||+|+++.|+|.++..    .++..|.
T Consensus       112 ~~~~~~~l~~~lA~l~g~-------~~~v~~---~sG~~Ai~~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~  179 (445)
T 1qgn_A          112 GNPTTVVLEEKISALEGA-------ESTLLM---ASGMCASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGI  179 (445)
T ss_dssp             CCHHHHHHHHHHHHHHTC-------SEEEEE---SCHHHHHHHH--HHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred             CChHHHHHHHHHHHHhCC-------CcEEEe---CCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCC
Confidence            344567999999999632       234555   6667999887  33447799999999999998765    3567788


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCc-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGS-FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS  229 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~-~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~  229 (410)
                      +++.++.       .|++++++.+++   ++ +++++++|+||||.+.+   +++|+++|+++|+++|+|++|...... 
T Consensus       180 ~v~~v~~-------~d~~~l~~ai~~---~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~-  245 (445)
T 1qgn_A          180 TATVIDP-------ADVGALELALNQ---KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ-  245 (445)
T ss_dssp             EEEEECS-------SCHHHHHHHHHH---SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-
T ss_pred             EEEEeCC-------CCHHHHHHHhcc---CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence            8888875       178999999986   56 78888999999999876   667888899999999999998754421 


Q ss_pred             CCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283          230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~  308 (410)
                         ..  .     ....++++.|+||.+|..| .++||+++   ++++++++.....    ......+.....++...++
T Consensus       246 ---~~--~-----~~g~Div~~S~sK~~gg~gd~~~G~l~~---~~~l~~~l~~~~~----~~g~~~~~~~a~~~~~~l~  308 (445)
T 1qgn_A          246 ---KA--L-----ALGADLVLHSATKFLGGHNDVLAGCISG---PLKLVSEIRNLHH----ILGGALNPNAAYLIIRGMK  308 (445)
T ss_dssp             ---CT--T-----TTTCSEEEECTTTTTTCSSSCCCEEEEE---CHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHGG
T ss_pred             ---Cc--c-----ccCCEEEEECCcccccccccceEEEEEE---CHHHHHHHHHHHH----HhCCCCCHHHHHHHHHhHH
Confidence               11  1     1235688999999998655 46899755   7777666654322    1111233333333333333


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .          +....++..++++.+.+.|+ +.+
T Consensus       309 ~----------l~~r~~~~~~~a~~l~~~L~-~~p  332 (445)
T 1qgn_A          309 T----------LHLRVQQQNSTALRMAEILE-AHP  332 (445)
T ss_dssp             G----------HHHHHHHHHHHHHHHHHHHH-TCT
T ss_pred             H----------HHHHHHHHHHHHHHHHHHHh-cCC
Confidence            2          12333445556777777787 653

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.89  E-value=1e-22  Score=200.17  Aligned_cols=352  Identities=10%  Similarity=0.017  Sum_probs=220.9

Q ss_pred             HhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           27 AFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        27 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      .+.+.--+..+++..-.|++....++.++.+.+++.....+.....|.......++++++.+++.+..|.+ ..+.+++ 
T Consensus        86 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~-  163 (497)
T 2qma_A           86 DVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIF-  163 (497)
T ss_dssp             HHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEE-
T ss_pred             HHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEE-
Confidence            33333334556666667777777777788888776544322222456544566777777666666555543 1367888 


Q ss_pred             ecCChhhHHHHHHHHHHH--h---------CC------CC-EEEEcCCCCcchhhhhhhCCC---CccceeeecCCCccc
Q 015283          107 QGLSGTGSLRLAAALIER--Y---------FP------GA-KVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGL  165 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~--~---------~~------gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~  165 (410)
                       |+|||+++..+....+.  +         .+      || .|+++.++|.++...+...|.   +++.+|+  ++++.+
T Consensus       164 -t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~--~~~~~~  240 (497)
T 2qma_A          164 -TSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDA--NADGTM  240 (497)
T ss_dssp             -ESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB--CTTSSB
T ss_pred             -cCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEec--CCCCcC
Confidence             99999999988654321  2         12      46 799999999999888888776   6788887  356889


Q ss_pred             ChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-
Q 015283          166 DFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-  241 (410)
Q Consensus       166 d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-  241 (410)
                      |++.|++.+.+.   +.++.+++.++++||||.   .+++++|+++|++||+++++|++|.++...   .+   .+... 
T Consensus       241 d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~---~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~---~~---~~~~~~  311 (497)
T 2qma_A          241 DITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGA---IDDLDFIADMAVKHDMWMHVDGAYGGALIL---SS---HKSRLK  311 (497)
T ss_dssp             CGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCC---BCCHHHHHHHHHHHTCEEEEEETTGGGGGG---ST---TGGGGT
T ss_pred             CHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCC---CCCHHHHHHHHHHcCCEEEEehhhhHHHHh---Cc---chHhhc
Confidence            999999998752   112446777889999999   456778888899999999999999876642   11   11111 


Q ss_pred             hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcc---cC-----------CChhHHHHHHHHh
Q 015283          242 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMY---SN-----------PPVHGARIVANVV  307 (410)
Q Consensus       242 ~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~~~~~~a~~~l  307 (410)
                      .....++++.|++|.++.| .++|++  +.+++..++.+... ..+.....   .+           ...+.+.++...+
T Consensus       312 gi~~~D~i~~s~hK~l~~p-~~~G~l--~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l  387 (497)
T 2qma_A          312 GVERAHSISVDFHKLFYQT-ISCGAL--LVNDKSNFKFLLHH-ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV  387 (497)
T ss_dssp             TGGGCSEEEEETTTTTCCC-SSCEEE--EESCGGGGGGGCC---------------------CCSCCCTHHHHHHHHHHT
T ss_pred             CcccCCEEEEcchhccCCC-cceEEE--EEeCHHHHHHhcCC-chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh
Confidence            1112346778999998865 689998  44555533322110 00000000   00           0112222233333


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc-ccCCcceeeec--CC--C-----HHHHHHhhhcCcE
Q 015283          308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFT--GL--N-----KAQSDNMTNKWHV  377 (410)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~--~~--~-----~~~~~~ll~~~gi  377 (410)
                      ..        +.+++..++..++++++.+.|+ ++..   +++ .++..+++.|-  +.  .     .++...+.+ .|+
T Consensus       388 g~--------~g~~~~~~~~~~~a~~l~~~L~-~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~-~G~  454 (497)
T 2qma_A          388 GP--------KALGDMYDHLLAQTLEVADMIR-TNDQ---FELLAEPSLSTVLFRATHETADLDELNKALRLEALT-RGI  454 (497)
T ss_dssp             CH--------HHHHHHHHHHHHHHHHHHHHHH-TCTT---EEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHH-HTS
T ss_pred             CH--------HHHHHHHHHHHHHHHHHHHHHh-hCCC---eEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHh-CCC
Confidence            21        2345777788889999999998 7631   444 24455544332  21  1     123345554 588


Q ss_pred             EEcCC----C----eEEec--CCCcccHHHHHHHHHHHhhhc
Q 015283          378 YMTKD----G----RISLA--GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       378 ~v~~~----g----Ris~~--~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+.++    |    ||++.  ..++++++++++.|+++++++
T Consensus       455 ~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~  496 (497)
T 2qma_A          455 AVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL  496 (497)
T ss_dssp             CBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence            77542    2    99873  248999999999999998765

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.89  E-value=1.6e-22  Score=198.64  Aligned_cols=327  Identities=12%  Similarity=0.059  Sum_probs=209.0

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCce-EEEecCChhhHHHHHHHHHHH-h---
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRV-ATVQGLSGTGSLRLAAALIER-Y---  125 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i-~~~~t~ggt~a~~~~~~~~~~-~---  125 (410)
                      .++++.+.+++.+.+.... ..|....+..++++.+.+++.+.+|.+.+++++ .-..++||++++.++...+.. +   
T Consensus        66 ~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~  144 (502)
T 3hbx_A           66 TWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNK  144 (502)
T ss_dssp             CCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHH
Confidence            3457899999988875533 334344456778878777777766665333333 212278999999887433321 1   


Q ss_pred             --CCCC-----EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCC
Q 015283          126 --FPGA-----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT  198 (410)
Q Consensus       126 --~~gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~  198 (410)
                        .+|+     .|++++++|..+...++..|++++.+++. ++++.+|++.+++.+.+   ++.++++++|+||||.+. 
T Consensus       145 ~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~tG~~~-  219 (502)
T 3hbx_A          145 RKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPQQAVDMVDE---NTICVAAILGSTLNGEFE-  219 (502)
T ss_dssp             HHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCB-TTBCSCCHHHHHHHCCT---TEEEEEEEBSCTTTCCBC-
T ss_pred             HHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecC-CCcCcCCHHHHHHHHhh---CCEEEEEecCCCCCCccc-
Confidence              1276     99999999999999999999999999973 34588999999999975   678888899999999965 


Q ss_pred             HHHHHHHHHHHHHc------CCcccccccCCCCC----CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          199 PEQWEKIADVIQEK------NHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       199 ~~~l~~i~~~~~~~------~~~li~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                        ++++|.++|+++      |+++++|++|.++.    .+..   .+.    ......+++..|.+|.++ .+.++||+ 
T Consensus       220 --~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~---~~~----~~~~~~D~v~~s~hK~l~-~p~g~G~~-  288 (502)
T 3hbx_A          220 --DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPEL---EWD----FRLPLVKSINVSGHKYGL-VYAGIGWV-  288 (502)
T ss_dssp             --CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTC---CCS----TTSTTEEEEEEETTTTTC-CCSSCEEE-
T ss_pred             --CHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccc---ccc----cCCCCceEEEECcccccC-CCCCeEEE-
Confidence              466777779988      99999999998654    1111   011    112235677788999874 56778987 


Q ss_pred             EEeCCchhHHHHHHHHHhhccCc-----c-cCC---ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          269 VVCSSSDLAARVKSQLKRLARPM-----Y-SNP---PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                       +.++++.+.........+....     . ...   ...++.++...+.        .+.+.+..++..++++++.+.|+
T Consensus       289 -~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg--------~~g~~~~~~~~~~~a~~l~~~L~  359 (502)
T 3hbx_A          289 -IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--------HEGYRNVMENCRENMIVLREGLE  359 (502)
T ss_dssp             -EESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -EEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence             4455543211100000010000     0 111   1222222222222        23346777888888889999998


Q ss_pred             hccCCCCCcccccC--Ccceeeec--C---CCH-HHHHHhhhcCcEEEc----CC---C----eEEecC-CCcccHHHHH
Q 015283          340 AKDKSGKDWSFILR--QIGMFSFT--G---LNK-AQSDNMTNKWHVYMT----KD---G----RISLAG-LSLAKCEYLA  399 (410)
Q Consensus       340 ~~~g~~~~~~~~~~--~~~~~~~~--~---~~~-~~~~~ll~~~gi~v~----~~---g----Ris~~~-~~~~~i~~~~  399 (410)
                       +++.   +++..+  ..+++.|-  +   ++. ++.+.|.+ .|+.+.    |.   +    ||++.. .++++++.++
T Consensus       360 -~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li  434 (502)
T 3hbx_A          360 -KTER---FNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRR-YGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLV  434 (502)
T ss_dssp             -TTTC---EEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHT-TTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHH
T ss_pred             -hCCC---EEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHh-CCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHH
Confidence             8762   344433  33333321  2   344 44555554 698753    22   2    999874 4889999999


Q ss_pred             HHHHHHhhh
Q 015283          400 DAIIDSYHN  408 (410)
Q Consensus       400 ~~l~~~l~~  408 (410)
                      +.|+++++.
T Consensus       435 ~~L~~~l~~  443 (502)
T 3hbx_A          435 IDIEKVMRE  443 (502)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998865

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.89  E-value=3.5e-23  Score=196.51  Aligned_cols=291  Identities=12%  Similarity=0.098  Sum_probs=185.0

Q ss_pred             HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh--hhhhhCCC--Cccce
Q 015283           80 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK--NIFNDARV--PWSEY  155 (410)
Q Consensus        80 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~--~~~~v  155 (410)
                      .++++.+++++    +.   .+.+++  ++|||+++++++   +.+.+||+|++++++|.++.  ..++..|.  +++.+
T Consensus        38 ~~~~~~l~~~~----~~---~~~v~~--~~sgt~a~~~~~---~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~  105 (379)
T 3ke3_A           38 NDLLSNLKTVY----NA---EAAVII--PGSGTYGMEAVA---RQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVL  105 (379)
T ss_dssp             HHHHHHHHHHH----TC---SEEEEE--ESCHHHHHHHHH---HHHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEE
T ss_pred             HHHHHHHHHHh----CC---CCEEEE--cCChhHHHHHHH---HhCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEE
Confidence            35555555554    22   256777  899999999973   44679999999999987653  34455554  55666


Q ss_pred             eeecC------CC-cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283          156 RYYDP------KT-VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG  228 (410)
Q Consensus       156 ~~~~~------~~-~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~  228 (410)
                      +....      .. ..+|++++++.+.+  ++++++++++++||||.+.+.+++++|.++|++||+++|+|+++.  +. 
T Consensus       106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~--g~-  180 (379)
T 3ke3_A          106 TAERTEDTEAPKPFAPVDIETAVAKIKE--DKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS--GC-  180 (379)
T ss_dssp             ECEESSCCSSCCCEECCCHHHHHHHHHH--HTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC--TT-
T ss_pred             eccccccccccCCCCCCCHHHHHHHHhh--cCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc--CC-
Confidence            65321      11 25799999999864  145566667889999999999999999999999999999999965  31 


Q ss_pred             CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH------------------HHhhccC
Q 015283          229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ------------------LKRLARP  290 (410)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~------------------~~~~~~~  290 (410)
                       ...   .+.    ..+.++++.|++|.++. +.++|++++   ++++++.+...                  .....+.
T Consensus       181 -~~~---~~~----~~~~d~~~~s~~K~l~~-~~g~g~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~  248 (379)
T 3ke3_A          181 -VWL---DMK----ELGIDVLISAPQKGWSS-TPCAGLVML---SAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHA  248 (379)
T ss_dssp             -CCC---CHH----HHTCSEEEECTTTTTCS-CCCEEEEEE---CHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCC
T ss_pred             -ccc---ccc----ccCCCEEEecchhhcCC-CCceEEEEE---CHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCC
Confidence             111   111    11346788899998863 345788765   77766655320                  0000011


Q ss_pred             cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC---cceee-ecCCCHH
Q 015283          291 MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ---IGMFS-FTGLNKA  366 (410)
Q Consensus       291 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~---~~~~~-~~~~~~~  366 (410)
                      ...+++...+.++...|+.  +.   .+.+++.+++.+++++++.+.|+ ++|+    .+..+.   .+... +..-..+
T Consensus       249 ~~~t~~~~~~~a~~aal~~--~~---~~g~~~~~~~~~~l~~~l~~~l~-~~g~----~~~~~~~~~~~~i~~~~~~~~~  318 (379)
T 3ke3_A          249 YHATMPTDSLRQFRDAILE--AK---EIGFDILRDAQWELGNRVRKVLT-DKGI----ESVAAEGFEAPGVVVSYTERDD  318 (379)
T ss_dssp             CSSCCCHHHHHHHHHHHHH--HH---HHCHHHHHHHHHHHHHHHHHHHH-HTTC----CBSBCTTCBCSSEEEEECSCHH
T ss_pred             CCCCCCHHHHHHHHHHHHH--HH---HhcHHHHHHHHHHHHHHHHHHHH-HcCC----EecCCccccCceEEEEccCCcc
Confidence            1113444433333333221  10   11256888889999999999998 8874    333222   22111 1111333


Q ss_pred             H-HHHhhhcCcEEEcCC----------C---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          367 Q-SDNMTNKWHVYMTKD----------G---RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       367 ~-~~~ll~~~gi~v~~~----------g---Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      . ..+.+.++||.+.++          +   ||++.. .|++++++++++|+++++++
T Consensus       319 ~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~  376 (379)
T 3ke3_A          319 MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEV  376 (379)
T ss_dssp             HHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHh
Confidence            3 133445579988765          3   898753 48999999999999998754

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.89  E-value=1e-21  Score=190.46  Aligned_cols=324  Identities=14%  Similarity=0.168  Sum_probs=185.8

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC------CcccHHHH----HHHHHHhcCCCCCcccCCce-
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP------IEGLAAFN----KVTAELLFGADNSVLKEQRV-  103 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr----~aia~~~~~~~~~~~~~~~i-  103 (410)
                      ..|+|..+..       ++++.|++++...+.+.....|+.      ..-..+++    +.+++++...      .+.+ 
T Consensus        55 ~~i~lias~n-------~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~------~~~~~  121 (490)
T 2a7v_A           55 RGLELIASEN-------FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLD------PAQWG  121 (490)
T ss_dssp             HSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCC------TTTEE
T ss_pred             cCceEECCCC-------CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCC------cccCc
Confidence            4566765442       248999999987764433233332      11223566    5556654322      2222 


Q ss_pred             EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh--------hhhhCCCCc--cceeeecCCCcccChhhHHHH
Q 015283          104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN--------IFNDARVPW--SEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus       104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~v~~~~~~~~~~d~~~l~~~  173 (410)
                      ..+.+++|++|+..+  +.+.+.|||+|+++++.|.++..        .+...|..+  +.+++ +.+++.+|++++++.
T Consensus       122 ~~v~~~sGt~An~~a--l~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~v-d~~~~~iD~d~le~~  198 (490)
T 2a7v_A          122 VNVQPYSGSPANLAV--YTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALT  198 (490)
T ss_dssp             EECCCSSHHHHHHHH--HHHHCCSCEECCC-------------------------------CCB-CTTTCSBCHHHHHHH
T ss_pred             eEEeCCchHHHHHHH--HHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccc-ccccCCcCHHHHHHH
Confidence            122256899999887  55568899999999998876432        223445433  34443 234678999999999


Q ss_pred             HhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283          174 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQS  252 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  252 (410)
                      +.+.  ++++++++.++||+.     .++++|.++|++||+++++|+++. ++...+....  .+    .  ..++++.|
T Consensus       199 l~~~--~~klIi~~~s~~~~~-----~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~--~~----~--~aDiv~~S  263 (490)
T 2a7v_A          199 ARLF--RPRLIIAGTSAYARL-----IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPS--PF----K--HADIVTTT  263 (490)
T ss_dssp             HHHH--CCSEEEECCSSCCSC-----CCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCC--GG----G--TCSEEEEE
T ss_pred             Hhhc--CCcEEEEcCCCCCCc-----ccHHHHHHHHHHcCCEEEEccccccccccCCcCCC--CC----C--CCCEEEEC
Confidence            8642  345667788888863     257889999999999999999954 2222111111  11    1  24588899


Q ss_pred             ccccccccCCCcceEEEEeCCc--------------hhHHHHHHHHHhhccCcc-cCCChhHHHHHHHHhCChhhHHHHH
Q 015283          253 YSKNLGLYAERIGAMNVVCSSS--------------DLAARVKSQLKRLARPMY-SNPPVHGARIVANVVGNPALFDEWK  317 (410)
Q Consensus       253 ~sK~~~~~G~r~G~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~  317 (410)
                      +||+++  |.|.|++++  +++              ++.+++..    ..+... ++++.....++...+..     ...
T Consensus       264 ~hK~l~--Gp~GG~i~~--~~~~~~~~~~~~~~~~~~l~~~i~~----~~~~g~qggp~~~~iaAla~Al~~-----~~~  330 (490)
T 2a7v_A          264 THKTLR--GARSGLIFY--RKGVKAVDPKTGREIPYTFEDRINF----AVFPSLQGGPHNHAIAAVAVALKQ-----ACT  330 (490)
T ss_dssp             SSGGGC--SCSCEEEEE--ECSEEEEETTTEEEEECCCHHHHHH----HHTTTTCCSCCHHHHHHHHHHHHH-----HHS
T ss_pred             CcccCc--cccchheee--ccchhcccccccchhhHHHHHHHHH----HhcccCCCCchHHHHHHHHHHHHH-----Hhh
Confidence            999874  677788744  332              33344333    333322 23333322222222221     112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc-CCcceeeecC-----CCHHHHHHhhhcCcEEEcC----C-----
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-RQIGMFSFTG-----LNKAQSDNMTNKWHVYMTK----D-----  382 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~----~-----  382 (410)
                      ++++++++++.++++++.+.|. +.|    +.+.. ....+++|+.     ++.+.+.+.|++.||.+..    +     
T Consensus       331 ~~~~~~~~~~~~na~~L~~~L~-~~G----~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~  405 (490)
T 2a7v_A          331 PMFREYSLQVLKNARAMADALL-ERG----YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAI  405 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-HTT----CEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHH-HcC----cEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCC
Confidence            2346778888999999999999 877    34443 2234556653     3566677777888999863    2     


Q ss_pred             ---C-eEEec-----CCCcccHHHHHHHHHHHhh
Q 015283          383 ---G-RISLA-----GLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       383 ---g-Ris~~-----~~~~~~i~~~~~~l~~~l~  407 (410)
                         + ||+..     +.++++++++++.|.+++.
T Consensus       406 ~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~  439 (490)
T 2a7v_A          406 TPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             SCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence               2 88643     2588999999999998875

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.88  E-value=3.5e-21  Score=183.34  Aligned_cols=213  Identities=15%  Similarity=0.097  Sum_probs=147.6

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~  150 (410)
                      +..+..++|+++++++..       . +.++  +.+|++++.++..   .+.+||+|+++.|+|.+...    .++..|.
T Consensus        53 ~~~~~~~lr~~la~~~g~-------~-~~i~--~~sGt~a~~~al~---~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~  119 (393)
T 1n8p_A           53 QNPNRENLERAVAALENA-------Q-YGLA--FSSGSATTATILQ---SLPQGSHAVSIGDVYGGTHRYFTKVANAHGV  119 (393)
T ss_dssp             CCHHHHHHHHHHHHHTTC-------S-EEEE--ESCHHHHHHHHHH---TSCSSCEEEEESSCCHHHHHHHHHTSTTTCS
T ss_pred             CChhHHHHHHHHHHHhCC-------C-cEEE--ECChHHHHHHHHH---HcCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence            445678999999999632       2 3444  4667999999843   46799999999999985443    5567888


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc----CCcccccccCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK----NHIPFFDVAYQGFA  226 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~----~~~li~Deay~~~~  226 (410)
                      +++.++..       | +++++.+++   +++++++++|+||||.+.+   +++|.++|+++    |+++|+|++|..+.
T Consensus       120 ~v~~v~~~-------d-~~l~~~i~~---~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~  185 (393)
T 1n8p_A          120 ETSFTNDL-------L-NDLPQLIKE---NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPY  185 (393)
T ss_dssp             CCEEESSH-------H-HHHHHHSCS---SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHH
T ss_pred             EEEEeCCC-------h-HHHHHhccc---CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccc
Confidence            88888762       6 788888864   6888888999999999886   67788889999    99999999988665


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN  305 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  305 (410)
                      ..    +..      . .+.++++.|+||.+|.+|+|+ ||+  +++++++++.+......    ....++...+.++..
T Consensus       186 ~~----~~~------~-~~~di~~~S~sK~~g~~G~rigG~~--~~~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~  248 (393)
T 1n8p_A          186 IS----NPL------N-FGADIVVHSATKYINGHSDVVLGVL--ATNNKPLYERLQFLQNA----IGAIPSPFDAWLTHR  248 (393)
T ss_dssp             HC----CGG------G-GTCSEEEEETTTTTTCSSCCCCEEE--EESCHHHHHHHHHHHHH----HCCCCCHHHHHHHHH
T ss_pred             cC----CHH------H-cCCeEEEEECcccccCCCCceeEEE--EeCCHHHHHHHHHHHHh----cCCCCCHHHHHHHHh
Confidence            32    111      1 146799999999999999999 886  44456766666543221    112233333333444


Q ss_pred             HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      .++..          ....++..++...+.+.|. +.
T Consensus       249 ~l~~~----------~~~~~~~~~~~~~l~~~L~-~~  274 (393)
T 1n8p_A          249 GLKTL----------HLRVRQAALSANKIAEFLA-AD  274 (393)
T ss_dssp             HHTTH----------HHHHHHHHHHHHHHHHHHT-SC
T ss_pred             ccchH----------HHHHHHHHHHHHHHHHHHH-hC
Confidence            44421          2333444555666666666 44

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.88  E-value=6.8e-21  Score=181.28  Aligned_cols=247  Identities=14%  Similarity=0.075  Sum_probs=168.2

Q ss_pred             HHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           55 DVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        55 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      .++.+++.+....      .....| +..+..++++.+++++...       ..++++++++|++|+..+  +...+.+|
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y-~~~~~~~Le~~lA~l~g~e-------~alv~p~~~sGt~Ai~~a--l~all~~G  101 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGY-DDEGRDTLERVYATVFKTE-------AALVRPQIISGTHAISTV--LFGILRPD  101 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCT-TCHHHHHHHHHHHHHHTCS-------EEEEETTSCSHHHHHHHH--HHHHCCTT
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCC-ChhHHHHHHHHHHHHhCCC-------cEEEECCCccHHHHHHHH--HHHhcCCC
Confidence            5666777664311      111334 3456789999999996332       234322258899999887  45557899


Q ss_pred             CEEEEcC-CCCcchhh----------hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC----CCCCC
Q 015283          129 AKVLISS-PTWGNHKN----------IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHNPT  193 (410)
Q Consensus       129 d~Vl~~~-p~y~~~~~----------~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~----p~NPt  193 (410)
                      |+|++++ |.|..+..          .++..|.+++.+++.  +++.+|++++++.+++   +++++++++    |+|||
T Consensus       102 D~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~--~~g~~d~e~l~~ai~~---~tklV~i~~s~g~p~npt  176 (409)
T 3jzl_A          102 DELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLL--ENGDVDFPRIAKKMTP---KTKMIGIQRSRGYADRPS  176 (409)
T ss_dssp             CEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCC--TTSCCCHHHHHHHCCT---TEEEEEEECSCTTSSSCC
T ss_pred             CEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCC--CCCCcCHHHHHHhccC---CCeEEEEECCCCCCCCCc
Confidence            9999998 99998874          456678888888873  4577999999999875   678888888    99999


Q ss_pred             CCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC-CcceEEEE
Q 015283          194 GIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVV  270 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~  270 (410)
                      |.   ..++++|+++|++  +|+++++|++|..+.+. ..  +.       ....+++++|+||.+|.+|. +.||+++ 
T Consensus       177 g~---v~~l~~I~~la~~~~~~~~livD~a~~~~~~~-~~--p~-------~~g~Div~~S~sK~lgg~~~~~GG~v~~-  242 (409)
T 3jzl_A          177 FT---IEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY-QE--PP-------EVGADIIAGSLIKNPGGGLAKTGGYIAG-  242 (409)
T ss_dssp             CC---HHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS-CC--SG-------GGTCSEEEEETTSGGGTTTCSSCEEEEE-
T ss_pred             Cc---cccHHHHHHHHHhhCCCCEEEEeCCccccccc-CC--cc-------ccCCeEEEECccccCCccCCceEEEEEe-
Confidence            98   7899999999999  99999999999877632 11  11       11346899999999986663 3577644 


Q ss_pred             eCCchhHHHHHHHHHhh-ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          271 CSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                        ++++++++....... ........... +.++...+          +.....+++..+++.++.+.|+ ++|.
T Consensus       243 --~~~li~~l~~~~~~~~~g~~~g~~~~~-~~~~l~gl----------~~~~~r~~~~~~~a~~la~~L~-~~g~  303 (409)
T 3jzl_A          243 --KEALVDLCGYRLTTPGIGREAGASLYS-LLEMYQGF----------FLAPHVTAQAIKGARFTAAMLA-EFGV  303 (409)
T ss_dssp             --CHHHHHHHHHHHSCTTTGGGCCCCTTC-HHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred             --CHHHHHHHHHHhccccccccccccHHH-HHHHHHHH----------hhHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence              788777766543211 10111111111 12222222          1234566777888899999998 8874

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.88  E-value=4.2e-22  Score=195.33  Aligned_cols=327  Identities=10%  Similarity=0.002  Sum_probs=208.3

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCccc-------CCceEEEecCChhhHHHHHHHHHHHh-
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-------EQRVATVQGLSGTGSLRLAAALIERY-  125 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~-------~~~i~~~~t~ggt~a~~~~~~~~~~~-  125 (410)
                      +..+.+++..+++... ..|....+..++++++++++.+.+|.+.+       ...+++  |+|||+|+..+....... 
T Consensus        87 ~~~~~~~~~~~~n~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~--t~ggTeA~~~al~~~~~~~  163 (486)
T 1js3_A           87 PAMLADMLCGAIGCIG-FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI--QGSASEATLVALLAARTKV  163 (486)
T ss_dssp             HHHHHHHHHHHHCCCC-SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE--ESCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCc-cccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEE--cCCcHHHHHHHHHHHHHHH
Confidence            4567777777765543 56766667889999999888777766432       245777  999999988874433221 


Q ss_pred             CC------CC--------E--EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEe
Q 015283          126 FP------GA--------K--VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLH  186 (410)
Q Consensus       126 ~~------gd--------~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~  186 (410)
                      .+      ||        .  |++++++|..+...++..|.+++.+|+  ++++.+|++.|++.+.+.   +..+.++++
T Consensus       164 ~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~--d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  241 (486)
T 1js3_A          164 VRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPS--DGKFAMRASALQEALERDKAAGLIPFFVVA  241 (486)
T ss_dssp             HHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECC--CTTSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             hhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeec--CCCCCCCHHHHHHHHHHHHhCCCCceEEEE
Confidence            11      43        3  788999999999999999999999988  357889999999999751   111247777


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      ++|+||||.   .+++++|+++|++||+++++|++|.++.....+..  ..  +........++.|.+|.++.| +++|+
T Consensus       242 ~~~~n~tG~---~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~--~~--~~g~~~adsi~~~~hK~~~~p-~~~G~  313 (486)
T 1js3_A          242 TLGTTSCCS---FDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFR--HL--LNGVEFADSFNFNPHKWLLVN-FDCSA  313 (486)
T ss_dssp             EBSCTTTCC---BCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTG--GG--GTTGGGCSEEEECHHHHSSCC-SSCEE
T ss_pred             eCCCCCCCC---CCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHH--HH--hcCccccCeeEEchhhhcCCC-cceEE
Confidence            899999998   46788999999999999999999887543100111  10  001112234567899999865 88999


Q ss_pred             EEEEeCCchh-HHHHH---HHHHhhcc------C--c----cc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          267 MNVVCSSSDL-AARVK---SQLKRLAR------P--M----YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       267 l~~~~~~~~~-~~~~~---~~~~~~~~------~--~----~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      +  ++++++. .+.+.   .++.....      .  .    .+ ....+.+.++...+.        .+.+++..++..+
T Consensus       314 l--~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g--------~~g~~~~~~~~~~  383 (486)
T 1js3_A          314 M--WVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG--------VKGLQAYIRKHVQ  383 (486)
T ss_dssp             E--EESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH--------HHHHHHHHHHHHH
T ss_pred             E--EEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh--------HHHHHHHHHHHHH
Confidence            8  4455543 22221   11111000      0  0    00 112233333333321        2335677788888


Q ss_pred             HHHHHHHHhhhccCCCCCcccc-cCCcceeeec--CC---CHHHHHHhhhcCcEEE-cCC---C----eEEecC--CCcc
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFI-LRQIGMFSFT--GL---NKAQSDNMTNKWHVYM-TKD---G----RISLAG--LSLA  393 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~~--~~---~~~~~~~ll~~~gi~v-~~~---g----Ris~~~--~~~~  393 (410)
                      +++++.+.|+ +.+.   +++. ++..+.+.|-  +.   +.++.+++.++ |+.+ .++   +    |+++..  .+++
T Consensus       384 ~a~~l~~~L~-~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~lRi~~~~~~~t~~  458 (486)
T 1js3_A          384 LSHEFEAFVL-QDPR---FEVCAEVTLGLVCFRLKGSDGLNEALLERINSA-RKIHLVPCRLRGQFVLRFAICSRKVESG  458 (486)
T ss_dssp             HHHHHHHHHH-HCTT---EEECSCCCSSEEEEEESSCHHHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHH
T ss_pred             HHHHHHHHHh-cCCC---eEEeCCCceeEEEEEecChHHHHHHHHHHHHhc-CCEEEEEEEECCEEEEEEEeCCCCCCHH
Confidence            9999999998 7631   4443 3444555432  22   23445666654 6543 321   2    999754  3778


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      ++++++++|++++++
T Consensus       459 di~~~~~~l~~~~~~  473 (486)
T 1js3_A          459 HVRLAWEHIRGLAAE  473 (486)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988754

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.88  E-value=1.2e-20  Score=181.11  Aligned_cols=159  Identities=13%  Similarity=0.043  Sum_probs=123.4

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~  150 (410)
                      +.....++++.+++++..        +..++  +++|++|+.++  +...+.+||+|++++|+|.++..    .++..|.
T Consensus        80 ~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~  147 (430)
T 3ri6_A           80 SNPTVEDLEQRLKNLTGA--------LGVLA--LGSGMAAISTA--ILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGI  147 (430)
T ss_dssp             CCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHHCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCC
Confidence            456678999999998633        22344  57888998887  44457899999999999998877    5668899


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  230 (410)
                      +++.++..       |++.+++.+++   +++++++++|+||||.+.+   +++|+++|+++|+++|+|++|......  
T Consensus       148 ~~~~v~~~-------d~~~l~~ai~~---~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~--  212 (430)
T 3ri6_A          148 EVRFVDVM-------DSLAVEHACDE---TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL--  212 (430)
T ss_dssp             EEEEECTT-------CHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC--
T ss_pred             EEEEeCCC-------CHHHHHHhhCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence            98888762       78999998875   7888889999999999876   567788899999999999998754431  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                        .+.       ..+.++++.|+||.++.+|..+|.+++
T Consensus       213 --~~~-------~~g~div~~S~sK~l~g~g~~~gG~vv  242 (430)
T 3ri6_A          213 --EAK-------RLGVDIEVLSSTKFISGGGTSVGGVLI  242 (430)
T ss_dssp             --CGG-------GGTCSEEEEECCCEEETTEEECCEEEE
T ss_pred             --ChH-------HcCCEEEEECCcccccCCCCceEEEEE
Confidence              111       113568999999999877777777743

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.88  E-value=1.1e-20  Score=180.45  Aligned_cols=248  Identities=15%  Similarity=0.089  Sum_probs=168.6

Q ss_pred             HHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           55 DVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        55 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      +.|.+++.+....      .....| +..|..++++.+++++...       ..++++++++|++|+..+  +...+.||
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y-~~~~~~~Le~~lA~l~g~e-------~alv~p~~~sGt~Ai~~a--l~all~pG  115 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGY-GDIGRDSLDAVYARVFNTE-------SALVRPHFVNGTHALGAA--LFGNLRPG  115 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHHTCS-------EEEEETTCCSHHHHHHHH--HHHHCCTT
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCC-CHHHHHHHHHHHHHHhCCc-------ceEEeCCCccHHHHHHHH--HHHHhCCC
Confidence            6677777664211      111234 4456889999999996432       234422258889999887  45557899


Q ss_pred             CEEEEcC-CCCcchh-----------hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC----CCCC
Q 015283          129 AKVLISS-PTWGNHK-----------NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHNP  192 (410)
Q Consensus       129 d~Vl~~~-p~y~~~~-----------~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~----p~NP  192 (410)
                      |+|++++ |.|+.+.           ..++..|.+++.+++.  +++.+|++.+++.+++. ++++++++++    |+||
T Consensus       116 D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~--~~g~~D~e~l~~~l~~~-~~tklV~i~~s~~~p~np  192 (427)
T 3i16_A          116 NTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLK--EDGKPNLEEIEKVLKED-ESITLVHIQRSTGYGWRR  192 (427)
T ss_dssp             CEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCC--TTSSCCHHHHHHHHHTC-TTEEEEEEECSCCSSSSC
T ss_pred             CEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCc--cCCCcCHHHHHHHhhCC-CCCEEEEEEcCCCCCCCC
Confidence            9999999 9999876           3455678888888873  44678999999999831 2677777777    8999


Q ss_pred             CCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEE
Q 015283          193 TGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNV  269 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~  269 (410)
                      ||.   ..++++|+++|++  +|+++++|++|..+.+.   ..+.       ....+++++|+||.+|.+| .+.||+++
T Consensus       193 tg~---i~dl~~i~~la~~~~~g~~livD~a~~~~~~~---~~p~-------~~gaDiv~~S~sK~lgg~g~~~gG~i~~  259 (427)
T 3i16_A          193 ALL---IEDIKSIVDCVKNIRKDIICFVDNCYGEFMDT---KEPT-------DVGADLIAGSLIKNIGGGIAPTGGYLAG  259 (427)
T ss_dssp             CCC---HHHHHHHHHHHHHHCTTSEEEEECTTTTTSSS---SCGG-------GGTCSEEEEETTSGGGTTTCCSCEEEEE
T ss_pred             ccc---HHHHHHHHHHHHHhCCCCEEEEECCCcccccc---CCcc-------ccCCeEEEecCcccCCCCCCceEEEEEE
Confidence            987   7899999999999  99999999999877632   1111       1134689999999998666 56688654


Q ss_pred             EeCCchhHHHHHHHHHhhccCccc-CCChhH-HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          270 VCSSSDLAARVKSQLKRLARPMYS-NPPVHG-ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                         ++++++++.....  ...... ..+... ..++...+          +......++..+++..+.+.|+ ++|.
T Consensus       260 ---~~~li~~l~~~~~--~~~~g~~~~~~~~~a~~~l~gl----------~~~~~r~~~~~~~a~~la~~L~-~~g~  320 (427)
T 3i16_A          260 ---TKDCIEKTSYRLT--VPGIGGECGSTFGVVRSMYQGL----------FLAPHISMEALKGAILCSRIME-LAGF  320 (427)
T ss_dssp             ---CHHHHHHHHHHHS--CTTTGGGCCCCTTCHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred             ---CHHHHHHHHHhcc--cCccCccCCccHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence               7887777665432  111111 122121 22222221          1234667788888889999998 8873

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.87  E-value=5.3e-21  Score=183.54  Aligned_cols=253  Identities=16%  Similarity=0.088  Sum_probs=165.0

Q ss_pred             cHHHHHHHHHhhcc-C---CCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283           54 LDVVKKAENLMLER-G---ENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG  128 (410)
Q Consensus        54 ~~~v~~a~~~~~~~-~---~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g  128 (410)
                      .+++.+++.+.... .   ....|. +..+..++++.+++++..    .....++.+   .+|++|+..+  +...+.+|
T Consensus        37 ~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~----~~~~~~i~~---~sGt~Ai~~a--l~al~~~G  107 (431)
T 3ht4_A           37 QFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA----EAGLVRPQI---ISGTHAISTA--LFGILRPG  107 (431)
T ss_dssp             HHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTC----SEECCBTTS---CSHHHHHHHH--HHTTCCTT
T ss_pred             HHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCC----Cccccccee---eCHHHHHHHH--HHHhCCCC
Confidence            46777777664311 1   011121 233455667777766432    222223334   4789999887  44457799


Q ss_pred             CEEEEcC-CCCcchhhhh----------hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC-CCCCCCCCC
Q 015283          129 AKVLISS-PTWGNHKNIF----------NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG-CAHNPTGID  196 (410)
Q Consensus       129 d~Vl~~~-p~y~~~~~~~----------~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~-~p~NPtG~~  196 (410)
                      |+|++++ |.|..+...+          +..|.+++.++..  +++.+|++.+++.+++   ++++++++ +|+||||..
T Consensus       108 d~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~--~~~~~d~e~l~~~l~~---~tk~V~i~~sp~np~~~~  182 (431)
T 3ht4_A          108 DELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLT--EGGLVDFEAVAAAIHS---NTKMIGIQRSKGYATRPS  182 (431)
T ss_dssp             CEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBC--TTSSBCHHHHHHHCCT---TEEEEEEECSCTTSSSCC
T ss_pred             CEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCC--CCCCcCHHHHHhhcCC---CCeEEEEECCCCCCCCCc
Confidence            9999998 9999887544          4578888888873  4578999999999875   66666666 699999999


Q ss_pred             CCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCC
Q 015283          197 PTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSS  273 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~  273 (410)
                      ++.+++++|+++|++  +|+++|+|++|..+.+..   .+.       ....+++++|+||.+|. .+...||+++   +
T Consensus       183 ~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~---~~~-------~~g~Di~~~S~sK~lgg~~~~~GG~v~~---~  249 (431)
T 3ht4_A          183 FTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQ---EPC-------HVGADLMAGSLIKNPGGGIVKTGGYIVG---K  249 (431)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSC---CGG-------GTTCSEEEEETTSGGGTTTCSSCEEEEE---C
T ss_pred             CCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCC---Ccc-------ccCCeEEEcCccccCCCCCCCceEEEEe---c
Confidence            999999999999999  999999999999887531   111       11246899999999763 1233488754   7


Q ss_pred             chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      +++++++..............++...+.++...+          +......++..++..++.+.|+ ++|.
T Consensus       250 ~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l----------~~~~~~~~~~~~~a~~l~~~L~-~~g~  309 (431)
T 3ht4_A          250 EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF----------FLAPHVAGQALKGAIFTAAFLE-KLGM  309 (431)
T ss_dssp             HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-HHTC
T ss_pred             HHHHHHHHHHhccCCcccccCccHHHHHHHHhHh----------hhHHHHHHHHHHHHHHHHHHHH-hCcC
Confidence            8877776554331111111112111112222211          1224556777888888899998 8874

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.87  E-value=2.2e-21  Score=190.96  Aligned_cols=323  Identities=11%  Similarity=0.019  Sum_probs=205.2

Q ss_pred             HHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh------CCC----
Q 015283           59 KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------FPG----  128 (410)
Q Consensus        59 ~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~------~~g----  128 (410)
                      +.+..+.+... ..|....+..++++++.+++.+..|.+.+.+++++  ++|||+++.++...++..      .+|    
T Consensus       111 ~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~--t~ggtea~~~al~~~~~~~~~~~~~~G~~~~  187 (504)
T 2okj_A          111 EWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIF--SPGGAISNMYSIMAARYKYFPEVKTKGMAAV  187 (504)
T ss_dssp             HHHHHHHCCBS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEE--ESSHHHHHHHHHHHHHHHHCTTHHHHCGGGS
T ss_pred             HHHHHhhccCC-CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEE--eCCcHHHHHHHHHHHHHHHhhHHhhcCcccc
Confidence            44555444432 45655556667777777776665565433568888  999999999885554321      246    


Q ss_pred             -C-EEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHH
Q 015283          129 -A-KVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPE  200 (410)
Q Consensus       129 -d-~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~  200 (410)
                       + .|+++++.|..+...+...|.   +++.+|+  ++++.+|++.|++.+.+.   +.++.++++++|+||||.+   .
T Consensus       188 ~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~  262 (504)
T 2okj_A          188 PKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC--NERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---D  262 (504)
T ss_dssp             CCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB--CTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---C
T ss_pred             CCeEEEECCcchHHHHHHHHHcCCCcccEEEEec--CCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---C
Confidence             6 789999999999988888776   7788887  356889999999998651   2247788889999999995   4


Q ss_pred             HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283          201 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       201 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      ++++|+++|++||+++++|++|.++.....+.. ..   +......++++.|++|.++.| .++|+++  ++++++.+..
T Consensus       263 ~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~-~~---~~g~~~~D~i~~~~hK~~~~p-~~~g~l~--~~~~~~~~~~  335 (504)
T 2okj_A          263 PIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR-HK---LNGIERANSVTWNPHKMMGVL-LQCSAIL--VKEKGILQGC  335 (504)
T ss_dssp             CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG-GG---GTTGGGCSEEEECTTSTTCCC-SCCEEEE--ESSTTHHHHH
T ss_pred             CHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhH-hh---cCCcccCCEEEECchhhcCCC-cceEEEE--EECHHHHHHH
Confidence            577888889999999999999987764211100 11   111112346778999998855 6889984  4555543322


Q ss_pred             HHHHHhhccC-cc-------------c---CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          281 KSQLKRLARP-MY-------------S---NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       281 ~~~~~~~~~~-~~-------------~---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ......+... ..             .   ....+.+.++...+.        .+.+++..++..++++++.+.|+ +..
T Consensus       336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg--------~~g~~~~~~~~~~~a~~l~~~L~-~~~  406 (504)
T 2okj_A          336 NQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--------TVGFENQINKCLELAEYLYAKIK-NRE  406 (504)
T ss_dssp             HCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHT-TCT
T ss_pred             hcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            1111111100 00             0   011233333333332        23356777888889999999998 763


Q ss_pred             CCCCccccc---CCcceeeec--CC------------------CHHHHHHhhhcCcE-EEcC----C--C--eEEecC--
Q 015283          344 SGKDWSFIL---RQIGMFSFT--GL------------------NKAQSDNMTNKWHV-YMTK----D--G--RISLAG--  389 (410)
Q Consensus       344 ~~~~~~~~~---~~~~~~~~~--~~------------------~~~~~~~ll~~~gi-~v~~----~--g--Ris~~~--  389 (410)
                      .   +++..   +..+++.|.  +.                  ..++.+++.++ |+ ++.+    +  +  |+++++  
T Consensus       407 ~---~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~~lRis~~~~~  482 (504)
T 2okj_A          407 E---FEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQPQGDKANFFRMVISNPA  482 (504)
T ss_dssp             T---EEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEECCCCTT
T ss_pred             C---EEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEeeEECCceEEEEEEeCCCC
Confidence            1   44442   566666553  11                  12345566654 64 3321    2  2  998862  


Q ss_pred             CCcccHHHHHHHHHHHhhhc
Q 015283          390 LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .+++++++++++|+++++++
T Consensus       483 ~t~edi~~~~~~l~~~~~~~  502 (504)
T 2okj_A          483 ATQSDIDFLIEEIERLGQDL  502 (504)
T ss_dssp             CCHHHHHHHHHHHHHHHTC-
T ss_pred             CCHHHHHHHHHHHHHHHHHH
Confidence            38899999999999988764

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.87  E-value=1.5e-20  Score=179.45  Aligned_cols=250  Identities=13%  Similarity=0.044  Sum_probs=167.2

Q ss_pred             cHHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCC
Q 015283           54 LDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP  127 (410)
Q Consensus        54 ~~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~  127 (410)
                      .+.|.+++.+....      .....| +..|..++++.+++++...       ..++++++++|++|+..+  +...+.|
T Consensus        46 ~~~Vl~a~~~~~~~~~~~~~~~gy~Y-~~~g~~~Le~~lA~l~g~e-------~alv~p~~~sGt~A~~~a--l~all~p  115 (427)
T 3hvy_A           46 QLKVLKAFQEERISESHFTNSSGYGY-NDIGRDSLDRVYANIFNTE-------SAFVRPHFVNGTHAIGAA--LFGNLRP  115 (427)
T ss_dssp             HHHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHHTCS-------EEEEETTCCSHHHHHHHH--HHHTCCT
T ss_pred             HHHHHHHHHHHHHHHHhcccCcCCCC-CchhHHHHHHHHHHHhCCC-------ceEEeCCCCcHHHHHHHH--HHHhcCC
Confidence            36777777765321      111234 3447889999999996432       234421258899999887  4555789


Q ss_pred             CCEEEEcC-CCCcchh-----------hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC----CCC
Q 015283          128 GAKVLISS-PTWGNHK-----------NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHN  191 (410)
Q Consensus       128 gd~Vl~~~-p~y~~~~-----------~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~----p~N  191 (410)
                      ||+|++++ |.|+.+.           ..++..|.+++.++.   +++.+|++.+++.+++. ++++++++++    |+|
T Consensus       116 GD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~-~~tklV~i~~s~gyp~n  191 (427)
T 3hvy_A          116 NDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKD-DSIKLIHIQRSTGYGWR  191 (427)
T ss_dssp             TCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHC-TTEEEEEEESSCCSSSS
T ss_pred             CCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCC-CCCEEEEEECCCCCCCC
Confidence            99999999 9998876           445567888888876   35679999999999831 2677777777    899


Q ss_pred             CCCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEE
Q 015283          192 PTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMN  268 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~  268 (410)
                      |||.   ..++++|+++|++  +|+++++|++|..+.+.   ..+.       ....+++++|+||.+|.+| .+.||++
T Consensus       192 ptg~---v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~---~~p~-------~~gaDiv~~S~sK~lgg~g~~~GG~i~  258 (427)
T 3hvy_A          192 KSLR---IAEIAEIIKSIREVNENVIVFVDNCYGEFVEE---KEPT-------DVGADIIAGSLIKNIGGGIATTGGYIA  258 (427)
T ss_dssp             CCCC---HHHHHHHHHHHHHHCSSSEEEEECTTCTTTSS---SCGG-------GGTCSEEEEETTSGGGTTTCCSCEEEE
T ss_pred             cccc---HHHHHHHHHHHHHhCCCCEEEEECCccccccC---CCCc-------ccCCeEEEECCcccccccccceEEEEE
Confidence            9987   7899999999999  89999999999877632   1111       1134689999999998655 4457764


Q ss_pred             EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      +   ++++++++..............++...+.++...+.          ......++..+++.++.+.|+ ++|.
T Consensus       259 ~---~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~----------~~~~r~~~~~~~a~~la~~L~-~~g~  320 (427)
T 3hvy_A          259 G---KEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLF----------MAPHVTIEAVKGAVFCARIME-LAGF  320 (427)
T ss_dssp             E---CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred             E---CHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHh----------HHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence            4   788777766543211000011121111222222221          124566777888888999998 8874

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.87  E-value=5.6e-21  Score=187.90  Aligned_cols=326  Identities=11%  Similarity=0.031  Sum_probs=213.0

Q ss_pred             HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh---------
Q 015283           55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---------  125 (410)
Q Consensus        55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~---------  125 (410)
                      ..+.+++...++... ..|....+..++++++++|+.+.+|.+.+++.+++  ++|||+|+..+.......         
T Consensus       110 ~~~~e~l~~~~~~~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~~~~~G  186 (511)
T 3vp6_A          110 GLAGEWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIF--SPGGAISNMYSIMAARYKYFPEVKTKG  186 (511)
T ss_dssp             HHHHHHHHHHHCCCS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEE--ESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred             HHHHHHHHHHhccCC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEE--CCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence            445566776665543 67877788899999999998877777655578888  999999998874443321         


Q ss_pred             ---CCCCEEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCC
Q 015283          126 ---FPGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGID  196 (410)
Q Consensus       126 ---~~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~  196 (410)
                         .+++.|++++++|.++...++..|.   +++.++.  ++++.+|++.|++.+.+.   +..+++++.++++||||.+
T Consensus       187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~--d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v  264 (511)
T 3vp6_A          187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC--NERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF  264 (511)
T ss_dssp             GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB--CTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred             cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeec--CCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence               1567899999999999999999988   7777777  356889999999999752   1227788889999999995


Q ss_pred             CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh
Q 015283          197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL  276 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~  276 (410)
                         +++++|+++|++||+++++|++|.......   +.... .+......++++.+.+|.++.| ...|++  +.++++.
T Consensus       265 ---d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~---~~~~~-~~~g~~~aDsv~~~~hK~l~~p-~g~g~l--~~~~~~~  334 (511)
T 3vp6_A          265 ---DPIQEIADICEKYNLWLHVDAAWGGGLLMS---RKHRH-KLNGIERANSVTWNPHKMMGVL-LQCSAI--LVKEKGI  334 (511)
T ss_dssp             ---CCHHHHHHHHHHHTCEEEEEETTGGGGGGC---TTTGG-GGTTGGGCSEEEECTTSTTCCC-SCCEEE--EESSTTH
T ss_pred             ---ccHHHHHHHHHHcCCEEEEEccchhhHhhC---hhhhh-hccCCccCCEEEECcccccCCC-cCeEEE--EEeCHHH
Confidence               678899999999999999999987655311   00010 0111112456678999998755 667887  4556654


Q ss_pred             HHHHHHHHHhhccCc------------c----c-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          277 AARVKSQLKRLARPM------------Y----S-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       277 ~~~~~~~~~~~~~~~------------~----~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      ..+.......+....            +    + ....+...++...+.        .+.+++..++..++.+++.+.|+
T Consensus       335 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g--------~~gl~~~~~~~~~~a~~l~~~L~  406 (511)
T 3vp6_A          335 LQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--------TVGFENQINKCLELAEYLYAKIK  406 (511)
T ss_dssp             HHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHh
Confidence            333221111111100            0    0 011222222322221        23456788888999999999998


Q ss_pred             hccCCCCCccccc---CCcceeeec--C--C----------------CHHHHHHhhhcCcEEEcC-----CC----eEEe
Q 015283          340 AKDKSGKDWSFIL---RQIGMFSFT--G--L----------------NKAQSDNMTNKWHVYMTK-----DG----RISL  387 (410)
Q Consensus       340 ~~~g~~~~~~~~~---~~~~~~~~~--~--~----------------~~~~~~~ll~~~gi~v~~-----~g----Ris~  387 (410)
                       +.+.   +++..   +..+.+.|.  +  +                +.++.++|+++ |+.+..     ++    ||++
T Consensus       407 -~~pg---~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~~lRi~~  481 (511)
T 3vp6_A          407 -NREE---FEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQPQGDKANFFRMVI  481 (511)
T ss_dssp             -SCTT---EEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEECC
T ss_pred             -cCCC---EEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEeCCceEEEEEEe
Confidence             7631   44433   455554441  1  1                11345566665 643322     22    8887


Q ss_pred             cC--CCcccHHHHHHHHHHHhhh
Q 015283          388 AG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       388 ~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++  .++++++.+++.|+++-+.
T Consensus       482 ~~~~~t~~di~~ll~~i~~~~~~  504 (511)
T 3vp6_A          482 SNPAATQSDIDFLIEEIERLGQD  504 (511)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHC-
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHh
Confidence            43  4789999999999987654

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.87  E-value=1.9e-21  Score=185.72  Aligned_cols=316  Identities=9%  Similarity=0.019  Sum_probs=190.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      +.++++..|       .+.+++.+.+++.+....  +..+.|+. .....++|+.+++++    |.+ ++++|++ .|+|
T Consensus        39 ~~~~~~~~~-------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~i~~-~t~g  105 (398)
T 2fyf_A           39 PRDGRFGSG-------PSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELF----SLP-DGYEVIL-GNGG  105 (398)
T ss_dssp             CSSCBCCSS-------SCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTCEEEE-EETC
T ss_pred             cCCccccCC-------CCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEE-eCCc
Confidence            345666644       234578999888763211  11122211 123467777777775    322 1346543 2799


Q ss_pred             hhhHHHHHHHHHHHhCCCCEEEEcCCCCcc-hhhhhhhC--CCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283          111 GTGSLRLAAALIERYFPGAKVLISSPTWGN-HKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG  187 (410)
Q Consensus       111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~  187 (410)
                      |++++.+++  ...+.+| .+++..+.|.. ....+...  |.+++.++..  +++..+. .    +.   +++++++++
T Consensus       106 ~t~al~~~~--~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-~----i~---~~~~~v~~~  172 (398)
T 2fyf_A          106 ATAFWDAAA--FGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-Q----TD---PSVDVIAWA  172 (398)
T ss_dssp             HHHHHHHHH--HHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-C----CC---TTCSEEEEE
T ss_pred             hhHHHHHHH--HHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-c----cc---CCCCEEEEe
Confidence            999999984  3336676 22233333321 12234445  7888888873  3333332 1    22   356677778


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283          188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM  267 (410)
Q Consensus       188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l  267 (410)
                      +|+||||.+++.+++.++      +|+++|+|++|..+...   .   .+    .  ..++++.|+||.+|++| ++||+
T Consensus       173 ~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~---~---~~----~--~~di~~~s~sK~~~~~g-g~g~l  233 (398)
T 2fyf_A          173 HNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP---V---DI----A--ETDAYYFAPQKNFASDG-GLWLA  233 (398)
T ss_dssp             SEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC---C---CG----G--GCSEEEECTTSTTCSCS-SEEEE
T ss_pred             CcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc---c---Cc----c--cCcEEEEecCcccCCCC-ceEEE
Confidence            999999999998887765      89999999998765521   1   11    1  13578899999999875 58997


Q ss_pred             EEEeCCchhHHHHHHHH----------------Hhh-ccCcccCCChhHHHHHHHHhCChhhHHHHHHH--HHHHHHHHH
Q 015283          268 NVVCSSSDLAARVKSQL----------------KRL-ARPMYSNPPVHGARIVANVVGNPALFDEWKAE--MEMMAGRIK  328 (410)
Q Consensus       268 ~~~~~~~~~~~~~~~~~----------------~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~--~~~~~~~~~  328 (410)
                      ++   ++++++++....                ... ....+.+++..++.++...++.      +.+.  +++.+++++
T Consensus       234 ~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~  304 (398)
T 2fyf_A          234 IM---SPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDW------LVGNGGLDWAVKRTA  304 (398)
T ss_dssp             EE---CHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH------HHHHTSHHHHHHHHH
T ss_pred             EE---CHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHH------HHHccCHHHHHHHHH
Confidence            65   777766654321                000 0112233444444444434331      1122  567888899


Q ss_pred             HHHHHHHHHhhhccCCCCCccccc--C--CcceeeecC----CCH-HHHHHhhhcCcEEEcCC------C--eEEecC-C
Q 015283          329 NVRQKLFDSLSAKDKSGKDWSFIL--R--QIGMFSFTG----LNK-AQSDNMTNKWHVYMTKD------G--RISLAG-L  390 (410)
Q Consensus       329 ~~~~~l~~~l~~~~g~~~~~~~~~--~--~~~~~~~~~----~~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~  390 (410)
                      ++++++.+.|+ +++  + +++..  +  .+++++|+.    .+. ++.++|.+ .||.+.++      +  ||++.. .
T Consensus       305 ~~~~~l~~~L~-~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~g~~~~~~~~iRis~~~~~  379 (398)
T 2fyf_A          305 DSSQRLYSWAQ-ERP--Y-TTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAV  379 (398)
T ss_dssp             HHHHHHHHHHH-HST--T-EEESCCSGGGBCSSEEEEEECTTSCHHHHHHHHHH-TTCBCCSCCTTTCSSEEEEECCTTS
T ss_pred             HHHHHHHHHHH-HcC--C-ceeccCChhhcCCcEEEEECCCCCCHHHHHHHHHH-CCcEEecCcccCCCCEEEEEecCCC
Confidence            99999999998 772  1 34442  3  344366553    344 44566665 59999764      2  999874 4


Q ss_pred             CcccHHHHHHHHHHHhhh
Q 015283          391 SLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~  408 (410)
                      +++++++++++|++++++
T Consensus       380 t~e~i~~~~~~l~~~l~~  397 (398)
T 2fyf_A          380 EPDDVSALTECVDWVVER  397 (398)
T ss_dssp             CHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            899999999999999875

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.87  E-value=1.3e-20  Score=179.54  Aligned_cols=216  Identities=16%  Similarity=0.101  Sum_probs=150.5

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-----hhCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-----NDAR  149 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-----~~~g  149 (410)
                      +.....++++.++++...        +..++  +++|++|+..+   +..+.+||+|++++|+|.+....+     ...|
T Consensus        65 ~~p~~~~l~~~la~l~g~--------~~~~~--~~sG~~Ai~~~---~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g  131 (400)
T 3nmy_A           65 HNPTRFAYERCVAALEGG--------TRAFA--FASGMAATSTV---MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAG  131 (400)
T ss_dssp             CCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH---HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHC
T ss_pred             CCHHHHHHHHHHHHHhCC--------CCEEE--ecCHHHHHHHH---HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcC
Confidence            345567899999998532        24555  67889998874   445679999999999998655543     3458


Q ss_pred             CCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC
Q 015283          150 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS  229 (410)
Q Consensus       150 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~  229 (410)
                      .+++.++.       .|++.+++.+++   +++++++++|+||||.+.+   +++|+++|++||+++|+|++|...... 
T Consensus       132 ~~~~~v~~-------~d~~~l~~~i~~---~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~-  197 (400)
T 3nmy_A          132 LDFSFVDL-------TDPAAFKAAIRA---DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ-  197 (400)
T ss_dssp             CEEEEECT-------TSHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC-
T ss_pred             eEEEEECC-------CCHHHHHHHhcc---CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence            88888776       278999998875   7788888999999999886   778888899999999999998632211 


Q ss_pred             CCCchhHhHHHhhcCCcEEEEecccccccccCCCcce-EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283          230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA-MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~  308 (410)
                         .  ++     ....++++.|+||.++.+|.++|+ + ++++++++++++.....    ......+...+.++...++
T Consensus       198 ---~--~~-----~~g~div~~S~sK~l~g~g~~~gG~~-vv~~~~~~~~~l~~~~~----~~g~~~~~~~a~~~l~~l~  262 (400)
T 3nmy_A          198 ---R--PL-----SLGADLVVHSATKYLNGHSDMVGGIA-VVGDNAELAEQMAFLQN----SIGGVQGPFDSFLALRGLK  262 (400)
T ss_dssp             ---C--GG-----GGTCSEEEEETTTTTTCSSSCCCEEE-EECSCHHHHHHHHHHHH----HHCCBCCHHHHHHHHHHHT
T ss_pred             ---C--hh-----hcCCcEEEecCccccCCCCCcceeEE-EEeCCHHHHHHHHHHHH----hcCCCCCHHHHHHHHHhHh
Confidence               0  11     113578899999999988888888 4 35667776666654332    1122344444444444444


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ..          ....++..++...+.+.|+ +.+
T Consensus       263 ~l----------~~r~~~~~~~a~~l~~~L~-~~p  286 (400)
T 3nmy_A          263 TL----------PLRMRAHCENALALAQWLE-THP  286 (400)
T ss_dssp             TH----------HHHHHHHHHHHHHHHHHHT-TCT
T ss_pred             HH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence            32          2344555667777777777 554

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.87  E-value=1.4e-21  Score=189.03  Aligned_cols=282  Identities=11%  Similarity=0.019  Sum_probs=168.4

Q ss_pred             cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC
Q 015283           72 EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP  151 (410)
Q Consensus        72 ~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~  151 (410)
                      .|.+.....++++.+++ +.    .   .+.+++  ++|+|+++.++.  ...+.+||+|+++.|+|.++...+...|++
T Consensus        52 ~~~~~~~~~~~~~~la~-~g----~---~~~v~~--~~G~t~a~~~~~--~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~  119 (446)
T 2x3l_A           52 LHHPEEVILKSMKQVEK-HS----D---YDGYFL--VNGTTSGILSVI--QSFSQKKGDILMARNVHKSVLHALDISQQE  119 (446)
T ss_dssp             TTSCSSHHHHHHHHHCS-CT----T---EEEEEE--SSHHHHHHHHHH--HTTTTSSSCEEECTTCCHHHHHHHHHHTCC
T ss_pred             ccCcchHHHHHHHHHHh-cC----C---CceEEE--eCCHHHHHHHHH--HHhcCCCCEEEEecCccHHHHHHHHHcCCe
Confidence            34455566777777777 42    2   256888  999999999983  334679999999999999999999999999


Q ss_pred             ccceeeecCCC----cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC-CC
Q 015283          152 WSEYRYYDPKT----VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FA  226 (410)
Q Consensus       152 ~~~v~~~~~~~----~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~-~~  226 (410)
                      ++.++....++    +.+|++.+   +.   ++++++++++ .|+||.+.+   +++|+++|++||+++|+||+|.. +.
T Consensus       120 ~~~v~~~~~~~~~~~~~~d~~~l---~~---~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~  189 (446)
T 2x3l_A          120 GHFIETHQSPLTNHYNKVNLSRL---NN---DGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFG  189 (446)
T ss_dssp             EEECEEEECTTTSSEEEEEC-------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTT
T ss_pred             EEEEeCeeccccCcCCCCCHHHH---cC---CCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhc
Confidence            99988732232    56788877   22   2455566566 566999877   56888889999999999999886 32


Q ss_pred             CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHH--HHHHHHHhhccCcccCCChhHHHHH-
Q 015283          227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA--RVKSQLKRLARPMYSNPPVHGARIV-  303 (410)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a-  303 (410)
                      +.+.   ....   ... +..+++.|+||.++ ++.++||+++   +++.++  .+.......   ....++.....++ 
T Consensus       190 f~~~---~~~~---~~~-g~Di~~~S~~K~l~-~~~g~g~l~~---~~~~i~~~~~~~~~~~~---~~~s~~~~~~aal~  255 (446)
T 2x3l_A          190 LQGF---PDST---LNY-QADYVVQSFHKTLP-ALTMGSVLYI---HKNAPYRENIIEYLSYF---QTSSPSYLIMASLE  255 (446)
T ss_dssp             STTS---CCCG---GGG-TCSEEEECHHHHSS-SCTTCEEEEE---ETTCTTHHHHHHHHHHH---SCSSCCHHHHHHHH
T ss_pred             cCCC---CCCh---HHc-CCCEEEECCccccc-cccccEEEEE---cCCcCCHHHHHHHHHHH---cCCCchHHHHHHHH
Confidence            3211   1111   111 23488999999654 2345799854   344332  333222211   1122332221111 


Q ss_pred             --HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec---CCCHHH-HHHhhhcCcE
Q 015283          304 --ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT---GLNKAQ-SDNMTNKWHV  377 (410)
Q Consensus       304 --~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~-~~~ll~~~gi  377 (410)
                        ...+....        .++..++.+++++.+.+     .+    +.+..+..+.++|+   +.+... .+.|.+ +||
T Consensus       256 ~a~~~l~~~g--------~~~~~~~~~~l~~~l~~-----~g----~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~-~GI  317 (446)
T 2x3l_A          256 SAAQFYKTYD--------STLFFAKRAQLIECLEN-----KG----FEMLQVDDPLKLLIKYEGFTGHDIQNWFMN-AHI  317 (446)
T ss_dssp             HHHHHHHHCC--------CHHHHHHHHHHHHHHHH-----HT----CEEEECSSTTEEEEECTTSCHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHhC--------HHHHHHHHHHHHHHHHH-----cC----CEECcCCCCeEEEEEeCCcCHHHHHHHHHH-CCC
Confidence              11111100        01133333444443333     23    23333333334555   334444 555555 599


Q ss_pred             EEc-CCC---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          378 YMT-KDG---RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       378 ~v~-~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+. ++.   |++++. .+++++ +++++|+++++.
T Consensus       318 ~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~  352 (446)
T 2x3l_A          318 YLELADDYQALAILPLWHHDDTY-LFDSLLRKIEDM  352 (446)
T ss_dssp             EESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred             EEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHHh
Confidence            998 553   999864 388999 999999998764

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.86  E-value=4.5e-21  Score=186.87  Aligned_cols=338  Identities=12%  Similarity=-0.009  Sum_probs=205.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc---CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|.+-...|+.  +|.+.+++.+++..   .+...|.. ....++++++++.+.+....  ..+++.+  ++|
T Consensus        63 ~~ylD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~~v~f--~~s  135 (472)
T 1ohv_A           63 NRMLDLYSQISSIPIGYS--HPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMSQLIT--MAC  135 (472)
T ss_dssp             CEEEESSHHHHTCSSCBT--CHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCCEEEE--ESS
T ss_pred             CEEEECCCCHhhcccCCC--CHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcCEEEE--eCC
Confidence            467899888773445553  68999998887532   11122322 34568999999876554321  3578999  999


Q ss_pred             hhhHHHHHHHHHHHh-----------------------CCC---CEEEEcCCCCcchhhhhh-hCCCCc-----------
Q 015283          111 GTGSLRLAAALIERY-----------------------FPG---AKVLISSPTWGNHKNIFN-DARVPW-----------  152 (410)
Q Consensus       111 gt~a~~~~~~~~~~~-----------------------~~g---d~Vl~~~p~y~~~~~~~~-~~g~~~-----------  152 (410)
                      |++|++.++++...+                       .+|   ++|++.+++|.++..... ..|...           
T Consensus       136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~  215 (472)
T 1ohv_A          136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW  215 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred             chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence            999999998766422                       146   899999999987755432 333211           


Q ss_pred             cceeeecC--C---C--c-----ccChhhHHHHHhcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcc
Q 015283          153 SEYRYYDP--K---T--V-----GLDFEGMIADIKAAP---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIP  216 (410)
Q Consensus       153 ~~v~~~~~--~---~--~-----~~d~~~l~~~i~~~~---~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~l  216 (410)
                      ..++....  .   .  +     ..|++.+++.+.+..   .+++++++.+.+|+||. ..+.+.+++|.++|++||+++
T Consensus       216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll  295 (472)
T 1ohv_A          216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF  295 (472)
T ss_dssp             CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred             cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence            11111000  0   0  0     136788888886521   15677777777888997 567888999999999999999


Q ss_pred             cccccCCCCCCCCCCCchhHhHHHhhcC--CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccC
Q 015283          217 FFDVAYQGFASGSLDNDASSVRLFATRG--MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSN  294 (410)
Q Consensus       217 i~Deay~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (410)
                      |+||+|.+++..+   ..+.+..+ +..  .+   +.||||.+ ++|   ||.  +  ++++    .. ........+.+
T Consensus       296 i~DEv~~g~g~~g---~~~~~~~~-gv~~~~D---i~t~sK~~-l~G---G~~--~--~~~~----~~-~~~~~~~~T~~  355 (472)
T 1ohv_A          296 LVDEVQTGGGSTG---KFWAHEHW-GLDDPAD---VMTFSKKM-MTG---GFF--H--KEEF----RP-NAPYRIFNTWL  355 (472)
T ss_dssp             EEECTTTTTTTTS---SSSGGGGG-CCSSCCS---EEEECGGG-SSE---EEE--E--CGGG----SC-SSSSSSCCSSS
T ss_pred             EEeCcccCCCCCC---Cchhcccc-CCCCCCC---EEEEcccc-ccC---Ccc--C--chhh----cc-cccccccCccC
Confidence            9999998877432   11222111 111  22   34899995 334   664  2  4442    11 11111122223


Q ss_pred             CChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceeeecCCC-----HHH
Q 015283          295 PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGLN-----KAQ  367 (410)
Q Consensus       295 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~-----~~~  367 (410)
                      .+.+++.++...|+.-      .+  +...++++++++++.+.|+ ++.  .+..+....+. |.+.++.+.     .++
T Consensus       356 ~~~~~~aaa~aal~~~------~~--~~~~~~~~~~~~~l~~~L~-~l~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~  425 (472)
T 1ohv_A          356 GDPSKNLLLAEVINII------KR--EDLLSNAAHAGKVLLTGLL-DLQARYPQFISRVRGR-GTFCSFDTPDESIRNKL  425 (472)
T ss_dssp             SCHHHHHHHHHHHHHH------HH--TTHHHHHHHHHHHHHHHHH-HHHHHCTTTCEEEEEE-TTEEEEECSSHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHH------Hh--CCHHHHHHHHHHHHHHHHH-HHHhhCCCcEEeecCC-ceEEEEEeCChhHHHHH
Confidence            4555555554443310      11  2345677777777777776 552  11102223344 444444442     235


Q ss_pred             HHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          368 SDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       368 ~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +.++++ +||.+.|+|    ||+++. .+++++++++++|++++.++
T Consensus       426 ~~~l~~-~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~  471 (472)
T 1ohv_A          426 ISIARN-KGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADF  471 (472)
T ss_dssp             HHHHHH-TTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHH-CCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            667766 699999864    886553 48999999999999998765

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.86  E-value=6.1e-20  Score=176.44  Aligned_cols=158  Identities=20%  Similarity=0.096  Sum_probs=122.5

Q ss_pred             cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCc
Q 015283           77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPW  152 (410)
Q Consensus        77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~  152 (410)
                      ....++++.+++++...       +.++   +++|++|+..+..  ..+.+||+|+++.++|.++...+    +..|.++
T Consensus        58 ~~~~~l~~~la~~~g~~-------~~v~---~~sGt~A~~~~l~--~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~  125 (421)
T 2ctz_A           58 PTVDVLEKRLAALEGGK-------AALA---TASGHAAQFLALT--TLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEV  125 (421)
T ss_dssp             HHHHHHHHHHHHHHTCS-------EEEE---ESSHHHHHHHHHH--HHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEE
T ss_pred             hHHHHHHHHHHHHhCCC-------ceEE---ecCHHHHHHHHHH--HHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEE
Confidence            34589999999997432       2344   4667999998843  33779999999999999887665    6788888


Q ss_pred             cce-eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          153 SEY-RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       153 ~~v-~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      +.+ +.   +    |++++++.+++   +++++++++|+||||.+.+   +++|.++|+++|+++|+|++|..++..   
T Consensus       126 ~~~~~~---~----d~~~l~~~i~~---~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~---  189 (421)
T 2ctz_A          126 RFTSRE---E----RPEEFLALTDE---KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYL---  189 (421)
T ss_dssp             EECCTT---C----CHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTS---
T ss_pred             EEECCC---C----CHHHHHHhhcc---CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccc---
Confidence            887 65   1    78999998875   7788888999999999887   778888899999999999998344432   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      ....      . ...++++.|+||.++.+|.|+|++++
T Consensus       190 ~~~~------~-~~~Di~~~s~~K~l~~~g~~~G~~~~  220 (421)
T 2ctz_A          190 LRPL------A-WGAALVTHSLTKWVGGHGAVIAGAIV  220 (421)
T ss_dssp             CCGG------G-GTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred             CCcc------c-cCCeEEEECCcccccCCCCcEEEEEE
Confidence            1111      1 13568899999999999999999854

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.85  E-value=2.3e-19  Score=171.46  Aligned_cols=170  Identities=12%  Similarity=0.056  Sum_probs=127.4

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~  150 (410)
                      +.....++++.+++++..        ++.++  ++||++|+.++  +...+.+||+|+++.+.|.+....+    +..|.
T Consensus        80 ~~p~~~~le~~lA~l~g~--------~~~i~--~ssGt~Ai~~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~  147 (415)
T 2fq6_A           80 GTLTHFSLQQAMCELEGG--------AGCVL--FPCGAAAVANS--ILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGV  147 (415)
T ss_dssp             CCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred             CCchHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence            445567899999999632        23455  68999999887  3444679999999999998876543    45688


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASG  228 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~  228 (410)
                      ++..++.       .|++++++.+++   +++++++++|+||||.+.+   +++|+++|++  +|+++|+|++|......
T Consensus       148 ~v~~v~~-------~d~~~le~ai~~---~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~  214 (415)
T 2fq6_A          148 TTSWFDP-------LIGADIVKHLQP---NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF  214 (415)
T ss_dssp             EEEEECT-------TCGGGGGGGCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS
T ss_pred             EEEEECC-------CCHHHHHHhhcc---CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC
Confidence            8777764       278889888874   6888888999999999875   6678888999  99999999998754321


Q ss_pred             CCCCchhHhHHHhhcCCcEEEEecccccccccCCC-cceEEEEeCCchhHHHHHHH
Q 015283          229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVKSQ  283 (410)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r-~G~l~~~~~~~~~~~~~~~~  283 (410)
                          .  ++     ..+.++++.|+||.++.+|.+ +||++.   ++++++++...
T Consensus       215 ----~--p~-----~~g~Div~~S~sK~lg~~g~~~~G~l~~---~~~~~~~l~~~  256 (415)
T 2fq6_A          215 ----K--AL-----DFGIDVSIQAATKYLVGHSDAMIGTAVC---NARCWEQLREN  256 (415)
T ss_dssp             ----C--GG-----GGTCSEEEEETTTTTTCSSSCCCEEEEE---CTTTHHHHHHH
T ss_pred             ----C--cc-----ccCCeEEEEeCccccCCCCCceEEEEEe---CHHHHHHHHHH
Confidence                1  11     123578899999999988866 477643   56666666553

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.85  E-value=1.1e-20  Score=184.73  Aligned_cols=328  Identities=9%  Similarity=-0.067  Sum_probs=210.9

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC--------CceEEEecCChhhHHHHHHHHHHHh
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE--------QRVATVQGLSGTGSLRLAAALIERY  125 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~--------~~i~~~~t~ggt~a~~~~~~~~~~~  125 (410)
                      +..+.+.+...++... ..|....+..++++.+++|+.+.+|.+...        ...++  |+|||+++..+....+..
T Consensus        92 ~~~~~~~~~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~--~~ggt~an~~al~~ar~~  168 (481)
T 4e1o_A           92 PSLLGDMLADAINCLG-FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVL--QSTVSESTLIALLAARKN  168 (481)
T ss_dssp             HHHHHHHHHHHHCCCC-SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEE--ESCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCccc-CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEE--eCchHHHHHHHHHHHHHH
Confidence            4556666777776544 678777889999999999987776664322        24567  899999998875444321


Q ss_pred             -----------------CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEE
Q 015283          126 -----------------FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL  185 (410)
Q Consensus       126 -----------------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii  185 (410)
                                       .+++.|++++++|..+...+...|.+++.+|+  ++++.+|+++|++.+.+.   +..+.+++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~--~~~~~~d~~~Le~~i~~~~~~g~~~~~vv  246 (481)
T 4e1o_A          169 KILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPV--DDNFSLRGEALQKAIEEDKQRGLVPVFVC  246 (481)
T ss_dssp             HHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECC--CTTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEc--CCCCcCCHHHHHHHHHHHHhCCCCcEEEE
Confidence                             25789999999999999988888999999987  467889999999998752   12266677


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCc
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      .+.++|+||.   .+++++|+++|++||+++++|++|.......   +  ..+... .....+.+..+.+|.++.| ...
T Consensus       247 ~~~~~t~~G~---id~l~~I~~la~~~~~~lhvDaA~g~~~~~~---~--~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~  317 (481)
T 4e1o_A          247 ATLGTTGVCA---FDCLSELGPICAREGLWLHIDAAYAGTAFLC---P--EFRGFLKGIEYADSFTFNPSKWMMVH-FDC  317 (481)
T ss_dssp             EEBSCTTTCC---BCCHHHHHHHHHHHTCEEEEECTTGGGGGGS---G--GGGGGGTTGGGCSEEEECHHHHSSCC-SSC
T ss_pred             EecCCCCCcC---cCCHHHHHHHHHHcCCeEEeehhhHHHHHhC---h--hhHHHhcCcccCCEEEEChHHhcCCC-Cce
Confidence            7889999998   4678889999999999999999987654210   1  111111 1112355667999998765 446


Q ss_pred             ceEEEEeCCchhHHHHHHHHHhhccCc--------------cc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          265 GAMNVVCSSSDLAARVKSQLKRLARPM--------------YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      |++  ..+++....+.......+....              .+ ....+.+.++...+.        .+.++++.++..+
T Consensus       318 g~l--~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g--------~~g~~~~~~~~~~  387 (481)
T 4e1o_A          318 TGF--WVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG--------VKNLQAHVRHGTE  387 (481)
T ss_dssp             EEE--EESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH--------HHHHHHHHHHHHH
T ss_pred             EEE--EEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH--------HHHHHHHHHHHHH
Confidence            776  4445442221100000011000              00 011223333333321        2345677888899


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCC------CHHHHHHhhhcCcEEEcCC---C----eEEecC--CCccc
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------NKAQSDNMTNKWHVYMTKD---G----RISLAG--LSLAK  394 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~v~~~---g----Ris~~~--~~~~~  394 (410)
                      +++++.+.|+ +.+.   +++..+....++++.+      +.++.+++.++..+++.|.   |    ||++.+  .++++
T Consensus       388 ~a~~l~~~L~-~~~g---~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~d  463 (481)
T 4e1o_A          388 MAKYFESLVR-NDPS---FEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDD  463 (481)
T ss_dssp             HHHHHHHHHH-TCTT---EECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHH
T ss_pred             HHHHHHHHHh-cCCC---eEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHH
Confidence            9999999998 7631   4544333333333322      2345666666533444432   3    998764  26789


Q ss_pred             HHHHHHHHHHHhhhc
Q 015283          395 CEYLADAIIDSYHNV  409 (410)
Q Consensus       395 i~~~~~~l~~~l~~~  409 (410)
                      +++++++|+++++++
T Consensus       464 i~~~~~~i~~~~~~l  478 (481)
T 4e1o_A          464 ILRDWNLIRDAATLI  478 (481)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987653

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.84  E-value=1.3e-19  Score=178.71  Aligned_cols=325  Identities=14%  Similarity=0.046  Sum_probs=198.5

Q ss_pred             cHHHHH-HHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-----C-
Q 015283           54 LDVVKK-AENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-----F-  126 (410)
Q Consensus        54 ~~~v~~-a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-----~-  126 (410)
                      +..+.. .+....+.. ...|....+..++.+.+.+++.+..|.+  .+++++  ++|||+|+.++....+..     . 
T Consensus       121 ~~~~~~~~l~~~~n~~-~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~--t~ggtea~~~al~~ar~~~~~~~~~  195 (515)
T 2jis_A          121 PHALAGRIITESLNTS-QYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIF--CPGGSISNMYAVNLARYQRYPDCKQ  195 (515)
T ss_dssp             HHHHHHHHHHHHHCCC-TTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEE--ESSHHHHHHHHHHHHHHHHCTTHHH
T ss_pred             HHHHHHHHHHHHhccC-CCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEE--cCCcHHHHHHHHHHHHHHHhhHHhh
Confidence            444443 344433332 2456555565566666555554444443  578888  999999988875444321     2 


Q ss_pred             CCC------EEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCC
Q 015283          127 PGA------KVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTG  194 (410)
Q Consensus       127 ~gd------~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG  194 (410)
                      +||      .|+++++.|..+...++..|.   +++.+|+  ++++.+|++.|++.+.+.   +.++.++++++|+||||
T Consensus       196 ~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG  273 (515)
T 2jis_A          196 RGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKA--DERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLG  273 (515)
T ss_dssp             HCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB--CTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTC
T ss_pred             cCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEec--CCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCC
Confidence            576      899999999999988888887   7888887  346789999999998751   22477888899999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .+.+   +++|+++|++||+++++|++|..+....   +.... .+......++++.|++|.++.| .++|+++  ++++
T Consensus       274 ~i~~---l~~I~~la~~~g~~l~vD~a~~~~~~~~---~~~~~-~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~--~~~~  343 (515)
T 2jis_A          274 AFDP---LEAIADVCQRHGLWLHVDAAWGGSVLLS---QTHRH-LLDGIQRADSVAWNPHKLLAAG-LQCSALL--LQDT  343 (515)
T ss_dssp             CBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGC---TTTGG-GGTTGGGCSEEEECTTSTTCCC-SCCEEEE--ESCC
T ss_pred             CccC---HHHHHHHHHHcCCeEEEehhhhhHHHhC---hhhHh-hcCCCccCCEEEECcccccCCC-CCeeEEE--EeCh
Confidence            9654   7788888999999999999988776421   11110 1111113457888999998744 5689984  4555


Q ss_pred             -hhHHHHH----HHHHhhcc--------Cccc-----CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          275 -DLAARVK----SQLKRLAR--------PMYS-----NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       275 -~~~~~~~----~~~~~~~~--------~~~~-----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                       ++.++..    .++.....        ..+.     ....+.+.++...+.        .+.+++..++..++++++.+
T Consensus       344 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg--------~~g~~~~~~~~~~~a~~l~~  415 (515)
T 2jis_A          344 SNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG--------DQGLERRIDQAFVLARYLVE  415 (515)
T ss_dssp             SCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHH
Confidence             4444321    11110000        0000     001222222222221        23356778888899999999


Q ss_pred             HhhhccCCCCCccccc-CCcceeeec--C--C-----CHH-----------HHHHhhhcCcEEE-c----CC--C--eEE
Q 015283          337 SLSAKDKSGKDWSFIL-RQIGMFSFT--G--L-----NKA-----------QSDNMTNKWHVYM-T----KD--G--RIS  386 (410)
Q Consensus       337 ~l~~~~g~~~~~~~~~-~~~~~~~~~--~--~-----~~~-----------~~~~ll~~~gi~v-~----~~--g--Ris  386 (410)
                      .|+ +.+.   +++.. +..+.+.|.  +  +     ..+           ....+.+ .|+.. .    ++  +  |++
T Consensus       416 ~L~-~~~g---~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~-~G~~~~~~~~~~~~~~~lRis  490 (515)
T 2jis_A          416 EMK-KREG---FELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVK-EGSMMIGYQPHGTRGNFFRVV  490 (515)
T ss_dssp             HHH-TSTT---EEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHH-HTSCEEEEEEETTEEEEEEEE
T ss_pred             HHh-cCCC---EEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHh-cCCEEEEEEEECCceEEEEEE
Confidence            998 7631   34332 333444441  1  0     011           2344544 47543 2    23  2  999


Q ss_pred             ec-C-CCcccHHHHHHHHHHHhhh
Q 015283          387 LA-G-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       387 ~~-~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      ++ . .|+++++++++.|++++++
T Consensus       491 ~~~~~~t~edid~~~~~l~~~~~~  514 (515)
T 2jis_A          491 VANSALTCADMDFLLNELERLGQD  514 (515)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             eCCCCCCHHHHHHHHHHHHHHHhh
Confidence            84 2 3889999999999998765

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.84  E-value=2.6e-19  Score=170.47  Aligned_cols=152  Identities=15%  Similarity=0.123  Sum_probs=118.1

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH-----Hh
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-----RY  125 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~-----~~  125 (410)
                      +.+++.+.+++.+.+...   .|.+..+..++++++++++..        ++.++  +++|++++..+...+.     .+
T Consensus        11 ~~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~sGt~a~~~al~~~~~~~~~~~   77 (390)
T 3b8x_A           11 STWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFGS--------KYAVM--VSSGSTANLLMIAALFFTKKPRL   77 (390)
T ss_dssp             CCCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHHHHHTTSSSSCSC
T ss_pred             CCCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHCC--------CcEEE--ECCHHHHHHHHHHHHHhhhhcCC
Confidence            455788999988877542   355677899999999999743        24555  7888899888732221     15


Q ss_pred             CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283          126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI  205 (410)
Q Consensus       126 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i  205 (410)
                      .+||+|+++.|+|..+...+...|++++.+++. ++++.+|++++++.+++   ++++++++   |++|..   .++++|
T Consensus        78 ~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~~~---~~~g~~---~~~~~i  147 (390)
T 3b8x_A           78 KKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDID-INTLNIDIESLKEAVTD---STKAILTV---NLLGNP---NNFDEI  147 (390)
T ss_dssp             CTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC-TTTCSBCHHHHHHHCCT---TEEEEEEE---CGGGCC---CCHHHH
T ss_pred             CCcCEEEECCCCcHHHHHHHHHcCCEEEEEecC-ccccCcCHHHHHHHhCc---CCeEEEEE---CCccCh---hhHHHH
Confidence            689999999999999999999999999999884 33578999999999875   56666654   355653   578888


Q ss_pred             HHHHHHcCCcccccccCCCC
Q 015283          206 ADVIQEKNHIPFFDVAYQGF  225 (410)
Q Consensus       206 ~~~~~~~~~~li~Deay~~~  225 (410)
                      .++|+++|+++|+|++|...
T Consensus       148 ~~l~~~~~~~li~D~a~~~g  167 (390)
T 3b8x_A          148 NKIIGGRDIILLEDNCESMG  167 (390)
T ss_dssp             HHHHTTSCCEEEEECTTCTT
T ss_pred             HHHHHHcCCEEEEECcCccc
Confidence            88999999999999998743

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.84  E-value=2.5e-20  Score=181.66  Aligned_cols=327  Identities=11%  Similarity=-0.002  Sum_probs=206.5

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-------CceEEEecCChhhHHHHHHHHHHHh-
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-------QRVATVQGLSGTGSLRLAAALIERY-  125 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-------~~i~~~~t~ggt~a~~~~~~~~~~~-  125 (410)
                      +..+.+.+...++... ..|....+..++++++++|+.+..|.+.+.       ...++  |+|||+++.++....+.. 
T Consensus        87 ~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~--t~ggt~anl~al~~ar~~~  163 (475)
T 3k40_A           87 PAIVADMLSGAIACIG-FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVI--QGTASESTLVALLGAKAKK  163 (475)
T ss_dssp             HHHHHHHHHHHHCCCS-SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEE--ESCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCccc-cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEE--cCchHHHHHHHHHHHHHHH
Confidence            3455566666665543 667777888999999999987777764321       25677  899999988774443221 


Q ss_pred             ----------------CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEe
Q 015283          126 ----------------FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLH  186 (410)
Q Consensus       126 ----------------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~  186 (410)
                                      .+++.|++++++|..+...+...|.+++.+|+  ++++ +|+++|++.+.+.   +..+.+++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~--d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~  240 (475)
T 3k40_A          164 LKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQS--ENHR-MRGAALEKAIEQDVAEGLIPFYAVV  240 (475)
T ss_dssp             HHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECC--BTTB-CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEEC--CCCC-cCHHHHHHHHHHHHHCCCccEEEEE
Confidence                            13468999999999999999999999999998  3456 9999999998752   122566777


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCcc
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      +.++|+||.+   +++++|+++|++||+++++|++|......   .+  ..+... .....+.+..+.+|.++.| ..+|
T Consensus       241 ~~~~t~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~~---~~--~~~~~~~gi~~~Ds~~~~~hK~l~~p-~g~g  311 (475)
T 3k40_A          241 TLGTTNSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAFI---CP--EYRHLMKGIESADSFNFNPHKWMLVN-FDCS  311 (475)
T ss_dssp             EBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGG---SG--GGGGGGTTGGGCSEEEECHHHHSSCC-SSCE
T ss_pred             EecCCCCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHHh---CH--hhHHHhcCcccCCEEEECchhccCCC-CceE
Confidence            8899999994   67888899999999999999998764321   00  111111 1112356778999988644 5567


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccC----------ccc--CC---ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARP----------MYS--NP---PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~--~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      ++  ..++++...+.......+...          .+.  ..   ..+.+.++...+.        .+.++++.++..++
T Consensus       312 ~l--~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g--------~~g~~~~~~~~~~~  381 (475)
T 3k40_A          312 AM--WLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG--------VENLQAHIRRHCNF  381 (475)
T ss_dssp             EE--EESSGGGC---------------------------CCCGGGTHHHHHHHHHHHH--------HHHHHHHHHHHHHH
T ss_pred             EE--EEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh--------HHHHHHHHHHHHHH
Confidence            77  445554322111111111100          000  00   1222222222221        23456788888999


Q ss_pred             HHHHHHHhhhccCCCCCcccccC-Ccceeee--cCC---CHHHHHHhhhcCcEEEcCC---C----eEEecC--CCcccH
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILR-QIGMFSF--TGL---NKAQSDNMTNKWHVYMTKD---G----RISLAG--LSLAKC  395 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~-~~~~~~~--~~~---~~~~~~~ll~~~gi~v~~~---g----Ris~~~--~~~~~i  395 (410)
                      ++++.+.|+ +++.   +++..+ ..++..|  .+.   +.++.+++.++.++++.|.   |    |+++.+  .+++++
T Consensus       382 a~~l~~~L~-~~~g---~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di  457 (475)
T 3k40_A          382 AKQFGDLCV-ADSR---FELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDM  457 (475)
T ss_dssp             HHHHHHHHH-HSTT---EEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHH
T ss_pred             HHHHHHHHh-cCCC---EEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHH
Confidence            999999998 7731   444433 3333322  122   2345667766544444432   3    999764  378999


Q ss_pred             HHHHHHHHHHhhhc
Q 015283          396 EYLADAIIDSYHNV  409 (410)
Q Consensus       396 ~~~~~~l~~~l~~~  409 (410)
                      ++++++|+++.+++
T Consensus       458 ~~~~~~i~~~~~~~  471 (475)
T 3k40_A          458 EYSWKEVSAAADEM  471 (475)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999987653

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.83  E-value=1.1e-19  Score=173.96  Aligned_cols=331  Identities=13%  Similarity=0.055  Sum_probs=198.6

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.... +...+..-..++.+.+++.+..       .+.+.+  +++|++
T Consensus        87 ~~ylD~~~g~~~~~lGH~--hp~v~~Av~~q~~~~~-~~~~~~~~~~~lae~l~~~~p~-------~~~v~f--~~SGsE  154 (454)
T 4ao9_A           87 HRYADFIAEYTAGVYGHS--APEIRDAVIEAMQGGI-NLTGHNLLEGRLARLICERFPQ-------IEQLRF--TNSGTE  154 (454)
T ss_dssp             CEEEESSGGGGTTTTCSC--CHHHHHHHHHHHHTCS-CCCSEESSHHHHHHHHHHHSTT-------CSEEEE--ESSHHH
T ss_pred             CEEEEccccHHhhcccCC--CHHHHHHHHHHHhcCC-CccCCcHHHHHHHHHHHHhCCC-------CCEEEE--eCchHH
Confidence            467888777543455654  5899999988886543 2222333455788888887532       478989  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCCCccc--eeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARVPWSE--YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~--v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      |++.+.++.+.+...++|+..+.+|.+....... .+.....  +...+.    .|++.+++.+.++++...+|++...+
T Consensus       155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~----nd~~~l~~~l~~~~~~iAavIvEPv~  230 (454)
T 4ao9_A          155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY----NDAQTARAQIERHGPEIAVVLVEPMQ  230 (454)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT----TCHHHHHHHHHHTGGGEEEEEECSEE
T ss_pred             HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC----chHHHHHHHHhhcCCceEEEEecccc
Confidence            9999988887776668999999888765432221 1111111  111112    37889999998766667777766667


Q ss_pred             CCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          191 NPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       191 NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                      ...|.+.+ ++-|++|.++|++||+++|.||++.+ ..+    ..+.... .+-.++++   +++|.+| .|+.+|++.+
T Consensus       231 g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G----~~~a~e~-~gv~PDi~---t~gK~lg-gG~Piga~~~  300 (454)
T 4ao9_A          231 GASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLA----PHGLANK-LGIRSDLT---TLGKYIG-GGMSFGAFGG  300 (454)
T ss_dssp             STTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGS----TTCHHHH-HTCCCSEE---EEEGGGG-TTSSCEEEEE
T ss_pred             CCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCc----cccchhc-cCCCCcEE---EeccccC-CCCcceeeee
Confidence            77787654 55599999999999999999999763 211    1112212 22334554   6899998 7899999755


Q ss_pred             EeCCchhHHHHHHHHHhh-ccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---hcc
Q 015283          270 VCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS---AKD  342 (410)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---~~~  342 (410)
                         ++++.+.+....... ...+++ .+.++..++   ...+.++++           .++++++.++|.+.|+   ++.
T Consensus       301 ---~~ei~~~~~~~~~~~~h~~T~~-gnPla~AAala~L~~l~~~~~-----------~~~~~~~g~~l~~~L~~l~~~~  365 (454)
T 4ao9_A          301 ---RADVMALFDPRTGPLAHSGTFN-NNVMTMAAGYAGLTKLFTPEA-----------AGALAERGEALRARLNALCANE  365 (454)
T ss_dssp             ---CHHHHGGGCTTTCSCCCCCTTT-TCHHHHHHHHHHHHHTSCHHH-----------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHhhccCCccccCCCC-CCHHHHHHHHHHHHHHhccCh-----------hHHHHHHHHHHHHHHHHHHhhC
Confidence               777544432211111 122333 333333333   344555433           2333334444444333   023


Q ss_pred             CCCCCcccccCCcceee--ec-----------CCCH----HHHHHhhhcCcEEEcCCCeEEecC-CCcccHHHHHHHHHH
Q 015283          343 KSGKDWSFILRQIGMFS--FT-----------GLNK----AQSDNMTNKWHVYMTKDGRISLAG-LSLAKCEYLADAIID  404 (410)
Q Consensus       343 g~~~~~~~~~~~~~~~~--~~-----------~~~~----~~~~~ll~~~gi~v~~~gRis~~~-~~~~~i~~~~~~l~~  404 (410)
                      +...   .+...+.++.  |.           ..+.    .++..+++ .||++.|.+++.++. +|++||++++++|++
T Consensus       366 ~~~~---~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~Gv~~~p~~~~~~s~~~T~~dId~~l~al~~  441 (454)
T 4ao9_A          366 GVAM---QFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLN-EDIYSSPRGFVVLSLPLTDADIDRYVAAIGS  441 (454)
T ss_dssp             TBSC---EEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHH-TTEECCTTCEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCE---EEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHH-CCEEEcCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence            3211   1111222221  11           1122    23456666 599999999665432 599999999999999


Q ss_pred             Hhhhc
Q 015283          405 SYHNV  409 (410)
Q Consensus       405 ~l~~~  409 (410)
                      ++.++
T Consensus       442 ~l~~~  446 (454)
T 4ao9_A          442 FIGGH  446 (454)
T ss_dssp             HHHHS
T ss_pred             HHHhc
Confidence            98764

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.82  E-value=2.4e-19  Score=173.34  Aligned_cols=277  Identities=11%  Similarity=0.016  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCCccce
Q 015283           80 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVPWSEY  155 (410)
Q Consensus        80 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v  155 (410)
                      .++++.+++++    |.  +++++.+  +.|++.+.+.+...+ .+.+||+|++++++|+.+...++    ..|++++.+
T Consensus       111 ~~~~~~la~~~----g~--~~~~i~~--~~g~taa~ea~~~a~-~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v  181 (438)
T 1wyu_A          111 FEYQTMIAELA----GL--EIANASM--YDGATALAEGVLLAL-RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL  181 (438)
T ss_dssp             HHHHHHHHHHH----TS--SEECSCB--SSHHHHHHHHHHHHH-HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHh----CC--CccceEE--eCcHHHHHHHHHHHH-hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEE
Confidence            46666666664    32  2456777  888885555542222 35689999999999999876554    489999888


Q ss_pred             eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283          156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS  235 (410)
Q Consensus       156 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~  235 (410)
                      +.   +++.+|+++    +.   ++++++++++| ||||.+.   ++++|+++|+++|+++++|..-..++.  ...   
T Consensus       182 ~~---~~~~~d~~~----i~---~~t~~v~i~~p-n~tG~~~---~l~~i~~la~~~g~~vivd~d~~a~g~--~~~---  242 (438)
T 1wyu_A          182 PL---EGGRTPLPE----VG---EEVGAVVVQNP-NFLGALE---DLGPFAEAAHGAGALFVAVADPLSLGV--LKP---  242 (438)
T ss_dssp             CC---BTTBCCCCC----CC---TTEEEEEEESS-CTTSBCC---CHHHHHHHHHHTTCEEEEECCTTGGGT--BCC---
T ss_pred             cC---cCCccCHHH----hC---CCeEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEechhhccC--cCC---
Confidence            86   235677776    43   36788888889 9999976   577888889999999995532111221  101   


Q ss_pred             HhHHHhhcCCcEEEEecccccc----cccCCCcceEEEEeCCchhHHHHHHHH-----------------------Hhhc
Q 015283          236 SVRLFATRGMELLVAQSYSKNL----GLYAERIGAMNVVCSSSDLAARVKSQL-----------------------KRLA  288 (410)
Q Consensus       236 ~~~~~~~~~~~~i~~~S~sK~~----~~~G~r~G~l~~~~~~~~~~~~~~~~~-----------------------~~~~  288 (410)
                      .    ... +.+++++| +|.|    ++.|.|+||+++   ++++.+++....                       ....
T Consensus       243 ~----~~~-g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~  313 (438)
T 1wyu_A          243 P----GAY-GADIAVGD-GQSLGLPMGFGGPHFGFLAT---KKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRA  313 (438)
T ss_dssp             H----HHH-TCSEEEEE-CTTTTCCCGGGCSCCEEEEE---CGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGG
T ss_pred             C----ccC-CCCEEEEC-CcccCCCccCCCCCeeEEEE---cHHHHHhCCCceeccccccCCCcceeeeccccccccchh
Confidence            1    111 23455666 6654    356778999855   666544331100                       0000


Q ss_pred             cCcccCC---ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceee--ec-
Q 015283          289 RPMYSNP---PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFS--FT-  361 (410)
Q Consensus       289 ~~~~~~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~--~~-  361 (410)
                      .. +.+.   ..+.+..+...+..  +   -.+.++++.++++++++++.+.|+ ++ |    +++..+. .+|.  .+ 
T Consensus       314 ~~-t~~~~~~~~~~a~~aa~~l~~--~---~~~g~~~~~~~~~~~~~~l~~~L~-~~~g----~~~~~~~-~~~~~~~~~  381 (438)
T 1wyu_A          314 KA-KSNITTNAQLTALMGAMYLAA--L---GPEGLREVALKSVEMAHKLHALLL-EVPG----VRPFTPK-PFFNEFALA  381 (438)
T ss_dssp             GS-SCCCCSCCHHHHHHHHHHHHH--H---HHHHHHHHHHHHHHHHHHHHHHHT-TSTT----CEECSCS-SBCSEEEEE
T ss_pred             cc-cCCccchHHHHHHHHHHHHHH--h---CHHHHHHHHHHHHHHHHHHHHHHh-cCCC----eEECCCC-CeEEEEEEe
Confidence            11 1111   22222111111110  0   023356788889999999999998 87 5    3444432 2332  12 


Q ss_pred             -CCCH-HHHHHhhhcCcEEE--cCC-----C--eEEecC-CCcccHHHHHHHHHHHh
Q 015283          362 -GLNK-AQSDNMTNKWHVYM--TKD-----G--RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       362 -~~~~-~~~~~ll~~~gi~v--~~~-----g--Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                       +.+. ++.++|.+ +||.+  .++     +  |||+.. .+++++++++++|++++
T Consensus       382 ~~~~~~~~~~~L~~-~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          382 LPKDPEAVRRALAE-RGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             CSSCHHHHHHHHHH-TTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHH-CCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence             2343 45666665 59988  443     3  999873 38899999999999875

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.82  E-value=3.7e-19  Score=180.06  Aligned_cols=176  Identities=11%  Similarity=-0.044  Sum_probs=120.4

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCCCcc
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS  153 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~  153 (410)
                      +..-+.++++.+|+++...       ..+++  ++|+++++..+  +.+.+.+||+|+++.++|.++... +...|++++
T Consensus       171 ~~~~i~e~e~~lA~~~gae-------~~i~v--~nGtt~an~~a--i~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v  239 (730)
T 1c4k_A          171 HEGPAVAAEKHAARVYNAD-------KTYFV--LGGSSNANNTV--TSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPV  239 (730)
T ss_dssp             TBTHHHHHHHHHHHHTTCS-------EEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEE
T ss_pred             ChHHHHHHHHHHHHHHCCC-------cEEEE--CCHHHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEE
Confidence            4445689999999996332       33666  78888999888  455578999999999999988877 888899988


Q ss_pred             ceeeecCCC----cccChhhH-----HHHHhcCCCC---c----EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283          154 EYRYYDPKT----VGLDFEGM-----IADIKAAPGG---S----FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF  217 (410)
Q Consensus       154 ~v~~~~~~~----~~~d~~~l-----~~~i~~~~~~---~----~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li  217 (410)
                      .++... +.    +.+|++++     ++.+.+.++.   +    +++++++| ||||.+.   ++++|+++|+++|++++
T Consensus       240 ~v~~~~-~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~---dl~~I~~la~~~g~~li  314 (730)
T 1c4k_A          240 YLQTNR-NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIY---NAHEVVKRIGHLCDYIE  314 (730)
T ss_dssp             EECEEE-CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEE---CHHHHHHHHGGGBSEEE
T ss_pred             EEeCCc-cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeec---CHHHHHHHHHHcCCeEE
Confidence            887642 22    33788888     8888752101   2    55666777 6899965   57788888999999999


Q ss_pred             ccccCCCC-CCCCCCCchhHhHH--HhhcCCcEEEEecccccccccCCCcceEE
Q 015283          218 FDVAYQGF-ASGSLDNDASSVRL--FATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       218 ~Deay~~~-~~~~~~~~~~~~~~--~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      +|++|... .+++.......+..  +....++++++.|+||.+  +|++.|+++
T Consensus       315 vDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I  366 (730)
T 1c4k_A          315 FDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQI  366 (730)
T ss_dssp             EECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEE
T ss_pred             EEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEE
Confidence            99998643 22210000001100  011123679999999986  467666553

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.79  E-value=2e-18  Score=176.16  Aligned_cols=174  Identities=13%  Similarity=0.078  Sum_probs=119.4

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccce
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEY  155 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v  155 (410)
                      ..-+.++++.+++++..       .+.+++  ++|+++++.++  +.+.+.+||+|+++.|+|.++...+...|++++.+
T Consensus       204 ~g~v~~~ee~la~l~G~-------d~~i~~--~~Gtt~a~~~~--i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v  272 (755)
T 2vyc_A          204 TGAFGESEKYAARVFGA-------DRSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYM  272 (755)
T ss_dssp             CHHHHHHHHHHHHHHTC-------SEEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEE
T ss_pred             ccHHHHHHHHHHHHhCC-------CceEEE--CCcHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE
Confidence            34456778888887533       234666  78888888887  44557899999999999999988888899999888


Q ss_pred             eeecCCCcc----c-----ChhhHHHHHhcCCCC-------cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccc
Q 015283          156 RYYDPKTVG----L-----DFEGMIADIKAAPGG-------SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD  219 (410)
Q Consensus       156 ~~~~~~~~~----~-----d~~~l~~~i~~~~~~-------~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D  219 (410)
                      +... ++++    +     |++.+++.+++.++.       ++++++++| ||||.+.   ++++|+++|++||+++++|
T Consensus       273 ~~~~-~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~---dl~~I~~ia~~~~~~livD  347 (755)
T 2vyc_A          273 VPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFD  347 (755)
T ss_dssp             CCCB-CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEE---CHHHHHHHHTTTCSEEEEE
T ss_pred             eCCC-CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceec---CHHHHHHHHHHcCCEEEEE
Confidence            7642 2232    4     999999999753221       135555777 7999965   5778888899999999999


Q ss_pred             ccCCCCC-CCCCCCchhHhHHH--hh-cCCcEEEEecccccccccCCCcceEE
Q 015283          220 VAYQGFA-SGSLDNDASSVRLF--AT-RGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       220 eay~~~~-~~~~~~~~~~~~~~--~~-~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      ++|.... +.+...+...+ ..  .+ ..++++++.|+||.+  +|.+.|+++
T Consensus       348 eA~~~~~~~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i  397 (755)
T 2vyc_A          348 EAWYGYARFNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLL--NALSQASYI  397 (755)
T ss_dssp             CTTCTTGGGCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSS--SCCTTCEEE
T ss_pred             CcCchhcccCcccCCcchh-cCCcCCccCCCeEEEECccccc--cCcCCeeee
Confidence            9987532 21100000111 11  11 234778999999986  467655543

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.77  E-value=1.5e-18  Score=163.64  Aligned_cols=320  Identities=13%  Similarity=0.029  Sum_probs=188.6

Q ss_pred             eeecCCCcccccHHHHHHHHHhhcc----CC----CccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLER----GE----NKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~----~~----~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      .++|..++.++++.|++++.+.+..    +.    ..+..  -..-+++.|+.+++++....     +++|+|. |+|||
T Consensus        28 ~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~-----~~evif~-t~~~T  101 (386)
T 3qm2_A           28 VFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPS-----NYKVLFC-HGGGR  101 (386)
T ss_dssp             CEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCT-----TEEEEEE-ESCTT
T ss_pred             CccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CceEEEE-cCCch
Confidence            4567778888899999998766522    10    01111  13457899999999985431     2457661 48999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCA  189 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p  189 (410)
                      ++++++  +...+.+||+|++..-++...  ...++..| ++..++.. ++++..++++.++..+++   +++++.+++.
T Consensus       102 ~a~n~a--i~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~---~t~lV~~~h~  175 (386)
T 3qm2_A          102 GQFAGV--PLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSD---NAAYLHYCPN  175 (386)
T ss_dssp             HHHHHH--HHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCT---TCSCEEECSE
T ss_pred             HHHHHH--HHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCC---CCcEEEEECC
Confidence            999998  455577999987655443333  33455678 77777763 123333677777666653   6667777888


Q ss_pred             CCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          190 HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       190 ~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      +|.||+. -+.+++   .     +|+++++|.+ +.++..+.+.+         ..+  +.+.|..|.+|++|  +|+++
T Consensus       176 et~tG~~i~pi~~i---~-----~g~~~~vDa~-qs~g~~pidv~---------~~~--~~~~s~hK~lGP~G--~g~l~  233 (386)
T 3qm2_A          176 ETIDGIAIDETPDF---G-----PEVVVTADFS-STILSAPLDVS---------RYG--VIYAGAQKNIGPAG--LTLVI  233 (386)
T ss_dssp             ETTTTEECCCCCCC---C-----TTCCEEEECT-TTTTSSCCCGG---------GCS--EEEEETTTTTCCTT--EEEEE
T ss_pred             cCCcCEecCchhhh---c-----CCCEEEEEcc-cccCCCCCCcc---------ccC--EEEEecccccCCCc--cEEEE
Confidence            8888995 554443   2     7999999999 55553222221         112  35588999999887  47775


Q ss_pred             EEeCCchhHHHHH----------HHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVK----------SQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDS  337 (410)
Q Consensus       269 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~  337 (410)
                      +   +++..+++.          .......+  +.+++..+..++...++   +.  ... .++++.++.+++++++.+.
T Consensus       234 v---~~~~~~~~~~~~p~~~~~~~~~~~~~~--~gTp~v~~i~~l~~Al~---~~--~~~gG~~~i~~~~~~l~~~l~~~  303 (386)
T 3qm2_A          234 V---REDLLGKAHESCPSILDYTVLNDNDSM--FNTPPTFAWYLSGLVFK---WL--KAQGGVAAMHKINQQKAELLYGV  303 (386)
T ss_dssp             E---EGGGCSCCCTTSCGGGCHHHHHHC---------CCSHHHHHHHHHH---HH--HHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             E---CHHHHhhhcccCCcHHHHHHHhhcCCC--CCCCcHHHHHHHHHHHH---HH--HHhcCHHHHHHHHHHHHHHHHHH
Confidence            5   444322111          11111111  12233332222222221   11  012 3578888999999999999


Q ss_pred             hhhccCCCCCc-ccccCCcce--eeecC--CCHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHH
Q 015283          338 LSAKDKSGKDW-SFILRQIGM--FSFTG--LNKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       338 l~~~~g~~~~~-~~~~~~~~~--~~~~~--~~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                      |+ ++++-... .......+.  |.+.+  ++..+... ++++||.+.+|    |  |+|+.. .|+++++++++.|+++
T Consensus       304 l~-~~~~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~-L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~  381 (386)
T 3qm2_A          304 ID-NSDFYRNDVAQANRSRMNVPFQLADNTLDKVFLEE-SFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDF  381 (386)
T ss_dssp             HH-TCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHH-HHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HH-HCCCcccCCCHHHcCceEEEEECCCccccHHHHHH-HHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            98 87631000 000111122  22222  34344555 45679999876    2  999875 4899999999999998


Q ss_pred             hhh
Q 015283          406 YHN  408 (410)
Q Consensus       406 l~~  408 (410)
                      .++
T Consensus       382 ~~~  384 (386)
T 3qm2_A          382 ERR  384 (386)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            765

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.75  E-value=4e-18  Score=159.75  Aligned_cols=310  Identities=13%  Similarity=0.043  Sum_probs=187.8

Q ss_pred             CcccccHHHHHHHHHhhccC----CC----ccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEec-CChhhHHHH
Q 015283           49 LQPYVLDVVKKAENLMLERG----EN----KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGTGSLRL  117 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~----~~----~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t-~ggt~a~~~  117 (410)
                      +..++|+.|.+++.+.+...    ..    ++..+  ..-+.+.|+.+++++....     +++|+|  + .|||+++++
T Consensus        20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~-----~~evif--~t~~~T~a~n~   92 (377)
T 3e77_A           20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPD-----NYKVIF--LQGGGCGQFSA   92 (377)
T ss_dssp             CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCT-----TEEEEE--ESSHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CCeEEE--EcCchHHHHHH
Confidence            45567899999998876321    00    01110  1235678888888875431     246776  5 789999999


Q ss_pred             HHHHHHHhCC--CCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283          118 AAALIERYFP--GAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT  193 (410)
Q Consensus       118 ~~~~~~~~~~--gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt  193 (410)
                      +  +...+.+  ||+|++...++...  ...++..|..++.++.  ++++..+++.++..++   ++++++.+++.+|.|
T Consensus        93 a--~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~--~~~~~~~~~~~~~~i~---~~t~lV~~~h~et~t  165 (377)
T 3e77_A           93 V--PLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPK--LGSYTKIPDPSTWNLN---PDASYVYYCANETVH  165 (377)
T ss_dssp             H--HHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCC--CSSSCSCCCGGGCCCC---TTCSCEEEESEETTT
T ss_pred             H--HHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEecc--CCCcCCCCChHHhccC---CCccEEEEeCccCch
Confidence            8  4444544  99998776655433  3355677876666665  3344566666655454   356666777788889


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283          194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS  273 (410)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~  273 (410)
                      |+..|.        +|+++|+++++|.+ +.++..+.+.+         ..+  +++.|..|.+|++|+  |++++   +
T Consensus       166 G~~~pi--------i~~~~~~~~~vD~~-q~~g~~~id~~---------~~~--~~~~s~~K~~gp~G~--g~l~~---~  220 (377)
T 3e77_A          166 GVEFDF--------IPDVKGAVLVCDMS-SNFLSKPVDVS---------KFG--VIFAGAQKNVGSAGV--TVVIV---R  220 (377)
T ss_dssp             TEECSS--------CCCCTTCCEEEECT-TTTTSSCCCGG---------GCS--EEEEEGGGTTSCTTC--EEEEE---E
T ss_pred             heEchh--------hhccCCCEEEEEcc-cccCCCCCchh---------hcC--EEEEecccccCCCcc--EEEEE---c
Confidence            998875        36789999999999 55553222221         112  366888999998885  77754   4


Q ss_pred             chhHHHHH-------HHHHhhc-cCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcc-C
Q 015283          274 SDLAARVK-------SQLKRLA-RPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKD-K  343 (410)
Q Consensus       274 ~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~-g  343 (410)
                      +++.+++.       +...... ...+.+|+..+..++...|+   +.  ... .++++.++.+++.+++.+.|+ ++ |
T Consensus       221 ~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~---~l--~~~GG~~~i~~~~~~l~~~l~~~L~-~~~g  294 (377)
T 3e77_A          221 DDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLE---WI--KNNGGAAAMEKLSSIKSQTIYEIID-NSQG  294 (377)
T ss_dssp             TTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHH---HH--HHTTHHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred             HHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHH---HH--HHccCHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence            44322111       0000001 11223444433333322222   10  012 357888999999999999998 87 4


Q ss_pred             CCCCccccc----CCcce---eeecCCC--H----HHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHH
Q 015283          344 SGKDWSFIL----RQIGM---FSFTGLN--K----AQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAII  403 (410)
Q Consensus       344 ~~~~~~~~~----~~~~~---~~~~~~~--~----~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~  403 (410)
                      +    ....    ..++.   |.+.+++  .    .+...+. ++||.+.+|    |  |+|+.. .|+++++.+++.|+
T Consensus       295 ~----~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~-~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~  369 (377)
T 3e77_A          295 F----YVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKAL-ELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMK  369 (377)
T ss_dssp             S----EECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHH-HTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred             c----eecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHH-HCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHH
Confidence            2    2111    11222   3334442  2    2344444 469999887    3  999875 48999999999999


Q ss_pred             HHhhh
Q 015283          404 DSYHN  408 (410)
Q Consensus       404 ~~l~~  408 (410)
                      +++++
T Consensus       370 ~~~~~  374 (377)
T 3e77_A          370 KFLEM  374 (377)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.73  E-value=6e-17  Score=151.26  Aligned_cols=309  Identities=11%  Similarity=0.039  Sum_probs=184.5

Q ss_pred             CcccccHHHHHHHHHhhcc----CCC-c--cC-cC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLER----GEN-K--EY-LP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA  118 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~----~~~-~--~y-~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~  118 (410)
                      |+.++++.|++++.+.+..    +.. +  .+ .+  ..-+.+.|+.+++++....     +++|+|+ |+|||++++++
T Consensus        12 gpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~-----~~~v~f~-t~~~T~a~n~~   85 (361)
T 3m5u_A           12 GPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELND-----DYEVLFL-QGGASLQFAMI   85 (361)
T ss_dssp             SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCT-----TEEEEEE-SSHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CceEEEE-cCcHHHHHHHH
Confidence            4455689999999887632    110 0  01 10  1235678888888875431     3355542 89999999998


Q ss_pred             HHHHHHhCCCCEEEE-cCCCCc-chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC
Q 015283          119 AALIERYFPGAKVLI-SSPTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID  196 (410)
Q Consensus       119 ~~~~~~~~~gd~Vl~-~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~  196 (410)
                        +.+.+ +||++.+ ....|. .+...++..|.++..++......+..+++. +  +++   +++++.+++.+|.||..
T Consensus        86 --~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~---~t~lv~~~~~e~~tG~~  156 (361)
T 3m5u_A           86 --PMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSD---NADYAYICSNNTIYGTQ  156 (361)
T ss_dssp             --HHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCT---TSSEEEEESEETTTTEE
T ss_pred             --HHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCC---CCCEEEEeCCCCCccee
Confidence              44445 8886632 222332 223355678999999987322212145555 3  543   56667777888888997


Q ss_pred             CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh
Q 015283          197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL  276 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~  276 (410)
                      .+.     |   ++ +|+++++|.+ +.++..+.+.+           ...+++.|..|.+|++|+  |++++   +++.
T Consensus       157 ~~~-----i---~~-~~~~~~vD~~-q~~g~~~id~~-----------~~d~~~~s~~K~~gp~G~--g~l~~---~~~~  210 (361)
T 3m5u_A          157 YQN-----Y---PK-TKTPLIVDAS-SDFFSRKVDFS-----------NIALFYGGVQKNAGISGL--SCIFI---RKDM  210 (361)
T ss_dssp             CSS-----C---CC-CSSCEEEECG-GGTTSSCCCCT-----------TEEEEEEETTTTSSCTTC--EEEEE---EHHH
T ss_pred             CCc-----c---cc-cCCEEEEEcc-cccCCCCCCcc-----------cCCEEEEechhccCCCcc--EEEEE---cHHH
Confidence            652     3   33 4999999999 55543222221           134778899999998875  77765   6776


Q ss_pred             HHHHHH----H---HHhh--ccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          277 AARVKS----Q---LKRL--ARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       277 ~~~~~~----~---~~~~--~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      .+++..    .   ....  ....+.+++..+..++   ..++.+..       .++++.++.+++++++.+.|+ +++.
T Consensus       211 ~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~g-------G~~~i~~~~~~l~~~l~~~L~-~~~g  282 (361)
T 3m5u_A          211 LERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQG-------GLDKVHEKNSQKATMLYECID-LSNG  282 (361)
T ss_dssp             HHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTT-------CHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred             HhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHcc-------CHHHHHHHHHHHHHHHHHHHH-HCCC
Confidence            655532    0   0000  1112233444333322   22222210       146888899999999999998 8761


Q ss_pred             CCCcccc-cC---Ccce--eeecC---CCHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          345 GKDWSFI-LR---QIGM--FSFTG---LNKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       345 ~~~~~~~-~~---~~~~--~~~~~---~~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                        .+... .+   ..+.  |.+.+   ++.++. ..++++||.+.+|    |  |+|+.. .|+++++++++.|+++.++
T Consensus       283 --~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~-~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~  359 (361)
T 3m5u_A          283 --FYKGHADKKDRSLMNVSFNIAKNKDLEPLFV-KEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGK  359 (361)
T ss_dssp             --SEEESSCGGGBCSSEEEEEESSCTTHHHHHH-HHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             --eeeccCCHHHcCCeEEEEECCCchhhhHHHH-HHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence              01211 11   1122  22233   233344 4455679999887    3  999775 4899999999999999875


Q ss_pred             c
Q 015283          409 V  409 (410)
Q Consensus       409 ~  409 (410)
                      .
T Consensus       360 ~  360 (361)
T 3m5u_A          360 Y  360 (361)
T ss_dssp             H
T ss_pred             c
Confidence            3

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.72  E-value=3e-16  Score=150.90  Aligned_cols=339  Identities=14%  Similarity=0.051  Sum_probs=189.3

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CC-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++... +. ..+.+.....++.+.+++......     .+.+.+  +++|
T Consensus        64 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~~v~f--~~sG  134 (456)
T 4atq_A           64 NSFIDLGSGIAVTSVGAS--DPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDH-----AKRTVL--FNSG  134 (456)
T ss_dssp             CEEEESSHHHHTCTTCTT--CHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSS-----CEEEEE--ESSH
T ss_pred             CEEEEccccHHHHhcCCC--CHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCC-----CcEEEE--eCCh
Confidence            356777766432344554  588999888876542 21 122344455577777777753321     356888  8999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCC-------------Cccceeeec----CCCcccChhhHHHH
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYD----PKTVGLDFEGMIAD  173 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~----~~~~~~d~~~l~~~  173 (410)
                      ++|++.+.++.+......+|+..+.+|.+.... +...+.             .+..+|...    ......+.+.+.+.
T Consensus       135 sEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  214 (456)
T 4atq_A          135 AEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRA  214 (456)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHH
Confidence            999999999888777778999998888765432 111111             122233211    01111122332222


Q ss_pred             Hh---c--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          174 IK---A--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       174 i~---~--~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +.   +  .++....+++-..+...|.+. ++.-++++.++|++||+++|.||+..+|+-.   ...+....+ +-.+++
T Consensus       215 ~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRt---G~~~a~e~~-gv~PDi  290 (456)
T 4atq_A          215 ITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRT---GEWFAVDHE-GVVPDI  290 (456)
T ss_dssp             HHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT---SSSSGGGGT-TCCCSE
T ss_pred             HHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCc---ccccccccc-CCCCch
Confidence            21   1  123566666666676677665 4556999999999999999999999987632   223333222 223454


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH---hCChhhHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEMMA  324 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~~~~~~  324 (410)
                      +   +++|.+| .|+.+|.+.+   ++++.+.+..   ....+++. ...++..++...   ++++++           .
T Consensus       291 v---t~gK~lg-gg~P~~av~~---~~~i~~~~~~---~~~~~Tf~-gnpla~aaala~L~~i~~~~l-----------~  348 (456)
T 4atq_A          291 I---TMAKGIA-GGLPLSAITG---RADLLDAVHP---GGLGGTYG-GNPVACAAALAAIDTMEQHDL-----------N  348 (456)
T ss_dssp             E---EECGGGG-TTSSCEEEEE---EHHHHTTSCT---TSSCCSSS-SCHHHHHHHHHHHHHHHHTTH-----------H
T ss_pred             h---hhhhccc-CcCCceeeEe---cHHHHhcccc---cCCCCCCC-CChHHHHhhHHHHHHHhhccH-----------H
Confidence            4   6789998 7899999755   6664333321   11223333 334444444333   333222           2


Q ss_pred             HHHHHHHHHHHHHhhhcc----CCC-CCcccccCCcceeeecCC--------C----HHHHHHhhhcCcEEEcCCC----
Q 015283          325 GRIKNVRQKLFDSLSAKD----KSG-KDWSFILRQIGMFSFTGL--------N----KAQSDNMTNKWHVYMTKDG----  383 (410)
Q Consensus       325 ~~~~~~~~~l~~~l~~~~----g~~-~~~~~~~~~~~~~~~~~~--------~----~~~~~~ll~~~gi~v~~~g----  383 (410)
                      ++.++..+++.+.|+ ++    ... .++.-.....|.+.-+.+        +    ..+..++++ +|+.+.++|    
T Consensus       349 ~~~~~~g~~l~~~L~-~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~-~Gvl~~~~g~~~~  426 (456)
T 4atq_A          349 GRARHIEELALGKLR-ELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLK-EGVIILTCGTYGN  426 (456)
T ss_dssp             HHHHHHHHHHHHHHH-HHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECEEECTTSC
T ss_pred             HHHHHHHHHHHHHHH-HHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHH-CCCEEEecCCCCC
Confidence            333333333433333 22    100 001111122233322211        1    234556665 599987654    


Q ss_pred             --eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          384 --RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 --Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                        ||..+ ..|++++++++++|.++++..
T Consensus       427 ~irl~PpL~it~~~id~~l~~l~~al~a~  455 (456)
T 4atq_A          427 VIRLLPPLVISDELLIDGLEVLAAAIKAH  455 (456)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence              66644 248999999999999999764

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.71  E-value=5.2e-17  Score=163.09  Aligned_cols=172  Identities=12%  Similarity=0.063  Sum_probs=115.6

Q ss_pred             CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCc
Q 015283           73 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW  152 (410)
Q Consensus        73 y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~  152 (410)
                      +.|..-+.++++.+|+++...       ..+++  ++|+++++..+  +.+.+.+||+|+++.++|.++...+...|+++
T Consensus       191 ~~~~g~i~eaE~~lA~~fGa~-------~a~~v--~nGts~An~~a--i~al~~pGD~VLv~r~~H~S~~~~l~lsGa~p  259 (715)
T 3n75_A          191 LDHSGPHKEAEQYIARVFNAD-------RSYMV--TNGTSTANKIV--GMYSAPAGSTILIDRNCHKSLTHLMMMSDVTP  259 (715)
T ss_dssp             TTTBTHHHHHHHHHHHHHTCS-------EEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEESSCCHHHHHHHHHSCCEE
T ss_pred             CCCcHHHHHHHHHHHHHhCCC-------CceEE--CcHHHHHHHHH--HHHhCCCCCEEEECCCccHHHHHHHHHcCCEE
Confidence            445555689999999996432       33555  66667888777  45568899999999999999999999999999


Q ss_pred             cceeeecCCCccc---------ChhhHHHHHhcCCCC--cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283          153 SEYRYYDPKTVGL---------DFEGMIADIKAAPGG--SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA  221 (410)
Q Consensus       153 ~~v~~~~~~~~~~---------d~~~l~~~i~~~~~~--~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea  221 (410)
                      +.++... +.+++         |++.+++.++++++.  ++++++++| ||+|.+.+.+   +|+++|++++  +++|||
T Consensus       260 v~v~~~~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~---~I~ela~~~~--livDEA  332 (715)
T 3n75_A          260 IYFRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTD---FIKKTLDVKS--IHFDSA  332 (715)
T ss_dssp             EEECCCB-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHH---HHHHHCCCSE--EEEECT
T ss_pred             EEEeccc-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHH---HHHHHhCcCc--EEEccc
Confidence            8887632 33443         899999999864321  225566788 9999977655   5555677653  789999


Q ss_pred             CCCCC-CCCCCCchhHhHHHhhc--CCc-EEEEecccccccccCCC-cceE
Q 015283          222 YQGFA-SGSLDNDASSVRLFATR--GME-LLVAQSYSKNLGLYAER-IGAM  267 (410)
Q Consensus       222 y~~~~-~~~~~~~~~~~~~~~~~--~~~-~i~~~S~sK~~~~~G~r-~G~l  267 (410)
                      |.... +++   ...+.......  .+. ++++.|+||+++  |+. .|++
T Consensus       333 H~~~~~f~~---~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i  378 (715)
T 3n75_A          333 WVPYTNFSP---IYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMI  378 (715)
T ss_dssp             TCTTGGGSG---GGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEE
T ss_pred             cccccccCC---ccccccccccCcCCCEEEEEEeccccccc--CCCCeeEE
Confidence            87553 221   00001111110  133 366999999975  543 3565

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.69  E-value=3e-15  Score=144.54  Aligned_cols=340  Identities=13%  Similarity=0.089  Sum_probs=191.5

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ..||+..|.--...|+.  .|.+.+++.+++... +.+.+.  +.....+|.+.+++.....      .+.+.+  +++|
T Consensus        68 ~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~sG  137 (473)
T 4e3q_A           68 RYLDANSGLWNMVAGFD--HKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFD------SGRVFY--TNSG  137 (473)
T ss_dssp             EEEETTTTTTTCTTCSC--CHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCS------SCEEEE--ESSH
T ss_pred             EEEEcccCHHHhhccCC--CHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCC------ccEEEE--eCch
Confidence            45666665432234544  588889888877542 112221  1222335666666653222      468999  9999


Q ss_pred             hhHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchhh-hhhhCCCC-----------ccceeeec----CCCcc-----
Q 015283          112 TGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKN-IFNDARVP-----------WSEYRYYD----PKTVG-----  164 (410)
Q Consensus       112 t~a~~~~~~~~~~~-----~~g-d~Vl~~~p~y~~~~~-~~~~~g~~-----------~~~v~~~~----~~~~~-----  164 (410)
                      ++|++.+.++.+.+     .++ .+|+...-+|.+... .+...|..           ...++...    .....     
T Consensus       138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  217 (473)
T 4e3q_A          138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF  217 (473)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence            99999998887654     133 578888877765432 22222211           11111100    00000     


Q ss_pred             --cChhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283          165 --LDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF  240 (410)
Q Consensus       165 --~d~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  240 (410)
                        ...+++++.+.+. ++...++++...+.-.|.+.+ +.-+++|.++|++||+++|.||+..+|+-.   ...+....+
T Consensus       218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRt---G~~fa~e~~  294 (473)
T 4e3q_A          218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRT---GNTWGCVTY  294 (473)
T ss_dssp             HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTT---SSSCHHHHT
T ss_pred             HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcc---cchhHHHhc
Confidence              0123455555432 234566666666777787665 455999999999999999999999998632   233333322


Q ss_pred             hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhh----ccCcccCCChhHHHHHHHHh---CChhhH
Q 015283          241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL----ARPMYSNPPVHGARIVANVV---GNPALF  313 (410)
Q Consensus       241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~l---~~~~~~  313 (410)
                       +-.++++   +++|.++-.++.+|.+.+   ++++.+.+.......    ...++ +...++..++...|   +++   
T Consensus       295 -gv~PDi~---t~~K~l~gG~~Pl~av~~---~~~i~~~~~~~~~~~~~~~hg~T~-~Gnpla~Aaala~L~~i~~~---  363 (473)
T 4e3q_A          295 -DFTPDAI---ISSKNLTAGFFPMGAVIL---GPELSKRLETAIEAIEEFPHGFTA-SGHPVGCAIALKAIDVVMNE---  363 (473)
T ss_dssp             -TCCCSEE---EECGGGGTTSSCCEEEEE---CHHHHHHHHHHHHHHSCCCCCCTT-TTCHHHHHHHHHHHHHHHHS---
T ss_pred             -CCCCChH---HhcccccCCCCCcccccc---cHHHHHHhccccccccccccCCCC-CCCcchhhhhhhhhhhhccc---
Confidence             2334555   579999844489999765   888777765543322    12223 33344444443333   222   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC----------C------CHHHHHHhhhcCcE
Q 015283          314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG----------L------NKAQSDNMTNKWHV  377 (410)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~----------~------~~~~~~~ll~~~gi  377 (410)
                              ...++.++..++|.+.|+ ++.-...+..+ ...|.+.-+.          .      ...+...+++ .|+
T Consensus       364 --------~l~~~~~~~g~~l~~~L~-~l~~~~~v~~v-RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~-~Gl  432 (473)
T 4e3q_A          364 --------GLAENVRRLAPRFEERLK-HIAERPNIGEY-RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTD-LGL  432 (473)
T ss_dssp             --------SHHHHHHHHHHHHHHHHH-HHTTSTTEEEE-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTE
T ss_pred             --------cHHHHHHHHHHHHHHHHH-HHhcCCCeeEE-eecceEEEEEEecCccccccccccHHHHHHHHHHHHH-CCc
Confidence                    333455555666666665 54311111111 2223322111          1      1234555655 699


Q ss_pred             EEcCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          378 YMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       378 ~v~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++.|.|   ||+.+ .+|++++++++++|.++++++
T Consensus       433 l~~~~g~~i~l~PPL~it~~eid~~~~~l~~al~~v  468 (473)
T 4e3q_A          433 ICRPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKV  468 (473)
T ss_dssp             ECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999877   66543 259999999999999888753

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.68  E-value=3.6e-15  Score=138.86  Aligned_cols=333  Identities=14%  Similarity=0.146  Sum_probs=193.4

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC------CcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .-|+|-..++       ++++.|++++-..+.+...-+|+.      .+-++++.....+.....++... .++-+=++.
T Consensus        55 ~~ieLIASEN-------~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~-A~w~VNVQP  126 (490)
T 3ou5_A           55 RGLELIASEN-------FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDP-AQWGVNVQP  126 (490)
T ss_dssp             HSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCT-TTEEEECCC
T ss_pred             cCceEecCCC-------cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCc-cccCCCCCc
Confidence            3467775553       247999999877664443344432      22223333333323233333322 232223456


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh--------hhCCC--CccceeeecCCCcccChhhHHHHHhcCC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--------NDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~--------~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      .+|+.|+..+  +++.+.|||+|+..+...+++...-        ...|.  +...+++ +.+++.+|.+++++...++ 
T Consensus       127 ~SGs~AN~av--y~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~v-d~~t~~IDyd~~~~~A~~~-  202 (490)
T 3ou5_A          127 YSGSPANLAV--YTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALTARLF-  202 (490)
T ss_dssp             SSHHHHHHHH--HHHHCC-CCCEECBC----------------------------CBCE-ETTTTEECHHHHHHHHHHH-
T ss_pred             CCHHHHHHHH--HHHHcCCCCEEEecccCCCCcccccccCCCccccccccccccccccc-CCCCCcccHHHHHHHHhhc-
Confidence            8899999888  5667899999999998877764322        12222  4455555 3566789999999988774 


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       ++++|+...-.+|-     .-+++++.++|++.|.+++.|.+|. ++..++..+.+  +    +  ...++..|.+|++
T Consensus       203 -kPklIi~G~SaY~r-----~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP--~----~--~ADvVTtTTHKTL  268 (490)
T 3ou5_A          203 -RPRLIIAGTSAYAR-----LIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSP--F----K--HADIVTTTTHKTL  268 (490)
T ss_dssp             -CCSEEEECCSSCCS-----CCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG--G----G--TCSEEEEESSSTT
T ss_pred             -CCCeEEECCccCcc-----ccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCc--c----c--cceEEeccccccc
Confidence             55666755444444     2357777777999999999999973 33333222222  1    1  2467889999997


Q ss_pred             cccCCCcceEEEEeCCc----------hhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSS----------DLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGR  326 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~  326 (410)
                        .|-|-|.+.  +++.          +....+.+.+....++... +|..+. .++...    .+.+.+..+++.+.++
T Consensus       269 --rGPrGG~Il--~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~-IAAkAV----af~Ea~~p~fk~Ya~q  339 (490)
T 3ou5_A          269 --RGARSGLIF--YRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHA-IAAVAV----ALKQACTPMFREYSLQ  339 (490)
T ss_dssp             --CSCSCEEEE--EECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHH-HHHHHH----HHHHHHSHHHHHHHHH
T ss_pred             --cCCCceEEE--eccccccccccccchhHHHHHHHHHhhcCccccccchHHH-HHHHHH----HHHHHHhHhHHHHHHH
Confidence              588878763  3331          0000133445555555333 444433 333222    2222234456788899


Q ss_pred             HHHHHHHHHHHhhhccCCCCCcccccCCccee-eec-----CCCHHHHHHhhhcCcEEEc----CC--------C-eEEe
Q 015283          327 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFT-----GLNKAQSDNMTNKWHVYMT----KD--------G-RISL  387 (410)
Q Consensus       327 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~ll~~~gi~v~----~~--------g-Ris~  387 (410)
                      ..++.+.|.+.|. +.|+    .+....+-.+ +++     +++...++++|++.||.+.    |+        | ||..
T Consensus       340 Vv~NAkaLA~~L~-~~G~----~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGT  414 (490)
T 3ou5_A          340 VLKNARAMADALL-ERGY----SLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA  414 (490)
T ss_dssp             HHHHHHHHHHHHH-HTTC----EEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEES
T ss_pred             HHHHHHHHHHHHH-hCCC----eeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECC
Confidence            9999999999999 8884    5444333333 444     3477889999999999874    32        4 8863


Q ss_pred             c-----CCCcccHHHHHHHHHHHhh
Q 015283          388 A-----GLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       388 ~-----~~~~~~i~~~~~~l~~~l~  407 (410)
                      +     ++.+++++++.+.|.+++.
T Consensus       415 pa~TtRG~~e~dm~~IA~~I~~~l~  439 (490)
T 3ou5_A          415 PALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             HHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            3     4688999999999988764

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.60  E-value=9.6e-14  Score=129.94  Aligned_cols=234  Identities=11%  Similarity=0.000  Sum_probs=141.0

Q ss_pred             HHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCC----CCEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283           81 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP----GAKVLISSPTWGNHKNIFNDARVPWSEYR  156 (410)
Q Consensus        81 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~  156 (410)
                      +|-+.++.-+.+..|.+.... .++  ++|+|+++..+  ++..+.+    ||.|+++.-++.+....+...|++++.++
T Consensus       116 ~ltn~l~ld~L~~~G~~~~~~-~fl--VnGsTgg~lam--ilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~  190 (501)
T 3hl2_A          116 KITNSLVLDIIKLAGVHTVAN-CFV--VPMATGMSLTL--CFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIE  190 (501)
T ss_dssp             HHHHHHHHHHHHHTTCTTCCE-EEE--ESSCHHHHHHH--HHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCCCCc-EEE--ECcHHHHHHHH--HHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEe
Confidence            555555544445556653333 444  69999777776  4444553    49999999999999999999999999885


Q ss_pred             e-ecCCCcccChhhHHHHHhcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283          157 Y-YDPKTVGLDFEGMIADIKAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA  234 (410)
Q Consensus       157 ~-~~~~~~~~d~~~l~~~i~~~~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~  234 (410)
                      . .+++..++|++.+++.+++++...++++ .++++|..|.   ..++++|+++|++||+++++|+||......   ...
T Consensus       191 p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~---~ddI~eIaeIch~~gIpllVDeAhGah~~~---~~~  264 (501)
T 3hl2_A          191 NVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRV---PDRLEELAVICANYDIPHIVNNAYGVQSSK---CMH  264 (501)
T ss_dssp             EEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBC---CCCHHHHHHHHHHHTCCEEEECTTCTTCHH---HHH
T ss_pred             eeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcc---cccHHHHHHHHHHcCCeEEEeCcchhhhhh---hhh
Confidence            4 3344678999999999987543344444 4334443333   457889999999999999999998765411   011


Q ss_pred             hHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHH
Q 015283          235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD  314 (410)
Q Consensus       235 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~  314 (410)
                      .. ......+.-++++.|..|.+-.+ +. |++ +...+++.++++...   + -...+..++....++  .+.-     
T Consensus       265 lp-~sA~~~GrAD~vVqS~HK~llvp-IG-G~i-i~~~d~e~l~~~~~~---y-PGr~S~Spsldl~~t--LL~l-----  329 (501)
T 3hl2_A          265 LI-QQGARVGRIDAFVQSLDKNFMVP-VG-GAI-IAGFNDSFIQEISKM---Y-PGRASASPSLDVLIT--LLSL-----  329 (501)
T ss_dssp             HH-HHHHHHSCCCEEEEEHHHHHCCC-SS-CEE-EEESCHHHHHHHHHT---S-CSCBCSHHHHHHHHH--HHHH-----
T ss_pred             hH-HHHHhcCCCcEEEecccccceee-cC-ceE-EEeCCHHHHHHHHHh---C-CCCCCCcHHHHHHHH--HHHH-----
Confidence            11 12222333677889999997544 22 333 235666655543221   1 011122222222222  2111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          315 EWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                       ..+.+++..++..++..++.+.|+ ++
T Consensus       330 -Gr~Gy~~ll~e~~ela~~L~~~L~-~l  355 (501)
T 3hl2_A          330 -GSNGYKKLLKERKEMFSYLSNQIK-KL  355 (501)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence             133445666666666666666666 54

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.58  E-value=4.4e-15  Score=152.71  Aligned_cols=345  Identities=10%  Similarity=0.089  Sum_probs=184.9

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ..+|+..|.--...|+.. .|++.+|+.+++.. .+ ..+.  ......+|.+.+++......     .+.+.|  +++|
T Consensus       381 ~ylD~~sg~~~~~lGh~~-~p~i~~Ai~~Q~~~l~h-~~~~~~~~~~~~~Lae~L~~~~p~~~-----l~~vff--~~SG  451 (831)
T 4a0g_A          381 QQFDACASWWTQGPDPTF-QAELAREMGYTAARFGH-VMFPENVYEPALKCAELLLDGVGKGW-----ASRVYF--SDNG  451 (831)
T ss_dssp             EEEETTHHHHTCCCCHHH-HHHHHHHHHHHHHHHSS-CCCTTEECHHHHHHHHHHHHTTTTTT-----CCEEEE--ESSH
T ss_pred             heeeecccHhhcCCCCCC-CHHHHHHHHHHHhhccc-ccccccCCHHHHHHHHHHHHhCCCCC-----CCEEEE--CCCh
Confidence            467777764323445431 58888888877644 22 1111  12223356666666532110     367999  9999


Q ss_pred             hhHHHHHHHHH-HHh--CCC------------CEEEEcCCCCcch-hhhhhhCCCCcc----------------------
Q 015283          112 TGSLRLAAALI-ERY--FPG------------AKVLISSPTWGNH-KNIFNDARVPWS----------------------  153 (410)
Q Consensus       112 t~a~~~~~~~~-~~~--~~g------------d~Vl~~~p~y~~~-~~~~~~~g~~~~----------------------  153 (410)
                      ++|++.+.++. +.+  ..|            .+|+...-+|.+- ...+...|....                      
T Consensus       452 SeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~  531 (831)
T 4a0g_A          452 STAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVF  531 (831)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEE
T ss_pred             hHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCcccc
Confidence            99999998877 323  122            3688878777543 333333332110                      


Q ss_pred             ------ceeeecC------CCccc-C------------------hhhHHHHHhc-----CCCCcEEEEeCCC-CCCCCCC
Q 015283          154 ------EYRYYDP------KTVGL-D------------------FEGMIADIKA-----APGGSFILLHGCA-HNPTGID  196 (410)
Q Consensus       154 ------~v~~~~~------~~~~~-d------------------~~~l~~~i~~-----~~~~~~~ii~~~p-~NPtG~~  196 (410)
                            .++....      +.... +                  .+.+++.+.+     .+.+..+|++-+. ++..|..
T Consensus       532 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~  611 (831)
T 4a0g_A          532 LSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMH  611 (831)
T ss_dssp             EETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSE
T ss_pred             ccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCc
Confidence                  0111000      00000 1                  2456666652     2345666666654 7888876


Q ss_pred             C-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCc
Q 015283          197 P-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSS  274 (410)
Q Consensus       197 ~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~  274 (410)
                      . +++.+++|.++|++||+++|+||++.+|+..+   ..+....+ +..++++   +++|.++ .| +++|++++   ++
T Consensus       612 ~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG---~~fa~e~~-gv~PDii---tlsK~L~-gG~~Plgav~~---~~  680 (831)
T 4a0g_A          612 MVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLG---VETTTELL-GCKPDIA---CFAKLLT-GGMVPLAVTLA---TD  680 (831)
T ss_dssp             EECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTS---BSSTHHHH-SSCCSEE---EECGGGG-TTSSCCEEEEE---CH
T ss_pred             cCCHHHHHHHHHHHHHcCCeEEEEcCccccccCC---CchhhHhc-CCCCcEE---EEecccc-cCccCcEEEEE---CH
Confidence            5 66779999999999999999999999987432   22232222 2233444   7999998 47 89999755   77


Q ss_pred             hhHHHHHHHHHh--hccCcccCCChhHHHHHHH---HhCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhhhccCCCCCc
Q 015283          275 DLAARVKSQLKR--LARPMYSNPPVHGARIVAN---VVGNPALFDEWKAEMEMMAGRIKN-VRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       275 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~---~l~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~g~~~~~  348 (410)
                      ++++.+....+.  .....+.+.+.+++.++..   .++++++.    +.+.+..+++++ .++.+.+.+. +.+.   +
T Consensus       681 ~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~----~~~~~~~~~l~~~l~~~l~~~l~-~~~~---v  752 (831)
T 4a0g_A          681 AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETN----HNITSQGKTLRELWDEELVQQIS-SHSA---V  752 (831)
T ss_dssp             HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTC----TTBCTTSSBBCCCSCHHHHHHHH-HSTT---E
T ss_pred             HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHH----HHHHHHHHHHHHHHHHHHHHHHh-hCCC---c
Confidence            755544321000  1111222334444444433   33333221    111111111111 0112333444 4331   2


Q ss_pred             ccccCCcceeeecCCC-------------HHHHHHhhhcCcEEEcCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          349 SFILRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       349 ~~~~~~~~~~~~~~~~-------------~~~~~~ll~~~gi~v~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..+.. .|.+..+.+.             ..+...+++ +||++.|.|   ||+.+ ..+++++++++++|.++++++
T Consensus       753 ~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e-~Gv~v~p~g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l  828 (831)
T 4a0g_A          753 QRVVV-IGTLFALELKADASNSGYASLYAKSLLIMLRE-DGIFTRPLGNVIYLMCGPCTSPEICRRLLTKLYKRLGEF  828 (831)
T ss_dssp             EEEEE-ETTEEEEEEC---------CHHHHHHHHHHHH-TTEECCCBTTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred             eeEee-cccEEEEEEecCccccccchHHHHHHHHHHHH-CCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            22222 3333333221             123455555 699999987   77633 349999999999999998765

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.48  E-value=1.7e-13  Score=129.85  Aligned_cols=188  Identities=11%  Similarity=-0.026  Sum_probs=118.6

Q ss_pred             cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHH-HHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283           79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAA-ALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYR  156 (410)
Q Consensus        79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~-~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~  156 (410)
                      ...+.+.+..++....|.+-. .-..+  ++|+|++...++ ...+... +|+.|+++.-+|.+....+...|+.++.++
T Consensus        96 ~~~~e~~~~~~~~~~lGlp~~-~~~~l--V~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~  172 (450)
T 3bc8_A           96 LNKITNSLVLNVIKLAGVHSV-ASCFV--VPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIE  172 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTC-CEEEE--ESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCCCC-ceEEE--ECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEE
Confidence            345555666665554454321 22344  688885555542 2222222 389999999999999999999999888775


Q ss_pred             ee-cCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283          157 YY-DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA  234 (410)
Q Consensus       157 ~~-~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~  234 (410)
                      .. +++.+.+|++.+++.+++.+ +.+.+++.+..++.+|.   .+++++|+++|++||+++++|+||......     .
T Consensus       173 ~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~---~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~-----~  244 (450)
T 3bc8_A          173 NVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRV---PDRLEELAVICANYDIPHVVNNAYGLQSSK-----C  244 (450)
T ss_dssp             CEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBC---CCCHHHHHHHHHHHTCCEEEECTTTTTCHH-----H
T ss_pred             eeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCce---ecCHHHHHHHHHHCCCeEEEECCCchhhhh-----h
Confidence            42 24567899999999997744 23444444333444555   567889999999999999999998765421     1


Q ss_pred             hHhH-HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283          235 SSVR-LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       235 ~~~~-~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      ..+. .......-+.++.|.+|.+..+ ...+++  ..++++..+++
T Consensus       245 ~~l~~~a~~~~~AD~~v~S~HK~l~a~-~~~~~l--~~rd~~~~~~~  288 (450)
T 3bc8_A          245 MHLIQQGARVGRIDAFVQSLDKNFMVP-VGGAII--AGFNEPFIQDI  288 (450)
T ss_dssp             HHHHHHHHHHSCCCEEEEEHHHHHSCC-SSCEEE--EESCHHHHHHH
T ss_pred             HhHHHHHhcccCCCEEEECCccCCCch-hccEEE--EecCHHHHHHH
Confidence            1111 1121123466788999998543 223443  34566655444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	410
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	1e-107
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	1e-103
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-100
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	4e-98
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-97
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	1e-96
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-13
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	6e-13
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	2e-12
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	7e-08
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	3e-04
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	0.002

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  320 bits (820), Expect = e-107
 Identities = 183/404 (45%), Positives = 250/404 (61%), Gaps = 8/404 (1%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE- 66
           S F  V  A P  +  +   F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +   
Sbjct: 4   SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN 63

Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
              N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++
Sbjct: 64  SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY 123

Query: 127 -----PGAKVLISSPTWGNHKNIFNDA-RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180
                    V +SSPTW NH  +F  A       YRY+D +  GLD +G ++D++ AP  
Sbjct: 124 NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183

Query: 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240
           S  +LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQGFASG+L+ DA ++R F
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243

Query: 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300
            + G EL  AQS+SKN GLY ER+G + VV    D   RV SQ++++ R  +SNPP  GA
Sbjct: 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303

Query: 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF 360
           RIVA  + +P LF EW   ++ MA RI ++R +L   L A    G  W+ I  QIGMFSF
Sbjct: 304 RIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG-TWNHITDQIGMFSF 362

Query: 361 TGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
           TGLN  Q + + N+ H+Y+   GRI++ GL+    +Y+A +I +
Sbjct: 363 TGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHE 406

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  310 bits (794), Expect = e-103
 Identities = 201/396 (50%), Positives = 276/396 (69%), Gaps = 2/396 (0%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER 67
           S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL+ V+KAE ++  +
Sbjct: 2   SWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK 61

Query: 68  GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF- 126
             +KEYLPI GLA F + +AEL  G ++   K  R  TVQG+SGTGSLR+ A  ++R+F 
Sbjct: 62  KMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFK 121

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
               V +  P+WGNH  IF DA +    YRYYDPKT  LDF G + DI   P  S ILLH
Sbjct: 122 FSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLH 181

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246
            CAHNPTG+DP  EQW+++A V++++N + +FD+AYQGFASG ++ DA ++R F  +G++
Sbjct: 182 ACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGID 241

Query: 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306
           ++++QSY+KN+GLY ER GA  V+C  ++ A RV+SQLK L RPMYSNPP++GARI + +
Sbjct: 242 VVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLI 301

Query: 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKA 366
           +  P L  EW  E++ MA RI ++R +L  +L  +  S  +W  I  QIGMF FTGL   
Sbjct: 302 LNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE-GSSHNWQHITDQIGMFCFTGLKPE 360

Query: 367 QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           Q + +T ++ +YMTKDGRIS+AG++ +   YLA AI
Sbjct: 361 QVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAI 396

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  301 bits (771), Expect = e-100
 Identities = 165/394 (41%), Positives = 240/394 (60%), Gaps = 3/394 (0%)

Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE-NLMLERG 68
           F+ V     DPIL + E FK D    K+NL +G Y  E+     L  V +AE  L  +  
Sbjct: 2   FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPH 61

Query: 69  ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128
               YLP+EGL  +    A LLFGAD+ VLK+QRVAT+Q L G+G+L++ A  ++RYFP 
Sbjct: 62  GASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE 121

Query: 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188
           + V +S PTW NH  IF  A    S Y +YD  T G+ F  ++A +K  P  S +LLH C
Sbjct: 122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPC 181

Query: 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248
            HNPTG D T +QW+ + ++++ +  IPF D+AYQGF +G ++ DA ++R  A+ G+  L
Sbjct: 182 CHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPAL 240

Query: 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308
           V+ S+SK   LY ER+G ++V+C  ++ A RV  QLK   R  YS+PP  GA++VA V+ 
Sbjct: 241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN 300

Query: 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQS 368
           + AL   W AE+E M  RI  +RQ+L   LS +    +++ ++L Q GMFS+TGL+ AQ 
Sbjct: 301 DEALKASWLAEVEEMRTRILAMRQELVKVLSTE-MPERNFDYLLNQRGMFSYTGLSAAQV 359

Query: 369 DNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402
           D +  ++ VY+   GR+ +AGL+ A  + +A A 
Sbjct: 360 DRLREEFGVYLIASGRMCVAGLNTANVQRVAKAF 393

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  296 bits (758), Expect = 4e-98
 Identities = 175/395 (44%), Positives = 247/395 (62%), Gaps = 2/395 (0%)

Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
           FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE   
Sbjct: 2   FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 61

Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     
Sbjct: 62  TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121

Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC 
Sbjct: 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCC 181

Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTGIDPT EQW+ +A +  EK  +P FD AYQGFA G L+ DA  +R FA    EL+V
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIV 240

Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A SYSKN GLY ER+GA  +V + S+   R  SQ+K   R  YSNPP HGA +VA ++ N
Sbjct: 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300

Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
            AL   W+ E+  M  RI+ +RQ   ++L  K  + +D+SFI++Q GMFSF+GL K Q  
Sbjct: 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEK-GANRDFSFIIKQNGMFSFSGLTKEQVL 359

Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
            +  ++ VY    GR+++AG++      L +AI+ 
Sbjct: 360 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVA 394

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  295 bits (755), Expect = 1e-97
 Identities = 148/395 (37%), Positives = 213/395 (53%), Gaps = 5/395 (1%)

Query: 10  FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE 69
              +    PD IL +   F+AD  + K++LGVG Y+       ++  V  AE  MLE   
Sbjct: 2   LGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETET 61

Query: 70  NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129
            K Y  + G   F K   EL+ G      K +  AT+  + GTG+LR A  L     P  
Sbjct: 62  TKTYAGLSGEPEFQKAMGELILGDGL---KSETTATLATVGGTGALRQALELARMANPDL 118

Query: 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189
           +V +S PTW NH +I N   +P   YRY+D +T G+DFEGM AD+ AA  G  +LLHGC 
Sbjct: 119 RVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCC 178

Query: 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249
           HNPTG + T +QW +IA ++++   +P  D+AYQGF    L+ DA+  RL A+R  E+L+
Sbjct: 179 HNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGD-GLEEDAAGTRLIASRIPEVLI 237

Query: 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309
           A S SKN G+Y ER G +  +C+ +      +  +  L R  YS PP HGA+IV+ V+  
Sbjct: 238 AASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTT 297

Query: 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSD 369
           P L  +W AE+E +   +  +R++L   L     S   + F+    GMFS  G    Q  
Sbjct: 298 PELRADWMAELEAVRSGMLRLREQLAGELRDLSGSD-RFGFVAEHRGMFSRLGATPEQVK 356

Query: 370 NMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
            +  ++ +YM  D RI++AGL+      LA AII+
Sbjct: 357 RIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIE 391

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  293 bits (750), Expect = 1e-96
 Identities = 164/405 (40%), Positives = 233/405 (57%), Gaps = 9/405 (2%)

Query: 8   SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-E 66
           + F  + + PPD + G+ + +  D    K++LG+GAYR +  +P+VL  VK AE L+  +
Sbjct: 3   TLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHND 62

Query: 67  RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126
              N EYL I GL +     A+++FG  +  L+E RV +VQ LSGTG+L ++A    ++F
Sbjct: 63  SSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFF 122

Query: 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186
           P   V +S PTW NH  IF +  +  + Y Y+  +T  LD  G +  I+ AP GS  +LH
Sbjct: 123 PDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLH 182

Query: 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM- 245
            CAHNPTG+DPT EQW +I D I  KNHI  FD AYQGFA+G LD DA +VRL   +   
Sbjct: 183 SCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLST 242

Query: 246 --ELLVAQSYSKNLGLYAERIGAMNVVCSSSD----LAARVKSQLKRLARPMYSNPPVHG 299
              + V QS++KN G+Y ER+G  ++  +       +   V SQL ++ R   SNPP +G
Sbjct: 243 VSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYG 302

Query: 300 ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS 359
           A+IVA ++  P L ++W  +M  M+ RI  +R  L D L      G +W  I+ Q GMFS
Sbjct: 303 AKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPG-NWDHIVNQCGMFS 361

Query: 360 FTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404
           FTGL       +     VY+   GR S+AGL+    EY+A AI +
Sbjct: 362 FTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDE 406

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 69.5 bits (169), Expect = 1e-13
 Identities = 44/217 (20%), Positives = 79/217 (36%), Gaps = 13/217 (5%)

Query: 51  PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110
            ++ +  K+A    L++G    Y P  GL    +  AE L   +      +    V   +
Sbjct: 41  QHIKEYAKEA----LDKGLTH-YGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGA 95

Query: 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM 170
               L   +A ++    G +VLI +P + ++      A     E   Y+     L+ + +
Sbjct: 96  NQAFLMGLSAFLK---DGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDEL 152

Query: 171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230
              +         L+     NPTG   T +  E+IAD + E + I   D  Y+ F     
Sbjct: 153 KKYVTDKTR---ALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYD-- 207

Query: 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 267
           D    S+          +    +SK   +   R+G +
Sbjct: 208 DARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFV 244

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score = 67.5 bits (164), Expect = 6e-13
 Identities = 52/311 (16%), Positives = 95/311 (30%), Gaps = 27/311 (8%)

Query: 17  PPDPILGVSEAFKADTDEKK--LNLGVG--AYRTEELQPYVLDVVKKAENLMLERGENKE 72
            P   + V+        +    + L  G   + T     +V +  ++A    L +G+ K 
Sbjct: 12  KPSATVAVNAKALELRRQGVDLVALTAGEPDFDTP---EHVKEAARRA----LAQGKTK- 63

Query: 73  YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 132
           Y P  G+    +  AE     +   +  +      G S        A L     PG +V+
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL----DPGDEVI 119

Query: 133 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192
           + SP W ++  +   A     E      +    D E +   I         L+    +NP
Sbjct: 120 VLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTK---ALVVNSPNNP 176

Query: 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252
           TG     E  E +A +  E +     D  Y+           S  R+        L    
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYE--GEHFSPGRVAPEH---TLTVNG 231

Query: 253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPAL 312
            +K   +   RIG     C   ++   + S  ++      +         + N   + A 
Sbjct: 232 AAKAFAMTGWRIGYA---CGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAF 288

Query: 313 FDEWKAEMEMM 323
            +  +      
Sbjct: 289 VEMAREAYRRR 299

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score = 66.0 bits (160), Expect = 2e-12
 Identities = 51/256 (19%), Positives = 88/256 (34%), Gaps = 22/256 (8%)

Query: 17  PPDPILGVSEAFKADTDEKK--LNLGVGA--YRTEELQPYVLDVVKKAENLMLERGENKE 72
            P   L +    KA   E     +   G   + T     ++++  K A    LE+G+ + 
Sbjct: 11  SPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTP---KHIVEAAKAA----LEQGKTR- 62

Query: 73  YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 132
           Y P  G     +  A+ L   +        +    G   +    L  A+IE   PG +V+
Sbjct: 63  YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFN-LMLAMIE---PGDEVI 118

Query: 133 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192
           I +P W ++  +   A                +  E +   I        +L+     NP
Sbjct: 119 IPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTK---LLVFNTPSNP 175

Query: 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA-Q 251
           TG+  TP++   IA V  E       D  Y+       D    S+   +    E  V   
Sbjct: 176 TGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYD--DAQHLSIGAASPEAYERSVVCS 233

Query: 252 SYSKNLGLYAERIGAM 267
            ++K   +   R+G +
Sbjct: 234 GFAKTYAMTGWRVGFL 249

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score = 51.9 bits (123), Expect = 7e-08
 Identities = 55/326 (16%), Positives = 103/326 (31%), Gaps = 30/326 (9%)

Query: 37  LNLGVGAYRTEELQP--YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD 94
           + L +G     + QP  ++ +   KA    ++ G N  Y   EGL    K   E     +
Sbjct: 33  IRLNIGDPVKFDFQPPEHMKEAYCKA----IKEGHNY-YGDSEGLPELRKAIVEREKRKN 87

Query: 95  NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 154
              +    V     ++    L   A       PG ++L+  P++  +  +         E
Sbjct: 88  GVDITPDDVRVTAAVTEALQLIFGA----LLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 143

Query: 155 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 214
           YR  + +    D + +   I         +     +NPTG     +  E+I ++  E   
Sbjct: 144 YRTIEEEDWQPDIDDIRKKITDRT---KAIAVINPNNPTGALYDKKTLEEILNIAGEYEI 200

Query: 215 IPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274
               D  Y             S+    T+ + ++V    SK       R+G M  V   +
Sbjct: 201 PVISDEIYDLMTYEGEHISPGSL----TKDVPVIVMNGLSKVYFATGWRLGYMYFVDPEN 256

Query: 275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 334
            L+   ++  +     +  N P   A I                 ++    ++K  R  +
Sbjct: 257 KLSEVREAIDRLARIRLCPNTPAQFAAIAG--------LTGPMDYLKEYMKKLKERRDYI 308

Query: 335 FDSLSAKDKSGKDWSFILRQIGMFSF 360
           +  L          S    Q   + F
Sbjct: 309 YKRL----NEIPGISTTKPQGAFYIF 330

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.0 bits (92), Expect = 3e-04
 Identities = 45/260 (17%), Positives = 86/260 (33%), Gaps = 24/260 (9%)

Query: 17  PPDPILGVSEAFKADTDEKK--LNLGVG--AYRTEELQPYVLDVVKKAENLMLERGENKE 72
           P    + +    KA   + +  +NL  G   + T      V++   +     L++GE K 
Sbjct: 9   PISKTMELDAKAKALIKKGEDVINLTAGEPDFPTP---EPVVEEAVRF----LQKGEVK- 60

Query: 73  YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAA-ALIERYFPGAKV 131
           Y    G+    +         +           V       +L  A  AL++   PG +V
Sbjct: 61  YTDPRGIYELRE--GIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLD---PGDEV 115

Query: 132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191
           ++ SP W ++      A    +    +  K      E +        G +  +L    +N
Sbjct: 116 IVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEV---EGLLVGKTKAVLINSPNN 172

Query: 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251
           PTG+    E  E +  + +++N     D  Y              V     R   ++   
Sbjct: 173 PTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDR---IVYIN 229

Query: 252 SYSKNLGLYAERIGAMNVVC 271
            +SK+  +   R+G +    
Sbjct: 230 GFSKSHSMTGWRVGYLISSE 249

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 36/299 (12%), Positives = 74/299 (24%), Gaps = 55/299 (18%)

Query: 111 GTGSLRLAAALI---------ERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK 161
           G G  +L   L+             P +KV+  +P +   +                   
Sbjct: 129 GVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKK--------GY 180

Query: 162 TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221
               +    +          +I +    +NP G+        K    I        +D+ 
Sbjct: 181 VWAGNAANYVNVSNPEQ---YIEMVTSPNNPEGL--LRHAVIKGCKSI--------YDMV 227

Query: 222 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 281
           Y       +            +  E ++  + SK  G    R G    +     +     
Sbjct: 228 YYWPHYTPI----------KYKADEDILLFTMSKFTGHSGSRFG--WALIKDESVYNN-- 273

Query: 282 SQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 341
             L           P               +  E  A ++   G ++++    F  L  +
Sbjct: 274 --LLNYMTKNTEGTPRETQLRSL------KVLKEVVAMVKTQKGTMRDLNTFGFKKLRER 325

Query: 342 DKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLAD 400
             +      +L Q   FS+  L +++  N   +          +         C     
Sbjct: 326 WVNITA---LLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQ 381

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	410
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	100.0
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.93
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.92
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.91
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.91
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.9
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.89
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.88
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.88
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.87
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.86
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.85
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.83
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.81
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.8
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.8
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.78
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.78
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.75
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.75
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.75
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.74
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.73
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.72
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.72
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.72
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.71
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.71
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.71
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.7
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.69
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.69
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.69
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.69
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.68
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.68
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.66
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.66
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.66
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.64
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.64
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.64
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.63
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.63
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.62
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.61
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.61
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.59
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.58
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.58
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.54
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.54
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.52
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.51
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.48
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.41
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.25
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.14
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	98.84
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	98.64

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=1.5e-60  Score=455.16  Aligned_cols=400  Identities=50%  Similarity=0.903  Sum_probs=342.0

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      .|+|+.|.+.|+|+|+++.++++.++++++|||+.|.+.|+.+.+++++.|+++..+....+..+.|+|..|.++||+++
T Consensus         1 ~~~~~~~~~~p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai   80 (401)
T d7aata_           1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS   80 (401)
T ss_dssp             CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred             CCccccCCCCCCChHHHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Confidence            38899999999999999999999999999999999999899998888899999988887665546899999999999999


Q ss_pred             HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283           87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL  165 (410)
Q Consensus        87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  165 (410)
                      ++++.+.++....+++|...++.+|+++...+..++.. +.|||+|++++|+|+.|..+++.+|++++.+|+.+++++.+
T Consensus        81 a~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~  160 (401)
T d7aata_          81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL  160 (401)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred             HHHHhccCCcccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEeccccccccc
Confidence            99999988888888888886666777777666545544 56999999999999999999999999999999988888999


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      |++.+.+.+....++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++...............+
T Consensus       161 ~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~  240 (401)
T d7aata_         161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI  240 (401)
T ss_dssp             CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred             cHHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhc
Confidence            99999888876566888999999999999999999999999999999999999999999998642222222223344566


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      +++++.|+||.++++|||+||+++.....+...++...+....+..+.+++.+.|.++...+.+..+..+|.+++++.++
T Consensus       241 ~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~  320 (401)
T d7aata_         241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD  320 (401)
T ss_dssp             CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             ccceeEeccccceeeccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence            88999999999999999999996632222233334444444444556788899999999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHH
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~  405 (410)
                      +++++++.+.+.|+ +++....+.+..+++|+|+|++++.+++++|++++||++.||+|||++++++++|+.++++|.++
T Consensus       321 ~~~~~r~~l~~~L~-~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~gV~~~pg~Ris~a~~~~~~i~~la~ai~~v  399 (401)
T d7aata_         321 RIISMRTQLVSNLK-KEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV  399 (401)
T ss_dssp             HHHHHHHHHHHHHH-HTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-HhCCCCCcceECCCCeEEEecCCCHHHHHHHHHhCCEEECCCcEEEeccCCHHHHHHHHHHHHHH
Confidence            99999999999999 88765556778899999999999999999999999999999999999998999999999999998


Q ss_pred             hh
Q 015283          406 YH  407 (410)
Q Consensus       406 l~  407 (410)
                      ++
T Consensus       400 ~k  401 (401)
T d7aata_         400 TK  401 (401)
T ss_dssp             HC
T ss_pred             hC
Confidence            74

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=1.5e-58  Score=442.68  Aligned_cols=404  Identities=45%  Similarity=0.782  Sum_probs=343.0

Q ss_pred             ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCCcccHHHHH
Q 015283            6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNK   84 (410)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~   84 (410)
                      -||.|+.+.+.||++|+.++++++.++++.+|||++|.+.|+.|.+++++.|+++....... ...+.|+|..|.++||+
T Consensus         2 ~~s~~~~~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lre   81 (412)
T d1ajsa_           2 PPSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRT   81 (412)
T ss_dssp             CCCTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHH
T ss_pred             CcChhhhCCcCCCChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHH
Confidence            47999999999999999999999999889999999999989999988889999987765433 33467999999999999


Q ss_pred             HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-----hCCCCEEEEcCCCCcchhhhhhhCCCCcccee-ee
Q 015283           85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-----YFPGAKVLISSPTWGNHKNIFNDARVPWSEYR-YY  158 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-----~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~  158 (410)
                      ++++++.+.++..+..+++.++++.+++++...+..++..     +.|||+|++++|+|+.|..+++..|++.+.++ ..
T Consensus        82 aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~  161 (412)
T d1ajsa_          82 CASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYW  161 (412)
T ss_dssp             HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECE
T ss_pred             HHHHHHhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeeccc
Confidence            9999999998888888888887788888877766444432     36999999999999999999999999876654 44


Q ss_pred             cCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          159 DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       159 ~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                      +++.+..|++.+++.+....++++++++|+||||||.+++.+++++|+++|++||++||+||+|.++.+++...+.....
T Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~  241 (412)
T d1ajsa_         162 DTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIR  241 (412)
T ss_dssp             ETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred             ccccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhh
Confidence            56667889999888877666788999999999999999999999999999999999999999999999764222223333


Q ss_pred             HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283          239 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA  318 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~  318 (410)
                      ......+.++++.|+||.++++|+|+||+++.....+..+++...+.......+.+++..+|.++..++.+....++|.+
T Consensus       242 ~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (412)
T d1ajsa_         242 YFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTG  321 (412)
T ss_dssp             HHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHH
T ss_pred             hhhhhcccccccccccccccCCCCCccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHH
Confidence            33456678999999999999999999999764333344445555555555667778899999999999998888888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHH
Q 015283          319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYL  398 (410)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~  398 (410)
                      +++..+++++++++.+.+.|+ +++..+.+.++.+++|+|.|++++.+++.+|++++||+++||+|||++++++++++.+
T Consensus       322 ~~~~~~~~l~~~r~~l~~~L~-~~~~~~~~~~i~~~~G~F~~~~ls~~~v~~L~~e~gV~~vpg~Ri~~ag~~~~~i~~~  400 (412)
T d1ajsa_         322 NVKTMADRILSMRSELRARLE-ALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYV  400 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HhCCCCCeeeecCCCeEEEecCCCHHHHHHHHHhCCEEEeCCCeEEeccCCHHHHHHH
Confidence            999999999999999999999 8876555677788999999999999999999999999999999999998899999999


Q ss_pred             HHHHHHHhhhcC
Q 015283          399 ADAIIDSYHNVS  410 (410)
Q Consensus       399 ~~~l~~~l~~~~  410 (410)
                      +++|++++++++
T Consensus       401 a~aI~~av~~~~  412 (412)
T d1ajsa_         401 ATSIHEAVTKIQ  412 (412)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHhcC
Confidence            999999998763

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=6.7e-58  Score=437.73  Aligned_cols=401  Identities=41%  Similarity=0.747  Sum_probs=338.6

Q ss_pred             ccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCCcccHHHHHHH
Q 015283            8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~ai   86 (410)
                      |.|+++...|+|+|+++.+++++++++.+|||++|.+.|+.+.+++++.|+++....... ...+.|+|..|.++||+++
T Consensus         3 ~~~~~~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~ai   82 (412)
T d1yaaa_           3 TLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNA   82 (412)
T ss_dssp             TTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred             ChhhcCCcCCCChHHHHHHHHhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHH
Confidence            789999999999999999999999999999999999888999988889999987665432 3346799999999999999


Q ss_pred             HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283           87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD  166 (410)
Q Consensus        87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  166 (410)
                      ++++.+.++..+.++.+....+.++.+++..+..+...+.+||.|++++|+|+.|...++..|++++.+++.+++++.++
T Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~  162 (412)
T d1yaaa_          83 AKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLD  162 (412)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEEC
T ss_pred             HHHHhcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceeccccccccccccc
Confidence            99998888877767777765556666666665444555679999999999999999999999999999999888888899


Q ss_pred             hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH---Hhhc
Q 015283          167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL---FATR  243 (410)
Q Consensus       167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~---~~~~  243 (410)
                      .+.+++.+...++.++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++..........   ....
T Consensus       163 ~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~  242 (412)
T d1yaaa_         163 LNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLST  242 (412)
T ss_dssp             HHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTT
T ss_pred             chhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhcccc
Confidence            9999888877666788899999999999999999999999999999999999999999998642211111111   1234


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhH----HHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA----ARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAE  319 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~  319 (410)
                      .++++++.|+||.++++|+|+||+++.....+..    +.+........+.++.+++.++|.++..++.+..+..+|.++
T Consensus       243 ~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~  322 (412)
T d1yaaa_         243 VSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKD  322 (412)
T ss_dssp             TCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             CCCeEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHHHH
Confidence            5689999999999999999999996632222222    222233334455677899999999999999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHH
Q 015283          320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLA  399 (410)
Q Consensus       320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~  399 (410)
                      ++.++++++++++.+.+.|+ ++|....+.+..+++|+|+|++++.+++++|++++||++.||+|||++++++++++.++
T Consensus       323 ~~~~~~~~~~~r~~l~~~L~-~~g~~~~~~~~~~~gG~F~~~~ls~e~~~~L~~e~~V~~~~g~Ris~~g~~~~~i~~l~  401 (412)
T d1yaaa_         323 MVTMSSRITKMRHALRDHLV-KLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVA  401 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HhCCCCCCceeCCCceEEEecCcCHHHHHHHHHhCCEEECCCCEEEeccCCHHHHHHHH
Confidence            99999999999999999999 88866667778899999999999999999999999999999999999988999999999


Q ss_pred             HHHHHHhhhc
Q 015283          400 DAIIDSYHNV  409 (410)
Q Consensus       400 ~~l~~~l~~~  409 (410)
                      ++|.++++.+
T Consensus       402 ~ai~~v~k~~  411 (412)
T d1yaaa_         402 KAIDEVVRFY  411 (412)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhh
Confidence            9999998764

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-57  Score=434.89  Aligned_cols=395  Identities=44%  Similarity=0.778  Sum_probs=320.2

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      |.++.+.|+|+|+++.+++++++++++|||+.|.+.|+.+.+++++.|+++..+..+.+..+.|+|..|.++||++++++
T Consensus         2 f~~~~~~p~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~   81 (396)
T d2q7wa1           2 FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQEL   81 (396)
T ss_dssp             CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccccccCCCChHHHHHHHHhccCCCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHH
Confidence            67899999999999999999988888999999999889999888899999988887665557899999999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      +.+.++..+.++.+..+.+.+++++..++..++..+.+||.|++++|+|+.|..++...|++++.+++.+++++..+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~  161 (396)
T d2q7wa1          82 LFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDA  161 (396)
T ss_dssp             HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHH
T ss_pred             HHhhcCCcccccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEecccccccccccccch
Confidence            99888887777777665678888787777656666789999999999999999999999999999999888888888888


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +.+......++++++++++||||||.+++.+++++|+++|++|+++||+||+|+++.+++ +.............+++++
T Consensus       162 ~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~~~~  240 (396)
T d2q7wa1         162 LINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGL-EEDAEGLRAFAAMHKELIV  240 (396)
T ss_dssp             HHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCH-HHHTHHHHHHHHHCSCEEE
T ss_pred             HHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCC-ccCchHhhhhhhhcccccc
Confidence            888777766788999999999999999999999999999999999999999999999752 1122233333456678999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      +.|+||.++++|+|+||+++.....+....+...........+++++...|.++..++.+......|+++++++++++++
T Consensus       241 ~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
T d2q7wa1         241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQR  320 (396)
T ss_dssp             EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred             cccccccccccCCCccccccchhHHHHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999866222222223333333334455677889999999999999988888889999999999999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l  406 (410)
                      +++.+.+.|+ +++....+.+..+++|+|.|++++.+++++|++++||++.||||||++++++++|++++++|++++
T Consensus       321 ~r~~l~~~L~-~~~~~~~~~~~~~~~G~F~~~~l~~e~~~~L~~e~gV~~~~g~Ri~~a~l~~~~i~~~~~ai~~v~  396 (396)
T d2q7wa1         321 MRQLFVNTLQ-EKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             HHHHHHHHHH-HTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHH-HhCCCCCcceecCCCeEEEeeCCCHHHHHHHHHhCCEEECCCCEEEecCCCHHHHHHHHHHHHHhC
Confidence            9999999999 888655567778889999999999999999999999999999999999999999999999999875

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-57  Score=433.49  Aligned_cols=393  Identities=41%  Similarity=0.714  Sum_probs=332.5

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCCcccHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAE   88 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~aia~   88 (410)
                      |.++...|.|||+++.+++++++++++|||+.|.|.|+.+.+++++.|++|....... ...+.|+|..|.++||+++++
T Consensus         2 ~~~~~~~~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~   81 (397)
T d3tata_           2 FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAP   81 (397)
T ss_dssp             CCCCCCCCCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHH
T ss_pred             cccCCCCCCCcHHHHHHHHhcCCCCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHH
Confidence            6788999999999999999999989899999999988999888889999997765433 334679999999999999999


Q ss_pred             HhcCCCCCcccCCceEEEecCChhhH--HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283           89 LLFGADNSVLKEQRVATVQGLSGTGS--LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD  166 (410)
Q Consensus        89 ~~~~~~~~~~~~~~i~~~~t~ggt~a--~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  166 (410)
                      ++.+.++..++++++..  +.+++++  ..+...+...+.|||.|++++|+|+.|..+++.+|.+++.+|+.+++++..|
T Consensus        82 ~~~~~~~~~~~~~~i~~--~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~  159 (397)
T d3tata_          82 LLFGADHPVLKQQRVAT--IQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVR  159 (397)
T ss_dssp             HHTCSSCHHHHTTCEEE--CCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCC
T ss_pred             HHhhccCCcCCcCcEEE--ecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccc
Confidence            99999888888899888  5544443  2232223345679999999999999999999999999999999877888889


Q ss_pred             hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      .+.+.+.+...+++++++++++||||||.++|.+++++|+++|++|+++||+||+|.++.+++ +.............++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~  238 (397)
T d3tata_         160 FNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGM-EEDAYAIRAIASAGLP  238 (397)
T ss_dssp             HHHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCH-HHHHHHHHHHHTTTCC
T ss_pred             hHHHHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCC-cccchhhhhhhhcCCc
Confidence            999888887666788899999999999999999999999999999999999999999999752 1222222223345568


Q ss_pred             EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR  326 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~  326 (410)
                      ++++.|+||.++++|||+||+++.....+...++..........++++++...|.++...+.+..+..+|.++++..+++
T Consensus       239 ~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (397)
T d3tata_         239 ALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTR  318 (397)
T ss_dssp             CEECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             eEEEecCcccccccCccccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999976444444455555555555666677888999999989999988888899999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283          327 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       327 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l  406 (410)
                      ++++++.+.+.|. +.+..+.+.+..+++|+|+|++++.+++++|++|+||++.||+|||+++++++++++++++|++++
T Consensus       319 ~~~~r~~l~~~L~-~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~~V~l~~g~Ri~~a~~~~~~i~~~~~ai~~v~  397 (397)
T d3tata_         319 ILAMRQELVKVLS-TEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM  397 (397)
T ss_dssp             HHHHHHHHHHTTT-TTCTTSCTTHHHHCCSSBCCCCCCHHHHHHHTTTTCEECCSSSCCBTTSCCTTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHH-HhCCCCceEEEcCCCceEEecCcCHHHHHHHHHhCCEEeCCCCEEEeccCCHHHHHHHHHHHHHhC
Confidence            9999999999998 776555567778999999999999999999999999999999999999999999999999999875

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=7e-56  Score=422.05  Aligned_cols=391  Identities=37%  Similarity=0.650  Sum_probs=328.7

Q ss_pred             ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      +++++..++|+|+++..+++++.++++|||+.|.+.|+.|.+++++.|++++.+..+....+.|.|..|.++||++++++
T Consensus         2 ~~~~~~~~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~   81 (394)
T d2ay1a_           2 LGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGEL   81 (394)
T ss_dssp             GGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHH
T ss_pred             CCCCCCCCCChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHH
Confidence            67899999999999999999998889999999999999999988899999998887665446899999999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      +.+..+.....+.+ +  +.+|+++..++..++....+||.|++++|+|+.|...++.+|.+++.+++.+++++..+.+.
T Consensus        82 ~~~~~~~~~~~~~~-~--~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~  158 (394)
T d2ay1a_          82 ILGDGLKSETTATL-A--TVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEG  158 (394)
T ss_dssp             HHGGGCCGGGEEEE-E--EEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHH
T ss_pred             Hhccccccccccce-e--ccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchh
Confidence            87766544333333 3  57777776665545656789999999999999999999999999999999877788888888


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      +++.....+++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++ +...............+++
T Consensus       159 ~~~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~~~~  237 (394)
T d2ay1a_         159 MKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGL-EEDAAGTRLIASRIPEVLI  237 (394)
T ss_dssp             HHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCH-HHHHHHHHHHHHHCSSEEE
T ss_pred             HHHHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccc-cccchhhhhhhhhcccccc
Confidence            888877766788999999999999999999999999999999999999999999999752 1111222222335568899


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      +.|+||.++++|+|+||+++.....+....+...+.......+++++...|.++...+.+..+..+|.++++.+++++++
T Consensus       238 ~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  317 (394)
T d2ay1a_         238 AASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLR  317 (394)
T ss_dssp             EEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccCCcccccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999976333333333444444444555667888888888889999999999999999999999999


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHH
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~  405 (410)
                      +++.+.+.|+ +++....|.+..+++|+|.|++++.+++++|++++||++.||+|||++++++++++.++++|.+|
T Consensus       318 ~r~~l~~~L~-~~~~~~~~~~~~~~~G~F~~~~ls~~~~~~L~~~~~V~~~~g~Ri~~a~l~~~~i~~l~~ai~~v  392 (394)
T d2ay1a_         318 LREQLAGELR-DLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             HHHHHHHHHH-HHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HhCCCCceeeECCCceeEEecCcCHHHHHHHHHhCCEEecCCCEEEecCCCHHHHHHHHHHHHHh
Confidence            9999999998 87654456778899999999999999999999999999999999999999999999999999886

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=8.7e-54  Score=406.09  Aligned_cols=370  Identities=16%  Similarity=0.147  Sum_probs=303.4

Q ss_pred             cccccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK   84 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~   84 (410)
                      |.++.++..++|++++++.++.++.  .+.++|||+.|+|    ++++ |+.+++++.+.++.+. ++|++..|.+++|+
T Consensus         1 m~~~~~~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~p----~~~~-p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lR~   74 (388)
T d1j32a_           1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEP----DFNT-PKHIVEAAKAALEQGK-TRYGPAAGEPRLRE   74 (388)
T ss_dssp             CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSC----SSCC-CHHHHHHHHHHHHTTC-CSCCCTTCCHHHHH
T ss_pred             CchhhHhhcCCcCHHHHHHHHHHHHHHCCCCeEECCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHH
Confidence            6677788889999887777655543  3458999999998    4443 7889999988887665 78999999999999


Q ss_pred             HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283           85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG  164 (410)
Q Consensus        85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~  164 (410)
                      ++++++.+.++..+++++|++  |+|+++++..++  ...+.|||+|++++|+|+.|...++..|.+++.++..+++++.
T Consensus        75 aia~~~~~~~g~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~  150 (388)
T d1j32a_          75 AIAQKLQRDNGLCYGADNILV--TNGGKQSIFNLM--LAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFK  150 (388)
T ss_dssp             HHHHHHHHHHCCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTC
T ss_pred             HHHHHHHHhcccCCCCceEEE--cCCHHHHHHHHH--HHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccC
Confidence            999999888888999999999  999999999984  3347799999999999999999999999999999887777889


Q ss_pred             cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hc
Q 015283          165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TR  243 (410)
Q Consensus       165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~  243 (410)
                      +|++++++.+++   +++++++++||||||.+++.+++++|+++|+++|++||+||+|..+.+++..  ..++.... ..
T Consensus       151 ~d~~~l~~~~~~---~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~--~~s~~~~~~~~  225 (388)
T d1j32a_         151 VSPEQIRQAITP---KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQ--HLSIGAASPEA  225 (388)
T ss_dssp             CCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCHHH
T ss_pred             CCHHHHHHhCCC---CCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCC--CCCHHHhCccc
Confidence            999999998875   7788888999999999999999999999999999999999999998875322  11221211 12


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++++++||||.|++||+|+||+++   ++++++.+....    ......++..+|.++...+.+.      .+++++.
T Consensus       226 ~~~~i~~~S~SK~~~~~GlRvG~~~~---~~~~~~~~~~~~----~~~~~~~~~~~q~a~~~~~~~~------~~~~~~~  292 (388)
T d1j32a_         226 YERSVVCSGFAKTYAMTGWRVGFLAG---PVPLVKAATKIQ----GHSTSNVCTFAQYGAIAAYENS------QDCVQEM  292 (388)
T ss_dssp             HHTEEEEEESTTTTTCTTTCCEEEEC---CHHHHHHHHHHH----HTTTCSCCHHHHHHHHHHHHSC------SHHHHHH
T ss_pred             ccceeEecCChhhhhcchhHeEEEEE---CHHHHHHHHHhh----hhccccccHHHHHHHhhcccch------HHHHHHH
Confidence            24899999999999999999999744   777665544432    2334567778887776666543      3456788


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC--------eEEecC
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG--------RISLAG  389 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g--------Ris~~~  389 (410)
                      ++.++++++.+.+.|. +.+.   +.+..|++|+|+|+.+     + .+++.++++++||.+.||.        |++++.
T Consensus       293 ~~~~~~~~~~~~~~l~-~~~g---~~~~~p~gg~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~  368 (388)
T d1j32a_         293 LAAFAERRRYMLDALN-AMPG---LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT  368 (388)
T ss_dssp             HHHHHHHHHHHHHHHH-TCTT---CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS
T ss_pred             HHHHHHHHHHHHHHHH-hCCC---CEecCCCceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEeC
Confidence            9999999999999998 7642   5778899999999865     2 3567888888899999972        999986


Q ss_pred             CCcccHHHHHHHHHHHhhhc
Q 015283          390 LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~~  409 (410)
                       +++++++++++|+++++.+
T Consensus       369 -~~e~l~~al~rl~~~l~~l  387 (388)
T d1j32a_         369 -DLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             -CHHHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHHHHh
Confidence             8999999999999999875

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-52  Score=397.46  Aligned_cols=363  Identities=17%  Similarity=0.135  Sum_probs=294.0

Q ss_pred             ccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia   87 (410)
                      +.|+..++|+++.++.++.++  ..+.++|+|+.|+|    .+++ |+.+++++.+++..+. .+|++..|.++||++++
T Consensus         5 ~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p----~~~~-p~~i~~a~~~~~~~~~-~~Y~~~~G~~~lR~~ia   78 (382)
T d1b5pa_           5 SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEP----DFDT-PEHVKEAARRALAQGK-TKYAPPAGIPELREALA   78 (382)
T ss_dssp             CHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSC----SSCC-CHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHH
T ss_pred             HHHHHhCCCCHHHHHHHHHHHHHhCCCCeEECCCCCC----CCCC-CHHHHHHHHHHHhcCC-cCCCCCCCCHHHHHHHH
Confidence            455677888888887765543  33467999999998    4443 7899999999887665 78999999999999999


Q ss_pred             HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283           88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF  167 (410)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  167 (410)
                      +++...++..+++++|++  |+|+++++..++  ...+.+||.|++++|+|+.|...++..|++++.+++.+++++.+|+
T Consensus        79 ~~~~~~~~~~~~~~~i~i--t~G~~~al~~~~--~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  154 (382)
T d1b5pa_          79 EKFRRENGLSVTPEETIV--TVGGSQALFNLF--QAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDP  154 (382)
T ss_dssp             HHHHHTTCCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCH
T ss_pred             hhhhhhccccccccccee--cCCHHHHHHHHH--HHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCH
Confidence            999888899999999999  999999999984  3447799999999999999999999999999999987777889999


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +.+++.+.+   +++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+.+...   +  ......+++
T Consensus       155 ~~l~~~~~~---~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~---~--~~~~~~~~~  226 (382)
T d1b5pa_         155 ERVRRAITP---RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHF---S--PGRVAPEHT  226 (382)
T ss_dssp             HHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC---C--GGGTCTTTE
T ss_pred             HHHHHhCCC---CCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCC---C--HHHcCCCCE
Confidence            999988764   77888889999999999999999999999999999999999999998753221   1  112234689


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      ++++|+||.|++||+|+||+++   ++++++.+...    .......++...+.++...+.+...   +...++..++.+
T Consensus       227 i~~~s~SK~~~~~GlR~G~~~~---~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  296 (382)
T d1b5pa_         227 LTVNGAAKAFAMTGWRIGYACG---PKEVIKAMASV----SRQSTTSPDTIAQWATLEALTNQEA---SRAFVEMAREAY  296 (382)
T ss_dssp             EEEEESTTTTTCGGGCCEEEEC---CHHHHHHHHHH----HHTTTCSCCHHHHHHHHHHHHCHHH---HHHHHHHHHHHH
T ss_pred             EEEecchhhccCcHhheEEEEE---CHHHHHHHHHH----HHhcccCcccccccccccccccccc---hhHHHHHHHHHH
Confidence            9999999999999999999744   77765554432    2333446677777776666655433   244567788889


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCCC--------eEEecCCCccc
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAK  394 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~  394 (410)
                      +++++.+.+.+. ..|    +.+..|++|+|+|+++     +...+.+++.++||.+.||.        ||+++. ++++
T Consensus       297 ~~~~~~~~~~l~-~~g----~~~~~p~gg~~~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~~-~~e~  370 (382)
T d1b5pa_         297 RRRRDLLLEGLT-ALG----LKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYAT-SEEN  370 (382)
T ss_dssp             HHHHHHHHHHHH-HHT----CCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCS-CHHH
T ss_pred             HhhhhHHHHHHh-hcC----CeEecCCceEEEeEeCCCCCCCHHHHHHHHHHCCEEEEeCcccCCCCeEEEEEcC-CHHH
Confidence            999999999998 887    4778899999999855     34445544556799999972        999986 8899


Q ss_pred             HHHHHHHHHHHh
Q 015283          395 CEYLADAIIDSY  406 (410)
Q Consensus       395 i~~~~~~l~~~l  406 (410)
                      +++++++|++++
T Consensus       371 l~~al~rl~~~L  382 (382)
T d1b5pa_         371 LRKALERFARVL  382 (382)
T ss_dssp             HHHHHHHGGGGC
T ss_pred             HHHHHHHHHHhC
Confidence            999999998874

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=8.2e-52  Score=393.15  Aligned_cols=364  Identities=18%  Similarity=0.171  Sum_probs=293.0

Q ss_pred             CCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc
Q 015283           12 GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF   91 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~   91 (410)
                      +++..+++.|.++-+....  .+++|+|+.|+|    ++++ |+.+++++.++++.+. .+|++..|.++||+++++++.
T Consensus         5 ~~~~~~~s~ir~~~~~~~~--~~dvi~l~~g~p----~~~~-p~~v~~~~~~a~~~~~-~~Y~~~~G~~~lr~aia~~~~   76 (388)
T d1gdea_           5 RLELVSASEIRKLFDIAAG--MKDVISLGIGEP----DFDT-PQHIKEYAKEALDKGL-THYGPNIGLLELREAIAEKLK   76 (388)
T ss_dssp             HHHHSCCCHHHHHHHHHHH--CTTCEECCCCSC----CSCC-CHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhhhCCccHHHHHHHHHhC--CCCeEECCCCCC----CCCC-CHHHHHHHHHHHhcCc-cCCCCCcCCHHHHHHHHHHHH
Confidence            3445566666665544433  357999999998    4443 7899999988887665 789999999999999999986


Q ss_pred             CCCCC-cccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH
Q 015283           92 GADNS-VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM  170 (410)
Q Consensus        92 ~~~~~-~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  170 (410)
                      ..++. ...+++|++  |+|+++++..+  +...+.+||+|++++|+|+.|...++..|++++.+++.++++|.+|++++
T Consensus        77 ~~~~~~~~~~~~i~~--t~G~~~~l~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  152 (388)
T d1gdea_          77 KQNGIEADPKTEIMV--LLGANQAFLMG--LSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDEL  152 (388)
T ss_dssp             HHHCCCCCTTTSEEE--ESSTTHHHHHH--HTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHH
T ss_pred             hhccccCCChheeee--ccCcchHHHHH--HHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHH
Confidence            54433 344678998  99999999997  34447799999999999999999999999999999997778899999999


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA  250 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  250 (410)
                      ++.+++   +++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++.  ...++..+....++++++
T Consensus       153 ~~~~~~---~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~  227 (388)
T d1gdea_         153 KKYVTD---KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDA--RHYSIASLDGMFERTITV  227 (388)
T ss_dssp             HHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTCGGGEEEE
T ss_pred             HHhCcc---CCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccC--CCCChhhccCCCCeEEEE
Confidence            998875   678888899999999999999999999999999999999999999986532  222332333344689999


Q ss_pred             ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +||||.||+||+|+||+++   +++.++++....    ......++...+.++..++.++..    .+++++.++.++++
T Consensus       228 ~S~SK~~~~~GlR~G~ii~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~  296 (388)
T d1gdea_         228 NGFSKTFAMTGWRLGFVAA---PSWIIERMVKFQ----MYNATCPVTFIQYAAAKALKDERS----WKAVEEMRKEYDRR  296 (388)
T ss_dssp             EESTTTTTCGGGCCEEEEC---CHHHHHHHHHHH----HTTTCSCCHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHH
T ss_pred             eCChhhccCccccEEEEEe---eccchhhhhhcc----ccccccccccchhhHHHHHhhccc----hhHHHHHHHHHHHh
Confidence            9999999999999999754   777655554433    233446778888888888887654    45567788888899


Q ss_pred             HHHHHHHhhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCccc
Q 015283          331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAK  394 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~  394 (410)
                      +..+.+.+. ..+    +....|++|+|+|+.+     + .++++++++++||.+.||.          |||++. ++++
T Consensus       297 ~~~~~~~l~-~~~----~~~~~p~gg~fl~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~-~~e~  370 (388)
T d1gdea_         297 RKLVWKRLN-EMG----LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEK  370 (388)
T ss_dssp             HHHHHHHHH-HTT----CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHH
T ss_pred             hhhhhhhhh-hcc----ccccCCCceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEecC-CHHH
Confidence            999999998 776    4667889999999855     3 3557788888899999872          999986 8899


Q ss_pred             HHHHHHHHHHHhhhc
Q 015283          395 CEYLADAIIDSYHNV  409 (410)
Q Consensus       395 i~~~~~~l~~~l~~~  409 (410)
                      +++++++|++++++.
T Consensus       371 l~~al~rL~~~l~e~  385 (388)
T d1gdea_         371 LEEAMDRMERVLKER  385 (388)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999999875

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=3.3e-50  Score=382.28  Aligned_cols=356  Identities=17%  Similarity=0.153  Sum_probs=286.6

Q ss_pred             hhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceE
Q 015283           25 SEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVA  104 (410)
Q Consensus        25 ~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~  104 (410)
                      ++++++ .+.++|+|+.|+|.+ ..+++ |+.+++++.++++.+. ++|++..|.++||+++++++.+.+|..+++++|+
T Consensus        22 a~~l~~-~G~~vi~l~~G~P~~-~df~~-p~~i~~a~~~a~~~~~-~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~i~   97 (395)
T d1xi9a_          22 ARELEK-KGIKVIRLNIGDPVK-FDFQP-PEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVR   97 (395)
T ss_dssp             HHHHHH-TTCCCEECCCCCGGG-TTCCC-CHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred             HHHHHH-CCCCeEECCCCCCCC-CCCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhcccccccccccc
Confidence            344433 356799999999722 23333 7899999999887665 7899999999999999999988889999999999


Q ss_pred             EEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEE
Q 015283          105 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL  184 (410)
Q Consensus       105 ~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~i  184 (410)
                      +  ++|+++++.++  +...+.+||.|++++|+|+.|...++..|++++.+++..++++.+|++.+++.+.+   +++++
T Consensus        98 i--~~G~~~~~~~~--~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~---~~~~v  170 (395)
T d1xi9a_          98 V--TAAVTEALQLI--FGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD---RTKAI  170 (395)
T ss_dssp             E--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT---TEEEE
T ss_pred             c--ccccchhhhhh--hhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHHHhhcc---cccEE
Confidence            9  99999999987  34447799999999999999999999999999999988788899999999988864   77888


Q ss_pred             EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283          185 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI  264 (410)
Q Consensus       185 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  264 (410)
                      ++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++...   .. .......++++++||||.|++||+|+
T Consensus       171 ~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~---~~-~~~~~~~~vi~~~S~SK~~~~~GlRv  246 (395)
T d1xi9a_         171 AVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI---SP-GSLTKDVPVIVMNGLSKVYFATGWRL  246 (395)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC---CH-HHHCSSSCEEEEEESTTTTCCGGGCC
T ss_pred             EecCCCCCccchhhHHHHHHHHhhhhhcCeeEEecccccccccccccc---ch-hhcCCCCCEEEEeCcchhcccchhhc
Confidence            889999999999999999999999999999999999999988753221   21 12334568999999999999999999


Q ss_pred             ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      ||+++ ..+...++.+.+....... ....++..+|.++...+.+.      .+++++.++.++++++.+.+.|. +++.
T Consensus       247 G~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~  317 (395)
T d1xi9a_         247 GYMYF-VDPENKLSEVREAIDRLAR-IRLCPNTPAQFAAIAGLTGP------MDYLKEYMKKLKERRDYIYKRLN-EIPG  317 (395)
T ss_dssp             EEEEE-ECTTCTTHHHHHHHHHHHH-HTCCSCSHHHHHHHHHHHSC------CHHHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred             EeeEe-cCHHHHHHHHHHHHHHhhc-CCCCcCHHHHHHHHHHhcCC------HHHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence            99854 3344444444443332221 23456777788777666543      23467888999999999999998 8763


Q ss_pred             CCCcccccCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283          345 GKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                         +.+..|++|+|+|+.+       +.+++.++++++||.+.||.          ||+++. +++++++++++|+++++
T Consensus       318 ---~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~-~~e~l~eal~rl~~~l~  393 (395)
T d1xi9a_         318 ---ISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLP-PIEILEEAMDRFEKFMK  393 (395)
T ss_dssp             ---EECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred             ---ceecCCCeeEEEeEECCCCCCCCHHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence               4677889999999743       34568889988899999862          999976 89999999999999987


Q ss_pred             h
Q 015283          408 N  408 (410)
Q Consensus       408 ~  408 (410)
                      +
T Consensus       394 e  394 (395)
T d1xi9a_         394 E  394 (395)
T ss_dssp             H
T ss_pred             c
Confidence            5

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=6e-49  Score=376.05  Aligned_cols=370  Identities=15%  Similarity=0.152  Sum_probs=281.4

Q ss_pred             CCCcccchhHhhhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC--
Q 015283           18 PDPILGVSEAFKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD--   94 (410)
Q Consensus        18 ~~~~~~~~~~~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~--   94 (410)
                      .+++..+.+.++..+++ ++|+|+.|+| +......+++.+.+++.+.+.....++|++..|.++||+++++++.+.+  
T Consensus        13 ~~pir~~~~~~~~~~~~~~vI~L~~G~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~   91 (412)
T d1bw0a_          13 FNPIRTVSDNAKPSPSPKPIIKLSVGDP-TLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVH   91 (412)
T ss_dssp             CCHHHHHHHTCCCCCSCSCCEECCCCCT-TTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCC
T ss_pred             ccHHHHHHHhcCCCCCCCCcEECcCCCC-CCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCc
Confidence            45666666666655544 6899999998 3333333567888888887765545789999999999999999987553  


Q ss_pred             ----CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH
Q 015283           95 ----NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM  170 (410)
Q Consensus        95 ----~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  170 (410)
                          +..+++++|++  |+|+++++..++  ...+.+||+|++++|+|+.|...++..|++++.+++.+++++.++++.+
T Consensus        92 ~~~~~~~~~~~~I~i--t~G~~~al~~~~--~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l  167 (412)
T d1bw0a_          92 KEELKSTIVKDNVVL--CSGGSHGILMAI--TAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEI  167 (412)
T ss_dssp             STTTGGGCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHH
T ss_pred             ccccCCCCCCCeEEE--ecccccchhhhh--hhhhccccceeeeeccchhhhhhhhccCccccccccccccccchhhHHH
Confidence                45678899999  999999999983  4447799999999999999999999999999999998778888999999


Q ss_pred             HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH-HHhhcCCcEEE
Q 015283          171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LFATRGMELLV  249 (410)
Q Consensus       171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~-~~~~~~~~~i~  249 (410)
                      ++.+.+   .++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++......... ........+++
T Consensus       168 ~~~~~~---~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (412)
T d1bw0a_         168 RRLKDD---KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVI  244 (412)
T ss_dssp             HHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEE
T ss_pred             Hhhhhc---cccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCcccccccccccccccccc
Confidence            888765   78888889999999999999999999999999999999999999998764221111100 01123347899


Q ss_pred             EecccccccccCCCcceEEEEeCCchh-HHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDL-AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      ++|+||.++++|+|+||+++  .++.. ...+......... ....++...+.++...+.+.     +++++.+.+++++
T Consensus       245 ~~s~SK~~~~~G~RvG~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  316 (412)
T d1bw0a_         245 LGGTAKNLVVPGWRLGWLLY--VDPHGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEALLNT-----PQEHLDQIVAKIE  316 (412)
T ss_dssp             EEESTTTTSCGGGCCEEEEE--ECTTCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHHHHSS-----CHHHHHHHHHHHH
T ss_pred             ccccCccCccCCCCcccccc--cchhhcchhhhhhhccccc-cccCCchhhhhhcccccccc-----cccccccccchhH
Confidence            99999999999999999854  22211 1112221221111 22334445444443333322     1456788999999


Q ss_pred             HHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCC----------CHHHHHHhhhcCcEEEcCC------C--eEEecC
Q 015283          329 NVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL----------NKAQSDNMTNKWHVYMTKD------G--RISLAG  389 (410)
Q Consensus       329 ~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~~~------g--Ris~~~  389 (410)
                      ++++.+.+.|. +. |    +.+..|++|+|+|+.+          +.++++++++++||.+.||      |  |||++.
T Consensus       317 ~~r~~~~~~l~-~~~g----~~~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~  391 (412)
T d1bw0a_         317 ESAMYLYNHIG-ECIG----LAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR  391 (412)
T ss_dssp             HHHHHHHHHHT-TSTT----EEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS
T ss_pred             HHHHHHHHHHH-HhcC----ceecCCCCceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcC
Confidence            99999999997 54 4    5778899999998633          2467889999889999997      2  999987


Q ss_pred             CCcccHHHHHHHHHHHhhhc
Q 015283          390 LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~~  409 (410)
                       +++++++++++|++.+++.
T Consensus       392 -~~e~l~eal~Rl~~~l~~~  410 (412)
T d1bw0a_         392 -PVEVYREAVERIKAFCQRH  410 (412)
T ss_dssp             -CHHHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHHHhc
Confidence             8899999999999998764

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.1e-48  Score=367.78  Aligned_cols=359  Identities=17%  Similarity=0.157  Sum_probs=286.4

Q ss_pred             CCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283           12 GVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~   89 (410)
                      |++..|.+..+++.+..++.  ++.++|||+.|.|    .+++ |+.+++++.+.+..+. .+|++..|.++||++++++
T Consensus         4 r~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~p----~~~~-p~~i~~~~~~~~~~~~-~~Y~~~~G~~~lR~aia~~   77 (375)
T d1o4sa_           4 RISEIPISKTMELDAKAKALIKKGEDVINLTAGEP----DFPT-PEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKR   77 (375)
T ss_dssp             HHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSC----SSCC-CHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHH
T ss_pred             hhhhCCCCHHHHHHHHHHHHHHCCCCeEECCCcCC----CCCC-CHHHHHHHHHHHhcCC-cCCCCCcCCHHHHHHHHhh
Confidence            34445555555555544432  3467999999998    4443 7899999988876655 7899999999999999999


Q ss_pred             hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283           90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG  169 (410)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  169 (410)
                      +...++..+++++|++  |+|+++++..+  +...+.+||.|++++|+|+.|...+...|.....++..+.+++.+|.+.
T Consensus        78 ~~~~~~~~~~~~~i~~--t~G~~~al~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (375)
T d1o4sa_          78 IGERYKKDISPDQVVV--TNGAKQALFNA--FMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEE  153 (375)
T ss_dssp             HHHHHTCCCCGGGEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred             hhhccccccccccccc--cCcHHHHHHHH--HHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHH
Confidence            9888888888999999  99999999998  3444779999999999999999999999999988888777788888888


Q ss_pred             HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283          170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV  249 (410)
Q Consensus       170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  249 (410)
                      ++.....   ++.+++++|||||||.+++.+++++|+++|++|+++||+||+|..+.++....   ......+..+++++
T Consensus       154 ~~~~~~~---~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~---~~~~~~~~~~~~i~  227 (375)
T d1o4sa_         154 VEGLLVG---KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFT---SILDVSEGFDRIVY  227 (375)
T ss_dssp             HHHTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCC---CHHHHCSSSTTEEE
T ss_pred             HHHhhcc---CccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhcccccccccc---ccccccCCCCCEEE
Confidence            8776554   77888889999999999999999999999999999999999999888653222   22234456679999


Q ss_pred             EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                      ++|+||.+++||+|+||++.   +++.++.+.....    ......+...+..+...+.+.         ....++.+++
T Consensus       228 ~~S~SK~~~l~G~R~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  291 (375)
T d1o4sa_         228 INGFSKSHSMTGWRVGYLIS---SEKVATAVSKIQS----HTTSCINTVAQYAALKALEVD---------NSYMVQTFKE  291 (375)
T ss_dssp             EEESTTTTTCGGGCCEEEEC---CHHHHHHHHHHHH----HHTCSCCHHHHHHHHHHTTCC---------CHHHHHHHHH
T ss_pred             EeechhhccCCccccccccc---cccchhhhhhhhc----cccccccccchhhhhhhcccc---------hhhhHHHHHH
Confidence            99999999999999999744   7776555544332    223345566655555554433         2356677888


Q ss_pred             HHHHHHHHhhhccCCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHH
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYL  398 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~  398 (410)
                      +++.+.+.|+ +.|    +++..|++|+|+|+.+   +.+++.++++++||.+.||.        ||+++. ++++++++
T Consensus       292 r~~~~~~~l~-~~g----~~~~~p~gg~f~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~-~~e~l~~a  365 (375)
T d1o4sa_         292 RKNFVVERLK-KMG----VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEA  365 (375)
T ss_dssp             HHHHHHHHHH-HTT----CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHH
T ss_pred             HHHHHHHHHH-hcC----ceEecCCccEEEEEECCCCHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEcC-CHHHHHHH
Confidence            8999999998 887    5778899999999866   35678898888899999962        999986 89999999


Q ss_pred             HHHHHHHhhh
Q 015283          399 ADAIIDSYHN  408 (410)
Q Consensus       399 ~~~l~~~l~~  408 (410)
                      +++|+++++.
T Consensus       366 l~rl~~~l~~  375 (375)
T d1o4sa_         366 LDRIEDFLNS  375 (375)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHhcC
Confidence            9999999863

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=1.7e-48  Score=373.41  Aligned_cols=372  Identities=13%  Similarity=0.027  Sum_probs=289.5

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNK   84 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~   84 (410)
                      |.+..+++..++....++.+...+   +++|||+.|.|    .+++ |+.+++++.+++...  ..++|++..|.++||+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~I~L~~G~P----d~~~-p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lRe   73 (418)
T d2r5ea1           2 FDLPKRYQGSTKSVWVEYIQLAAQ---YKPLNLGQGFP----DYHA-PKYALNALAAAANSPDPLANQYTRGFGHPRLVQ   73 (418)
T ss_dssp             CCCCGGGTTCCCCHHHHHHHHHHH---HCCEECSSSCC----SSCC-CHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHH
T ss_pred             CchhhhhcCCCCCHHHHHHHHhcC---CCCEEccCCCC----CCCC-CHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHH
Confidence            556677888888766555533322   46899999998    3433 688999988887542  2367999999999999


Q ss_pred             HHHHHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC--
Q 015283           85 VTAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--  161 (410)
Q Consensus        85 aia~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~--  161 (410)
                      ++|+++.+.+|..+++ ++|++  |+|+++++.++.  ...+.+||.|++++|+|+.|...+...|.+++.+++.++.  
T Consensus        74 aiA~~~~~~~g~~~~p~~~I~i--t~G~~~al~~~~--~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  149 (418)
T d2r5ea1          74 ALSKLYSQLVDRTINPMTEVLV--TVGAYEALYATI--QGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTG  149 (418)
T ss_dssp             HHHHHHHHHHTSCCCTTTSEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCS
T ss_pred             HHHHHHHHHhCCCCCccceEEE--cCCCchhhhhhh--hhccccccceeccccccchhhHHHHHcCCeEEEEEecccccc
Confidence            9999998888888875 78999  999999999983  4447899999999999999999999999999999885432  


Q ss_pred             ------CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283          162 ------TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS  235 (410)
Q Consensus       162 ------~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~  235 (410)
                            .+.++.+.+.....   ..++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.+++..  ..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~--~~  224 (418)
T d2r5ea1         150 GTISSADWVLDNNELEALFN---EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFE--HI  224 (418)
T ss_dssp             SCEEGGGEECCHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CC
T ss_pred             cchhhhhhhhhHHHHhhhhh---ccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCc--cc
Confidence                  24566677766654   37888888999999999999999999999999999999999999999875322  22


Q ss_pred             HhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh-hHH
Q 015283          236 SVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA-LFD  314 (410)
Q Consensus       236 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~-~~~  314 (410)
                      ++..+.+..++++++.|+||.+++||+|+||+++   ++++++.+...    ......+++...|.+++..+.... ..+
T Consensus       225 s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~---~~~~i~~~~~~----~~~~~~~~~~~~q~a~~~~l~~~~~~~~  297 (418)
T d2r5ea1         225 RICTLPGMWERTITIGSAGKTFSLTGWKIGWAYG---PEALLKNLQMV----HQNCVYTCATPIQEAIAVGFETELKRLK  297 (418)
T ss_dssp             CGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEES---CHHHHHHHHHH----HTTTTCSCCHHHHHHHHHHHHHHHTTTT
T ss_pred             cccccccccceeeeeecCCccccCCCcccccccc---cchhhhhhhhc----ccccccccccchhhhccccccccccccc
Confidence            3333334456999999999999999999999744   77765555443    333334566777776655443211 111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----------------CHHHHHHhhhcCcE
Q 015283          315 EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----------------NKAQSDNMTNKWHV  377 (410)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~ll~~~gi  377 (410)
                      ..++++.+.++.++.+++.+.+.|+ +.|    +.+..|++|+|+|+++                 +.++++++++++||
T Consensus       298 ~~~~~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV  372 (418)
T d2r5ea1         298 SPECYFNSISGELMAKRDYMASFLA-EVG----MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGL  372 (418)
T ss_dssp             STTSHHHHHHHHHHHHHHHHHHHHH-HTT----CEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSE
T ss_pred             cchhhHHHHHHHHHHhhhhHHhhHh-hcC----CcccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCE
Confidence            1134567889999999999999999 887    5788899999999743                 23567889988899


Q ss_pred             EEcCC-------------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          378 YMTKD-------------G--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       378 ~v~~~-------------g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+.||             +  |||++. +++++++++++|++.+..
T Consensus       373 ~v~PG~~F~~~~~~~~g~~~iRis~~~-~~e~l~~a~~rl~~~lg~  417 (418)
T d2r5ea1         373 QGIPPSAFYSEPNKHLGEDFVRYCFFK-KDENLQKAAEILRKWKGS  417 (418)
T ss_dssp             ECBCGGGGSCGGGHHHHTTEEEEECCS-CHHHHHHHHHHHHHHHTC
T ss_pred             EEeCchhhCCCCCccCCCCEEEEEecC-CHHHHHHHHHHHHHHHcc
Confidence            99997             1  999976 889999999999998753

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-48  Score=372.12  Aligned_cols=367  Identities=15%  Similarity=0.102  Sum_probs=288.6

Q ss_pred             cCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHH
Q 015283           11 EGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAEL   89 (410)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~   89 (410)
                      .|+..+.+++..++.+.   ..++++|||+.|.|    .+++ |+.+.+++.+++..+ ..++|++..|.++||++++++
T Consensus         5 ~r~~~~~~~~~~~~~~~---~~~~dvI~l~~G~p----~~~~-p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~   76 (418)
T d1w7la_           5 RRLDGIDYNPWVEFVKL---ASEHDVVNLGQGFP----DFPP-PDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASF   76 (418)
T ss_dssp             GGGTTCCCCTHHHHHHH---HHTSCCEECCCCSC----SSCC-CHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHH
T ss_pred             ccccCCCCCHHHHHHHH---hCCCCCEECCCCCC----CCCC-CHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHH
Confidence            45666666766555432   23457999999998    4554 789999999888653 236799999999999999999


Q ss_pred             hcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC--------
Q 015283           90 LFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP--------  160 (410)
Q Consensus        90 ~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~--------  160 (410)
                      +.+.+|..+++ ++|++  |+|+++++.+++  ...+.+||.|++++|+|+.|...+...|++++.++..+.        
T Consensus        77 ~~~~~g~~~~~~~~I~i--t~G~~~al~~~~--~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~  152 (418)
T d1w7la_          77 FGELLGQEIDPLRNVLV--TVGGYGALFTAF--QALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELG  152 (418)
T ss_dssp             HHHHHTCCCCHHHHEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSE
T ss_pred             HHHHhCCCCCcccceee--ccCcHHHHHHHH--HhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccc
Confidence            98777887775 68999  999999999984  444779999999999999999999999999888876432        


Q ss_pred             --CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283          161 --KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR  238 (410)
Q Consensus       161 --~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  238 (410)
                        +++.+|.+++.....   +.++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++.  ...++.
T Consensus       153 ~~~~~~~d~~~~~~~~~---~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~--~~~~~~  227 (418)
T d1w7la_         153 SSSNWQLDPMELAGKFT---SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH--QHISIA  227 (418)
T ss_dssp             EGGGEECCHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGG
T ss_pred             cccCcccchhhhhcccc---ccccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCC--CCCCHH
Confidence              344566666655544   4788888999999999999999999999999999999999999999987532  222333


Q ss_pred             HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh-hHHHHH
Q 015283          239 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA-LFDEWK  317 (410)
Q Consensus       239 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~-~~~~~~  317 (410)
                      .+.+..++++++.|+||.+++||+|+||+++   ++++++.+.+..    .....+++.+.|.++...+.+.. +.+.+.
T Consensus       228 ~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~---~~~~~~~l~~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~  300 (418)
T d1w7la_         228 SLPGMWERTLTIGSAGKTFSATGWKVGWVLG---PDHIMKHLRTVH----QNSVFHCPTQSQAAVAESFEREQLLFRQPS  300 (418)
T ss_dssp             GSTTTGGGEEEEEEHHHHTTCGGGCCEEEEC---CHHHHHHHHHHH----HTTTSCCCHHHHHHHHHHHHHHHHTTTSTT
T ss_pred             HccccccccceecccCccccCCCCccccccc---chhhhhhhcccc----ccccccccchhhHHHHHHhhhccccccccc
Confidence            4444456899999999999999999999754   777666655433    33345678888888776665432 222234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------------------CHHHHHHhhhcCcEEE
Q 015283          318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------------------NKAQSDNMTNKWHVYM  379 (410)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~ll~~~gi~v  379 (410)
                      +++...++.++++++.+.+.|. +.|    +++..|++|+|+|+++                  +.++++++++++||.+
T Consensus       301 ~~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v  375 (418)
T d1w7la_         301 SYFVQFPQAMQRCRDHMIRSLQ-SVG----LKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVA  375 (418)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHH-TTT----CEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEEC
T ss_pred             cccccchhhhhhhhhhhhhhhh-hcC----CcccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEE
Confidence            5567888999999999999999 887    5788899999999743                  2456889999999999


Q ss_pred             cCC-------------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283          380 TKD-------------G--RISLAGLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       380 ~~~-------------g--Ris~~~~~~~~i~~~~~~l~~~l~  407 (410)
                      .||             +  |||++. +++++++++++|++...
T Consensus       376 ~PG~~F~~~~~~~~~~~~iRis~~~-~~~~l~~a~~rl~~~~~  417 (418)
T d1w7la_         376 IPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQAMDEKLRKWKV  417 (418)
T ss_dssp             EEGGGGSCHHHHTTSCSEEEEECCC-CHHHHHHHHHHHHHHHC
T ss_pred             EcchhhcCCCccCCCCCEEEEEEcC-CHHHHHHHHHHHHHHhc
Confidence            886             1  999986 88999999999998754

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=9.5e-46  Score=355.05  Aligned_cols=354  Identities=13%  Similarity=0.152  Sum_probs=270.8

Q ss_pred             hhhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----------CCCccCcCCcccHHHHHHHHHHhcCCCCC
Q 015283           28 FKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----------GENKEYLPIEGLAAFNKVTAELLFGADNS   96 (410)
Q Consensus        28 ~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~lr~aia~~~~~~~~~   96 (410)
                      |+...|| ++|+|+++++      +.+.+.+.+.+.+....          .....|++..|.++||++||+|+.+.++.
T Consensus        29 ~~~~~np~G~i~l~~aen------~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~  102 (428)
T d1iaya_          29 FHPLKNPNGVIQMGLAEN------QLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGG  102 (428)
T ss_dssp             CCSSSSTTSBEECSSCCC------CSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTT
T ss_pred             CCCcCCCCceEEeecccC------ccchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCC
Confidence            3344455 6999999876      33345555554442211          01257999999999999999999877764


Q ss_pred             --cccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHHHH
Q 015283           97 --VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus        97 --~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                        .+++++|++  |+|+++++..++  ...+.+||+|++++|+|+.|...+. ..|++++.+++...+++.+|.+.++..
T Consensus       103 ~~~~~~e~Ivi--t~G~~~al~~~~--~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~  178 (428)
T d1iaya_         103 RVRFDPERVVM--AGGATGANETII--FCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEA  178 (428)
T ss_dssp             CSCCCTTSCEE--EEHHHHHHHHHH--HHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHH
T ss_pred             CCCCChhhEEE--cCCHHHHHHHHH--HHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccch
Confidence              467889999  999999999984  4447799999999999999988777 458899999987777899999988765


Q ss_pred             Hhc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-------c
Q 015283          174 IKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-------R  243 (410)
Q Consensus       174 i~~---~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-------~  243 (410)
                      +..   ..++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++.  ...++..+..       .
T Consensus       179 ~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~--~~~s~~~~~~~~~~~~~~  256 (428)
T d1iaya_         179 YENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP--QFVSIAEILDEQEMTYCN  256 (428)
T ss_dssp             HHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS--CCCCHHHHHTSGGGTTSC
T ss_pred             hhhhhccCCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcc--cccccccccchhhccccc
Confidence            432   345778888899999999999999999999999999999999999999887532  2222222221       3


Q ss_pred             CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                      .+++++++||||.|+++|+|+||+  ++.++++.+.+... .     .....+...+.++...+.+.+..   .+++++.
T Consensus       257 ~~~vi~~~s~SK~~~~~GlRiG~~--~~~~~~l~~~~~~~-~-----~~~~~~~~~~~~~~a~l~~~~~~---~~~~~~~  325 (428)
T d1iaya_         257 KDLVHIVYSLSKDMGLPGFRVGII--YSFNDDVVNCARKM-S-----SFGLVSTQTQYFLAAMLSDEKFV---DNFLRES  325 (428)
T ss_dssp             TTSEEEEEESTTTSSCGGGCEEEE--EESCHHHHHHHHHH-H-----TTSCCCHHHHHHHHHHTTCHHHH---HHHHHHH
T ss_pred             cceEEEEecCCCcccCCCcccccc--cccccchhhhhhhh-h-----cccccccccccchhhhhhhhccc---ccccccc
Confidence            458999999999999999999998  44555544433222 1     23345566666666667765543   4456788


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------HHHHHHhhhcCcEEEcCC--------C-
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------KAQSDNMTNKWHVYMTKD--------G-  383 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~~--------g-  383 (410)
                      ++.++++++.+.+.|+ ..|    +++..|++|+|+|+++.           .++++++++++||.+.||        | 
T Consensus       326 ~~~l~~r~~~~~~~L~-~~g----i~~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~  400 (428)
T d1iaya_         326 AMRLGKRHKHFTNGLE-VVG----IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGW  400 (428)
T ss_dssp             HHHHHHHHHHHHHHHH-HTT----CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSE
T ss_pred             ccccchhHHHHHHHHH-hCC----CEEecCCcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCE
Confidence            8899999999999998 887    57788999999998651           245778888899999986        2 


Q ss_pred             -eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          384 -RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 -Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       |||++..++++++++++||++++...
T Consensus       401 ~Ris~a~~~~~~l~~al~Rl~~~l~~~  427 (428)
T d1iaya_         401 FRVCFANMDDGTVDIALARIRRFVGVE  427 (428)
T ss_dssp             EEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCCCHHHHHHHHHHHHHHHhhc
Confidence             99998767778999999999998754

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=1.7e-46  Score=356.75  Aligned_cols=348  Identities=12%  Similarity=0.117  Sum_probs=266.9

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +.++|+|+.|+|    .+|+ |+.+++++.++++.+. ++|+  .|.++||+++++++.+.+|..+++++|++  |+|++
T Consensus        30 g~~vi~l~~g~p----df~~-p~~v~~al~~~~~~~~-~~Y~--~g~~~Lr~aia~~~~~~~g~~~~~~~I~v--t~G~~   99 (394)
T d1c7na_          30 GNEVVPLSVADM----EFKN-PPELIEGLKKYLDETV-LGYT--GPTEEYKKTVKKWMKDRHQWDIQTDWIIN--TAGVV   99 (394)
T ss_dssp             CTTCCCCCSSSC----SSCC-CHHHHHHHHHHHHHCC-CSSB--CCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESSHH
T ss_pred             CCCeEEccCCCC----CCCC-CHHHHHHHHHHHhCCC-cCCC--CCCHHHHHHHHHHHHHhcCCCCCCcceEe--eccch
Confidence            357999999998    4544 7999999998887665 7785  47889999999999888888899999999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      +++.++  +...+.|||+|+++.|.|.++...+...|.+.+.++... +..+.+|.+.++..+..  ++++++++|+|||
T Consensus       100 ~al~~~--~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~i~l~~P~N  175 (394)
T d1c7na_         100 PAVFNA--VREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD--KNNKALLFCSPHN  175 (394)
T ss_dssp             HHHHHH--HHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC--TTEEEEEEESSBT
T ss_pred             hhhhhh--hccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhcc--ccceEEEeccccc
Confidence            999998  444578999999999999999999999999888877643 34567888888887764  4678888999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      |||.+++.+++++|+++|++++++||+||+|.++.+++..... ..........+++++.|+||.++++|+|+||+  ++
T Consensus       176 PTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~--~~  252 (394)
T d1c7na_         176 PVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNI--II  252 (394)
T ss_dssp             TTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE--EC
T ss_pred             ccceeccHHHhhhhhccccccceeEeccccccccccCCccccc-hhhhhcccccceeecccccccccccccccccc--cc
Confidence            9999999999999999999999999999999999875322211 11111223468999999999999999999998  55


Q ss_pred             CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283          272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI  351 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~  351 (410)
                      +++++.+.+.....    .....+....+.+++..... .    ..+..++.++.++++++.+.+.++ ..+.  .+.+.
T Consensus       253 ~~~~i~~~~~~~~~----~~~~~~~~~~~~~a~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~l~-~~~~--~~~~~  320 (394)
T d1c7na_         253 KNPDIRERFTKSRD----ATSGMPFTTLGYKACEICYK-E----CGKWLDGCIKVIDKNQRIVKDFFE-VNHP--EIKAP  320 (394)
T ss_dssp             CCHHHHHHHHHHHH----HTTCCCCCHHHHHHHHHHHH-H----CHHHHHHHHHHHHHHHHHHHHHHH-HHCT--TSBCC
T ss_pred             cChhhhhhhhhhhh----hccccccccccchhhhhhhc-c----hhhhhcccccccchhhhhhhhhhh-cccc--ceeec
Confidence            56665444433222    12233333333333222111 1    133456777788888888888777 5542  25677


Q ss_pred             cCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhhhcC
Q 015283          352 LRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNVS  410 (410)
Q Consensus       352 ~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~~~~  410 (410)
                      .|++++|+|+.+     + .+++++|++++||.+.||        +  |||++. +++++++++++|+++++++.
T Consensus       321 ~p~g~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~-~~e~i~eal~rl~~~l~~Lk  394 (394)
T d1c7na_         321 LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDLK  394 (394)
T ss_dssp             CCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCceeEEEEECCCCCCCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHHhcC
Confidence            889999999743     4 456788888889999986        1  999976 88999999999999998763

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=6.1e-46  Score=356.74  Aligned_cols=353  Identities=16%  Similarity=0.177  Sum_probs=271.0

Q ss_pred             hhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhc------c-----CCCccCcCCcccHHHHHHHHHHhcCCCC-
Q 015283           29 KADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE------R-----GENKEYLPIEGLAAFNKVTAELLFGADN-   95 (410)
Q Consensus        29 ~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~------~-----~~~~~y~~~~g~~~lr~aia~~~~~~~~-   95 (410)
                      +...|| ++|+|+++++      +.+.+.+.+.+.+...      .     .....|++..|.++||+++|+++.+.++ 
T Consensus        30 ~~~~np~G~i~l~~~en------~l~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~  103 (431)
T d1m7ya_          30 HEVHNTNGIIQMGLAEN------QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGN  103 (431)
T ss_dssp             CSSSCTTSBEECSSCCC------CSCHHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTT
T ss_pred             CCcCCCCcEEEeecccc------cccHHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCC
Confidence            333455 5899999886      3334555555443110      0     0124699999999999999999987765 


Q ss_pred             -CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCCCccceeeecCCCcccChhhHHHH
Q 015283           96 -SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARVPWSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus        96 -~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                       ..+++++|++  |+|+++++.+++.  ..+.|||+|++++|+|+.+...+.. .|.+++.+++.+++++.+|++.+++.
T Consensus       104 ~~~~~pe~I~i--t~G~~~al~~~~~--~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~  179 (431)
T d1m7ya_         104 KVTFDPNHLVL--TAGATSANETFIF--CLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEA  179 (431)
T ss_dssp             SSCCCGGGEEE--EEHHHHHHHHHHH--HHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHH
T ss_pred             CCCCCcceEEE--CCCHHHHHHHHHH--HhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhh
Confidence             4567899999  9999999999843  3477999999999999999888874 57889999987777889999998877


Q ss_pred             Hhc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh--------
Q 015283          174 IKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT--------  242 (410)
Q Consensus       174 i~~---~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~--------  242 (410)
                      +.+   ...++++++++|||||||.+++.+++++|+++|+++|++||+||+|..+.+++.  ...++..+..        
T Consensus       180 ~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~--~~~s~~~~~~~~~~~~~~  257 (431)
T d1m7ya_         180 YQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP--SFISVMEVLKDRNCDENS  257 (431)
T ss_dssp             HHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS--CCCCHHHHTTTTTCSSSS
T ss_pred             hhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeecccccccccCCC--CCCCHHHHhhhccccccc
Confidence            653   345678888999999999999999999999999999999999999999887532  2222222221        


Q ss_pred             -cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283          243 -RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME  321 (410)
Q Consensus       243 -~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~  321 (410)
                       ..+++++++|+||.||++|+|+||++.   +++.+........     .+..++...+.++...+.+....   .+++.
T Consensus       258 ~~~~~vi~~~s~SK~~~~~G~RiG~~~~---~~~~i~~~~~~~~-----~~~~~~~~~~~~~~a~l~~~~~~---~~~~~  326 (431)
T d1m7ya_         258 EVWQRVHVVYSLSKDLGLPGFRVGAIYS---NDDMVVAAATKMS-----SFGLVSSQTQHLLSAMLSDKKLT---KNYIA  326 (431)
T ss_dssp             SGGGGEEEEEESSSSSCCGGGCEEEEEE---SCHHHHHHHHHHG-----GGSCCCHHHHHHHHHHHHCHHHH---HHHHH
T ss_pred             ccCceEEEEecCcccccCCCCccceecc---chhhhHHHHHHHh-----ccccccccccchhhhhhccchhh---hhhhh
Confidence             224899999999999999999999844   5554433333222     23445566666666666655443   45567


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----------CHHHHHHhhhcCcEEEcCC--------
Q 015283          322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----------NKAQSDNMTNKWHVYMTKD--------  382 (410)
Q Consensus       322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ll~~~gi~v~~~--------  382 (410)
                      +.+++++++++.+.+.|+ +.|    +.+.++++|+|+|+++           +.++++++++++||.+.||        
T Consensus       327 ~~~~~~~~~~~~l~~~L~-~~g----i~~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~  401 (431)
T d1m7ya_         327 ENHKRLKQRQKKLVSGLQ-KSG----ISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEP  401 (431)
T ss_dssp             HHHHHHHHHHHHHHHHHH-TTT----CEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSST
T ss_pred             hhhhhhhhhhhhhhhhhh-cCC----cEEecCCceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEeccccCCCCC
Confidence            889999999999999999 887    5788899999999865           1246788998899999986        


Q ss_pred             C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          383 G--RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       383 g--Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |  ||+++..+++++++++++|++++++.
T Consensus       402 ~~~Ri~~a~~~e~~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         402 GWFRVCFANLPERTLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             TEEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCcCCHHHHHHHHHHHHHHHHHh
Confidence            2  99998767789999999999998864

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=7.8e-46  Score=351.83  Aligned_cols=362  Identities=12%  Similarity=0.085  Sum_probs=279.3

Q ss_pred             ccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283           10 FEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA   87 (410)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia   87 (410)
                      +.|+.+..+++|.++.....+  ..+.++|+|+.|.|    .+++ |+.+++++.+... + .++|++..|.++||++++
T Consensus         2 ~~r~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~p----~~~~-p~~~~~al~~~~~-~-~~~Y~~~~G~~~LR~aia   74 (389)
T d2gb3a1           2 SDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQP----DLKT-PEVFFERIYENKP-E-VVYYSHSAGIWELREAFA   74 (389)
T ss_dssp             CHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCC----CSCC-CTHHHHHHHHTCC-S-SCCCCCTTCCHHHHHHHH
T ss_pred             ChhhhcCCCCHHHHHHHHHHHHHHcCCCEEECCCCCC----CCCC-CHHHHHHHHhcCC-C-CCCCCCCcCCHHHHHHHH
Confidence            456778888889888754443  23457899999998    4443 7888888887653 3 478999999999999999


Q ss_pred             HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283           88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF  167 (410)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  167 (410)
                      +++...+|..+++++|++  |+|+++++..+.  ...+.+||.|++++|+|+.+...+...|..++.++..+ +++..+.
T Consensus        75 ~~~~~~~g~~~~~~~I~i--t~G~~~~l~~~~--~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~  149 (389)
T d2gb3a1          75 SYYKRRQRVDVKPENVLV--TNGGSEAILFSF--AVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRM-EEGFAIP  149 (389)
T ss_dssp             HHHHHTSCCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCG-GGTSCCC
T ss_pred             HHHHHhcCCCcccceEEe--cccccccccccc--cccccCCCeEEEeCCCCccccccccccCcccccccccc-ccccchh
Confidence            999888899999999999  999999999983  44477999999999999999999999999988888743 3333344


Q ss_pred             hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +.+...+.   +++.+++++|||||||.+++.+++++|+++|++|+++||+||+|..+.+++...   +  ......+++
T Consensus       150 ~~~~~~~~---~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~---~--~~~~~~~~~  221 (389)
T d2gb3a1         150 QNLESFIN---ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFA---S--ALSIESDKV  221 (389)
T ss_dssp             TTGGGGCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC---C--GGGSCCTTE
T ss_pred             hhhhhhcc---cCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccc---c--ccccccccc
Confidence            44444443   377888889999999999999999999999999999999999999998753211   1  223345689


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      +++.|+||.+++||+|+||+  ++.++.+.+.+... .   . ....++...+.++..++...      ++++++.++.+
T Consensus       222 ~v~~s~sK~~~~~GlRiG~~--~~~~~~i~~~~~~~-~---~-~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~  288 (389)
T d2gb3a1         222 VVIDSVSKKFSACGARVGCL--ITRNEELISHAMKL-A---Q-GRLAPPLLEQIGSVGLLNLD------DSFFDFVRETY  288 (389)
T ss_dssp             EEEEESTTTTTCGGGCCEEE--ECSCHHHHHHHHHH-H---H-HSCCCCHHHHHHHHHHHTCC------HHHHHHHHHHH
T ss_pred             cccccccccccCcccceeee--eccchhHHHHHhhh-h---h-cccccccccccccccccccc------chhcccccccc
Confidence            99999999999999999998  44454433332221 1   1 23355666666666666543      34567888999


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---C-HHHHHHhhhc-----CcEEEcCC-----------C--eE
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---N-KAQSDNMTNK-----WHVYMTKD-----------G--RI  385 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ll~~-----~gi~v~~~-----------g--Ri  385 (410)
                      +++++.+.+.|+ ++|.   ..+..|++++|+|+.+   + .+++.+++++     .||.+.||           +  ||
T Consensus       289 ~~~~~~~~~~L~-~~~~---~~~~~p~~g~~~~~~lp~~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRi  364 (389)
T d2gb3a1         289 RERVETVLKKLE-EHGL---KRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRI  364 (389)
T ss_dssp             HHHHHHHHHHHH-HTTC---CCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEE
T ss_pred             cccchhhhhhhh-hhcc---ccccCCCceEEEEEeCCCCCHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEE
Confidence            999999999999 8874   3567789999999865   2 4567777664     47777664           1  99


Q ss_pred             EecCCCcccHHHHHHHHHHHhhhc
Q 015283          386 SLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       386 s~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +++. +++++++++++|++++++.
T Consensus       365 s~~~-~~~~l~~a~~~L~~~lk~f  387 (389)
T d2gb3a1         365 ACVL-EKDLLSRAIDVLMEGLKMF  387 (389)
T ss_dssp             ECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             EEcC-CHHHHHHHHHHHHHHHHHh
Confidence            9975 8999999999999998763

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-46  Score=353.44  Aligned_cols=337  Identities=12%  Similarity=0.126  Sum_probs=276.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt  112 (410)
                      +++|||+.|.|    .+++ |+.+++++.+.+..+. ++|++..|.++||+++++++.+.+|..++++ +|++  |+|++
T Consensus        26 ~~~i~l~~G~P----d~~~-p~~i~~a~~~~~~~~~-~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~v--t~G~~   97 (382)
T d1u08a_          26 HQAINLSQGFP----DFDG-PRYLQERLAHHVAQGA-NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITV--TAGAT   97 (382)
T ss_dssp             TTCEECCCSSC----SSCC-CHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEE--ESSHH
T ss_pred             CCCEEccCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEe--ccchH
Confidence            57899999999    4554 7889999988887665 7899999999999999999988888887776 5988  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++.++  +...+.+||.|++++|+|..+...+...|.....++. +++++.+|+++++..+.+   +++++++++||||
T Consensus        98 ~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~---~~~~i~l~~P~NP  171 (382)
T d1u08a_          98 EALYAA--ITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMAL-QPPHFRVDWQEFAALLSE---RTRLVILNTPHNP  171 (382)
T ss_dssp             HHHHHH--HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-CTTTCCCCHHHHHHHCCT---TEEEEEEESSCTT
T ss_pred             HHHHHH--HhhcccccceEEEecccccchhhhhhhccccceeccc-ccccccCCHHHHhhhhcc---CccEEEECCCCcc
Confidence            999998  4445779999999999999999999999988877776 456778899999888775   7788888999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.+++++|+++|.+++++++.|++|..+.+.+....  .........++++++.|+||.+++||+|+||+++   
T Consensus       172 tG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~---  246 (382)
T d1u08a_         172 SATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHA--SVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA---  246 (382)
T ss_dssp             TCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCC--CGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEEC---
T ss_pred             cccccccccchhhhhhhccccceeeeecchhhccccccccc--cccccccccCcEEEEeeccccccCCcccchhhhc---
Confidence            99999999999999999999999999999998876532221  1112223446899999999999999999999754   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++++.....    ....+++...|.++..++.+.      .+++++.++.++++++.+.+.+. ..|    +.+..
T Consensus       247 ~~~~~~~~~~~~~----~~~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~~~-~~g----~~~~~  311 (382)
T d1u08a_         247 PAPISAEIRKVHQ----YLTFSVNTPAQLALADMLRAE------PEHYLALPDFYRQKRDILVNALN-ESR----LEILP  311 (382)
T ss_dssp             CHHHHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHC------THHHHTHHHHHHHHHHHHHHHTT-SSS----CEECC
T ss_pred             cchhHHHHHhhhc----ccccccccccccccccccccc------hHHHHHHHHHHHhhhhhhhhhhc-cCC----cEEec
Confidence            7786666554332    234568888888887777643      23457888999999999999988 777    57888


Q ss_pred             CCcceeeecCC------C-HHHHHHhhhcCcEEEcCCC------------eEEecCCCcccHHHHHHHHHHH
Q 015283          353 RQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG------------RISLAGLSLAKCEYLADAIIDS  405 (410)
Q Consensus       353 ~~~~~~~~~~~------~-~~~~~~ll~~~gi~v~~~g------------Ris~~~~~~~~i~~~~~~l~~~  405 (410)
                      |++|+|+|+.+      + .++++++++++||.+.||.            |||++. +++++++++++|+++
T Consensus       312 p~gg~~~~~~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~-~~e~l~~al~RL~~l  382 (382)
T d1u08a_         312 CEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQL  382 (382)
T ss_dssp             CCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTTC
T ss_pred             CCceEEEEEecCCCCCCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHhCC
Confidence            99999999743      2 4568889988999999861            999986 889999999999863

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.4e-45  Score=343.90  Aligned_cols=343  Identities=15%  Similarity=0.067  Sum_probs=265.7

Q ss_pred             eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      +|+|++|++    .+|. |+.+++++.+.+..+. .+|++..| +++|+++++++.+.+|..+++++|++  |+|+++++
T Consensus         1 ~~~~~~~~~----df~~-p~~i~eal~~~~~~~~-~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G~~~~l   71 (361)
T d1d2fa_           1 LLPFTISDM----DFAT-APCIIEALNQRLMHGV-FGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVY--GPSVIYMV   71 (361)
T ss_dssp             CEECCSSSC----SSCC-CHHHHHHHHHHHTTCC-CCCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEE--ESCHHHHH
T ss_pred             CcCcCCCCC----CCCC-CHHHHHHHHHHHhCCC-CCCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEE--eCCHHHHH
Confidence            589999998    4554 7899999999887665 68988888 67999999999998899999999999  99999999


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283          116 RLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG  194 (410)
Q Consensus       116 ~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG  194 (410)
                      ..+.  ...+.+||+|++++|+|+.|..+++..|.+++.++... .+++.+|++.+++.+.+  ++++++++++||||||
T Consensus        72 ~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~--~~~~~i~l~~p~NPTG  147 (361)
T d1d2fa_          72 SELI--RQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK--PECKIMLLCSPQNPTG  147 (361)
T ss_dssp             HHHH--HHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS--TTEEEEEEESSCTTTC
T ss_pred             HHHh--hhccccccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhccc--CCceeEEecccccccc
Confidence            9873  33467999999999999999999999999998887754 35677999999998875  5777888899999999


Q ss_pred             CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283          195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS  274 (410)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~  274 (410)
                      .++|.+++++|+++|+++|++||+||+|.++.+++....  .+  .....++++++.|+||.++++|+|+||+.  +.++
T Consensus       148 ~~~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~--~~--~~~~~~~~v~~~s~SK~~~~~g~R~g~~~--~~~~  221 (361)
T d1d2fa_         148 KVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHI--PW--SNVARGDWALLTSGSKSFNIPALTGAYGI--IENS  221 (361)
T ss_dssp             CCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCC--CG--GGTCCSSEEEEECSHHHHTCGGGCCEEEE--ECSH
T ss_pred             cccchhhhhhhhhhhhhhheeeeeccccccccccccccc--cc--ccccccccccccccccccccccccceeee--cchh
Confidence            999999999999999999999999999999987532211  11  12234689999999999999999999984  3444


Q ss_pred             hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                      ...++....+...  ...+.++..++.++...+...      .+..++.+..++++++.+.+.+. +...  .+.+..|+
T Consensus       222 ~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~------~~~~~~~~~~~~~r~~~~~~~~~-~~~~--~~~~~~p~  290 (361)
T d1d2fa_         222 SSRDAYLSALKGR--DGLSSPSVLALTAHIAAYQQG------APWLDALRIYLKDNLTYIADKMN-AAFP--ELNWQIPQ  290 (361)
T ss_dssp             HHHHHHHHHHHTT--SCCCSCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCS--SCCCCCCS
T ss_pred             HHHHHHhhhcccc--cccccchhhhHHHHHHHhhcc------chhhhcccccchhhHHHHHHHhh-hhcc--cccccccC
Confidence            4444444433311  122234444443333222211      23346777778888888877776 4431  24667889


Q ss_pred             cceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          355 IGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       355 ~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      +|+|+|+.+     + .+++.+|++++||.+.||.          |||++. +++++++++++|+++++++
T Consensus       291 gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis~~~-~~e~l~~al~rl~~~l~~l  360 (361)
T d1d2fa_         291 STYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAV  360 (361)
T ss_dssp             BCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEEccCCCCCHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHHhc
Confidence            999999754     4 4567888898999999861          999975 8899999999999999875

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.2e-45  Score=346.06  Aligned_cols=355  Identities=17%  Similarity=0.116  Sum_probs=279.6

Q ss_pred             cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283            7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT   86 (410)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai   86 (410)
                      |.++.+....+...+..+.+....   .+.|||+.|.|    +.++ |+.+++++.+.+..  .++|++..|.++||+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~la~~---~~~I~ls~g~p----~~~~-p~~i~~al~~~l~~--~~~Y~~~~G~~elr~ai   70 (368)
T d1v2da_           1 MRLHPRTEAAKESIFPRMSGLAQR---LGAVNLGQGFP----SNPP-PPFLLEAVRRALGR--QDQYAPPAGLPALREAL   70 (368)
T ss_dssp             CCCCGGGGGC---CHHHHHHHHHH---HTCEECCCCSC----SSCC-CHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHH
T ss_pred             CCCChhhhhcCCCHHHHHHHHhcc---CCCEEecCCCC----CCCC-CHHHHHHHHHHhhc--ccCCCCCcCCHHHHHHH
Confidence            667777777777544444432222   36899999998    4443 79999999988754  37899999999999999


Q ss_pred             HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCccc
Q 015283           87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGL  165 (410)
Q Consensus        87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~  165 (410)
                      ++++.      +++++|++  |+|+++++..++  ...+.+||.|++++|+|+.+...+...|.+++.+++.. .+++.+
T Consensus        71 A~~~~------~~~~~Iii--t~G~~~al~~~~--~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  140 (368)
T d1v2da_          71 AEEFA------VEPESVVV--TSGATEALYVLL--QSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRL  140 (368)
T ss_dssp             HHHHT------SCGGGEEE--ESSHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEEC
T ss_pred             Hhhcc------cCCcceee--ccchHHHHHHHh--hccccccccccccCCcchhhhhHHHhcCCccceeccccccccccC
Confidence            99974      24789999  999999999984  34477999999999999999999999999988887743 456789


Q ss_pred             ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      |++.+++.+++   .+.++++++||||||.+++.+++++|+++|++||+++|+||+|..+.......   .  ......+
T Consensus       141 d~~~l~~~~~~---~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~---~--~~~~~~~  212 (368)
T d1v2da_         141 DLSALEKALTP---RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPR---R--LREFAPE  212 (368)
T ss_dssp             CHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC---C--HHHHCTT
T ss_pred             CHHHHHHhhcc---CceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhccccccc---c--ccccccc
Confidence            99999988875   67778889999999999999999999999999999999999998776542211   1  1233556


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      +++++.|+||.++++|+|+||++.   ++++++.+.....    ....+++...|.++..++.....    .+++++.++
T Consensus       213 ~~~~~~~~sk~~~~~G~R~g~~~~---~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~  281 (368)
T d1v2da_         213 RTFTVGSAGKRLEATGYRVGWIVG---PKEFMPRLAGMRQ----WTSFSAPTPLQAGVAEALKLARR----EGFYEALRE  281 (368)
T ss_dssp             TEEEEEEHHHHTTCGGGCCEEEEC---CTTTHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHHHH----TTHHHHHHH
T ss_pred             ccceeecccccccccccccccccc---cccccchhhhhhh----ccccccccccccccccccccccc----hhhHHHHHH
Confidence            888999999999999999999744   7776666555433    22336677777776666654332    345678889


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC----------C--eEEecCCCcc
Q 015283          326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD----------G--RISLAGLSLA  393 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~  393 (410)
                      .++++++++.+.|+ +.|    +++..|++++|+|++++.....++++++||.+.||          +  |||++. +++
T Consensus       282 ~~~~~~~~l~~~l~-~~g----~~~~~p~g~~~~~~~l~~~~~~~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~-~~e  355 (368)
T d1v2da_         282 GYRRRRDLLAGGLR-AMG----LRVYVPEGTYFLMAELPGWDAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEE  355 (368)
T ss_dssp             HHHHHHHHHHHHHH-HTT----CCEECCSBSSEEEEECTTCCHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHH
T ss_pred             HHHHhhhhhhhhHH-hcC----cEEecCCceeEEEEeCCccHHHHHHHhCCEEEEechhhCCCCCCCCEEEEEecC-CHH
Confidence            99999999999999 888    57788999999999875444566788889999885          1  999986 899


Q ss_pred             cHHHHHHHHHHHh
Q 015283          394 KCEYLADAIIDSY  406 (410)
Q Consensus       394 ~i~~~~~~l~~~l  406 (410)
                      ++++++++|++++
T Consensus       356 ~i~~ai~rL~~~l  368 (368)
T d1v2da_         356 ELHLALERLGRVV  368 (368)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999875

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=3.3e-44  Score=342.11  Aligned_cols=353  Identities=14%  Similarity=0.129  Sum_probs=266.4

Q ss_pred             CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283           32 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL  109 (410)
Q Consensus        32 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~  109 (410)
                      ..+++|||+.|.| +....|  .+.+.+++.+.+...  ....|++..|.++||+++++++.+.+|..+++++|++  |+
T Consensus        27 ~~~~~i~l~~G~P-~~~~~P--~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~~~~g~~~~~~~I~i--t~  101 (403)
T d1wsta1          27 ETSDVISLAGGLP-APETFP--VETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMT--VA  101 (403)
T ss_dssp             TSSSCEECCCCCC-CGGGSC--HHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHHHHHCCCCTTCEEEE--ES
T ss_pred             CCCCcEECCCCCC-CccccC--HHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHHHHhCCCCChHHeee--cc
Confidence            3478999999988 222222  467777777765331  1266999999999999999999888888899999999  99


Q ss_pred             ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH-HHHHhcCCCCcEEEEeCC
Q 015283          110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM-IADIKAAPGGSFILLHGC  188 (410)
Q Consensus       110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l-~~~i~~~~~~~~~ii~~~  188 (410)
                      |+++++..+..  ..+.+||.|++++|+|..|...+...|.+++.++..+...+....... +......++...++++++
T Consensus       102 G~~~al~~~~~--~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (403)
T d1wsta1         102 GSQQALDLIGR--VFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVST  179 (403)
T ss_dssp             SHHHHHHHHHH--HHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCCCEEEECCS
T ss_pred             cchHHHHHHHH--HHhhcCCccccCCCcchhhhHHHhhccccceeEeecccCCccccccccchhhhhccccccccccccc
Confidence            99999999843  347799999999999999999999999999999985433222222222 233333345677888899


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      ||||||.++|.+++++|+++|++|+++||+||+|.++.+++...  .++ ...+..+++++++|+||.++ +|+|+||++
T Consensus       180 p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~--~~~-~~~~~~~~~i~~~S~SK~~~-~G~RiG~~i  255 (403)
T d1wsta1         180 FQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPT--PPI-KHFDDYGRVIYLGTFSKILA-PGFRIGWVA  255 (403)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC--CCG-GGGCSSSCEEEEEESTTTTC-GGGCCEEEE
T ss_pred             cCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCC--Ccc-cccCCCCcEEEEccccceec-Ccccccccc
Confidence            99999999999999999999999999999999999998753221  122 22345569999999999996 999999986


Q ss_pred             EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                      +   ++++++.+.....    .....++...+.+....+.....    .+++++.++.++++++.+.+.|. +.... .+
T Consensus       256 ~---~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~-~~~~~-~~  322 (403)
T d1wsta1         256 A---HPHLIRKMEIAKQ----SIDLCTNTFGQAIAWKYVENGYL----DEHIPKIIEFYKPRRDAMLEALE-EYMPE-GV  322 (403)
T ss_dssp             E---CHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHHTTHH----HHHHHHHHHHHHHHHHHHHHHHH-HHCCT-TC
T ss_pred             c---chHHHHHHHHHHh----hhccccccchhhhHHhhhhcccc----chhHHHHHHHHHHHHHHHHHHHH-hhccC-Ce
Confidence            5   7786666544333    23345666666666555555433    45567888888889999999888 65321 25


Q ss_pred             ccccCCcceeeecCC----CHHHHHHhhhcCcEEEcCC----------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283          349 SFILRQIGMFSFTGL----NKAQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       349 ~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      .+..|.+|+|+|+.+    +.+.+.+++.++||.+.||          +  ||+++..+++++++++++|++++++
T Consensus       323 ~~~~p~gg~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~~l~~  398 (403)
T d1wsta1         323 EWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKE  398 (403)
T ss_dssp             EECCCSBSSEEEEECCTTCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCceeEEEEECCCCCCHHHHHHHHHHCCEEEEechhhcCCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence            677899999999854    3344444444569999886          1  9999877889999999999999875

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.7e-44  Score=344.54  Aligned_cols=366  Identities=15%  Similarity=0.168  Sum_probs=272.4

Q ss_pred             CCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcC
Q 015283           15 MAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFG   92 (410)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~   92 (410)
                      ...++.|.++.   +...++++|||+.|.| |...+|  .+.+.+++.+.++..  ...+|++..|.++||+++++++.+
T Consensus        22 ~~~~s~ir~~~---~~~~~~~~I~l~~G~P-d~~~~P--~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   95 (420)
T d1vp4a_          22 NMKSSIIREIL---KFAADKDAISFGGGVP-DPETFP--RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLER   95 (420)
T ss_dssp             TCCCCCHHHHT---TTTTSTTCEECCCCSC-CGGGSC--HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hCCCcHHHHHH---HHhCCCCcEecCCcCC-CCccCC--HHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHHH
Confidence            34555554443   3345678999999998 323222  356666666665332  236799999999999999999987


Q ss_pred             CCCCc-ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHH
Q 015283           93 ADNSV-LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI  171 (410)
Q Consensus        93 ~~~~~-~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  171 (410)
                      .+|.. +++++|++  |+|+++++.+++  ...+.+||.|++++|+|+.|...++..|.+++.+++.+   .++|++.+.
T Consensus        96 ~~g~~~~~~~~I~i--t~G~~~al~~~~--~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~---~~~~~~~l~  168 (420)
T d1vp4a_          96 MYGITGLDEDNLIF--TVGSQQALDLIG--KLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLED---DGMDLNVLE  168 (420)
T ss_dssp             HHCCCSCCGGGEEE--EEHHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET---TEECHHHHH
T ss_pred             HhCCCCCCHHHeEe--ccchhhhHHHHH--HhhhccccccccccccccchhHHHHHHhhhcccccccc---cccccchhh
Confidence            77765 67899999  999999999983  44477999999999999999999999999999999843   346777665


Q ss_pred             HHHhc------CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283          172 ADIKA------APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM  245 (410)
Q Consensus       172 ~~i~~------~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~  245 (410)
                      ..+..      .++.+.++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++....  +. ......+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~--~~-~~~~~~~  245 (420)
T d1vp4a_         169 RKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVD--PI-FKIGGPE  245 (420)
T ss_dssp             HHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCC--CH-HHHHCTT
T ss_pred             hhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccc--cc-ccccccc
Confidence            54322      123466777899999999999999999999999999999999999999987532111  11 2234556


Q ss_pred             cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283          246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG  325 (410)
Q Consensus       246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  325 (410)
                      ++++++|+||.++ +|+|+||+++   ++++++++.+...    ....+++...|.+++..+.+...    .+++++.++
T Consensus       246 ~~i~~~s~sk~~~-~G~RiG~~~~---~~~~i~~l~~~~~----~~~~~~~~~~q~~~a~~l~~~~~----~~~~~~~~~  313 (420)
T d1vp4a_         246 RVVLLNTFSKVLA-PGLRIGMVAG---SKEFIRKIVQAKQ----SADLCSPAITHRLAARYLERYDL----LEQLKPTIE  313 (420)
T ss_dssp             TEEEEEESTTTTC-GGGCEEEEEC---CHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHHHSCH----HHHTHHHHH
T ss_pred             ceeEEeccccccc-cccccccccc---cchhhhhhhhhhh----hccccCchhhhhhhhhhcccccc----cccchhHHH
Confidence            8999999999885 9999999744   8887776655433    22335677777777777665543    455667777


Q ss_pred             HHHHHHHHHHHHhhhccCCC-CCcccccCCcceeeecCC----CHHHHHHhhhcCcEEEcCC----------C--eEEec
Q 015283          326 RIKNVRQKLFDSLSAKDKSG-KDWSFILRQIGMFSFTGL----NKAQSDNMTNKWHVYMTKD----------G--RISLA  388 (410)
Q Consensus       326 ~~~~~~~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~~----------g--Ris~~  388 (410)
                      .++++++.+.+.|+ +.... ..+++..|++|+|+|+.+    +...+.++++++||.+.||          +  |||++
T Consensus       314 ~~~~~~~~~~~~L~-~~~~~~~g~~~~~p~gg~f~~~~~~~~~d~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~  392 (420)
T d1vp4a_         314 LYRRKRTVMLNALE-EYFSDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFC  392 (420)
T ss_dssp             HHHHHHHHHHHHHH-HHSTTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECS
T ss_pred             Hhhhhcccchhhhh-hhhccCCCcEEecCCceEEEEEECCCCCCHHHHHHHHHHCCeEEEechhhCCCCCCCCEEEEEeC
Confidence            88888888888777 54211 125778899999999855    3333334445679999886          1  99998


Q ss_pred             CCCcccHHHHHHHHHHHhhhc
Q 015283          389 GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       389 ~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..+++++++++++|++++++.
T Consensus       393 ~~~~e~l~~a~~rL~~~l~~~  413 (420)
T d1vp4a_         393 LPPDEKIVEGIKRLREVVLEY  413 (420)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHh
Confidence            768899999999999998753

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=2.8e-40  Score=309.46  Aligned_cols=340  Identities=14%  Similarity=0.132  Sum_probs=254.4

Q ss_pred             CCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCC
Q 015283           14 TMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA   93 (410)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~   93 (410)
                      +..++.++.+.++++...+ .++|||+.|.+    ..++ |+.+++++.+....  ...| |..+..+||+++++++.  
T Consensus         3 ~~~hgg~~~~~~~~~g~~p-~~~idls~~~n----p~~~-p~~~~~a~~~~~~~--~~~Y-p~~~~~~Lr~aia~~~~--   71 (355)
T d1lc5a_           3 NTAHGGNIREPATVLGISP-DQLLDFSANIN----PLGM-PVSVKRALIDNLDC--IERY-PDADYFHLHQALARHHQ--   71 (355)
T ss_dssp             CCSSSCCCHHHHHHHTSCG-GGSEECSSCCC----TTCC-CHHHHHHHHHTGGG--GGSC-CCTTCHHHHHHHHHHHT--
T ss_pred             cCCCCCHHHHHHHHhCCCh-hheEEccCCCC----CCCC-CHHHHHHHHHHHHH--hccC-CCCChHHHHHHHHHHhC--
Confidence            3456777888887776543 36999999976    3332 78899999887654  3668 55677899999999973  


Q ss_pred             CCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHH
Q 015283           94 DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD  173 (410)
Q Consensus        94 ~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~  173 (410)
                          +++++|++  ++|+++++..+   +..+ .|+.+++..|+|..|.......+++++.+++..++++.++ +.+++.
T Consensus        72 ----v~~~~I~~--~~g~~~~~~~~---~~~~-~~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~  140 (355)
T d1lc5a_          72 ----VPASWILA--GNGETESIFTV---ASGL-KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEA  140 (355)
T ss_dssp             ----SCGGGEEE--ESSHHHHHHHH---HHHH-CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHH
T ss_pred             ----CCHHHEEe--cccHHHHHHHH---Hhhh-ccccccccCCccceeccccccccccceeeeeeccCCccce-eeeeec
Confidence                34789988  88888877765   2223 5677778889999999888889999999998766667666 455555


Q ss_pred             HhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283          174 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY  253 (410)
Q Consensus       174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  253 (410)
                      +..   ++++++++|||||||.+++.+++++|+++|++|++++|+||+|.+|.+.+..  .   .......+++++++|+
T Consensus       141 ~~~---~~~~v~l~nP~NPtG~~~~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~--~---~~~~~~~~~~i~~~S~  212 (355)
T d1lc5a_         141 LTP---DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETG--F---IPALKDNPHIWVLRSL  212 (355)
T ss_dssp             CCT---TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCC--S---GGGCTTCTTEEEEEES
T ss_pred             ccc---ccceeeeecccCcccccchhhhhhhhhhhccccccccccccceeeeeeeccc--c---cccccccccceeeccc
Confidence            543   6777777999999999999999999999999999999999999988764211  1   1223455699999999


Q ss_pred             cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015283          254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK  333 (410)
Q Consensus       254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (410)
                      ||.+|++|+|+||+  +++++.+.+.+    +...  .....+.+++.++...+++.++       +.+.++.+++++++
T Consensus       213 SK~~~l~GlR~G~~--i~~~~~~~~~~----~~~~--~~~~~~~~~~~~a~~~l~~~~~-------~~~~~~~~~~~~~~  277 (355)
T d1lc5a_         213 TKFYAIPGLRLGYL--VNSDDAAMARM----RRQQ--MPWSVNALAALAGEVALQDSAW-------QQATWHWLREEGAR  277 (355)
T ss_dssp             TTTTTCTTTCCEEE--ECCCHHHHHHH----HHHS--CTTCSCHHHHHHHHHGGGCHHH-------HHHHHHHHHHHHHH
T ss_pred             ccccccccccccce--eccchhhhHHH----Hhhc--CCccccccccccccccccccch-------hHHHHHHHHHHHHH
Confidence            99999999999997  34444332332    2221  2235667788888888887543       45777888889999


Q ss_pred             HHHHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHH
Q 015283          334 LFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLAD  400 (410)
Q Consensus       334 l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~  400 (410)
                      +.+.|. +++.   +.+ .|.+++|+|+++.   .++++++.+ +||.++|+.          |||++  ++++++++++
T Consensus       278 ~~~~l~-~~~~---~~~-~p~~~~f~~~~~~~~~~~~~~~L~~-~gv~vr~~~~f~~~~~~~iRis~~--~~~e~~~li~  349 (355)
T d1lc5a_         278 FYQALC-QLPL---LTV-YPGRANYLLLRCEREDIDLQRRLLT-QRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLA  349 (355)
T ss_dssp             HHHHHH-TSTT---EEE-CCCSSSEEEEEESCTTCCHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHH
T ss_pred             HHHHHh-hcCC---cEE-CCCCCEEEEEECCCCHHHHHHHHHH-CCcEEEeCccCCCCCCCEEEEEeC--CHHHHHHHHH
Confidence            999998 7752   343 4567888888652   345666665 699998762          99984  6899999999


Q ss_pred             HHHHHh
Q 015283          401 AIIDSY  406 (410)
Q Consensus       401 ~l~~~l  406 (410)
                      +|+++|
T Consensus       350 aL~~il  355 (355)
T d1lc5a_         350 ALRNVL  355 (355)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            999875

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.4e-38  Score=292.41  Aligned_cols=309  Identities=15%  Similarity=0.117  Sum_probs=231.8

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ..++|.|++|++    .+++ |+.+.+++.+.+.... .+|.|..|.++||+++++++... +  +++++|++  |+|++
T Consensus        18 ~~d~~~l~~~en----p~~~-p~~i~~~~~~~~~~~~-~~~yp~~g~~~Lr~aia~~~~~~-~--v~~d~I~i--t~G~~   86 (334)
T d2f8ja1          18 KRDKTYLALNEN----PFPF-PEDLVDEVFRRLNSDA-LRIYYDSPDEELIEKILSYLDTD-F--LSKNNVSV--GNGAD   86 (334)
T ss_dssp             CCCSEECSSCCC----SSCC-CHHHHHHHHHHCCTTG-GGSCCCSSCHHHHHHHHHHHTCS-S--CCGGGEEE--EEHHH
T ss_pred             CCCceEEECCCC----CCCC-CHHHHHHHHHHhhcch-hcCCCCCCcHHHHHHHHHHhccc-C--CCcceEEe--cCcch
Confidence            468999999986    3443 7888888888776654 55558889999999999998654 2  56889999  99999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +++.++      +.+||+|++++|+|..|...++.+|++++.+|+.++. . .+ +    ..   .+++.+++++||+||
T Consensus        87 ~~l~~l------~~~~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~-~-~~-~----~~---~~~~~~l~l~nP~NP  150 (334)
T d2f8ja1          87 EIIYVM------MLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDL-R-IP-E----VN---VGEGDVVFIPNPNNP  150 (334)
T ss_dssp             HHHHHH------HHHSSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTS-C-CC-C----CC---CCTTEEEEEESSCTT
T ss_pred             hHHHHH------hhhccccccccccccccccchhccCCccccccccccc-c-cc-c----cc---cccceEEEecccccc
Confidence            888775      2356999999999999999999999999999984322 1 11 1    11   136677788999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.++++++    .++++++|+||+|.++....  . .    ......+++++++|+||.++++|+|+||++.   
T Consensus       151 tG~~~s~~~l~~~----~~~~~~ii~Dd~~~~~~~~~--~-~----~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~---  216 (334)
T d2f8ja1         151 TGHVFEREEIERI----LKTGAFVALDEAYYEFHGES--Y-V----DFLKKYENLAVIRTFSKAFSLAAQRVGYVVA---  216 (334)
T ss_dssp             TCCCCCHHHHHHH----HTTTCEEEEECTTGGGTCCC--C-G----GGGGTCSSEEEEEESTTTSSCTTTCEEEEEE---
T ss_pred             cceeecHHHhhcc----ccceeEEeecccchhhcccc--c-c----cccccCceEEEEecCccccchhhhhhhhccc---
Confidence            9999998887664    56899999999998766431  1 1    1123457999999999999999999999865   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      ++++++++..    ...  ..+.+..++.++...+.+.+       ++++.++.++++++.+.+.|+ ++|    +++.+
T Consensus       217 ~~~~i~~l~~----~~~--~~~~s~~~~~~a~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~  278 (334)
T d2f8ja1         217 SEKFIDAYNR----VRL--PFNVSYVSQMFAKVALDHRE-------IFEERTKFIVEERERMKSALR-EMG----YRITD  278 (334)
T ss_dssp             CHHHHHHHHH----HSC--TTCSCHHHHHHHHHHHHTHH-------HHHHHHHHHHHHHHHHHHHHH-HHT----CEECC
T ss_pred             chHHHHHHHH----hhc--ccccchhhhhhccccccccc-------chhhHHHHHHHHHHHHHHHHH-HCC----CeECC
Confidence            8886665543    222  23466777777777776543       346778889999999999999 988    56777


Q ss_pred             CCcceeeecCCC---H-HHHHHhhhcCcEEEcCCC---eEEecCCCcccHHHHHHHHHH
Q 015283          353 RQIGMFSFTGLN---K-AQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       353 ~~~~~~~~~~~~---~-~~~~~ll~~~gi~v~~~g---Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      ++++ |+|+.+.   . ++++.|+ ++||.+.+..   |||++  +.+++++++++|++
T Consensus       279 ~~g~-f~~~~~~~~~~~~~~~~L~-~~GI~vr~~~~~vRis~g--~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         279 SRGN-FVFVFMEKEEKERLLEHLR-TKNVAVRSFREGVRITIG--KREENDMILRELEV  333 (334)
T ss_dssp             CCSS-EEEEECCHHHHHHHHHHHH-HTTEECEEETTEEEEECC--CHHHHHHHHHHHHH
T ss_pred             CCce-EEEEECCCCCHHHHHHHHH-HCCCEECCCCCeEEEEcC--CHHHHHHHHHHHhc
Confidence            7655 6776552   2 3355555 4699987643   99985  57788999988875

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-36  Score=283.61  Aligned_cols=313  Identities=16%  Similarity=0.189  Sum_probs=230.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      .+.|.|..|++  ..+.   ++.+.       . ...++| |..+..+||+++++++.      +++++|++  |+|+++
T Consensus        27 ~~~i~L~~ne~--p~~~---~~~~~-------~-~~l~rY-Pd~~~~~Lr~~ia~~~g------v~pe~I~i--t~Gs~e   84 (354)
T d1fg7a_          27 NGDVWLNANEY--PTAV---EFQLT-------Q-QTLNRY-PECQPKAVIENYAQYAG------VKPEQVLV--SRGADE   84 (354)
T ss_dssp             TCSEECSSCCC--SSCC---CCCCC-------C-CCTTSC-CCSSCHHHHHHHHHHHT------SCGGGEEE--ESHHHH
T ss_pred             CCCEEeeCCCC--CCCC---CHHHH-------H-HHHhcC-CCCcHHHHHHHHHHHhC------CChHHeee--ccCchH
Confidence            45688888875  1221   22221       1 223678 56677899999999962      34899999  999999


Q ss_pred             HHHHHHHHHHHhCCCC-EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          114 SLRLAAALIERYFPGA-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      ++.++.  ...+.||| .|+++.|+|..|...++..|.+++.++.  .+++.+|++.++..+.    +++++++++||||
T Consensus        85 ai~~~~--~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~--~~~~~~d~~~l~~~~~----~~~~v~~~~pnNP  156 (354)
T d1fg7a_          85 GIELLI--RAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPT--LDNWQLDLQGISDKLD----GVKVVYVCSPNNP  156 (354)
T ss_dssp             HHHHHH--HHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCC--CTTSCCCHHHHHTSCT----TEEEEEEESSCTT
T ss_pred             HHHHHH--HHhhccccccccccccccccchhhhhccCceeecccc--ccccccchhhhhhccc----ccceeeccCCCcc
Confidence            999984  33467998 5888999999999999999999988887  5678899999877653    5778888999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      ||.+++.++++.+.+.++ ++.++|+||+|.+|....      .........+++++++||||.||++|+|+||+++   
T Consensus       157 tG~~~~~~~~~~~~~~~~-~~~~~iidd~~~~f~~~~------~~~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~---  226 (354)
T d1fg7a_         157 TGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQA------SLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA---  226 (354)
T ss_dssp             TCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGG------CSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEE---
T ss_pred             ceeEeeeccccccccccc-ccccccccccchhhcccc------ccchhhcccccceEEeCCccccCCCccccccccc---
Confidence            999999999999988877 567788899988877431      1112334567999999999999999999999865   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      +++.++.+.+    ... .+ ..+...+.++..++.+...     +......+++.+.++.+.+.+. +++.   +....
T Consensus       227 ~~~~i~~l~~----~~~-~~-~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~r~~l~~~l~-~~~~---~~~~~  291 (354)
T d1fg7a_         227 NEEVINLLMK----VIA-PY-PLSTPVADIAAQALSPQGI-----VAMRERVAQIIAEREYLIAALK-EIPC---VEQVF  291 (354)
T ss_dssp             CHHHHHHHHH----HSC-SS-CSCHHHHHHHHHHTSHHHH-----HHHHHHHHHHHHHHHHHHHHHH-HSTT---EEEEC
T ss_pred             cchhhhhhhh----hcC-cc-chhhHHHHHHHHHHhhhcc-----ccccccchhhhhHHHHHHHHHH-hCCC---cceeC
Confidence            8886666543    222 22 3445555666555554432     2334556677888888989898 7763   33455


Q ss_pred             CCcceeeecCC-C-HHHHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHH
Q 015283          353 RQIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIID  404 (410)
Q Consensus       353 ~~~~~~~~~~~-~-~~~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~  404 (410)
                      +.+++|+|+.+ + .++++.|++ +||.+++++         |||++  +++++++++++|+.
T Consensus       292 p~~~~f~~~~~~~~~~~~~~L~~-~gIlvr~~~~~~~~~~~lRisig--t~ee~~~~l~aLka  351 (354)
T d1fg7a_         292 DSETNYILARFKASSAVFKSLWD-QGIILRDQNKQPSLSGCLRITVG--TREESQRVIDALRA  351 (354)
T ss_dssp             CCSSSEEEEEETTHHHHHHHHHH-TTEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHT
T ss_pred             CCCceEEEEeCCCHHHHHHHHHH-CCcEEecCCCCCCCCCEEEEEeC--CHHHHHHHHHHHhh
Confidence            77889999866 3 344666655 699998753         99984  67889999998873

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=100.00  E-value=2.4e-33  Score=264.98  Aligned_cols=327  Identities=11%  Similarity=0.065  Sum_probs=223.8

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHH-hh-ccC-CCccCcCCcc----cHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENL-ML-ERG-ENKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~-~~~-~~~~y~~~~g----~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      .++|+..|+|      ....|-+++.... +. -.+ +...|....+    .++|+++|+++.....+...+..+|++  
T Consensus        57 ~~~~~~~gdp------~~~~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~Ivv--  128 (425)
T d2hoxa1          57 CSADVASGDG------LFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVF--  128 (425)
T ss_dssp             CCEECCSCCC------GGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEE--
T ss_pred             ceeeCCCCCC------CCCCHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEE--
Confidence            5789999987      3334556654332 22 122 2234543322    279999999985444344344456988  


Q ss_pred             cCChhhHHHHHHHHHHH------hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCc
Q 015283          108 GLSGTGSLRLAAALIER------YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS  181 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~  181 (410)
                      ++|+++++..+...++.      ..|||+|+++.|+|+.|....+..+.+...++        +|.+.+++.++.   ++
T Consensus       129 G~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~~~--------~D~~~~~~~~~~---~~  197 (425)
T d2hoxa1         129 GVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWA--------GNAANYVNVSNP---EQ  197 (425)
T ss_dssp             ESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEE--------EEGGGGTTCSCG---GG
T ss_pred             CCCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCccC--------CCHHHHHhhCCC---Cc
Confidence            99999999988433311      45899999999999999998888776654443        477777766654   78


Q ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC
Q 015283          182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA  261 (410)
Q Consensus       182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  261 (410)
                      .++++||||||||.+..          +..+++.+|.||+|.+..+.+          +....+++|+++||||.||++|
T Consensus       198 ~ii~l~sPnNPtG~l~~----------~v~~~~~~I~DEaY~~~~f~~----------~~~~~~~~Ivl~S~SK~fglaG  257 (425)
T d2hoxa1         198 YIEMVTSPNNPEGLLRH----------AVIKGCKSIYDMVYYWPHYTP----------IKYKADEDILLFTMSKFTGHSG  257 (425)
T ss_dssp             EEEEEESSCTTTCCCCC----------CSSTTCEEEEECTTCSTTTSC----------CCSCBCCSEEEEEHHHHTSCGG
T ss_pred             eEEEEECCCCCCcchhh----------hhhhCCEEEEeccccCccccc----------hhhhcCCeEEEEeCHHhccCcc
Confidence            88899999999998632          234689999999996544321          1234468999999999999999


Q ss_pred             CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh-hHH----HHHHHHHHHHHHHHHHHHHHHH
Q 015283          262 ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA-LFD----EWKAEMEMMAGRIKNVRQKLFD  336 (410)
Q Consensus       262 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~-~~~----~~~~~~~~~~~~~~~~~~~l~~  336 (410)
                      ||+||+  +++++++++++.....    ....+++..+|.++...|++.. ...    ...+.++..++.++++++.+.+
T Consensus       258 lRiGw~--i~~~~~i~~~~~~~~~----~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~  331 (425)
T d2hoxa1         258 SRFGWA--LIKDESVYNNLLNYMT----KNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITA  331 (425)
T ss_dssp             GCCEEE--EECCHHHHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred             hheeeE--EeCCHHHHHHHHHhhc----cCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998  5567776666555433    2345788888888877775421 000    0123456778888999999999


Q ss_pred             HhhhccCCCCC-----------cccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC---------eEEecCCCcc
Q 015283          337 SLSAKDKSGKD-----------WSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG---------RISLAGLSLA  393 (410)
Q Consensus       337 ~l~~~~g~~~~-----------~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g---------Ris~~~~~~~  393 (410)
                      .|. +.+....           +....+..+.|.|+..   +.+++.++++++||.++||.         |||++. +++
T Consensus       332 ~L~-~~~~~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~~~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~~-~~e  409 (425)
T d2hoxa1         332 LLD-QSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQD  409 (425)
T ss_dssp             HHT-TSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHH
T ss_pred             HHH-hcCCceeeccCCccceeeeeeccCCCcceeeeeCCCChHHHHHHHHHhCCEEEEechhcCCCCCEEEEEecC-CHH
Confidence            998 7652000           0011223344566643   23346777888999999872         999987 889


Q ss_pred             cHHHHHHHHHHHhhh
Q 015283          394 KCEYLADAIIDSYHN  408 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~  408 (410)
                      ++++++++|++++++
T Consensus       410 ~ld~~l~rL~~~v~a  424 (425)
T d2hoxa1         410 DFDQLMYYLKDMVKA  424 (425)
T ss_dssp             HHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999999875

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=4.2e-26  Score=213.10  Aligned_cols=319  Identities=12%  Similarity=0.013  Sum_probs=193.9

Q ss_pred             ccHHHHHHHHHhhccCCCccCcC---------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH
Q 015283           53 VLDVVKKAENLMLERGENKEYLP---------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE  123 (410)
Q Consensus        53 ~~~~v~~a~~~~~~~~~~~~y~~---------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~  123 (410)
                      +++++++++.+..+......|..         +.-.+.+++.+|+++.        .+++++  |+|||+|+.++  +.+
T Consensus        14 l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g--------~e~~~~--t~g~t~a~~~~--~~a   81 (364)
T d2e7ja1          14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG--------CDVARV--TNGAREAKFAV--MHS   81 (364)
T ss_dssp             CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT--------SSEEEE--ESSHHHHHHHH--HHH
T ss_pred             CCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHhC--------cCEEEE--ECcHHHHHHHH--HHH
Confidence            46888888876533211111211         1124567888888852        257888  99999999998  445


Q ss_pred             HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC--CCCcEEEEeCCCCCCCCCCCCHHH
Q 015283          124 RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQ  201 (410)
Q Consensus       124 ~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii~~~p~NPtG~~~~~~~  201 (410)
                      .+.+||.|+++.++|.+....++..|++++.+|+.+..++.+|++++++.+++.  ...+.++++++|+||||.+.+   
T Consensus        82 l~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---  158 (364)
T d2e7ja1          82 LAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---  158 (364)
T ss_dssp             HCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---
T ss_pred             HhCCCcEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---
Confidence            578999999999999988888889999999999876667889999999998653  234567778999999999765   


Q ss_pred             HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283          202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK  281 (410)
Q Consensus       202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~  281 (410)
                      +++|+++|++||+++++|++|.....+   .+   ...+    ..+++++|++|.++.+| ++||+++   +++.++.+.
T Consensus       159 l~~I~~ia~~~~i~livD~a~~~g~~~---~~---~~~~----g~D~~~~S~~K~~~~~g-~~g~l~~---~~~~~~~~~  224 (364)
T d2e7ja1         159 VKKIAKVCSEYDVPLLVNGAYAIGRMP---VS---LKEI----GADFIVGSGHKSMAASG-PIGVMGM---KEEWAEIVL  224 (364)
T ss_dssp             HHHHHHHHHTTTCCEEEECTTTBTTBC---CC---HHHH----TCSEEEEEHHHHSSCCS-SCEEEEE---CTTTTTTTT
T ss_pred             chhheeccccccchhhccccchhhhhh---hc---cccc----ccceeeeccccccCCCC-CEEEEEE---CHHHHHHHH
Confidence            667888899999999999997543321   11   1111    24578899999999776 7899755   666443322


Q ss_pred             HHHHhhccC--cc-c-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcce
Q 015283          282 SQLKRLARP--MY-S-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM  357 (410)
Q Consensus       282 ~~~~~~~~~--~~-~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~  357 (410)
                      .........  .+ . ........++...+.      ...+.+++..+.+ ++..++.+.+. ++|... +. ..+....
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~-~~~~~~~~~l~-~~g~~~-~~-~~~~~~~  294 (364)
T d2e7ja1         225 RRSEKYKNKEVELLGCTARGATIITLMASFP------HVRERIKRWDEEV-EKARRFAAEME-KLGIKQ-LG-DNPHNHD  294 (364)
T ss_dssp             CBCSSCTTSBGGGTTCCCCSHHHHHHHHHHH------HHHHHGGGHHHHH-HHHHHHHHHHH-HTTCEE-ES-SSSCCSS
T ss_pred             hhccccCcccccccccccchhHHHHHHHHHH------HHHHHHHHHHHHH-HHHHHHHHHHH-HcCCee-cC-CCCCCcc
Confidence            111100000  00 0 111111111111111      1122223333333 45556777787 776411 00 1111111


Q ss_pred             eeecCC------------CHHHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhhcC
Q 015283          358 FSFTGL------------NKAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHNVS  410 (410)
Q Consensus       358 ~~~~~~------------~~~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~~~  410 (410)
                      ..+...            ........+.+.|+.....|     |++..+.+++++++++++|++++++.+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~ys  364 (364)
T d2e7ja1         295 LMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKYS  364 (364)
T ss_dssp             EEEEECHHHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred             eEEEeccchHHHHHHhhccchHHHHHHHhcCCceecCCCcceEEEeccCCCHHHHHHHHHHHHHHHHHhC
Confidence            122111            11123333444577654433     555444589999999999999998754

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.92  E-value=2.9e-25  Score=207.21  Aligned_cols=318  Identities=13%  Similarity=0.057  Sum_probs=193.8

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .++++.-..     +.+.+++...+++...        +.+..+.+++++..++.+....     .+++++  ++||++|
T Consensus        21 ~i~~~~gl~-----~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~-----~e~~~~--~~~~~~a   80 (366)
T d2aeua1          21 ALYDLSGLS-----GGFLIDEKDKALLNTY--------IGSSYFAEKVNEYGLKHLGGDE-----NDKCVG--FNRTSSA   80 (366)
T ss_dssp             GCEECSSCC-----CCCCCCHHHHHHHTST--------THHHHHHHHHHHHHHHHHTCCT-----TEEEEE--ESSHHHH
T ss_pred             hHhhhccCC-----CCCCccHHHHHHHHHh--------cCchhhHHHHHHHHHHHccCCC-----ccEEEE--eCCHHHH
Confidence            466775322     2333455555544221        2244567889999999876542     467777  8999999


Q ss_pred             HHHHHHHHHHhCCCCEEEE-c-CCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283          115 LRLAAALIERYFPGAKVLI-S-SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP  192 (410)
Q Consensus       115 ~~~~~~~~~~~~~gd~Vl~-~-~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP  192 (410)
                      +..+  +. .+.+||.|++ + .|+|+.+...++..|+++  ++.       -|++++++.+++   +++++++++|+||
T Consensus        81 ~~~~--l~-al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~--v~~-------~d~e~l~~~i~~---~tk~i~~~~p~n~  145 (366)
T d2aeua1          81 ILAT--IL-ALKPKKVIHYLPELPGHPSIERSCKIVNAKY--FES-------DKVGEILNKIDK---DTLVIITGSTMDL  145 (366)
T ss_dssp             HHHH--HH-HHCCSEEEEECSSSSCCTHHHHHHHHTTCEE--EEE-------SCHHHHHTTCCT---TEEEEEECBCTTS
T ss_pred             HHHH--HH-HhCCCCEEEEecCCCcchhHHHHHHhcCCeE--ECC-------CCHHHHHHhcCC---CceEEEEEecCCC
Confidence            9887  33 3567777655 3 589999999999988864  333       178888888875   8889999999998


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283          193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS  272 (410)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~  272 (410)
                      +  +++.+++++|+++|++||+++++||+|....+..... ....     ....+++++|+||.+  +|+|+||+++   
T Consensus       146 ~--~~~~~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~-~~~~-----~~~~di~~~S~sK~~--~g~~~G~i~~---  212 (366)
T d2aeua1         146 K--VIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQ-PPAL-----KLGADLVVTSTDKLM--EGPRGGLLAG---  212 (366)
T ss_dssp             C--BCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTC-CCHH-----HHTCSEEEEETTSSS--SSCSCEEEEE---
T ss_pred             C--cCCHHHHHHHHHHhccCcEEEEEecCccccccccccC-CCHh-----hcCceEEEecccccc--cccceeEEEe---
Confidence            6  4568899999999999999999999987544321111 1111     112458889999976  5899999765   


Q ss_pred             CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283          273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL  352 (410)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~  352 (410)
                      +++++++++....    .+...++...+.++...|+..... ..+++.++.++......+.+..... .... .......
T Consensus       213 ~~~~i~~~~~~~~----~~g~~~~~~~~~a~~~aL~tl~~~-r~~~~~~~~~~i~~~~~~~~~~~~~-~~~~-~~~~~~~  285 (366)
T d2aeua1         213 KKELVDKIYIEGT----KFGLEAQPPLLAGIYRALKNFNLE-RIRKAFERAKNFDLSKIEKLNKELK-AIDD-NINIVYE  285 (366)
T ss_dssp             EHHHHHHHHHHHH----TTTCBCCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHCCCHHHHHHHHHHT-TTCT-TEEEEEE
T ss_pred             cHHHHHHHHHHHh----cccccCCHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHhhhhcccc-cccc-ccCcccc
Confidence            8887777665433    333445555566655555422111 0112222222111122222222222 1110 0012222


Q ss_pred             CCcceeeecCC----------CHHHHHHhhhcCcEEEcCC-----C----eEEecCCCcc--cHHHHHHHHHHHhh
Q 015283          353 RQIGMFSFTGL----------NKAQSDNMTNKWHVYMTKD-----G----RISLAGLSLA--KCEYLADAIIDSYH  407 (410)
Q Consensus       353 ~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~~~-----g----Ris~~~~~~~--~i~~~~~~l~~~l~  407 (410)
                      +..+.|.|.+.          +.+++.+|++++||.+.|+     +    |||++.-+.+  +.+++++.|.+.++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK  361 (366)
T d2aeua1         286 RTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIK  361 (366)
T ss_dssp             ECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHH
T ss_pred             cCccchhccCCCcceeecccCHHHHHHHHHHhCCEEEEECCCCCCCCCEEEEeccccchhhCCHHHHHHHHHHHHH
Confidence            33445555421          2356788999899999885     2    9999763333  34666666655544

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.91  E-value=2.7e-23  Score=193.40  Aligned_cols=328  Identities=15%  Similarity=0.085  Sum_probs=216.5

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-C-----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +..++||++++||....+    |.++++..++++. +     ....+....-+.++++.+++++..        +..++ 
T Consensus        44 ~~~~~~FsSndYLGL~~~----p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~g~--------e~all-  110 (396)
T d2bwna1          44 KQDITVWCGNDYLGMGQH----PVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK--------EAALV-  110 (396)
T ss_dssp             EEEEEECSCSCTTSGGGC----HHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC--------SEEEE-
T ss_pred             CeEEEEEEcccccCcCCC----HHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHhCC--------Cceee-
Confidence            357899999998755444    6666666555532 1     111122233457889999999533        34444 


Q ss_pred             ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-CCCcEEEE
Q 015283          107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILL  185 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~~ii  185 (410)
                       .++|..|+..++..+....+||-|+...-.+......++..+++++.+++       .|+++++++++.. +.+.++++
T Consensus       111 -~~sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~H-------nd~~~l~~l~~~~~~~~~~~iv  182 (396)
T d2bwna1         111 -FSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH-------NDVAHLRELIAADDPAAPKLIA  182 (396)
T ss_dssp             -ESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT-------TCHHHHHHHHHHSCTTSCEEEE
T ss_pred             -eecchHHHHHHHHHHhcccCCCceeehhhhhhccchhhhccccCceEeec-------chHHHhhhHHhhhcccCceeEE
Confidence             58888888877555555678899999999999999999999999888876       2667777766543 34566777


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      +......+|.+.|   +.+|+++|++||.++++||+|+....++.. ... ...+......+++++||||++|..|   |
T Consensus       183 ~egvySmdGd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G-~G~-~~~~~~~~~~di~~gTlsKa~g~~G---g  254 (396)
T d2bwna1         183 FESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRG-AGV-AERDGLMHRIDIFNGTLAKAYGVFG---G  254 (396)
T ss_dssp             EESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTS-CCH-HHHHTCGGGCSEEEEESSSTTCSCC---E
T ss_pred             EEeeccCcccccc---cHhHHHHhhhhcceeeeccceeeeeecccc-ccc-hhhcCCceeeeeeeecccccccccc---c
Confidence            7888888998665   556666799999999999996655544222 111 1122122346789999999998776   7


Q ss_pred             eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH--HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI--VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      ++   +++++.++.++.....+..++. .|+.....+  +..++...+        .++.+.+++.+.+++.+.+. ..|
T Consensus       255 ~v---~~~~~~i~~l~~~~~~~ifSta-lpp~~~aa~~~al~i~~~~~--------~~~~r~~l~~~~~~~~~~l~-~~g  321 (396)
T d2bwna1         255 YI---AASARMVDAVRSYAPGFIFSTS-LPPAIAAGAQASIAFLKTAE--------GQKLRDAQQMHAKVLKMRLK-ALG  321 (396)
T ss_dssp             EE---EECHHHHHHHHHHCHHHHTSBC-CCHHHHHHHHHHHHHHTSHH--------HHHHHHHHHHHHHHHHHHHH-HHT
T ss_pred             cc---chhHHHHHHHHhhcchhhhccc-CcHHHHHHHHHHHHHhhcch--------HHHHHHHHHHHHHHHHHHHH-hcC
Confidence            75   4488877777765555544322 222222122  123333322        24667788888889999998 887


Q ss_pred             CCCCcccccCCccee-eecCCC---HHHHHHhhhcCcEEEcC-------CC----eEEecC-CCcccHHHHHHHHHHHh
Q 015283          344 SGKDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTK-------DG----RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       344 ~~~~~~~~~~~~~~~-~~~~~~---~~~~~~ll~~~gi~v~~-------~g----Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                      .    ......+... ++++..   .++.+++++++||++.+       -|    ||++.. .|++||+++++.|++++
T Consensus       322 ~----~~~~~~spIvpv~ig~~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~iw  396 (396)
T d2bwna1         322 M----PIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW  396 (396)
T ss_dssp             C----CBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred             C----CcCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHhC
Confidence            4    3333333333 455542   23456778777998754       23    888765 59999999999999873

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4.4e-23  Score=194.35  Aligned_cols=324  Identities=14%  Similarity=0.077  Sum_probs=206.4

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCCCccCcCC------------cccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGENKEYLPI------------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~------------~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      +|+|..+..++++.+.+++.+.+...  ..|+.+            .-++++|+.+++++...      +++|++  ++|
T Consensus         4 iYlD~aa~~p~~~~v~ea~~~~~~~~--~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~------~~~I~~--~~~   73 (391)
T d1p3wa_           4 IYLDYSATTPVDPRVAEKMMQFMTMD--GTFGNPASRSHRFGWQAEEAVDIARNQIADLVGAD------PREIVF--TSG   73 (391)
T ss_dssp             EECBTTTCCCCCHHHHHHHHTTTSTT--SCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCC------GGGEEE--ESS
T ss_pred             EEeeCccccCCCHHHHHHHHHHHHhc--cccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCC------CCcEEE--ECC
Confidence            36777788888999999999887532  223211            12457888999997543      789999  999


Q ss_pred             hhhHHHHHHHHHH--HhCCCCEEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283          111 GTGSLRLAAALIE--RYFPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL  185 (410)
Q Consensus       111 gt~a~~~~~~~~~--~~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii  185 (410)
                      +|+++..+...+.  .+.+||+|++.++.|+.+...++   ..|.++..++.  .+++.+|++.+++.+++   ++++++
T Consensus        74 ~t~~l~~~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~~~~~i~~---~T~lv~  148 (391)
T d1p3wa_          74 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAP--QRNGIIDLKELEAAMRD---DTILVS  148 (391)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECC--CTTSCCCHHHHHHHCCT---TEEEEE
T ss_pred             HHHHHHHHHhhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCC--CCCCeEcHHHHHHhCCC---CcEEEE
Confidence            9999988754432  25699999999999998765544   56889999987  34567899999999975   899999


Q ss_pred             eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283          186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      +++++||||..++.   ++|+++|+++|+++++|.+|..... +.+.         ...+.++++.|.+|.+|.+|.  |
T Consensus       149 is~~~n~tG~~~~~---~~I~~~~~~~~~~~ivD~~~~~g~~-~~d~---------~~~~~D~~~~s~~k~~g~~g~--g  213 (391)
T d1p3wa_         149 IMHVNNEIGVVQDI---AAIGEMCRARGIIYHVDATQSVGKL-PIDL---------SQLKVDLMSFSGHKIYGPKGI--G  213 (391)
T ss_dssp             CCSBCTTTCCBCCH---HHHHHHHHHHTCEEEEECTTTBTTB-CCCT---------TTSCCSEEEEESTTTTSCSSC--E
T ss_pred             EECCCCCCeeECCH---HHHHHHhccCCcEEEEeeccccCCc-cccc---------hhccccccccccccccCCCce--E
Confidence            99999999997775   5677779999999999999653331 1211         122356778899999987774  6


Q ss_pred             eEEEEeCCchhHHHHHHHHHh--hccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          266 AMNVVCSSSDLAARVKSQLKR--LARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      ++++   +++...........  .............+.++ ...+.      .+.+......+++++.+..+.+.|. .+
T Consensus       214 ~~~~---~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~l~~~L~-~~  283 (391)
T d1p3wa_         214 ALYV---RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYR------IAKEEMATEMERLRGLRNRLWNGIK-DI  283 (391)
T ss_dssp             EEEE---CBTTBCCCCCSSCSSCTTTTTSCSCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHTTT-TS
T ss_pred             EEEE---ecchhcccCCcccCCccccCcccCcchhhhhhhhhhhhh------HHHHHhhHHHHHHHHHHHHHHHHHH-hh
Confidence            6644   44421111100000  00001112222222222 11111      1123334555677778888888887 66


Q ss_pred             CCCCCcccc----cCCcceeeecCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-C
Q 015283          343 KSGKDWSFI----LRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-L  390 (410)
Q Consensus       343 g~~~~~~~~----~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~  390 (410)
                      +... +...    .+....+.+.+...+.+...++  ++.++.|                         |  |||+.. .
T Consensus       284 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~n  360 (391)
T d1p3wa_         284 EEVY-LNGDLEHGAPNILNVSFNYVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT  360 (391)
T ss_dssp             TTEE-ECSCTTTSCTTEEEEEETTSCHHHHHHHTT--TEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTC
T ss_pred             cCee-ecccccccCceEEEEEeCCCChHHHHHHhC--CCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCC
Confidence            5211 1111    1112223444555555444443  3443321                         2  999764 3


Q ss_pred             CcccHHHHHHHHHHHhhhc
Q 015283          391 SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       391 ~~~~i~~~~~~l~~~l~~~  409 (410)
                      |++|++++++.|+++++++
T Consensus       361 t~edid~l~~~l~~~l~~l  379 (391)
T d1p3wa_         361 TEEEIDYTIELVRKSIGRL  379 (391)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            8899999999999998764

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=3.3e-22  Score=186.85  Aligned_cols=323  Identities=13%  Similarity=0.085  Sum_probs=216.0

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-C-----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV  106 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~  106 (410)
                      +.+++||+...||....    .|.++++..+++.. +     ....+....-+.+|.+.+++++..        +..++ 
T Consensus        37 g~~~l~f~s~dYLGl~~----~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~g~--------e~al~-  103 (383)
T d1bs0a_          37 DRQYLNFSSNDYLGLSH----HPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGY--------SRALL-  103 (383)
T ss_dssp             TEEEEECSCCCTTSGGG----CHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--------SEEEE-
T ss_pred             CeEEEEEEcccccccCC----CHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhcCC--------CceEE-
Confidence            35689999888754333    46677766666532 1     112222334468999999999632        45555 


Q ss_pred             ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEe
Q 015283          107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH  186 (410)
Q Consensus       107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~  186 (410)
                       .++|..++..+  +.....++|.|++....|......++..+.+++.++.       .|.+++++.+.+.++...++++
T Consensus       104 -~~SG~~an~~~--i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~h-------nd~~~le~~l~~~~~~~~~vv~  173 (383)
T d1bs0a_         104 -FISGFAANQAV--IAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVT  173 (383)
T ss_dssp             -ESCHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEE
T ss_pred             -ecccchhhHHH--HHhhcCCCceEEeeccccHHHhhccccCCCcceEecc-------hHHHHHHHHhcccCCCceEEEe
Confidence             68888888887  3444679999999999999998888888888877776       3889999998887677788888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      +.+.+.+|.+.+..   +|.++|++||+++++||+|.....+.   +..+....... ...+.+.|++|.+|.+|   |+
T Consensus       174 e~v~s~~G~i~pl~---~l~~l~~~~~~~livDeah~~gv~G~---~g~G~~~~~~~-~~~~~~~t~~ka~g~~G---g~  243 (383)
T d1bs0a_         174 EGVFSMDGDSAPLA---EIQQVTQQHNGWLMVDDAHGTGVIGE---QGRGSCWLQKV-KPELLVVTFGKGFGVSG---AA  243 (383)
T ss_dssp             ESBCTTTCCBCCHH---HHHHHHHHTTCEEEEECTTTTTTSSG---GGCCHHHHTTC-CCSEEEEESSSTTSSCC---EE
T ss_pred             cCCCCCCCcccchh---HHHHHHHhcCcEEEeecceeeeecCC---cccchHHHcCC-ccccccccccccccccc---cc
Confidence            99999999977655   55566999999999999977666542   22222222222 35566789999998776   77


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      +..   +.+.++.++........++...|+..++.. +..++...        ..+..+++++++..++.+.|. ++|+ 
T Consensus       244 v~~---~~~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~--------~~~~~~~~l~~~~~~~~~~l~-~~g~-  310 (383)
T d1bs0a_         244 VLC---SSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSD--------EGDARREKLAALITRFRAGVQ-DLPF-  310 (383)
T ss_dssp             EEE---CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSH--------HHHHHHHHHHHHHHHHHHHHT-TSSC-
T ss_pred             ccc---chhHHHHHHhhchhhhhcccccchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHHHHHHHH-hcCC-
Confidence            544   778777766554444443222222222111 12222222        235677788889999999998 8873 


Q ss_pred             CCcccccCCccee-eecCCC---HHHHHHhhhcCcEEEcC-------CC----eEEecC-CCcccHHHHHHHHHHH
Q 015283          346 KDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTK-------DG----RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       346 ~~~~~~~~~~~~~-~~~~~~---~~~~~~ll~~~gi~v~~-------~g----Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                         ......+.+. ++++..   .++.++|++ +||++.+       .|    ||++.. +|++||+++++.|+.+
T Consensus       311 ---~~~~~~s~Ii~v~~g~~~~a~~~~~~L~~-~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         311 ---TLADSCSAIQPLIVGDNSRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             ---EECSCCSSBCCEEEESHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             ---ccCCCCCCEEEEEECCHHHHHHHHHHHHH-CCceEEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence               4443333322 444432   234556665 6999853       33    888764 5999999999998764

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3.9e-22  Score=187.34  Aligned_cols=327  Identities=9%  Similarity=0.039  Sum_probs=211.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCcc-----CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKE-----YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ  107 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~-----y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~  107 (410)
                      ...|||++.+||....    +|.+++++.++++. +....     +....-+.++.+.+++++.        .+..++  
T Consensus        45 ~~~l~f~s~dYLGl~~----hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~g--------~e~al~--  110 (401)
T d1fc4a_          45 SHVINFCANNYLGLAN----HPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG--------MEDAIL--  110 (401)
T ss_dssp             CEEEECCCSCTTSCTT----CHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT--------CSEEEE--
T ss_pred             CEEEEEEccccccccC----CHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhhc--------CCceEE--
Confidence            4689999888754333    47777777766633 11010     1123445688999998862        255667  


Q ss_pred             cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHH---HhcCCCCcEEE
Q 015283          108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD---IKAAPGGSFIL  184 (410)
Q Consensus       108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---i~~~~~~~~~i  184 (410)
                      +++|+.|+..++  .....++|.|++....|..+...+...++++..++.       .|.++++++   ++..+...+++
T Consensus       111 ~~SG~~An~~~i--~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~-------~d~~~le~~~~~~~~~~~~~~li  181 (401)
T d1fc4a_         111 YSSCFDANGGLF--ETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLI  181 (401)
T ss_dssp             ESCHHHHHHTTH--HHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEE
T ss_pred             ecchhhhhHHHH--HHhcCCCcEEEeCCcchHHHHccccccCceEEEEcC-------CChHHHHHHHHHhhhcccCceEE
Confidence            799999999873  344679999999999999998888888888777765       255555544   44444566777


Q ss_pred             EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCC
Q 015283          185 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAER  263 (410)
Q Consensus       185 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r  263 (410)
                      ++.+..+..|...   +++++.++|++||+++|+||++..+..+....   +...... ..+.+++++|+||.+|  |..
T Consensus       182 v~egv~s~~G~~~---~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~---G~~~~~~~~~~~dii~~tl~Ka~g--g~~  253 (401)
T d1fc4a_         182 ATDGVFSMDGVIA---NLKGVCDLADKYDALVMVDDSHAVGFVGENGR---GSHEYCDVMGRVDIITGTLGKALG--GAS  253 (401)
T ss_dssp             EEESEETTTTEEC---CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSC---CHHHHTTCTTCCSEEEEESSSTTC--SSS
T ss_pred             EEcCCCCCCCchh---hhhHHHHHHhhcCcEEEehhhhccccccCCCC---ccchhccCCCCCeEEEeecccccc--cCC
Confidence            7667777777644   47777778999999999999988777653211   2222222 3346788999999985  333


Q ss_pred             cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          264 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       264 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .|++   +++.++++.++.....+..+.  ..+.....++...++.       ....++.+++++++..++.+.+. +.+
T Consensus       254 Gg~v---~g~~~~~~~l~~~~~~~~~s~--~l~p~~~~aa~~~l~~-------~~~~~~~~~~l~~~~~~~~~~l~-~~g  320 (401)
T d1fc4a_         254 GGYT---AARKEVVEWLRQRSRPYLFSN--SLAPAIVAASIKVLEM-------VEAGSELRDRLWANARQFREQMS-AAG  320 (401)
T ss_dssp             CEEE---EECHHHHHHHHHHCHHHHHSC--CCCHHHHHHHHHHHHH-------HHTCHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             cccc---cCCHHHHHHHHcCChhhhhcC--CCCHHHHHHHHhhhcc-------cccCHHHHHHHHHHHHHHHhhhc-ccC
Confidence            4674   448887776655444333322  2222222222222211       11124678889999999999998 887


Q ss_pred             CCCCcccccCCccee-eecCCC---HHHHHHhhhcCcEEEcC-------CC----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283          344 SGKDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTK-------DG----RISLAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       344 ~~~~~~~~~~~~~~~-~~~~~~---~~~~~~ll~~~gi~v~~-------~g----Ris~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      .    ......+.+. ++++..   .++.++|++ +||++.+       .|    ||++.. .|++||+++++.|+++.+
T Consensus       321 ~----~~~~~~~pIv~v~~~~~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~  395 (401)
T d1fc4a_         321 F----TLAGADHAIIPVMLGDAVVAQKFARELQK-EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK  395 (401)
T ss_dssp             C----CBCCSSSSEEEEEEECHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             C----ccCCCCCCEEEEEECCHHHHHHHHHHHHH-CCceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence            3    3333333332 344432   245667665 6999753       33    888764 699999999999999988


Q ss_pred             hc
Q 015283          408 NV  409 (410)
Q Consensus       408 ~~  409 (410)
                      ++
T Consensus       396 ~l  397 (401)
T d1fc4a_         396 QL  397 (401)
T ss_dssp             HT
T ss_pred             Hh
Confidence            75

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.88  E-value=9.7e-23  Score=191.35  Aligned_cols=324  Identities=13%  Similarity=0.020  Sum_probs=192.4

Q ss_pred             eeecCCCcccccHHHHHHHHHhhcc----CCCccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLER----GENKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .|+|..+..++|..|.+++.+.+..    +. ..+..    ..-..++|+.+++++...      +++|++  |+|+|++
T Consensus         9 ~yld~~~~~~~p~~v~ea~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~la~~~~~~------~~~i~~--~~g~t~a   79 (381)
T d1elua_           9 TYFNFGGQGILPTVALEAITAMYGYLQENGP-FSIAANQHIQQLIAQLRQALAETFNVD------PNTITI--TDNVTTG   79 (381)
T ss_dssp             EECCTTTCCCCCHHHHHHHHHHHHHHHHHCS-SSHHHHHHHHHHHHHHHHHHHHHTTSC------GGGEEE--ESSHHHH
T ss_pred             EEeeCCcccCCCHHHHHHHHHHHHHhhcCCC-ccchhhHHHHHHHHHHHHHHHHHhCCC------cccEEE--ECChHHH
Confidence            4556666666678888887776532    11 11111    112456788888886433      678999  9999999


Q ss_pred             HHHHHHHHHH-hCCCCEEEEcCCCCcchhh----hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283          115 LRLAAALIER-YFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA  189 (410)
Q Consensus       115 ~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p  189 (410)
                      ++++  +.+. +.+||.|+++++.|++...    +.+..|++++.++..+......+.+.+++.++   +++++++++++
T Consensus        80 ~~~~--~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~---~~t~~v~i~~~  154 (381)
T d1elua_          80 CDIV--LWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG---PKTRLVILSHL  154 (381)
T ss_dssp             HHHH--HHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC---TTEEEEEEESB
T ss_pred             hhhc--chhhhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhc---ccccccccccc
Confidence            9887  3333 4599999999999986554    34457888888886432222122333444443   47888999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHH----cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283          190 HNPTGIDPTPEQWEKIADVIQE----KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG  265 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~----~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  265 (410)
                      +||||.+.+.+++.+   +|++    +++++++|.+++..... .+         ....+.++++.|+.|.++.| .++|
T Consensus       155 ~n~tG~~~~~~~I~~---l~~~~~~~~~~~~~vD~~~~~g~~~-~~---------~~~~~~D~~~~s~~K~~~~p-~G~g  220 (381)
T d1elua_         155 LWNTGQVLPLAEIMA---VCRRHQGNYPVRVLVDGAQSAGSLP-LD---------FSRLEVDYYAFTGHKWFAGP-AGVG  220 (381)
T ss_dssp             CTTTCCBCCHHHHHH---HHHHCCSSSCCEEEEECTTTBTTBC-CC---------TTTSCCSEEEEESSSTTCCC-TTCE
T ss_pred             cccccccchhhHHHH---HHhhccccccccccccccccccccc-cc---------cccccccccccccccccccc-chhh
Confidence            999999888765554   5666    47999999996532211 11         11224678899999998643 4567


Q ss_pred             eEEEEeCCchhHHHHHHHHHh-----------------h-ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          266 AMNVVCSSSDLAARVKSQLKR-----------------L-ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       266 ~l~~~~~~~~~~~~~~~~~~~-----------------~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      ++++   +++..+++......                 . .+.....++.....++...+.....    ....+...++.
T Consensus       221 ~l~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~----~g~~~~~~~~~  293 (381)
T d1elua_         221 GLYI---HGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQR----QGTAEERYQAI  293 (381)
T ss_dssp             EEEE---CTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH----HCCHHHHHHHH
T ss_pred             HHHh---hHHHHHhcCcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHH----hcccccchhhh
Confidence            7755   55533322110000                 0 0001112222222222222211000    00013445677


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccc---cCCcceeeec--C-CCHHHHHHhhhcCcEEEcCC---C--eEEecC-CCcccH
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFI---LRQIGMFSFT--G-LNKAQSDNMTNKWHVYMTKD---G--RISLAG-LSLAKC  395 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~---~~~~~~~~~~--~-~~~~~~~~ll~~~gi~v~~~---g--Ris~~~-~~~~~i  395 (410)
                      .++++++.+.|+ +++.   +.+.   .+.++++.|.  + ...+.+.+.|+++||.+...   +  |||+.. .|++|+
T Consensus       294 ~~~~~~l~~~L~-~~~~---~~~~~~~~~~~~~vsf~~~~~~~~~~i~~~L~~~gi~v~~~~~~~~lRis~~~~nt~edi  369 (381)
T d1elua_         294 CQRSEFLWRGLN-QLPH---VHCLATSAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEEEI  369 (381)
T ss_dssp             HHHHHHHHHHHH-HSTT---EEESCSSCCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHHHH
T ss_pred             hhHHHHHHHHHh-cCCC---eEecCCCCccccEEEEEcCCCCCHHHHHHHHHhCCcEEEecCCCCEEEEecCCCCCHHHH
Confidence            778888889998 7642   2222   3445544332  2 24455555666689987532   2  999763 378999


Q ss_pred             HHHHHHHHHH
Q 015283          396 EYLADAIIDS  405 (410)
Q Consensus       396 ~~~~~~l~~~  405 (410)
                      +++++.|++.
T Consensus       370 d~ll~~l~e~  379 (381)
T d1elua_         370 NHLLARLADF  379 (381)
T ss_dssp             HHHHHHHTTC
T ss_pred             HHHHHHHHhh
Confidence            9999999864

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=5.4e-21  Score=180.54  Aligned_cols=328  Identities=13%  Similarity=0.069  Sum_probs=213.9

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCCCcc----CcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGENKE----YLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~----y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .|+|..+..++|+.+.+++.+.+.......    +..    ..-+++.|+.+++++....     +++|++  +.|+|++
T Consensus        24 iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~-----~~~i~~--~~~~T~~   96 (405)
T d1jf9a_          24 AYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARS-----AEELVF--VRGTTEG   96 (405)
T ss_dssp             EECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSC-----GGGEEE--ESSHHHH
T ss_pred             EEEeCccccCCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCC-----cccccc--cCcHHHH
Confidence            367777777889999999888764322111    110    1235678889999975432     578999  9999999


Q ss_pred             HHHHHHHH--HHhCCCCEEEEcCCCCcchhhhh----hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283          115 LRLAAALI--ERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC  188 (410)
Q Consensus       115 ~~~~~~~~--~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~  188 (410)
                      +..++..+  ..+.+||.|++.+-.|++....+    +..|++++.+|..  .++.+|++.+++++.+   ++++++++.
T Consensus        97 ~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~--~~g~~~~~~~~~~i~~---~t~lv~~~~  171 (405)
T d1jf9a_          97 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPTLFDE---KTRLLAITH  171 (405)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBC--TTSCBCGGGHHHHCCT---TEEEEEEES
T ss_pred             HHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCC--CCCcCCHHHHHHhccC---CcEEEEEec
Confidence            98875432  23569999999999998865544    5679999999883  4567899999988875   899999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      .+|.||.+.|.+   +|+++|+++|+++++|.+++ .+..+.+     +    ...+.++++.|..|.+|++|  +|+++
T Consensus       172 v~~~tG~~~pi~---~i~~~~~~~g~~~~vD~~q~-~g~~~id-----~----~~~~~D~~~~s~hK~~Gp~G--~g~l~  236 (405)
T d1jf9a_         172 VSNVLGTENPLA---EMITLAHQHGAKVLVDGAQA-VMHHPVD-----V----QALDCDFYVFSGHKLYGPTG--IGILY  236 (405)
T ss_dssp             BCTTTCCBCCHH---HHHHHHHHTTCEEEEECTTT-TTTSCCC-----H----HHHTCSEEEEEGGGTTSCSS--CEEEE
T ss_pred             CCCcccccCchH---HhhhHHHHcCCeeeccccee-ccccccc-----h----hhcCCceeeccccccccCCC--ceeee
Confidence            999999966655   56677999999999999954 3321121     1    12236788999999998777  57776


Q ss_pred             EEeCCchhHHHHHHHHHh------------------hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVKSQLKR------------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV  330 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  330 (410)
                      +   +++..+.+......                  ..+...++++..+..++...++   +..  ....+++.++.+..
T Consensus       237 v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~---~~~--~~g~~~i~~~~~~L  308 (405)
T d1jf9a_         237 V---KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALE---YVS--ALGLNNIAEYEQNL  308 (405)
T ss_dssp             E---CHHHHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHH---HHH--HHCHHHHHHHHHHH
T ss_pred             e---chhhhcccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHH---HHH--HhChHHHHHHHHHH
Confidence            5   66632221100000                  0000111233333232322222   110  11245666777777


Q ss_pred             HHHHHHHhhhccCCCCCccccc--CCcceee--ecCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC-
Q 015283          331 RQKLFDSLSAKDKSGKDWSFIL--RQIGMFS--FTGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG-  389 (410)
Q Consensus       331 ~~~l~~~l~~~~g~~~~~~~~~--~~~~~~~--~~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~-  389 (410)
                      .+.+.+.++ .++.   .....  ...+.+.  ..+.+.+.+...++++||.++.|              |  |||+.. 
T Consensus       309 ~~~~~~~l~-~~~~---~~~~~~~~r~~ivsf~~~~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~y  384 (405)
T d1jf9a_         309 MHYALSQLE-SVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY  384 (405)
T ss_dssp             HHHHHHHHT-TSTT---EEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTT
T ss_pred             HHHHHhhhh-cCCc---ccccCCcCcCcEEEEEcCCCCHHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCEEEEECCCC
Confidence            777888887 6653   22222  2233333  33556666666667789998643              2  999775 


Q ss_pred             CCcccHHHHHHHHHHHhhhc
Q 015283          390 LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       390 ~~~~~i~~~~~~l~~~l~~~  409 (410)
                      .|.+|++.+++.|+++++-+
T Consensus       385 nt~eDid~l~~~l~~i~r~~  404 (405)
T d1jf9a_         385 NTHEEVDRLVTGLQRIHRLL  404 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhc
Confidence            38899999999999997643

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=1.6e-22  Score=186.11  Aligned_cols=313  Identities=15%  Similarity=0.043  Sum_probs=191.2

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI  133 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~  133 (410)
                      +|++++|+.++...  +..|.+.+...+|++.+++++ +.       +++++  ++|||+|+.++  +.....+||.+++
T Consensus        13 ~p~v~~A~~~a~~g--~~~yg~~p~~~~le~~lA~~~-G~-------~~~~~--~~sGt~A~~~a--l~a~~~~g~~~~~   78 (343)
T d1m6sa_          13 TEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF-GK-------EAALF--VPSGTMGNQVS--IMAHTQRGDEVIL   78 (343)
T ss_dssp             CHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHT-TC-------SEEEE--ESCHHHHHHHH--HHHHCCTTCEEEE
T ss_pred             CHHHHHHHHhhhcC--CcccCCCHHHHHHHHHHHHHH-CC-------CeEEE--eCCHHHHHHHH--HHHHhccCCceec
Confidence            68999999876533  366888888999999999995 32       45667  79999998887  4445779999999


Q ss_pred             cCCCCcchhhhhhh---CCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283          134 SSPTWGNHKNIFND---ARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPEQWEKIA  206 (410)
Q Consensus       134 ~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~~~p~NPtG~~~~~~~l~~i~  206 (410)
                      ..+.+..+......   .+..+..++.   .....|++.+++.+...    .....+++.+.++|++|.+.+.+++++|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~  155 (343)
T d1m6sa_          79 EADSHIFWYEVGAMAVLSGVMPHPVPG---KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEIC  155 (343)
T ss_dssp             ETTCHHHHSSTTHHHHHTCCEEEEECE---ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHH
T ss_pred             cccccceeeecccccccccceeecccc---ccCccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHHHH
Confidence            99988766544332   2333333333   34457888888887652    12344555677899999999999999999


Q ss_pred             HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHh
Q 015283          207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR  286 (410)
Q Consensus       207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~  286 (410)
                      ++|+++|+++++|++|..+....   ....... ........ +  ++|..+..|.+.|+...   ..+.+.........
T Consensus       156 ~~~~~~g~~~~~D~a~~~~~~~~---~~~~~~~-~~~~~~~~-~--~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~  225 (343)
T d1m6sa_         156 TIAKEHGINVHIDGARIFNASIA---SGVPVKE-YAGYADSV-M--FCLSKGLCAPVGSVVVG---DRDFIERARKARKM  225 (343)
T ss_dssp             HHHHHHTCEEEEEETTHHHHHHH---HCCCHHH-HHHTCSEE-E--EESSSTTCCSSCEEEEE---CHHHHHHHHHHHHH
T ss_pred             HHHHhcCeEEEeccccccccccc---cccchhh-hccccccc-c--ccccccccccccccccc---cHHHHhhhHhhCcc
Confidence            99999999999999976544210   0001101 11112222 2  33333345666677544   66655544433221


Q ss_pred             hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---
Q 015283          287 LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---  363 (410)
Q Consensus       287 ~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---  363 (410)
                      .   ... .+.....++........        .....+...++...+.+.+. +++.   .....+..++++|+.+   
T Consensus       226 ~---~~~-~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~v~~~~~~~  289 (343)
T d1m6sa_         226 L---GGG-MRQAGVLAAAGIIALTK--------MVDRLKEDHENARFLALKLK-EIGY---SVNPEDVKTNMVILRTDNL  289 (343)
T ss_dssp             H---TCC-CSSTHHHHHHHHHHHHH--------SSTTHHHHHHHHHHHHHHHH-HHTC---BCCGGGCCSSEEEEECTTS
T ss_pred             c---ccc-cchhHHHHHhhhhhhhh--------hHHHHHHHHHHHHHhhhHHH-Hhcc---CccCCCCCceEEEEEeCCC
Confidence            1   111 22222222221111000        11222333444445555555 5542   2223334455666533   


Q ss_pred             --CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhcC
Q 015283          364 --NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNVS  410 (410)
Q Consensus       364 --~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~~  410 (410)
                        +. ++.++|++ +||.+.|.+    ||++.. .|+++|+++++.|++++++++
T Consensus       290 ~~~a~~l~~~L~~-~Gi~v~~~~~~~iRi~~~~~~t~edid~~v~~l~~v~~~~~  343 (343)
T d1m6sa_         290 KVNAHGFIEALRN-SGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS  343 (343)
T ss_dssp             SSCHHHHHHHHHH-HTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred             cccHHHHHHHHHH-CCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhC
Confidence              33 45566655 699998765    887653 489999999999999999864

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=1.7e-20  Score=175.56  Aligned_cols=327  Identities=13%  Similarity=0.078  Sum_probs=205.6

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCCCc---cCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGENK---EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      .|+|..+..++|+.|.+++.+.+......   .|.    ...-+++.|+.+++++...      +++|++  ++|+|+++
T Consensus         3 iyld~a~~~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~------~~~i~~--~~~~T~~l   74 (376)
T d1eg5a_           3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVS------PSEIFF--TSCATESI   74 (376)
T ss_dssp             EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSC------GGGEEE--ESCHHHHH
T ss_pred             EEEECcccccCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCC------CCcEEE--ECCHHHHH
Confidence            46778888777999999988877542211   111    0112456788999997543      789999  99999999


Q ss_pred             HHHHHHHH--HhCCCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283          116 RLAAALIE--RYFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH  190 (410)
Q Consensus       116 ~~~~~~~~--~~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~  190 (410)
                      ..+...+.  ...+|+.|++....|+.+...+   +..|++++.+|+  ..++.+|++++++.+++   +++++++++++
T Consensus        75 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~--~~~~~id~~~l~~~i~~---~t~lv~is~v~  149 (376)
T d1eg5a_          75 NWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPV--DSRGVVKLEELEKLVDE---DTFLVSIMAAN  149 (376)
T ss_dssp             HHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCB--CTTSCBCHHHHHHHCCT---TEEEEEEESBC
T ss_pred             HhhhhcccccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcC--CCCCeECHHHHHHhcCC---CceEEEEECCc
Confidence            88754332  3458889999888887765544   566999999998  34678999999999975   89999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283          191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV  270 (410)
Q Consensus       191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~  270 (410)
                      |+||...+.+++.++++. ++.++++++|.+++. +..+.+         ....+.+++++|.+|.+|++|.++.|+   
T Consensus       150 ~~tG~~~~~~~i~~~~~~-~~~~~~~~vD~~q~~-g~~~~d---------~~~~~~D~~~~s~~K~~gp~G~~~l~~---  215 (376)
T d1eg5a_         150 NEVGTIQPVEDVTRIVKK-KNKETLVHVDAVQTI-GKIPFS---------LEKLEVDYASFSAHKFHGPKGVGITYI---  215 (376)
T ss_dssp             TTTCBBCCHHHHHHHHHH-HCTTCEEEEECTTTT-TTSCCC---------CTTTCCSEEEEEGGGGTSCTTCEEEEE---
T ss_pred             cccceeeeehhhhhhhhh-cccCceeEEEeeecc-cccccc---------ccccCccceecccceeecCCCceeEEe---
Confidence            999998887777666332 335899999999543 321111         123346789999999999888755553   


Q ss_pred             eCCchhHHHHHHHHHh--hccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-
Q 015283          271 CSSSDLAARVKSQLKR--LARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK-  346 (410)
Q Consensus       271 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-  346 (410)
                      .++..    +......  ....... ..+......+......      +................++.+.|. ...... 
T Consensus       216 ~~~~~----~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  284 (376)
T d1eg5a_         216 RKGVP----IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI------AVEELSEAAKHMEKLRSKLVSGLM-NLGAHII  284 (376)
T ss_dssp             CTTSC----CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH------HHHTHHHHHHHHHHHHHHHHHHHH-TTTCEEC
T ss_pred             ccCcc----cCCcccCCCCcccccCCcccchhhhhHHHHhhc------cccchhhhhhhhhhhhhhhccccc-ccccccc
Confidence            22221    1110000  0001111 1222222222221110      112223444555556666777776 553200 


Q ss_pred             -CcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC-----------------C----------eEEecCC-CcccHHH
Q 015283          347 -DWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-----------------G----------RISLAGL-SLAKCEY  397 (410)
Q Consensus       347 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~-----------------g----------Ris~~~~-~~~~i~~  397 (410)
                       ...........+.+.+...+.+...++++||.+++|                 |          |||++.. |++|+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~  364 (376)
T d1eg5a_         285 TPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDY  364 (376)
T ss_dssp             SCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHH
T ss_pred             ccccccccceeeeccCCCCHHHHHHHHhhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHH
Confidence             001111111223344667777777777789988653                 1          9997643 8999999


Q ss_pred             HHHHHHHHhh
Q 015283          398 LADAIIDSYH  407 (410)
Q Consensus       398 ~~~~l~~~l~  407 (410)
                      +++.|++++.
T Consensus       365 l~~~L~~iv~  374 (376)
T d1eg5a_         365 FLKKIEEILS  374 (376)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999986

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.85  E-value=2.3e-19  Score=169.44  Aligned_cols=324  Identities=12%  Similarity=0.085  Sum_probs=211.5

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCCCc----cCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGENK----EYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS  114 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a  114 (410)
                      .|+|..+..++|+.+.+++.+.+......    .|..    ..-+++.|+.+++++....     ++.+++  +++++++
T Consensus        24 iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~-----~~~i~~--~~~tt~~   96 (408)
T d1t3ia_          24 VYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARS-----PREIVY--TRNATEA   96 (408)
T ss_dssp             EECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSC-----GGGEEE--ESSHHHH
T ss_pred             EEeeCccccCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCC-----cccEEe--ecchHHH
Confidence            46777777888999999988876432211    1110    1234578888999975442     467888  8899999


Q ss_pred             HHHHHHHH--HHhCCCCEEEEcCCCCcchhhhh----hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283          115 LRLAAALI--ERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC  188 (410)
Q Consensus       115 ~~~~~~~~--~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~  188 (410)
                      +.++...+  ..+.+||+|++.+-.|++....+    +..|.++..+|.  ..+...+.+.+++.+.+   +++++.++.
T Consensus        97 ~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~--~~~~~~~~~~l~~~~~~---~t~lv~i~~  171 (408)
T d1t3ia_          97 INLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL--DEQESFDLEHFKTLLSE---KTKLVTVVH  171 (408)
T ss_dssp             HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB--CTTSSBCHHHHHHHCCT---TEEEEEEES
T ss_pred             HHHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeec--cccccccHHHhhhccCC---CceEEEEec
Confidence            88875432  24569999999999988765444    456888888886  34556788989888765   889999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283          189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      .+|-||...+.   ++|.++|+++|+++++|.+ +..+..+.+.         ...+.++++.|..|.+|++|  +|+++
T Consensus       172 ~~~~tG~~~p~---~~i~~~~~~~g~~~ivDa~-q~~g~~~id~---------~~~~~D~~~~s~hK~~gp~G--~g~l~  236 (408)
T d1t3ia_         172 ISNTLGCVNPA---EEIAQLAHQAGAKVLVDAC-QSAPHYPLDV---------QLIDCDWLVASGHKMCAPTG--IGFLY  236 (408)
T ss_dssp             BCTTTCBBCCH---HHHHHHHHHTTCEEEEECT-TTTTTSCCCH---------HHHTCSEEEEEGGGTTSCTT--CEEEE
T ss_pred             ccccccccCcH---HHHhhhhhccCceeeeccc-eecccccccc---------cccCCceEEeccccccCCCC--ccccc
Confidence            99999997775   4666779999999999999 4444322221         12235788999999888666  57775


Q ss_pred             EEeCCchhHHHHHHHHHhhc---------------------cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVKSQLKRLA---------------------RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI  327 (410)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~  327 (410)
                      +   +++....    .....                     +...++++..+..++...++   +..  .-.+++++++.
T Consensus       237 v---~~~~~~~----~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~---~~~--~~g~~~i~~~~  304 (408)
T d1t3ia_         237 G---KEEILEA----MPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVD---YLT--DLGMENIHNYE  304 (408)
T ss_dssp             E---CHHHHHH----SCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHH---HHH--HHCHHHHHHHH
T ss_pred             c---chhhhhc----CCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHH---HHH--HcCHHHHHHHH
Confidence            5   6663222    11100                     00111223222222222222   111  11246777777


Q ss_pred             HHHHHHHHHHhhhccCCCCCcccc------cCCccee--eecCCCHHHHHHhhhcCcEEEcCC--------------C--
Q 015283          328 KNVRQKLFDSLSAKDKSGKDWSFI------LRQIGMF--SFTGLNKAQSDNMTNKWHVYMTKD--------------G--  383 (410)
Q Consensus       328 ~~~~~~l~~~l~~~~g~~~~~~~~------~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~~--------------g--  383 (410)
                      .++.+++.+.+. +.+.   +...      ....+..  .+.+.+.+.+...|+++||.+..|              |  
T Consensus       305 ~~l~~~l~~~~~-~~~~---~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~v  380 (408)
T d1t3ia_         305 VELTHYLWQGLG-QIPQ---LRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSA  380 (408)
T ss_dssp             HHHHHHHHHHHH-TCTT---EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCE
T ss_pred             HHHHhHHhhhhc-cCcc---ccccCCCccccCcceEEEEEeCCCCHHHHHHHHhhCCcEEecCcccccHHHHhhcCCccE
Confidence            788888888887 6642   2221      1123333  334667766666667789998653              2  


Q ss_pred             eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283          384 RISLAG-LSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       384 Ris~~~-~~~~~i~~~~~~l~~~l~~~  409 (410)
                      |||+.. .|++|++++++.|+++++.+
T Consensus       381 RiS~~~ynt~~did~li~~L~~~~~~f  407 (408)
T d1t3ia_         381 RASLYFYNTKEEIDLFLQSLQATIRFF  407 (408)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            999774 38999999999999998765

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.83  E-value=1.3e-19  Score=166.26  Aligned_cols=328  Identities=14%  Similarity=-0.018  Sum_probs=200.2

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      |+.+||.+..+    +  .++|+|++|+.++...+. ..|.+.....++|+.+++++. .      +..+++  |+|||+
T Consensus         2 ~~~~~f~s~n~----~--g~~P~v~~A~~~a~~~~~-~~~~~~~~~~~l~~~la~~~g-~------~~~v~f--~~sGt~   65 (345)
T d1v72a1           2 PPALGFSSDNI----A--GASPEVAQALVKHSSGQA-GPYGTDELTAQVKRKFCEIFE-R------DVEVFL--VPTGTA   65 (345)
T ss_dssp             CCCCBCSCGGG----C--CCCHHHHHHHHHTTSSCC-CSTTCSHHHHHHHHHHHHHHT-S------CCEEEE--ESCHHH
T ss_pred             CCCcCcCCCCC----C--CCCHHHHHHHHHHhccCc-cccCCCHHHHHHHHHHHHHHC-C------CcEEEE--CCchHH
Confidence            46778886544    2  237999999988765433 667777788899999999973 2      356888  899999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCC----CCcEEEEe
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLH  186 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~----~~~~~ii~  186 (410)
                      |+..+  +...+.+++.+++....+..+....   ...+..+..++  +......+++.++..+....    .....++.
T Consensus        66 An~~a--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  141 (345)
T d1v72a1          66 ANALC--LSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV--DGPAAKLDIVRLRERTREKVGDVHTTQPACVS  141 (345)
T ss_dssp             HHHHH--HHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC--CCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEE
T ss_pred             HHHHH--HHHHHhcCCccccccccceeeechhhHHHhcCccccccc--ccccccccHHHhhhhhcccccccccccceeee
Confidence            99987  3434668888888776655544332   23344444433  24456688999988886521    12334455


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283          187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA  266 (410)
Q Consensus       187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  266 (410)
                      +++.|++|...+.++++++.++|++||++++.|+++.......   +..................+..|..+   ...+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  215 (345)
T d1v72a1         142 ITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVS---LGCSPAEMTWKAGVDALSFGATKNGV---LAAEA  215 (345)
T ss_dssp             EESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHH---HTCCTTTTTGGGTCCEEEECCGGGTC---SSCEE
T ss_pred             eeccccccccccchhhhhHHHHHHhcCceeeecccccceeccc---cccCHHHhhccccccccccCcccccc---ccccc
Confidence            6788999999999999999999999999999999976433210   00000000111112233333333322   11233


Q ss_pred             EEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          267 MNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       267 l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                      .  ...............   ...... ........++...+.+...        .+...+..++..++.+.+. +++. 
T Consensus       216 ~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~aa~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~-~~~g-  280 (345)
T d1v72a1         216 I--VLFNTSLATEMSYRR---KRAGHLSSKMRFLSAQIDAYLTDDLW--------LRNARKANAAAQRLAQGLE-GLGG-  280 (345)
T ss_dssp             E--EESSGGGHHHHHHHH---HHTTCCCSSTHHHHHHHHHHTSTTHH--------HHHHHHHHHHHHHHHHHHT-TCTT-
T ss_pred             c--ccchhhhhhhccccc---cccccccchhhHHhhhhHHHHHHhhh--------hhhccchhhHHHHHHHHHH-hcCC-
Confidence            3  222333222222211   111122 2222222222344443321        3445555566667777787 7652 


Q ss_pred             CCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC--C----eEEecC-CCcccHHHHHHHHHHH
Q 015283          346 KDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD--G----RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~--g----Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                        +....+..++++++.+..+.+++|+++ |+.+.++  +    ||+++. .|+||||++++.|+++
T Consensus       281 --~~~~~p~~~niv~~~~~~~~~~~L~~~-gi~v~~~~~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         281 --VEVLGGTEANILFCRLDSAMIDALLKA-GFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             --EEEESCCCSSEEEEEECHHHHHHHHHT-TCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             --cEeccCCCccEEEEEcCHHHHHHHHHc-CCCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence              455556667788888888888888875 8877543  2    998764 4899999999999875

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.81  E-value=5e-19  Score=161.14  Aligned_cols=317  Identities=13%  Similarity=0.009  Sum_probs=191.2

Q ss_pred             cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283           54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI  133 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~  133 (410)
                      +|++.+|+.+..... ...|.+....+++|+.+++++...      +++|++  |+|||+++..+  +.....+++.+++
T Consensus        13 ~P~v~eAl~~~~~~~-~~~y~~~~~~~~lr~~ia~~~g~~------~~~v~~--tsggtean~~a--~~~~~~~~~~~~~   81 (340)
T d1svva_          13 HPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELLERP------DADVHF--ISGGTQTNLIA--CSLALRPWEAVIA   81 (340)
T ss_dssp             CHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHHTCT------TSEEEE--ESCHHHHHHHH--HHHHCCTTEEEEE
T ss_pred             CHHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHhCCC------cceEEE--cCCHHHHHHHH--HHHHhhhcccccc
Confidence            689999999876544 367877788889999999997543      578999  99999999887  4455779999999


Q ss_pred             cCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 015283          134 SSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ  210 (410)
Q Consensus       134 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~  210 (410)
                      ..+.+..+.......+.....+...... ...+.+........   .......++.+.+.|.+|.+.+.+++..+.+.|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (340)
T d1svva_          82 TQLGHISTHETGAIEATGHKVVTAPCPD-GKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCK  160 (340)
T ss_dssp             ETTSHHHHSSTTHHHHTTCCEEEECCTT-SCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHH
T ss_pred             ccccceeeeecccccccceeeeeccccc-ccccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhcccc
Confidence            9988877655444333333333332222 22333333333222   1122333333445566777888999999999999


Q ss_pred             HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283          211 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP  290 (410)
Q Consensus       211 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~  290 (410)
                      +++.+++.|++|...... .............  ...+...+.+|..+  +.+.++.   ................  ..
T Consensus       161 ~~g~~~~~d~a~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~--~~  230 (340)
T d1svva_         161 EHGLYLFLDGARLASALS-SPVNDLTLADIAR--LTDMFYIGATKAGG--MFGEALI---ILNDALKPNARHLIKQ--RG  230 (340)
T ss_dssp             HHTCEEEEECTTHHHHHT-STTCCCCHHHHHH--HCSEEEEECTTTTC--SSCEEEE---ECSGGGCTTHHHHHHH--TT
T ss_pred             cccceeeeeccceeeeec-ccccccccccccc--cceeeecCCccccc--ccccccc---ccchhhhhhhhhhccc--cc
Confidence            999999999998543221 1111111111111  12344444445443  3333443   2233322222222111  11


Q ss_pred             cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHH
Q 015283          291 MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDN  370 (410)
Q Consensus       291 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (410)
                      ...........++...+.....        ....++...++.++...++ +.|    +++..|..+.+++..++.+...+
T Consensus       231 ~~~~~~~~~~aa~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~-~~g----~~~~~p~~~~~v~~~~~~~~~~~  297 (340)
T d1svva_         231 ALMAKGWLLGIQFEVLMKDNLF--------FELGAHSNKMAAILKAGLE-ACG----IRLAWPSASNQLFPILENTMIAE  297 (340)
T ss_dssp             CCCTTTHHHHHHHHHHTSTTHH--------HHHHHHHHHHHHHHHHHHH-HTT----CCBSSCCSSSEECBEEEHHHHHH
T ss_pred             CccchhhHHHHHHHHHhhhhHH--------HHHHHHHHHHHhhhHHHHh-cCC----CeeecCCCceEEEEeCCHHHHHH
Confidence            1112223233333444444322        3556677778888888898 887    45555666778888777777777


Q ss_pred             hhhc---CcEEEcCCC----eEEecC-CCcccHHHHHHHHHHH
Q 015283          371 MTNK---WHVYMTKDG----RISLAG-LSLAKCEYLADAIIDS  405 (410)
Q Consensus       371 ll~~---~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~  405 (410)
                      ++++   .++.+.+.|    ||+++. .|++|||+++++|+++
T Consensus       298 l~~~~~~~~~~~~~~~~~~vR~s~~~~~t~edid~~l~~l~~l  340 (340)
T d1svva_         298 LNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRL  340 (340)
T ss_dssp             HTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred             HHHhhhhhcccccCCCCcEEEEECCCCCCHHHHHHHHHHHhcC
Confidence            7765   344555555    997653 4999999999999874

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.80  E-value=7.3e-18  Score=160.36  Aligned_cols=305  Identities=13%  Similarity=0.070  Sum_probs=190.9

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV  150 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~  150 (410)
                      ..|.....+.+|.+.+++++..        +..++  +++|+.|+.+++  ...+.+||.|+.... |......+...|+
T Consensus        69 d~Y~~dpt~~~lE~~~a~l~G~--------e~al~--~~SGt~An~~a~--~~l~~~Gd~Vi~~~~-f~~~~~~i~~~g~  135 (456)
T d1c7ga_          69 EAYAGSENFYHLEKTVKELFGF--------KHIVP--THQGRGAENLLS--QLAIKPGQYVAGNMY-FTTTRFHQEKNGA  135 (456)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHCC--------SEEEE--ESSHHHHHHHHH--HHHCCTTEEEEESSC-CHHHHHHHHHTTE
T ss_pred             hhccCCchHHHHHHHHHHHhCC--------CeEEE--CCCHHHHHHHHH--HHhcCCCCeEecCcc-hHHHHHHHHHcCc
Confidence            6698888889999999999633        45777  899999999884  445789999987665 4444445566676


Q ss_pred             Cccceeee--------cCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccc
Q 015283          151 PWSEYRYY--------DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDV  220 (410)
Q Consensus       151 ~~~~v~~~--------~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~De  220 (410)
                      ..+.+...        ....+.+|++.+++.+++.. ....++++.+++|+. |++++.+++++|.++|++||+.+++|+
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~  215 (456)
T d1c7ga_         136 TFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDA  215 (456)
T ss_dssp             EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred             eeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHHHHHHHHHHHcCCEEEEEc
Confidence            65443321        12346789999999997643 345567778898886 688899999999999999999999999


Q ss_pred             cCCCC----------CCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283          221 AYQGF----------ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP  290 (410)
Q Consensus       221 ay~~~----------~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~  290 (410)
                      ++...          .+.  +.+...+...... ...++..|++|.++.++  .|++  .+++++++++++.........
T Consensus       216 a~~~~~a~~~~~~~~~~~--~~~i~~i~~~~~~-~ad~~s~s~~K~~~~~~--GG~i--~~~~~~l~~~~r~~~~~~~g~  288 (456)
T d1c7ga_         216 TRCVENAYFIKEQEAGYE--NVSIKDIVHEMFS-YADGCTMSGKKDCLVNI--GGFL--CMNDEEMFSAAKELVVVYEGM  288 (456)
T ss_dssp             TTHHHHHHHHHHHSTTCT--TSCHHHHHHHHHT-TCSEEEEETTTTTCCSS--CEEE--EESCHHHHHHHHHHHHHHTCC
T ss_pred             chhhcchhhhcccccccC--CCChhhhcccccc-ccccEEEeccccccccc--eeEE--EcCCHHHHHHHHHhccccCCC
Confidence            95321          111  1222221111111 23456679999987543  2554  467777777766544322222


Q ss_pred             -cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-------
Q 015283          291 -MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------  362 (410)
Q Consensus       291 -~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-------  362 (410)
                       ...........+++..+....-        ....++-.++.++|.+.|. +.|.    .+..+.++..++++       
T Consensus       289 ~~~g~~~~~~~~a~a~~l~e~~~--------~~~l~~r~~~~~~L~e~L~-~~g~----~vv~p~g~~~v~vda~~~~~~  355 (456)
T d1c7ga_         289 PSYGGLAGRDMEAMAIGLREAMQ--------YEYIEHRVKQVRYLGDKLR-EAGV----PIVEPTGGHAVFLDARRFCPH  355 (456)
T ss_dssp             TTTTTCCHHHHHHHHHHHHHHTC--------HHHHHHHHHHHHHHHHHHH-HTTC----CBCSSCCSSEEEEEHHHHCTT
T ss_pred             cccchhhHHHHHHHHHHHHHhcC--------HHHHHHHHHHHHHHHHHHH-hccC----CcccCCCCcceeEechhhccC
Confidence             2223333332222222211100        1222233445577888888 8874    44445555544431       


Q ss_pred             C------CHHHHHHhhhcCcEEEcCCC---------------------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          363 L------NKAQSDNMTNKWHVYMTKDG---------------------RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       363 ~------~~~~~~~ll~~~gi~v~~~g---------------------Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                      +      ...++.+++.+.||...+.|                     |++++.  .|++++|.+++.|+++.++
T Consensus       356 i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~~~~T~e~iD~Vae~i~~v~~~  430 (456)
T d1c7ga_         356 LTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCTTSCCHHHHHHHHHHHHHHHTT
T ss_pred             CCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEecCcccCCHHHHHHHHHHHHHHHhh
Confidence            1      12345566666788654311                     888762  4899999999999999764

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.80  E-value=4.8e-18  Score=160.59  Aligned_cols=339  Identities=15%  Similarity=0.086  Sum_probs=192.6

Q ss_pred             CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      +...||+..|.--...|+.  +|++.+++.++++... ....+.    .....+++.+.....   ..+.+.+  +++|+
T Consensus        51 G~~ylD~~~~~~~~~lGh~--hp~i~~ai~~~~~~~~-~~~~~~----~~~~~la~~~~~~~~---~~~~v~f--~~sGs  118 (427)
T d2gsaa_          51 GNRYIDYVGTWGPAICGHA--HPEVIEALKVAMEKGT-SFGAPC----ALENVLAEMVNDAVP---SIEMVRF--VNSGT  118 (427)
T ss_dssp             SCEEEESSGGGTTTTTCBT--CHHHHHHHHHHHTTCS-CCSSCC----HHHHHHHHHHHHHST---TCSEEEE--ESSHH
T ss_pred             CCEEEEechhHHHHhccCC--cHHHHHHHHHHHHhcC-ccccch----hHHHHHHHHHHhhCC---ccccccc--cCCcH
Confidence            3578999877542345654  6999999998886532 222222    233334444332221   1367888  89999


Q ss_pred             hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-CCCc--cceeeec-------CC---CcccChhhHHHHHhcCCC
Q 015283          113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RVPW--SEYRYYD-------PK---TVGLDFEGMIADIKAAPG  179 (410)
Q Consensus       113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~--~~v~~~~-------~~---~~~~d~~~l~~~i~~~~~  179 (410)
                      +|++.+.++.+.+....+|+....+|.+........ |-..  ..+|..+       .+   ....|++.+++.+++.+.
T Consensus       119 eA~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~  198 (427)
T d2gsaa_         119 EACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPG  198 (427)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEECTTCHHHHHHHHTTSTT
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccCcchHHHHHHHHHhCCC
Confidence            999999888877766688998888886653322111 1000  0000000       00   012488999999987666


Q ss_pred             CcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283          180 GSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG  258 (410)
Q Consensus       180 ~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  258 (410)
                      +...+++...+.-.|... +.+-+++|.++|++||+++|.||++.+|..+    ..+....+ +..++++   .++|.+|
T Consensus       199 ~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~g----~~~~~~~~-gi~PDi~---~~gK~lg  270 (427)
T d2gsaa_         199 EIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRIA----YGGVQEKF-GVTPDLT---TLGKIIG  270 (427)
T ss_dssp             TEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTB----TTCHHHHT-TCCCSEE---EECGGGG
T ss_pred             CeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccceec----ccchHHhc-CCCHHHH---hhhhccC
Confidence            666666655555567655 4555999999999999999999999887532    22333222 2334555   5789998


Q ss_pred             ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                       .|..+|.+++   ++++.+.+...-.....+++ +.+.++..++   ...+.++++    .+.+++..+++++.-+.+.
T Consensus       271 -gG~p~~a~~~---~~~i~~~~~~~~~~~~~~T~-~gnpla~AAala~Le~i~~~~l----~~~~~~~g~~l~~~L~~l~  341 (427)
T d2gsaa_         271 -GGLPVGAYGG---KREIMQLVAPAGPMYQAGTL-SGNPLAMTAGIKTLELLRQPGT----YEYLDQITKRLSDGLLAIA  341 (427)
T ss_dssp             -TTSCCEEEEE---CHHHHTTBTTTSSBCCCCTT-TTCHHHHHHHHHHHHHHTSTTH----HHHHHHHHHHHHHHHHHHH
T ss_pred             -CCcceeeeee---hHHHHHHhcccCCCcCCCCC-CCCchhhHHHHHhhHHhhhhhH----HhhhhHHHHHHHHHHHHHH
Confidence             6888888654   77754443221111122222 3334444443   344555433    1222233333333222222


Q ss_pred             HHhhhccCCCCCcccccCCccee--eecC-----------CCH----HHHHHhhhcCcEEEcCCC--eE--EecCCCccc
Q 015283          336 DSLSAKDKSGKDWSFILRQIGMF--SFTG-----------LNK----AQSDNMTNKWHVYMTKDG--RI--SLAGLSLAK  394 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~~~~~~--~~~~-----------~~~----~~~~~ll~~~gi~v~~~g--Ri--s~~~~~~~~  394 (410)
                         + +.+..  .. ....++++  .|..           .+.    .+...+++ +||++.|++  ++  ++. .|+++
T Consensus       342 ---~-~~~~~--~~-v~~~ggm~~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll~-~Gv~l~p~~~~~~~~~l~-~Te~d  412 (427)
T d2gsaa_         342 ---Q-ETGHA--AC-GGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLE-QGIYLAPSQFEAGFTSLA-HTEED  412 (427)
T ss_dssp             ---H-HTTCC--CE-EEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTTSCEECCTT-CCHHH
T ss_pred             ---h-hcCCC--cE-EcccCCeEEEEEeccCCCCHHHhhcccHHHHHHHHHHHHH-CCEEECCCCCcceeCCCC-CCHHH
Confidence               2 33321  11 12223333  1211           022    23345665 699999976  33  333 49999


Q ss_pred             HHHHHHHHHHHhhhc
Q 015283          395 CEYLADAIIDSYHNV  409 (410)
Q Consensus       395 i~~~~~~l~~~l~~~  409 (410)
                      |++++++++++++++
T Consensus       413 Id~~l~al~~al~~L  427 (427)
T d2gsaa_         413 IDATLAAARTVMSAL  427 (427)
T ss_dssp             HHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999999864

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.7e-18  Score=162.40  Aligned_cols=321  Identities=12%  Similarity=0.087  Sum_probs=194.0

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      |+..+++.|++++....-    .+..+  ..-+.+.|+.+++++....     +..|++  +.|||++++.+  +.+.+.
T Consensus        26 GP~~~~~~Vl~am~~~~i----~HRs~~f~~i~~ea~~~l~~llg~~~-----~~~ii~--~gsgT~a~~~~--i~~l~~   92 (388)
T d1h0ca_          26 GPSNLPPRIMAAGGLQMI----GSMSKDMYQIMDEIKEGIQYVFQTRN-----PLTLVI--SGSGHCALEAA--LVNVLE   92 (388)
T ss_dssp             SCCCCCHHHHHHHTCCCC----CTTSHHHHHHHHHHHHHHHHHHTCCC-----SEEEEE--SSCHHHHHHHH--HHHHCC
T ss_pred             CCCCCCHHHHHHhCcCCC----CCCCHHHHHHHHHHHHHHHHHhCCCC-----CcEEEE--cCcHHHHHHHH--HHHhhc
Confidence            555678999988754221    11211  2345788888888875431     234777  89999999998  556678


Q ss_pred             CCCEEEEcCCCCcchhh--hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283          127 PGAKVLISSPTWGNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK  204 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~  204 (410)
                      +|+++++...++.....  .....+..+..++.  ......|.+++++.+..  +++.++.+++.+|.||...+   +++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~n~tG~i~p---i~~  165 (388)
T d1h0ca_          93 PGDSFLVGANGIWGQRAVDIGERIGARVHPMTK--DPGGHYTLQEVEEGLAQ--HKPVLLFLTHGESSTGVLQP---LDG  165 (388)
T ss_dssp             SSCCEEECBSSHHHHHHHHHHHHHC--CBCCBC--CTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTT
T ss_pred             cCCceeeecccceeeeecccccccccccccccc--CCccccchHHHHHHhcc--CCcceEEEeeeeeccccccC---HHH
Confidence            99999999887765543  33456666666655  44556788888777655  24556666788999999554   556


Q ss_pred             HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH-
Q 015283          205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ-  283 (410)
Q Consensus       205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~-  283 (410)
                      |.++|+++|+++++|.+++ ++..+.+.+         ..+.++++.|..|.++.|+ .+|++++   ++..++.+... 
T Consensus       166 i~~~~~~~g~~~~vD~~qs-~g~~~~d~~---------~~~~D~~~~s~~K~~~gp~-g~~~~~~---~~~~~~~~~~~~  231 (388)
T d1h0ca_         166 FGELCHRYKCLLLVDSVAS-LGGTPLYMD---------RQGIDILYSGSQKALNAPP-GTSLISF---SDKAKKKMYSRK  231 (388)
T ss_dssp             HHHHHHTTTCEEEEECTTT-TTTSCCCTT---------TTTCSEEEEESSSTTCCCT-TCEEEEE---CHHHHHHHTTCS
T ss_pred             HHHHhhcccccceeccccc-ccccccccc---------ccccceecccccccccCCC-ceEEEee---cHHHHHhhhhcc
Confidence            7777999999999999944 432212222         2235677778888775443 2455544   65544443210 


Q ss_pred             ------------HHhh-----ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283          284 ------------LKRL-----ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG  345 (410)
Q Consensus       284 ------------~~~~-----~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  345 (410)
                                  ....     ....+. .++.....++...+..  +   ....++...++..++.+++.+.+. ..+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~--~---~~~g~~~~~~~~~~l~~~l~~~~~-~~g~~  305 (388)
T d1h0ca_         232 TKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLAL--I---AEQGLENSWRQHREAAAYLHGRLQ-ALGLQ  305 (388)
T ss_dssp             SCCSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHH--H---HHHCHHHHHHHHHHHHHHHHHHHH-HHTCC
T ss_pred             ccccccccccchhhhhhhhccccccccccccHHHHHHHHHHHHH--H---HHhccccccccccchhHHHHHHHh-hcCcc
Confidence                        0000     001112 2333222222222211  0   012246777777888888888888 77742


Q ss_pred             CCc-ccccCCcce--eeec-CCCH-HHHHHhhhcCcEEEcCCC--------eEE-ec-CCCcccHHHHHHHHHHHhhhc
Q 015283          346 KDW-SFILRQIGM--FSFT-GLNK-AQSDNMTNKWHVYMTKDG--------RIS-LA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       346 ~~~-~~~~~~~~~--~~~~-~~~~-~~~~~ll~~~gi~v~~~g--------Ris-~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ... .......+.  |.+. +.+. ++...+++++||.+..|.        ||| ++ ..+.+++++++++|+++|+++
T Consensus       306 ~~~~~~~~rs~~i~~~~~p~~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l  384 (388)
T d1h0ca_         306 LFVKDPALRLPTVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHC  384 (388)
T ss_dssp             BSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHS
T ss_pred             cccCCHHHcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            111 001111122  2222 4454 456777787899987651        998 54 347899999999999999875

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.78  E-value=1.1e-17  Score=156.06  Aligned_cols=195  Identities=16%  Similarity=0.064  Sum_probs=138.3

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCC
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA  129 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd  129 (410)
                      |.+.++-++++.+.++.+.   |.....+.++++.+++++...        +.++  +++||.|+.++  +.+. +.+||
T Consensus         8 ~~~~~~~~~~~~~~~~~~~---~~~G~~v~~~E~~la~~~g~~--------~ai~--~~sgt~Al~~a--l~al~~~~gd   72 (376)
T d1mdoa_           8 PAMGAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLTGNQ--------YAVA--VSSATAGMHIA--LMALGIGEGD   72 (376)
T ss_dssp             CCCCHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHHCCS--------EEEE--ESCHHHHHHHH--HHHTTCCTTC
T ss_pred             CCCCHHHHHHHHHHHhcCC---CcCCHHHHHHHHHHHHHHCcC--------eEEE--eCCHHHHHHHH--HHHhCCCCCC
Confidence            4445666777777776653   333345789999999997543        4556  78999999998  3333 66999


Q ss_pred             EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283          130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI  209 (410)
Q Consensus       130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~  209 (410)
                      +|++++.+|......+...|.+++.+++. .+++.+|++++++.+++   +++++++   .+..|..   .++.+|.++|
T Consensus        73 eVi~~~~~~~~~~~ai~~~g~~pv~~d~~-~~~~~~d~~~l~~~i~~---~tkaIi~---~h~~G~~---~~~~~i~~i~  142 (376)
T d1mdoa_          73 EVITPSMTWVSTLNMIVLLGANPVMVDVD-RDTLMVTPEHIEAAITP---QTKAIIP---VHYAGAP---ADLDAIYALG  142 (376)
T ss_dssp             EEEEESSSCHHHHHHHHHTTCEEEEECBC-TTTCCBCHHHHHHHCCT---TEEEECC---BCGGGCC---CCHHHHHHHH
T ss_pred             EEEEecccccccccchhccccceeeeccc-ccccCCCHHHHHHhcCC---CCeEEEE---eCCCCCc---cchhHHHHHH
Confidence            99999999999999999999999999883 56788999999999986   6777774   3567874   4667788889


Q ss_pred             HHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH
Q 015283          210 QEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       210 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                      +++|++||+|++++....  ...      ......+...+.++.+|.++. |- .|.+  ++.++++.++++.
T Consensus       143 ~~~~i~vIeD~a~a~g~~--~~~------~~~g~~g~~~~Sf~~~K~l~~-g~-GG~i--~t~~~~l~~~~~~  203 (376)
T d1mdoa_         143 ERYGIPVIEDAAHATGTS--YKG------RHIGARGTAIFSFHAIKNITC-AE-GGIV--VTDNPQFADKLRS  203 (376)
T ss_dssp             HHHTCCBCEECTTCTTCE--ETT------EETTSSSEEEEECCTTSSSCS-SS-CEEE--EESCHHHHHHHHH
T ss_pred             HhcCceEEeccchhccCe--eCC------eecccccCccccCCCcCCCCC-CC-CCEE--EEechhHHHHHHh
Confidence            999999999999544331  100      011222333333444688863 43 3554  6777776665544

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.75  E-value=1.2e-16  Score=153.30  Aligned_cols=310  Identities=12%  Similarity=0.075  Sum_probs=182.8

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-----CCCCEEEEcCCCCcchhhhh
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-----FPGAKVLISSPTWGNHKNIF  145 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-----~~gd~Vl~~~p~y~~~~~~~  145 (410)
                      ..|.+..++.+|++.+++++ +       .+++++  +++|++|+.++++++...     ..+..++...+.+..+....
T Consensus        69 ~~y~~~~~~~~le~~~a~l~-g-------~~~~~~--~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~  138 (465)
T d1ax4a_          69 EAYAGSRNYYDLKDKAKELF-N-------YDYIIP--AHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHV  138 (465)
T ss_dssp             CCSSSCHHHHHHHHHHHHHH-C-------CCEEEE--ESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHH
T ss_pred             hhhccChHHHHHHHHHHHHH-C-------CCEEEE--CCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHH
Confidence            66888888999999999996 2       357888  899999999987666321     12344566666666666666


Q ss_pred             hhCCCCccceee--------ecCCCcccChhhHHHHHhcCCC-CcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCc
Q 015283          146 NDARVPWSEYRY--------YDPKTVGLDFEGMIADIKAAPG-GSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHI  215 (410)
Q Consensus       146 ~~~g~~~~~v~~--------~~~~~~~~d~~~l~~~i~~~~~-~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~  215 (410)
                      ...|..++.+..        .+...+.+|++.+++++++..+ ...++++..++|.. |.+++.+++++|.++|++||++
T Consensus       139 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~  218 (465)
T d1ax4a_         139 ELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIF  218 (465)
T ss_dssp             HHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCC
T ss_pred             HHcCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCE
Confidence            677776554422        1234567899999999976433 34555555566665 4668999999999999999999


Q ss_pred             ccccccCCCCCC--------CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh-HHHHHHHHHh
Q 015283          216 PFFDVAYQGFAS--------GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL-AARVKSQLKR  286 (410)
Q Consensus       216 li~Deay~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~-~~~~~~~~~~  286 (410)
                      +++|+++.....        +........+....... ..++..|.+|.+  .|++.|+++  +.+... ..........
T Consensus       219 l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~k~~--~~~~~g~l~--~~~~~~~~~~~~~~~~~  293 (465)
T d1ax4a_         219 VVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKY-ADALTMSAKKDP--LLNIGGLVA--IRDNEEIFTLARQRCVP  293 (465)
T ss_dssp             EEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGG-CSEEEEETTSTT--CCSSCEEEE--ESSCHHHHHHHHHHHHH
T ss_pred             EEEECcchhhhhcccccccccccccchhhhccccccc-cceeEeecccCc--ccccceeEe--ecchHHHHHhhhccccc
Confidence            999999752110        00001111111111111 234455666654  466678873  333322 2222222221


Q ss_pred             hccC-cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--
Q 015283          287 LARP-MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--  363 (410)
Q Consensus       287 ~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--  363 (410)
                      .... ........+..++...+... .       .+...++..++.+++.+.|+ +.+.    ....+.++++++.+.  
T Consensus       294 ~~~~~~~~~~~~~~~~a~~~~~~e~-~-------~~~~~~~~~~~~~~l~~~L~-~~g~----~~v~~~~~~~~~~~~~~  360 (465)
T d1ax4a_         294 MEGFVTYGGLAGRDMAAMVQGLEEG-T-------EEEYLHYRIGQVKYLGDRLR-EAGI----PIQYPTGGHAVFVDCKK  360 (465)
T ss_dssp             HTCSTTTTTCCHHHHHHHHHHHHHT-T-------CHHHHHHHHHHHHHHHHHHH-HTTC----CBCSSCCSSEEEEESTT
T ss_pred             cccCCCcchhhHHHHHHHhhhhHHh-h-------hHHHHHHHHHHHHHHHHHHH-hhcC----ccccCCCcceeeeehhh
Confidence            1111 12233333333222222111 1       12334445556778888888 7773    445555555544311  


Q ss_pred             -----------CHHHHHHhhhcCcEEEcCC-------------------C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283          364 -----------NKAQSDNMTNKWHVYMTKD-------------------G--RISLAG--LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       364 -----------~~~~~~~ll~~~gi~v~~~-------------------g--Ris~~~--~~~~~i~~~~~~l~~~l~~  408 (410)
                                 ......+++.+.||...+.                   +  |++++.  .|++++|++++.|++++++
T Consensus       361 ~~~~~~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~~  439 (465)
T d1ax4a_         361 LVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK  439 (465)
T ss_dssp             TCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred             hcCCCccccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHHH
Confidence                       1234566677778875431                   1  787642  4899999999999998764

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.75  E-value=7.5e-18  Score=158.79  Aligned_cols=328  Identities=10%  Similarity=0.027  Sum_probs=183.1

Q ss_pred             eeecCCCcccccHHHHHHHHHhhccCCC-ccCcC------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283           43 AYRTEELQPYVLDVVKKAENLMLERGEN-KEYLP------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL  115 (410)
Q Consensus        43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~  115 (410)
                      .|+|..+..++|..+.+++.+.+..... ....+      ..-.++.|+.+++++...      +++|++  +.++|+++
T Consensus        29 iYLd~as~g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~llga~------~~ei~~--~~~~T~~~  100 (404)
T d1qz9a_          29 IYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGAR------DGEVVV--TDTTSINL  100 (404)
T ss_dssp             EECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCC------TTSEEE--CSCHHHHH
T ss_pred             EEcCCcccccCCHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHhCCC------CCcEEE--ecCchHHH
Confidence            3556666677789999998887633210 11100      123457888888886544      788999  99999998


Q ss_pred             HHHHHHH----HHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283          116 RLAAALI----ERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN  191 (410)
Q Consensus       116 ~~~~~~~----~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N  191 (410)
                      ..+....    ....+|+.|++.+-.+.+........+.++..++..  .....+++.+++.+++   +++++++++.+|
T Consensus       101 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~---~T~lV~i~~v~~  175 (404)
T d1qz9a_         101 FKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYT--LRLVDSPEELPQAIDQ---DTAVVMLTHVNY  175 (404)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCE--EEEESSGGGHHHHCST---TEEEEEEESBCT
T ss_pred             HHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeecee--ccccccchhHHHhcCC---CceEEEEecccc
Confidence            8753311    223588999988877766544444444444333331  1234577888888875   899999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283          192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC  271 (410)
Q Consensus       192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~  271 (410)
                      .||...+   +++|+++|+++|+.+++|.++. .+..+.+     +    ...+.++++.|.+|.++.+.-..|+++.  
T Consensus       176 ~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~-~g~~~~~-----~----~~~~~d~~~~s~~K~~~~~~g~~g~~~~--  240 (404)
T d1qz9a_         176 KTGYMHD---MQALTALSHECGALAIWDLAHS-AGAVPVD-----L----HQAGADYAIGCTYKYLNGGPGSQAFVWV--  240 (404)
T ss_dssp             TTCBBCC---HHHHHHHHHHHTCEEEEECTTT-TTTSCCC-----H----HHHTCSEEEECSSSTTCCCTTCCCEEEE--
T ss_pred             cccceec---HHHHhccccccccceeEEeecc-ccccccc-----c----ccccceEEEEechhhcccCCceEEEEEe--
Confidence            9999765   5567777999999999999954 3322121     1    1223456777888876433333466643  


Q ss_pred             CCchhHHHHHHHHHh-------------------hccCcccCCChhHHH---HHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283          272 SSSDLAARVKSQLKR-------------------LARPMYSNPPVHGAR---IVANVVGNPALFDEWKAEMEMMAGRIKN  329 (410)
Q Consensus       272 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~---~a~~~l~~~~~~~~~~~~~~~~~~~~~~  329 (410)
                       ++...+.+......                   ........+...+..   .+...+.+...     +.+++.......
T Consensus       241 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~  314 (404)
T d1qz9a_         241 -SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDM-----ASLRRKSLALTD  314 (404)
T ss_dssp             -CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCH-----HHHHHHHHHHHH
T ss_pred             -chhhhhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhH-----HHHHHHHHHhHH
Confidence             44422211100000                   000001112222211   12233333221     112222222222


Q ss_pred             HHHHHHHHhhhccCCCCCcccccC-----CcceeeecCCCHHHHHHhhhcCcEEEc--CCC--eEEec--CCCcccHHHH
Q 015283          330 VRQKLFDSLSAKDKSGKDWSFILR-----QIGMFSFTGLNKAQSDNMTNKWHVYMT--KDG--RISLA--GLSLAKCEYL  398 (410)
Q Consensus       330 ~~~~l~~~l~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ll~~~gi~v~--~~g--Ris~~--~~~~~~i~~~  398 (410)
                      ....+.+.+....+    +++..|     .++...|...+.+.+.+.|.++||.+.  .+|  |||++  ..|++||+++
T Consensus       315 ~~~~l~~~~~~~~~----~~i~~p~~~~~r~~~vsf~~~~~~~v~~~L~~~gi~~~~r~~~~lRiS~~h~ynt~~did~~  390 (404)
T d1qz9a_         315 LFIELVEQRCAAHE----LTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDA  390 (404)
T ss_dssp             HHHHHHHHHHTTSC----CEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHH
T ss_pred             HHHHHHHhhccCCC----EEEECCCCccceeeEEEEecCCHHHHHHHHHHCCCEEeecCCCeEEEECCCCCCCHHHHHHH
Confidence            22323333330223    333322     234434432344444444456799763  234  99985  2489999999


Q ss_pred             HHHHHHHhhh
Q 015283          399 ADAIIDSYHN  408 (410)
Q Consensus       399 ~~~l~~~l~~  408 (410)
                      ++.|++++++
T Consensus       391 ~~~L~~vl~~  400 (404)
T d1qz9a_         391 VQILGEILDR  400 (404)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999975

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.75  E-value=6.3e-17  Score=149.97  Aligned_cols=322  Identities=13%  Similarity=0.001  Sum_probs=181.2

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCc--eEEEecCChhhHHHHHHHHHHHhC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR--VATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~--i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      |+.++++.|++++.+..- ++...| ...-.++.|+.+++++...      +++  +++  +.|||++++.+  +.....
T Consensus         7 GP~~~~~~V~~A~~~~~~-~~~~~~-~~~~~~~~r~~l~~l~~~~------~~~~~i~~--t~s~T~~~~~~--~~~l~~   74 (361)
T d1m32a_           7 GPLTTSRTVKEAMLFDSC-TWDDDY-NIGVVEQIRQQLTALATAS------EGYTSVLL--QGSGSYAVEAV--LGSALG   74 (361)
T ss_dssp             SSCCCCHHHHHTTCCCCC-TTSHHH-HTTTHHHHHHHHHHHHCSS------SSEEEEEE--ESCHHHHHHHH--HHHSCC
T ss_pred             CCCCCCHHHHHHhhhhcc-CCCcHH-HHHHHHHHHHHHHHHhCCC------CCCEEEEE--CCCHHHHHHHH--HHHhhh
Confidence            455568888887643221 111112 1345679999999997554      344  455  88899999987  444456


Q ss_pred             CCCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283          127 PGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK  204 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~  204 (410)
                      +++.+++....+...  ....+..+.....+..........+.+.......   +++.++.++..+|.||...+   +++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~tG~~~~---i~~  148 (361)
T d1m32a_          75 PQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNAD---PTISHIAMVHSETTTGMLNP---IDE  148 (361)
T ss_dssp             TTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHC---TTCCEEEEESEETTTTEECC---HHH
T ss_pred             hccccceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhc---cCccceEEEeeecccccchh---hhh
Confidence            777777766554332  2233344555544443222212222222233333   36777777888999999554   667


Q ss_pred             HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHH--
Q 015283          205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVK--  281 (410)
Q Consensus       205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~--  281 (410)
                      |.++|+++|+++++|.+++... .+.+.+         ..+.+++++|..|.+ |++|  +|++++   +++..++..  
T Consensus       149 i~~~~~~~g~~~~vDa~qs~G~-~~~d~~---------~~~~D~~~~s~~K~l~gp~G--~g~l~~---~~~~~~~~~~~  213 (361)
T d1m32a_         149 VGALAHRYGKTYIVDAMSSFGG-IPMDIA---------ALHIDYLISSANKCIQGVPG--FAFVIA---REQKLAACKGH  213 (361)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTT-SCCCTT---------TTTCSEEEEESSSTTCCCSS--EEEEEE---EHHHHTTCTTC
T ss_pred             hhhhhcccceeeEeecccccCc-cccccc---------ccccceEEeeecccccCCCC--ceEEEe---chhhhhhhccc
Confidence            7778999999999999955433 222222         234678888999987 5556  577654   444222111  


Q ss_pred             ------------HHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283          282 ------------SQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS  349 (410)
Q Consensus       282 ------------~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~  349 (410)
                                  ............+++.....+....+.....    +.......++.++..+.+.+.+. ..|......
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~  288 (361)
T d1m32a_         214 SRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAK----EGGVAARHQRYQQNQRSLVAGMR-ALGFNTLLD  288 (361)
T ss_dssp             CSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH----HTHHHHHHHHHHHHHHHHHHHHH-HTTCCBSSC
T ss_pred             cccccccchhhhccccccccccCCCCCchhhhHHHHHHHHHHH----hcchhhhHHHHHHHHHHHHHHHh-hcCCcccCC
Confidence                        1111111112234444444443333321100    11134555666777777888887 776421111


Q ss_pred             cccCCcceeee-c----CCCHHHHHHhhhcCcEEEcCCC-------eEEe-cCCCcccHHHHHHHHHHHhhh
Q 015283          350 FILRQIGMFSF-T----GLNKAQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       350 ~~~~~~~~~~~-~----~~~~~~~~~ll~~~gi~v~~~g-------Ris~-~~~~~~~i~~~~~~l~~~l~~  408 (410)
                      ......+...+ .    +.+...+.+.+.+.||.+.+|+       ||+. ...+++|+++++++|+++|-+
T Consensus       289 ~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~Ris~~g~~~~~di~~lv~al~~~L~~  360 (361)
T d1m32a_         289 DELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYW  360 (361)
T ss_dssp             GGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred             hhhcCCcEEEEECCCCCCCCHHHHHHHHHHCCcEEECCCcCCCCEEEEeCCCCCCHHHHHHHHHHHHHHcCC
Confidence            11111122222 1    2344555444555799987653       9984 345899999999999999754

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.74  E-value=4.2e-17  Score=149.82  Aligned_cols=312  Identities=15%  Similarity=0.070  Sum_probs=184.5

Q ss_pred             CCCcccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283           47 EELQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER  124 (410)
Q Consensus        47 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~  124 (410)
                      ..|+.++++.|++++.+..-    .++.+  ..-..+.++.+++.+...      .+-+++  +.|||++.+.+  +.+.
T Consensus         5 ~PGP~~v~~~V~~am~~~~~----~hr~~~f~~i~~~~~~~l~~ll~~~------~~~i~~--~gsgT~a~e~~--~~nl   70 (348)
T d1iuga_           5 TPGPVRLHPKALEALARPQL----HHRTEAAREVFLKARGLLREAFRTE------GEVLIL--TGSGTLAMEAL--VKNL   70 (348)
T ss_dssp             SSSSCCCCHHHHHHHHSCCC----CTTSHHHHHHHHHHHHHHHHHHTCS------SEEEEE--ESCHHHHHHHH--HHHH
T ss_pred             CCCCCCCCHHHHHHhcCCCC----CCCCHHHHHHHHHHHHHHHHHhCCC------CCEEEE--eCchHHHHHHH--HHhc
Confidence            34666678999998765431    22211  123456777777776432      344666  89999999998  5666


Q ss_pred             hCCCCEEEEcCCCCc--chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHH
Q 015283          125 YFPGAKVLISSPTWG--NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQW  202 (410)
Q Consensus       125 ~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l  202 (410)
                      +.+||+|++..-++.  .+...++.+|.++..+..  +.+..++++...    .  .+...+++++..+.||...+.+  
T Consensus        71 ~~~g~~vlv~~~G~f~~~~~~~a~~~~~~~~~~~~--~~g~~~~~~~~~----~--~~~~~v~~~h~eTstG~~~~i~--  140 (348)
T d1iuga_          71 FAPGERVLVPVYGKFSERFYEIALEAGLVVERLDY--PYGDTPRPEDVA----K--EGYAGLLLVHSETSTGALADLP--  140 (348)
T ss_dssp             CCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCTTTSC----C--SSCSEEEEESEETTTTEECCHH--
T ss_pred             ccccccceeecchHHHHHHHHHHHhcCcccccccc--cCCCcccccccc----c--cCCCeeEEEecchhhhhhccHH--
Confidence            889999998876643  235566788877777765  333334443321    1  2444555577788999966655  


Q ss_pred             HHHHHHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHH
Q 015283          203 EKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAAR  279 (410)
Q Consensus       203 ~~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~  279 (410)
                       +|.++|+++  +.++++|.+ +.++..+.+.+.+         ..++++.|..|.+ |+||+  |++++   +++.+++
T Consensus       141 -~i~~~~~~~~~~~l~~vDav-ss~g~~~i~~d~~---------~iD~~~~~sqK~l~gppG~--~~v~~---s~~~le~  204 (348)
T d1iuga_         141 -ALARAFKEKNPEGLVGADMV-TSLLVGEVALEAM---------GVDAAASGSQKGLMCPPGL--GFVAL---SPRALER  204 (348)
T ss_dssp             -HHHHHHHHHCTTCEEEEECT-TTBTTBCCCSGGG---------TCSEEEEESSSTTCCCSCE--EEEEE---CHHHHHT
T ss_pred             -HHHHHHHhhhccceeechhh-hcccccccccccc---------cCCEEEeccccceecCCce--eeeee---chHHHhh
Confidence             555568876  477888999 5555433444433         2457777888988 88885  77655   7766554


Q ss_pred             H---------HHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283          280 V---------KSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS  349 (410)
Q Consensus       280 ~---------~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~  349 (410)
                      +         ...+.......+. +|+.....++...|+.  ..    +...+..++.+..+..+.+.+. +.|+    .
T Consensus       205 ~~~~~~~~dl~~~~~~~~~~~~~~Tp~v~~i~~l~~aL~~--~~----~~~~~~~~~~~~~~~~~~~~~~-~~gl----~  273 (348)
T d1iuga_         205 LKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEE--VL----PRLEEHLALKAWQNALLYGVGE-EGGL----R  273 (348)
T ss_dssp             CCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH--HG----GGHHHHHHHHHHHHHHHHHHHH-HTTC----E
T ss_pred             hcccccccchhhhhhhhccCcccccccchHHHHHHHHHHH--HH----HHHhHHHHHHHHHHHHHhhhhh-hhhh----c
Confidence            2         2222222222223 4544444444444431  11    1112222333333444555555 5553    2


Q ss_pred             cccC----Ccceeeec-CCCHHHHHHhhhcCcEEEcCCC--------eEE-ecCCCcccHHHHHHHHHHHhhhc
Q 015283          350 FILR----QIGMFSFT-GLNKAQSDNMTNKWHVYMTKDG--------RIS-LAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       350 ~~~~----~~~~~~~~-~~~~~~~~~ll~~~gi~v~~~g--------Ris-~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..+.    .-.-+... +++.+.+.+.++++|+.+.+|.        ||+ ++..+.++++.+++.|+++++++
T Consensus       274 ~~~~~~s~~v~~~~~P~g~~~~~~~~~l~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l~~~  347 (348)
T d1iuga_         274 PVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  347 (348)
T ss_dssp             ESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             cChhhcCCeEEEEECCCCCCHHHHHHHHHHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            2211    11112222 4566666666677899998872        887 43468999999999999999875

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.73  E-value=4.2e-17  Score=155.08  Aligned_cols=274  Identities=13%  Similarity=0.016  Sum_probs=161.3

Q ss_pred             cCChh-hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee-ecCCCcccChhhHHHHHhcC--CCCcEE
Q 015283          108 GLSGT-GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY-YDPKTVGLDFEGMIADIKAA--PGGSFI  183 (410)
Q Consensus       108 t~ggt-~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~--~~~~~~  183 (410)
                      +.+|+ +++.++....+...+++.|+++.-.++.+...+..+|.+++.++. .+.+.+.+|+++|++.+.+.  ...+.+
T Consensus       135 ~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~  214 (434)
T d2z67a1         135 TPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPC  214 (434)
T ss_dssp             ESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEE
T ss_pred             cCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCccCCCHHHHHHHHHhhhhcCCceE
Confidence            34444 444444323333448899999999999999999999998888764 33556789999999999752  235667


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER  263 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  263 (410)
                      ++..+|++++|.   .+++++|+++|++||+++++|++|......     .............++++.|.+|.++.| ..
T Consensus       215 v~~~~~~~~~g~---~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~-----~~~~~~~~~~~~~D~~~~s~hK~l~~~-~g  285 (434)
T d2z67a1         215 VLSTLTFFPPRN---SDDIVEIAKICENYDIPHIINGAYAIQNNY-----YLEKLKKAFKYRVDAVVSSSDKNLLTP-IG  285 (434)
T ss_dssp             EEEESSCCTTBC---CCCHHHHHHHHHHHTCCEEEECTTTTTCHH-----HHHHHHHHHTSCCSEEEEEHHHHHCCC-SS
T ss_pred             EEeccCcCCCcc---ccCHHHHHHHHHHhCCeEEEeccchhhhhh-----ccccccccccCCcceEEEcCccccccC-CC
Confidence            777889999999   455778888899999999999998654310     011112223344677888999988743 33


Q ss_pred             cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          264 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       264 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .|++  ..++++.+++    ............+.....++...+.        .+.+++..++..++.+++.+.|+ ++.
T Consensus       286 ~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~l~~~~--------~~g~~~~~~~~~~~a~~l~~~L~-~l~  350 (434)
T d2z67a1         286 GGLV--YSTDAEFIKE----ISLSYPGRASATPVVNTLVSLLSMG--------SKNYLELVKNQKNSKKLLDELLN-DLS  350 (434)
T ss_dssp             CEEE--EESCHHHHHH----HHTTSCSCBCSHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred             cccc--ccCcHHHHHH----HHhhcccccccchHHHHHHHHHHHH--------HhcchhHHHHHHHHHHHHHHHHH-Hhh
Confidence            3444  4566664443    3322211122222222222222222        12234455555566666666665 431


Q ss_pred             CCCCcccccC--CcceeeecCCCHHHHHHhhhcCcEEEcC----C--------C-------eEEecC-CCcccHHHHHHH
Q 015283          344 SGKDWSFILR--QIGMFSFTGLNKAQSDNMTNKWHVYMTK----D--------G-------RISLAG-LSLAKCEYLADA  401 (410)
Q Consensus       344 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~gi~v~~----~--------g-------Ris~~~-~~~~~i~~~~~~  401 (410)
                      ..........  ...++...+.++..+...+.+.||....    .        +       |++.+. .|++|||+++++
T Consensus       351 ~~~g~~ll~~~~~~~~~~~~~~~~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~~~s~~~T~edID~~i~~  430 (434)
T d2z67a1         351 KKTGGKFLDVESPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSK  430 (434)
T ss_dssp             HHSSCCBCCCCCSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHH
T ss_pred             hhcCceecCCCCCceeeeecCCCHHHHHHHHHHcCCeeeehhhhccccCeeeecccCCCeEEEecCCCCCHHHHHHHHHH
Confidence            0000122221  1222233455655544444556885422    1        0       555432 489999999999


Q ss_pred             HHHH
Q 015283          402 IIDS  405 (410)
Q Consensus       402 l~~~  405 (410)
                      |+++
T Consensus       431 L~kI  434 (434)
T d2z67a1         431 LEKI  434 (434)
T ss_dssp             HHTC
T ss_pred             HhcC
Confidence            9864

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.72  E-value=4e-16  Score=141.42  Aligned_cols=326  Identities=17%  Similarity=0.210  Sum_probs=203.5

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC---Cccc---HHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP---IEGL---AAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .-|+|-..++       .+++.+++++...+.+....+|+.   -.|.   +++.+...+...+.++.     +-+-++.
T Consensus        24 ~~l~LiaSEN-------~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a-----~~anVqp   91 (405)
T d1kl1a_          24 AKIELIASEN-------FVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA-----EHANVQP   91 (405)
T ss_dssp             HSEECCTTCC-------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHCC-----SEEECCC
T ss_pred             cCceEeccCC-------cCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhCC-----Ccceeec
Confidence            4578876654       237999999877664433333432   1122   23322222222222221     2233446


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh---hC--CCCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN---DA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~---~~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      .+|+.|+..+  +.+.+.|||+|+..++..+++...-.   ..  ..+.+.+++ +.+++.+|++++++.+++.  ++++
T Consensus        92 ~SGs~An~av--~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~-d~~~~~ID~d~l~~~a~~~--kPkl  166 (405)
T d1kl1a_          92 HSGAQANMAV--YFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGV-DPETHVIDYDDVREKARLH--RPKL  166 (405)
T ss_dssp             SSHHHHHHHH--HHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECB-CTTTCSBCHHHHHHHHHHH--CCSE
T ss_pred             cCchHHHHHH--HHHhcCCCCEEEEeecccccccccCccccccceEEEEEEecc-chhcccccHHHHHHHHHhh--Ccce
Confidence            8888888887  56668899999999987777654322   11  234455555 3567889999999998874  5566


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      +++..-.+|-     .-+++++.++|++.|.+++.|-++. ++..++..+.+  +    +  ..+++..|..|+|  +|-
T Consensus       167 Ii~G~S~y~r-----~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P--~----~--~aDvvt~tThKtl--rGP  231 (405)
T d1kl1a_         167 IVAAASAYPR-----IIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP--V----P--YAHFVTTTTHKTL--RGP  231 (405)
T ss_dssp             EEECCSSCCS-----CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS--T----T--TCSEEEEESSSTT--CCC
T ss_pred             EEeccccccc-----ccChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCCh--h----h--hhhheeccccccc--cCC
Confidence            6655544444     2257788888999999999999964 23322211111  1    1  2456688999997  578


Q ss_pred             CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283          263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD  342 (410)
Q Consensus       263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  342 (410)
                      |-|.+..   +++.    .+.+....++...+.+.....++...    .+.+.+....+.+.++..++.+.|.+.|. +.
T Consensus       232 rgg~I~~---~~~~----~~~i~~avfPg~qggp~~~~iAa~Av----al~Ea~~~~fk~Ya~qvv~NAkaLa~~L~-~~  299 (405)
T d1kl1a_         232 RGGMILC---QEQF----AKQIDKAIFPGIQGGPLMHVIAAKAV----AFGEALQDDFKAYAKRVVDNAKRLASALQ-NE  299 (405)
T ss_dssp             SCEEEEE---CHHH----HHHHHHHHTTTTCSSCCHHHHHHHHH----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             CCceEEe---cchh----HHHHHhhhCcccccCcchhHHHHHHH----HHHHHhChHHHHHHHHHHHHHHHHHHHHh-cC
Confidence            8787633   6664    44455555554443333333333222    22222344567888999999999999999 88


Q ss_pred             CCCCCcccccCC-cceeeecC-----CCHHHHHHhhhcCcEEEc----CC---------C-eEEec-----CCCcccHHH
Q 015283          343 KSGKDWSFILRQ-IGMFSFTG-----LNKAQSDNMTNKWHVYMT----KD---------G-RISLA-----GLSLAKCEY  397 (410)
Q Consensus       343 g~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~ll~~~gi~v~----~~---------g-Ris~~-----~~~~~~i~~  397 (410)
                      |+    .+.... ....++++     ++...++++|++.||.+.    |+         | ||..+     ++.++++.+
T Consensus       300 G~----~vv~ggTd~H~vlvdl~~~~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~  375 (405)
T d1kl1a_         300 GF----TLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDE  375 (405)
T ss_dssp             TC----EEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHH
T ss_pred             Cc----eeecCCCccceeeccccccCCcHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHH
Confidence            84    544332 23335553     467778888898999875    22         3 88643     468899999


Q ss_pred             HHHHHHHHhhh
Q 015283          398 LADAIIDSYHN  408 (410)
Q Consensus       398 ~~~~l~~~l~~  408 (410)
                      +.+.|.++++.
T Consensus       376 ia~~I~~~l~~  386 (405)
T d1kl1a_         376 IAAIIGLVLKN  386 (405)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHhc
Confidence            99999999864

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.72  E-value=5.1e-16  Score=144.77  Aligned_cols=202  Identities=17%  Similarity=0.130  Sum_probs=143.2

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCE
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK  130 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~  130 (410)
                      |.....-.+++.+.++.+. .-+....-+.++++.+++++...        +.+.  +++||.|+.+++..+ .+.+||+
T Consensus         9 p~~~~~~~~~~~~~l~~g~-~~~~~g~~v~~fE~~~a~~~g~~--------~~v~--~~SGt~Al~lal~~l-~~~~gde   76 (384)
T d1b9ha_           9 PQYDDAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHHGAA--------HALA--VTNGTHALELALQVM-GVGPGTE   76 (384)
T ss_dssp             SCCCHHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHTTCS--------EEEE--ESCHHHHHHHHHHHT-TCCTTCE
T ss_pred             CCCCHHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHHCcC--------eEEE--eCCHHHHHHHHHHHc-CCCCCCE
Confidence            3345666777778776642 11223345789999999996443        4555  799999999983221 3569999


Q ss_pred             EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 015283          131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ  210 (410)
Q Consensus       131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~  210 (410)
                      |++|+.+|......+...|++++.++. +.+++.+|++.+++.+..   ++++++   +.+..|.   ..++.++.++|+
T Consensus        77 Vi~p~~t~~a~~~ai~~~g~~p~~~d~-~~~~~~~d~~~~~~~i~~---~tk~i~---~~~~~g~---~~d~~~i~~~~~  146 (384)
T d1b9ha_          77 VIVPAFTFISSSQAAQRLGAVTVPVDV-DAATYNLDPEAVAAAVTP---RTKVIM---PVHMAGL---MADMDALAKISA  146 (384)
T ss_dssp             EEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCCBCHHHHHHHCCT---TEEEEC---CBCGGGC---CCCHHHHHHHHH
T ss_pred             EEEeccccccccccccccccccccccc-cccccccchhhhcccccc---cccccc---ccccccc---ccccccchhhhh
Confidence            999999999999999999999999987 356788999999998875   777776   4577777   456778888899


Q ss_pred             HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283          211 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK  285 (410)
Q Consensus       211 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~  285 (410)
                      ++++++|+|.+++....  ....     .....++-.++..+.+|.++ .|. .|.+  ++.+++..++++....
T Consensus       147 ~~~i~lieD~a~a~ga~--~~g~-----~~g~~g~~~~~Sf~~~K~i~-~g~-GG~i--~t~~~~~~~~~~~~~~  210 (384)
T d1b9ha_         147 DTGVPLLQDAAHAHGAR--WQGK-----RVGELDSIATFSFQNGKLMT-AGE-GGAV--VFPDGETEKYETAFLR  210 (384)
T ss_dssp             HHTCCBCEECTTCTTCE--ETTE-----EGGGSSSCEEEECCTTSSSC-SSS-CEEE--EECTTCHHHHHHHHHH
T ss_pred             hhhhhhhhhhceecccc--cCCE-----ecCcccccceeccccccccc-ccc-cchh--hhhhHHHHHHHHHHHh
Confidence            99999999999654332  1111     11223445555566689886 343 3555  6778887777666543

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=1.7e-16  Score=148.30  Aligned_cols=325  Identities=12%  Similarity=0.012  Sum_probs=186.5

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHH-HHh
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALI-ERY  125 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~-~~~  125 (410)
                      |+.+++++|++++....    ..++.+  ..-..+.++.+.+.+....  ..+.+.|++  |+|||+++++++.-+ ..+
T Consensus        10 GP~~v~~~V~~Am~~~~----~~hr~~~f~~~~~~~~~~~r~~~~~~~--~~~~~~i~~--t~sgT~a~~~~~~~l~~~~   81 (382)
T d2bkwa1          10 GPIILSGAVQKALDVPS----LGHTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVL--AGSGTLGWDIFASNFILSK   81 (382)
T ss_dssp             SSCCCCHHHHHTTSCCC----CCTTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEE--ESCTTHHHHHHHHHHSCTT
T ss_pred             CCCCCCHHHHHHhCccc----CCCCcHHHHHHHHHHHHHHHHHHhhhc--CCCCeEEEE--eCcHHHHHHHHHHHHHHhc
Confidence            66667899988764321    122322  1223455666666643321  123456888  999999999983222 123


Q ss_pred             CCCCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283          126 FPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE  203 (410)
Q Consensus       126 ~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~  203 (410)
                      .+||+|++..-.+...  ...++..|.....+.. .+.+...+.+.+++.+..  +++.++++++.+|.||...+.+++.
T Consensus        82 ~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~tg~~~~~~~~~  158 (382)
T d2bkwa1          82 APNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRP-LKIGESVPLELITEKLSQ--NSYGAVTVTHVDTSTAVLSDLKAIS  158 (382)
T ss_dssp             CSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECC-SSTTSCCCHHHHHHHHHH--SCCSEEEEESEETTTTEECCHHHHH
T ss_pred             CCCCceEEEEechhhhhhhhhccccccccccccc-cCCCCccchhHHHHHhhh--ccchheeeeeccccccccccchhhh
Confidence            5899999988766553  3344566766655543 234455778888887765  3455666677899999977766554


Q ss_pred             HHHHHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHH
Q 015283          204 KIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       204 ~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      +   .|+++  ++++++|.+ +.++..+.+.+.         .+.++++.|-.|.+ |++|  +|++++   +++..+++
T Consensus       159 ~---~~~~~~~~~~~~vDa~-qs~g~~pid~~~---------~giD~~~~s~~K~l~gP~G--~g~l~v---s~~~~~~~  220 (382)
T d2bkwa1         159 Q---AIKQTSPETFFVVDAV-CSIGCEEFEFDE---------WGVDFALTASQKAIGAPAG--LSISLC---SSRFMDYA  220 (382)
T ss_dssp             H---HHHHHCTTSEEEEECT-TTTTTSCCCTTT---------TTCSEEEEESSSTTCCCSC--EEEEEE---CHHHHHHH
T ss_pred             h---hccccccceeeeeecc-cccccccccccc---------cCeeEEeecccccCcCCCc--hhhhhc---cHHHHhhh
Confidence            4   45554  699999999 555533233222         23578888999988 7777  477766   77766554


Q ss_pred             HHHHHh----------------------hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283          281 KSQLKR----------------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL  338 (410)
Q Consensus       281 ~~~~~~----------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  338 (410)
                      ......                      ..+.+..+++.....++...|+.-     ..+..+..+++.+++++++.+.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~-----~~~g~~~~~~~~~~l~~~l~~~l  295 (382)
T d2bkwa1         221 LNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEI-----LEEGLHKRWDLHREMSDWFKDSL  295 (382)
T ss_dssp             TCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcccCCCcccchhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHH-----HHhhhhhhHHHHHHHHHHHHHHh
Confidence            322111                      111222244443333333333211     12234566667777788888877


Q ss_pred             hhccCCCCCcccccC---CcceeeecCCCHHHHHHhhhcCcEEEcCCC---------eEE-ecCC-CcccHHHHHHHHHH
Q 015283          339 SAKDKSGKDWSFILR---QIGMFSFTGLNKAQSDNMTNKWHVYMTKDG---------RIS-LAGL-SLAKCEYLADAIID  404 (410)
Q Consensus       339 ~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g---------Ris-~~~~-~~~~i~~~~~~l~~  404 (410)
                      . .......+...+.   ..+...+...+.+.+.++|+++||.+..|.         ||+ ++.. ++++++.+++.|..
T Consensus       296 ~-~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~  374 (382)
T d2bkwa1         296 V-NGLQLTSVSRYPSNMSAHGLTAVYVADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDL  374 (382)
T ss_dssp             H-TTTCCEESSCSSSTTBCSSCEEEECSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHH
T ss_pred             h-hcccccccccCchhccCCcEEEEcCCCHHHHHHHHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHH
Confidence            6 4321010111111   112222222356666677778899998762         988 5432 56677777777665


Q ss_pred             Hhhh
Q 015283          405 SYHN  408 (410)
Q Consensus       405 ~l~~  408 (410)
                      +...
T Consensus       375 i~~~  378 (382)
T d2bkwa1         375 IKLA  378 (382)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.71  E-value=1.5e-16  Score=148.15  Aligned_cols=328  Identities=13%  Similarity=0.057  Sum_probs=191.1

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG  113 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~  113 (410)
                      ...||+..|.--...|+.  .|.+.+++.+++.......+. .  ..+.+..+++.+.....  ...+.+.+  +.+|++
T Consensus        37 ~~ylD~~~g~~~~~lGh~--hp~v~~a~~~~~~~~~~~~~~-~--~~~~~~~la~~l~~~~~--~~~~~v~f--~~sGse  107 (387)
T d1vefa1          37 NEYIDCVGGYGVANLGHG--NPEVVEAVKRQAETLMAMPQT-L--PTPMRGEFYRTLTAILP--PELNRVFP--VNSGTE  107 (387)
T ss_dssp             CEEEESSHHHHTCTTCBT--CHHHHHHHHHHHHHCCCCCTT-S--CCHHHHHHHHHHHHTSC--TTEEEEEE--ESSHHH
T ss_pred             CEEEEcchhHHhhhhcCC--cHHHHHHHHHHHHhhcccccc-c--CCchHHHHHHHhhhhcc--ccceeecc--ccCchH
Confidence            567898776543345654  588999988887552211111 1  11344444444332211  11356888  999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283          114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKTVGLDFEGMIADIKAAPGG  180 (410)
Q Consensus       114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~  180 (410)
                      |++.+.++.+.+....+|+....+|.+...... ..|.            .+..+|.       .|++.+++.+.+   .
T Consensus       108 A~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~~~~~---~  177 (387)
T d1vefa1         108 ANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDE---E  177 (387)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCT---T
T ss_pred             HHHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-------CCHHHHHHhcCC---C
Confidence            999999888877766899998888865533222 1221            1112221       377888888764   5


Q ss_pred             cEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283          181 SFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL  259 (410)
Q Consensus       181 ~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  259 (410)
                      ...+++...+...|.. .+.+-++++.++|++||+++|.||++.+|+-.   ...+.... .+..++++   .++|.++ 
T Consensus       178 iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~---G~~~~~~~-~~v~PDi~---~~gK~l~-  249 (387)
T d1vefa1         178 TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRT---GKRFAFEH-FGIVPDIL---TLAKALG-  249 (387)
T ss_dssp             EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT---SSSSTHHH-HTCCCSEE---EECGGGG-
T ss_pred             eEEEEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCcc---CCCccccc-CCcCCcee---eecccCC-
Confidence            6666654445556765 55666999999999999999999999998632   12223222 23334555   5799998 


Q ss_pred             cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      .|..++.+.+   .++..    ..........+.+...++..++...|+-  +    +  -....+++++..+++.+.|+
T Consensus       250 gG~~~~~~~~---~~~~~----~~~~~~~~g~T~~gnPla~aaa~a~L~~--l----~--~~~~~~~v~~~g~~l~~~L~  314 (387)
T d1vefa1         250 GGVPLGVAVM---REEVA----RSMPKGGHGTTFGGNPLAMAAGVAAIRY--L----E--RTRLWERAAELGPWFMEKLR  314 (387)
T ss_dssp             TTSSCEEEEE---EHHHH----HTSCTTSSCCSSTTCHHHHHHHHHHHHH--H----H--HHTTHHHHHHHHHHHHHHHH
T ss_pred             CCcccccccc---ceeee----eccccCCccccCCCCcchhhhcccchhh--c----c--cccccchHhhhhHHHHHHHH
Confidence            6887887644   44422    2222211122223344444444333321  1    0  02345666777778888887


Q ss_pred             hccCCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHh
Q 015283          340 AKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY  406 (410)
Q Consensus       340 ~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l  406 (410)
                       ++..+. +.-+ ...|.+.-+.+   ....+.+++.+.|+.+.+.|    |++.+ ..|++++++++++++++|
T Consensus       315 -~l~~~~-v~~v-rg~Gl~~~ie~~~~~~~~~~~~~~~~g~l~~~~g~~~ir~~Ppl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         315 -AIPSPK-IREV-RGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             -TSCCTT-EEEE-EEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             -hcCCCc-eEEE-eecceEEEEEEeCCchHHHHHHHHHCCCeEEecCCCEEEEECCccCCHHHHHHHHHHHHHHh
Confidence             664211 1111 22233322222   23444444444588776654    66643 249999999999999987

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.2e-16  Score=146.68  Aligned_cols=331  Identities=11%  Similarity=0.058  Sum_probs=192.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...||+..|.--...|+.  +|.+.+|+.++++.. +...+....-..++.+.+++.. .       .+.+.+  +.+|+
T Consensus        41 ~~ylD~~~g~~~~~lGh~--~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~v~~--~~sGs  108 (404)
T d2byla1          41 RKYFDFLSSISAVNQGHC--HPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLF-N-------YHKVLP--MNTGV  108 (404)
T ss_dssp             CEEEESSHHHHTCTTCBT--CHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHH-T-------CSEEEE--ESSHH
T ss_pred             CEEEEecCCHHHHhhcCC--CHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcc-c-------cccccc--ccCcc
Confidence            568898887653345654  589999999888652 2122212223345555555552 2       357888  89999


Q ss_pred             hHHHHHHHHHHHhC--------CCCEEEEcCCCCcchh-hhhhhCCC---------CccceeeecCCCcccChhhHHHHH
Q 015283          113 GSLRLAAALIERYF--------PGAKVLISSPTWGNHK-NIFNDARV---------PWSEYRYYDPKTVGLDFEGMIADI  174 (410)
Q Consensus       113 ~a~~~~~~~~~~~~--------~gd~Vl~~~p~y~~~~-~~~~~~g~---------~~~~v~~~~~~~~~~d~~~l~~~i  174 (410)
                      +|++.+.++.+.+.        ....++...-+|.... ..+...+.         ....+...+    -.|++.+++.+
T Consensus       109 eA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p----~~d~~~l~~~l  184 (404)
T d2byla1         109 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP----YNDLPALERAL  184 (404)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEEC----TTCHHHHHHHH
T ss_pred             ccchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEec----ccCHHHHHHhc
Confidence            99999988776431        2246666666654332 22111111         001111111    13788888888


Q ss_pred             hcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283          175 KAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY  253 (410)
Q Consensus       175 ~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  253 (410)
                      ..  ++..++++...+...|.. ++++-+++|.++|++||+++|.||++.+|+-.   ...+....+ +-.++++   ++
T Consensus       185 ~~--~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~---G~~~a~~~~-gv~PDi~---~~  255 (404)
T d2byla1         185 QD--PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLART---GRWLAVDYE-NVRPDIV---LL  255 (404)
T ss_dssp             TS--TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT---SSSSGGGGG-TCCCSEE---EE
T ss_pred             CC--CCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccc---cccchhhhc-CCCCCEE---EE
Confidence            65  345556655556666754 45666999999999999999999999888632   233333322 2223444   78


Q ss_pred             cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015283          254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK  333 (410)
Q Consensus       254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (410)
                      +|.++..++.+|.+++   ++++.+.    +.......+.....++..++...|+.  +    ++  +...++.+++.++
T Consensus       256 gK~l~gG~~p~~av~~---~~~i~~~----~~~~~~~~T~~gnpl~~aaa~a~L~~--i----~~--~~l~~~~~~~g~~  320 (404)
T d2byla1         256 GKALSGGLYPVSAVLC---DDDIMLT----IKPGEHFSTYGGNPLGCRVAIAALEV--L----EE--ENLAENADKLGII  320 (404)
T ss_dssp             CGGGGTTSSCCEEEEE---CHHHHTT----SCTTSSCCSSTTCHHHHHHHHHHHHH--H----HH--TTHHHHHHHHHHH
T ss_pred             CchhhCCCccceeeee---chhhhhc----cCCCCCCcCCCcCHHHHHHHHHHHHH--H----Hh--cCchhhhhHhhHH
Confidence            9999843378899755   6663332    22222222223344444444333331  1    00  2344566666777


Q ss_pred             HHHHhhhccCCCCCcccccCCcceeeec---C---CC-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHH
Q 015283          334 LFDSLSAKDKSGKDWSFILRQIGMFSFT---G---LN-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADA  401 (410)
Q Consensus       334 l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~---~~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~  401 (410)
                      +.+.|. ++..+ .+..+ ...|++.-+   .   .. .++..++++ +||++.+.+    ||+.+ ..|++++++++++
T Consensus       321 l~~~l~-~l~~~-~i~~v-Rg~Gl~~~i~~~~~~~~~~~~~~~~l~~-~Gvl~~~~~~~~i~l~PpL~it~~~id~~~~~  396 (404)
T d2byla1         321 LRNELM-KLPSD-VVTAV-RGKGLLNAIVIKETKDWDAWKVCLRLRD-NGLLAKPTHGDIIRFAPPLVIKEDELRESIEI  396 (404)
T ss_dssp             HHHHHH-TSCTT-TEEEE-EEETTEEEEEECCCSSCCHHHHHHHHHH-TTEECEEEETTEEEECCCTTCCHHHHHHHHHH
T ss_pred             HHHHHH-hhccc-cceee-eecccEEEEEEecCCchhHHHHHHHHHh-CCeEEecCCCCEEEEECCcCCCHHHHHHHHHH
Confidence            777777 65321 11112 223333111   1   12 345677776 599998743    56533 2499999999999


Q ss_pred             HHHHhhh
Q 015283          402 IIDSYHN  408 (410)
Q Consensus       402 l~~~l~~  408 (410)
                      |+++|.+
T Consensus       397 l~~al~~  403 (404)
T d2byla1         397 INKTILS  403 (404)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHc
Confidence            9999875

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.71  E-value=6.3e-16  Score=143.97  Aligned_cols=319  Identities=13%  Similarity=0.089  Sum_probs=185.3

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      |+.++++.|++++....    .+++..  ..-..+.|+.+++++....     ...|++  +.|||++.+.+  +.+.+.
T Consensus        25 GP~~v~~~Vl~am~~~~----~~hr~~ef~~i~~~~r~~l~~ll~~~~-----~~~i~~--~g~gT~~~~~~--~~~~~~   91 (377)
T d1vjoa_          25 GPSNAHPSVLQAMNVSP----VGHLDPAFLALMDEIQSLLRYVWQTEN-----PLTIAV--SGTGTAAMEAT--IANAVE   91 (377)
T ss_dssp             SCCCCCHHHHHHHSSCC----CCTTSHHHHHHHHHHHHHHHHHHTCCC-----SCEEEE--SSCHHHHHHHH--HHHHCC
T ss_pred             CCCCCCHHHHHHhCcCC----CCCCCHHHHHHHHHHHHHHHHHhCCCC-----CeEEEE--cCcHHHHHHHH--HHhccc
Confidence            66677899998875432    122322  2346788888888875431     345666  88899999998  555677


Q ss_pred             CCCEEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283          127 PGAKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK  204 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~  204 (410)
                      +|+++++....+....  ......+.....+..  ..+...+.+..+.....  +.+.++.+++.+|.||...+   +++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~tg~~~~---i~~  164 (377)
T d1vjoa_          92 PGDVVLIGVAGYFGNRLVDMAGRYGADVRTISK--PWGEVFSLEELRTALET--HRPAILALVHAETSTGARQP---LEG  164 (377)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTT
T ss_pred             cccccceeeechhhhhhhhhhhhhccccccccc--CCCCcccchhhhhhhhc--Ccceeeeeeeeeccceeeec---hhh
Confidence            9999998887765442  233344544444443  33334455555544443  25555666778899999555   557


Q ss_pred             HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHH
Q 015283          205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL  284 (410)
Q Consensus       205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~  284 (410)
                      +.++|+++|.++++|.+++ ++..+.+.+         ..+.++++.|..|.++.|+ .+|+++.   ++..++......
T Consensus       165 i~~~~~~~g~~~~vDa~~~-~g~~~~~~~---------~~~~d~~~~s~~K~~~gp~-g~~~~~~---~~~~~~~~~~~~  230 (377)
T d1vjoa_         165 VGELCREFGTLLLVDTVTS-LGGVPIFLD---------AWGVDLAYSCSQKGLGCSP-GASPFTM---SSRAIEKLQRRR  230 (377)
T ss_dssp             HHHHHHHHTCEEEEECTTT-TTTSCCCTT---------TTTCSEEECCSSSTTCSCS-SCEEEEE---CHHHHHHHHTCS
T ss_pred             hhhhhhhccceEEEecchh-hhhhhhccc---------ccccceeeecccccccCCC-EEEEecc---hhhHHhhhhccC
Confidence            7777999999999999954 442222222         2345677788888764332 2455433   555444332100


Q ss_pred             --------------H-hhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283          285 --------------K-RLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW  348 (410)
Q Consensus       285 --------------~-~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~  348 (410)
                                    . ......+..++......+ ...+...     -....+...++.+++..++.+.+. ..+.....
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~g~~~~~~~~~~~~~~l~~~l~-~~~~~~~~  304 (377)
T d1vjoa_         231 TKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLI-----AQEGLANCWQRHQKNVEYLWERLE-DIGLSLHV  304 (377)
T ss_dssp             SCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HTTCCBSS
T ss_pred             CCCcceeeccchhhhccCcccccccccceechhhhHHHHhhh-----hhcCchHHHHHHHHHhhhhhhhhh-ccCceeec
Confidence                          0 001111223333322222 1111100     022245677777888888888887 76642111


Q ss_pred             ccccCCcce--eeec-CCCHHH-HHHhhhcCcEEEcCC------C--eEE-ecC-CCcccHHHHHHHHHHHhh
Q 015283          349 SFILRQIGM--FSFT-GLNKAQ-SDNMTNKWHVYMTKD------G--RIS-LAG-LSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       349 ~~~~~~~~~--~~~~-~~~~~~-~~~ll~~~gi~v~~~------g--Ris-~~~-~~~~~i~~~~~~l~~~l~  407 (410)
                      .......+.  |... +++.+. ...|++++||.+..|      +  ||+ ++. .++|++++++++|+++++
T Consensus       305 ~~~~rs~~v~~~~~p~~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         305 EKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             CGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             ChHhcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHHhC
Confidence            111111122  2222 345544 567778889998765      2  998 443 268899999999999874

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=2e-16  Score=149.35  Aligned_cols=338  Identities=11%  Similarity=0.040  Sum_probs=186.4

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc-C-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE-Y-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++....... + .......++.+.+.+.+....     .+.+.+  +++|
T Consensus        40 ~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~-----~~~v~f--~~sG  110 (425)
T d1sffa_          40 REYLDFAGGIAVLNTGHL--HPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDF-----AKKTLL--VTTG  110 (425)
T ss_dssp             CEEEESSHHHHTCTTCBT--CHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSS-----CEEEEE--ESSH
T ss_pred             CEEEEcCcCHHhhcccCC--cHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhhhhhcc-----cceeee--eccc
Confidence            568898887542345554  6999999998886522111 1 112233456666666643221     356788  8999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCc----------c---cee--eecCCCcccC-hhhHHHHH
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPW----------S---EYR--YYDPKTVGLD-FEGMIADI  174 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~----------~---~v~--~~~~~~~~~d-~~~l~~~i  174 (410)
                      ++|.+.+.++.+.+..-.+|+....+|.+...... ..|...          .   ..+  ....+..... ....++.+
T Consensus       111 seA~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (425)
T d1sffa_         111 SEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF  190 (425)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred             cchhhhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHH
Confidence            99999999888877766889988888876543222 222110          0   011  0001101000 11111211


Q ss_pred             --hcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283          175 --KAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ  251 (410)
Q Consensus       175 --~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  251 (410)
                        ........++++...+...|.. ++++-++.|.++|++||+++|.||++.+++-.   ...+....+ +..++++   
T Consensus       191 ~~~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~---g~~~a~~~~-gv~PDi~---  263 (425)
T d1sffa_         191 KNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRT---GTLFAMEQM-GVAPDLT---  263 (425)
T ss_dssp             HHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT---SSSSGGGGT-TSCCSEE---
T ss_pred             HhcccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCc---chhhHHHhc-CCCccce---
Confidence              1112344555554455556654 56667999999999999999999999987532   222232222 2334544   


Q ss_pred             cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh---CChhhHHHHHHHHHHHHHHHH
Q 015283          252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEMEMMAGRIK  328 (410)
Q Consensus       252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~~~~~~  328 (410)
                      +++|.+| .|+.+|.+++   ++++.+.+    .......+.....++..++...|   .+.+           ..++.+
T Consensus       264 ~~gK~l~-gG~P~~av~~---~~~i~~~~----~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~-----------~~~~~~  324 (425)
T d1sffa_         264 TFAKSIA-GGFPLAGVTG---RAEVMDAV----APGGLGGTYAGNPIACVAALEVLKVFEQEN-----------LLQKAN  324 (425)
T ss_dssp             EECGGGG-TSSCCEEEEE---EHHHHTTS----CTTSBCCSSSSCHHHHHHHHHHHHHHHHTT-----------HHHHHH
T ss_pred             ecccccC-CCcceEEEEE---cHHHHHhh----CCCCCCCCCCcCHHHHHHHHHHHHHHHHhh-----------hhhhhh
Confidence            5899998 6889999755   66643332    22222222233344444443333   2222           223333


Q ss_pred             HHHHHHHHHhhh---ccCCCCCcccccCCcceeee--cC-----C-C----HHHHHHhhhcCcEEEcCCC------eEEe
Q 015283          329 NVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSF--TG-----L-N----KAQSDNMTNKWHVYMTKDG------RISL  387 (410)
Q Consensus       329 ~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~--~~-----~-~----~~~~~~ll~~~gi~v~~~g------Ris~  387 (410)
                      +..+++.+.+.+   +.+.   +..+...+.++.+  ..     . +    ..+..++++ .||++.++|      ||+.
T Consensus       325 ~~g~~l~~~l~~~~~~~~~---v~~vrg~Gl~~~i~f~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~g~~~n~i~~~P  400 (425)
T d1sffa_         325 DLGQKLKDGLLAIAEKHPE---IGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARD-KGLILLSCGPYYNVLRILV  400 (425)
T ss_dssp             HHHHHHHHHHHHHHHTCTT---EEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHH-TTEECEEESTTSCEEEECC
T ss_pred             hhhhhhhhhhhhhHhhCCc---eEEEEccccEEEEEEeccCccCCccHHHHHHHHHHHHH-CCCEEeccCCCCCEEEEEC
Confidence            333333333320   3332   1122223333211  11     0 2    234556666 599987754      5654


Q ss_pred             c-CCCcccHHHHHHHHHHHhhhcC
Q 015283          388 A-GLSLAKCEYLADAIIDSYHNVS  410 (410)
Q Consensus       388 ~-~~~~~~i~~~~~~l~~~l~~~~  410 (410)
                      + ..|+++|+++++++++++++++
T Consensus       401 pL~it~~eid~~l~~l~~al~eik  424 (425)
T d1sffa_         401 PLTIEDAQIRQGLEIISQCFDEAK  424 (425)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3 2499999999999999998763

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.69  E-value=7e-15  Score=134.93  Aligned_cols=216  Identities=15%  Similarity=0.116  Sum_probs=148.2

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~  151 (410)
                      .+....|.+.+++...+.       ..++   +++|+.|+..+  ++..+.+||+|+++...|.+....+    ...|.+
T Consensus        62 nPT~~~LE~~la~LEgg~-------~a~~---~sSGmaAi~~~--l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~  129 (397)
T d1y4ia1          62 NPTTDALEKKLAVLERGE-------AGLA---TASGISAITTT--LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGIN  129 (397)
T ss_dssp             CHHHHHHHHHHHHHHTCS-------EEEE---ESSHHHHHHHH--HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCE
T ss_pred             CHHHHHHHHHHHHHhCCc-------ccee---ehHHHHHHHHH--HhhccCCCCeeeeecccccccchhhhcccCCCceE
Confidence            445678888898885332       2333   58999999887  6667889999999999998776544    467877


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      +..++.       -|.+.+++.+++   +++++++-+|.|||..+.   |+++|+++|+++|+++++|..|.....-   
T Consensus       130 ~~~vd~-------~d~~~~~~~i~~---~Tklv~~Esp~NP~l~v~---Di~~i~~iA~~~gi~~vvDnT~atP~~~---  193 (397)
T d1y4ia1         130 VRFVDA-------GKPEEIRAAMRP---ETKVVYIETPANPTLSLV---DIETVAGIAHQQGALLVVDNTFMSPYCQ---  193 (397)
T ss_dssp             EEEECT-------TSHHHHHHHCCT---TEEEEEEESSCTTTCCCC---CHHHHHHHHHHTTCEEEEECTTTCTTTC---
T ss_pred             eeccCC-------CCHHHHHHhcCC---CCcEEEecCCcccceeec---ccHHHHHHhhcCCceEEecCcccCcccC---
Confidence            777654       278899998875   889999999999999955   5667788899999999999998654421   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH-HHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS-QLKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                       .  ++     ..+.+|++.|.+|.++-.+--+|..  ++.+++.+.+.+. .+++.   .-...+......+.+-|+.-
T Consensus       194 -~--Pl-----~~GaDivihS~TKyi~Ghsdvl~G~--v~~~~~~~~~~r~~~~~~~---~G~~l~p~~a~l~~rgl~TL  260 (397)
T d1y4ia1         194 -Q--PL-----QLGADIVVHSVTKYINGHGDVIGGI--IVGKQEFIDQARFVGLKDI---TGGCMSPFNAWLTLRGVKTL  260 (397)
T ss_dssp             -C--GG-----GGTCSEEEEETTTTTTCSSCCCCEE--EEECHHHHHHHHHTHHHHT---TCCCCCHHHHHHHHHHHTTH
T ss_pred             -c--ch-----hcCCCEEEEehhhhcCCCcceeeec--cCCCHHHHHHHHHHHHHhC---cCCcCCHHHHHHHHcCcCcH
Confidence             1  11     1235699999999997666666665  3346665444321 12211   12245555556666666654


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .          -..++..++...+.+.|+ +.+
T Consensus       261 ~----------lRm~~~~~nA~~lA~~L~-~hp  282 (397)
T d1y4ia1         261 G----------IRMERHCENALKIARFLE-GHP  282 (397)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHH-TCT
T ss_pred             H----------HHHHHHHHHHHHHHHHHH-hCC
Confidence            3          333445556667777777 654

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=6.6e-16  Score=140.72  Aligned_cols=325  Identities=16%  Similarity=0.175  Sum_probs=196.5

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC---Cccc---HHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP---IEGL---AAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .-|+|-..++       .+++.+++++...+.+....+|+.   -.|.   +++.+...+...+.++.     +-+-++.
T Consensus        27 ~~i~LiaSEN-------~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~a-----~~anVqp   94 (416)
T d1dfoa_          27 EHIELIASEN-------YTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGA-----DYANVQP   94 (416)
T ss_dssp             HSEECCTTCC-------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC-----SEEECCC
T ss_pred             cCceEecCcc-------cCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhCC-----Ccceeec
Confidence            4588876654       237999999877664433333432   1233   22222221221222221     1222345


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC---CC--CccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA---RV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~---g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      .+|+.|+..+  +.+.+.|||+|+..++..+++.+.-...   |.  +.+.+++  +.+..+|++++++...+.  ++++
T Consensus        95 ~SGs~AN~av--~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~--d~~~~IDyd~l~~~a~~~--kPkl  168 (416)
T d1dfoa_          95 HSGSQANFAV--YTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGI--DATGHIDYADLEKQAKEH--KPKM  168 (416)
T ss_dssp             SSHHHHHHHH--HHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECB--CSSSSBCHHHHHHHHHHH--CCSE
T ss_pred             ccCccHHHHH--HHHhcCCCCeeeeccccccccccccccccccCceEEEEeccc--CCccCccHHHHHHHHHHh--ccce
Confidence            8888888887  5666889999999999888876544322   22  2333443  345669999999998774  4556


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC-CCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE  262 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  262 (410)
                      ++...-.+|  .   .-+++++.++|++.|.+++.|.+|.. +..++..+.  ++    +  ..+++.+|++|+|  +|-
T Consensus       169 Ii~G~S~y~--r---~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~s--P~----~--~aDvvt~tThKtl--rGP  233 (416)
T d1dfoa_         169 IIGGFSAYS--G---VVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPN--PV----P--HAHVVTTTTHKTL--AGP  233 (416)
T ss_dssp             EEEECSSCC--S---CCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCC--CT----T--TSSEEEEESSSTT--CCC
T ss_pred             EEecccccc--c---ccCHHHHHHHHHhcCceEEcchhhhhcceeccccCC--cc----c--ccceeeeehhhcc--cCC
Confidence            665433333  3   33577778889999999999999642 222111111  11    1  1468889999997  577


Q ss_pred             CcceEEEEeC--CchhHHHHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          263 RIGAMNVVCS--SSDLAARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       263 r~G~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      |-|.+.  ++  ++++.+    .+....++...+.+.....++ +..+.+ ..    ....+.+.+++.++.+.|.+.|.
T Consensus       234 rggiI~--~~~~~~~~~~----~i~~avfPg~qggp~~~~iaa~Aval~E-a~----~~~fk~Y~~qvv~NA~~La~~L~  302 (416)
T d1dfoa_         234 RGGLIL--AKGGSEELYK----KLNSAVFPGGQGGPLMHVIAGKAVALKE-AM----EPEFKTYQQQVAKNAKAMVEVFL  302 (416)
T ss_dssp             SCEEEE--ESSCCHHHHH----HHHHHHTTTTCSSCCHHHHHHHHHHHHH-TT----SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEE--eccchHhHHH----HHHhhhCcccccCccHHHHHHHHHHHHH-Hc----CHHHHHHHHHHHHHHHHHHHHHH
Confidence            878863  33  245333    444444443333332222222 222221 11    22346888899999999999999


Q ss_pred             hccCCCCCcccccCCcc-eeeec-----CCCHHHHHHhhhcCcEEEc----CC---------C-eEEec-----CCCccc
Q 015283          340 AKDKSGKDWSFILRQIG-MFSFT-----GLNKAQSDNMTNKWHVYMT----KD---------G-RISLA-----GLSLAK  394 (410)
Q Consensus       340 ~~~g~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~ll~~~gi~v~----~~---------g-Ris~~-----~~~~~~  394 (410)
                       +.|+    .+....+- ..+++     +++...+.+.|++.||.+.    |+         | ||..+     ++.+++
T Consensus       303 -~~G~----~iv~ggTdnHlvlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d  377 (416)
T d1dfoa_         303 -ERGY----KVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAE  377 (416)
T ss_dssp             -HTTC----EEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHH
T ss_pred             -hCCc----ccccCCCCCceeEEEecccCCCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHH
Confidence             8883    55433222 33444     3467889999999999873    32         3 88643     468899


Q ss_pred             HHHHHHHHHHHhhh
Q 015283          395 CEYLADAIIDSYHN  408 (410)
Q Consensus       395 i~~~~~~l~~~l~~  408 (410)
                      ++++.+.|.++++.
T Consensus       378 ~~~iA~~I~~~l~~  391 (416)
T d1dfoa_         378 AKELAGWMCDVLDS  391 (416)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHc
Confidence            99999999998864

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=3.6e-15  Score=140.42  Aligned_cols=342  Identities=10%  Similarity=0.024  Sum_probs=195.7

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.......+  .+.....++.+.+.+.....      .+.+.+  +.+|
T Consensus        43 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~------~~~v~f--~~sG  112 (429)
T d1s0aa_          43 RRLVDGMSSWWAAIHGYN--HPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQP------LECVFL--ADSG  112 (429)
T ss_dssp             CEEEESSTTTTTCTTCBS--CHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTT------CCEEEE--ESSH
T ss_pred             CEEEECcccHHHHhhcCC--cHHHHHHHHHHHHhcCCcccCCccchHHHHHHHHHHhhhccC------cceeee--cccc
Confidence            467899877543355655  59999999887755221111  12222334555555543221      467888  8999


Q ss_pred             hhHHHHHHHHHHHhC-----CCCEEEEcCCCCcchhhhh-hhCCC-------------Cccceeeec----CCCcccChh
Q 015283          112 TGSLRLAAALIERYF-----PGAKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYD----PKTVGLDFE  168 (410)
Q Consensus       112 t~a~~~~~~~~~~~~-----~gd~Vl~~~p~y~~~~~~~-~~~g~-------------~~~~v~~~~----~~~~~~d~~  168 (410)
                      ++|++.+.++.+.+.     +..+|+....+|.+..... ...+.             .....|...    ......+++
T Consensus       113 seA~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (429)
T d1s0aa_         113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV  192 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred             ccchhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhh
Confidence            999999887776542     3368888887775543211 11111             111111100    011122455


Q ss_pred             hHHHHHhcCCCCcEEEEeCCC-CCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283          169 GMIADIKAAPGGSFILLHGCA-HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME  246 (410)
Q Consensus       169 ~l~~~i~~~~~~~~~ii~~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  246 (410)
                      .+++.+.+.++....+++... ++.-|. .+|++-+++|.++|++||+++|.||++.+|+-.   ...+.... .+..++
T Consensus       193 ~~~~~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRt---G~~~~~~~-~~v~PD  268 (429)
T d1s0aa_         193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRT---GKLFACEH-AEIAPD  268 (429)
T ss_dssp             HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTT---SSSSGGGG-GTCCCS
T ss_pred             hhhhhhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccccccc---cccccccc-ceeccc
Confidence            555555554455666665444 355555 457777999999999999999999999998632   22333322 233345


Q ss_pred             EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHHHHH---hCChhhHHHHHHHHHH
Q 015283          247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEM  322 (410)
Q Consensus       247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~~~~  322 (410)
                      ++   .++|.++-.+..+|.+++   ++++.+.+...-.. .....+.....++..++...   +.++           +
T Consensus       269 i~---~~gK~l~gG~~p~~av~~---~~~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~~-----------~  331 (429)
T d1s0aa_         269 IL---CLGKALTGGTMTLSATLT---TREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESG-----------D  331 (429)
T ss_dssp             EE---EECGGGGTSSSCCEEEEE---CHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTC-----------H
T ss_pred             cc---ccccccccccccccchhh---HHHHHhccCCCCCcceeecCCCCCCcccchhhhccccccccc-----------c
Confidence            55   579999856688999755   77755544321111 11111223334444444333   3232           3


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC---eEEec-CCCcc
Q 015283          323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RISLA-GLSLA  393 (410)
Q Consensus       323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g---Ris~~-~~~~~  393 (410)
                      ..++.++..+++.+.|+ ++.....+.. ....|.+.-+.+    .. .+...+++ +|+++.+.|   ||+.+ ..|++
T Consensus       332 ~~~~~~~~g~~l~~~L~-~l~~~~~v~~-vrg~Gl~~~~e~~~~~~~~~~~~~~~~-~Gl~~~~~g~~i~~~Ppl~it~~  408 (429)
T d1s0aa_         332 WQQQVADIEVQLREQLA-PARDAEMVAD-VRVLGAIGVVETTHPVNMAALQKFFVE-QGVWIRPFGKLIYLMPPYIILPQ  408 (429)
T ss_dssp             HHHHHHHHHHHHHHHHG-GGGGCTTEEE-EEEETTEEEEEESSCBCHHHHHHHHHH-TTEECCCBTTEEEECCCTTCCHH
T ss_pred             ccchhhHHHHHHHHHHH-HhccCCceEE-EeecccEEEEEecCcccHHHHHHHHHH-CCcEEEecCCEEEEeCCcCCCHH
Confidence            45566667777777776 5531111111 223344322221    33 34555655 699999887   66533 24999


Q ss_pred             cHHHHHHHHHHHhhhc
Q 015283          394 KCEYLADAIIDSYHNV  409 (410)
Q Consensus       394 ~i~~~~~~l~~~l~~~  409 (410)
                      +|++++++|.+++++.
T Consensus       409 eid~~~~~l~~al~e~  424 (429)
T d1s0aa_         409 QLQRLTAAVNRAVQDE  424 (429)
T ss_dssp             HHHHHHHHHHHHTSSG
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999998864

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=7.1e-16  Score=146.96  Aligned_cols=188  Identities=12%  Similarity=-0.008  Sum_probs=125.5

Q ss_pred             HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHH-HHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283           80 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAAL-IERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRY  157 (410)
Q Consensus        80 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~-~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~  157 (410)
                      ..+...+.+++.+..|.+. .....+  ++|||++...+... .+... +++.|+++...|.++...+..+|.+.+.|+.
T Consensus        93 ~~le~~~~~~~~~l~g~~~-~~~~~~--~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~  169 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHS-VASCFV--VPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN  169 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTT-CCEEEE--ESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCc-ccCccc--cccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEe
Confidence            4566666666554444322 133444  67887665554222 22233 6789999999999999999999999888754


Q ss_pred             e-cCCCcccChhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283          158 Y-DPKTVGLDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS  235 (410)
Q Consensus       158 ~-~~~~~~~d~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~  235 (410)
                      . +.+++.+|+++|++.+++. .+++.+++.++|+|++|.   .+++++|+++|++||+++++|++|..+...   ... 
T Consensus       170 ~~~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~---~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~---~~~-  242 (445)
T d3bc8a1         170 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRV---PDRLEELAVICANYDIPHVVNNAYGLQSSK---CMH-  242 (445)
T ss_dssp             EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBC---CCCHHHHHHHHHHHTCCEEEECTTTTTCHH---HHH-
T ss_pred             eccCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCee---ehhHHHHHHHHHHhCCcEEEEccchhhhhh---ccc-
Confidence            2 3567889999999998653 235778888999999999   456778888899999999999998754421   000 


Q ss_pred             HhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283          236 SVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV  280 (410)
Q Consensus       236 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~  280 (410)
                      ...........+++..|.+|.++.|. ..|++  ..++.+..+.+
T Consensus       243 ~~~~~~~~~~vd~~~~s~hK~~~~p~-g~~~l--~~~~~~~~~~~  284 (445)
T d3bc8a1         243 LIQQGARVGRIDAFVQSLDKNFMVPV-GGAII--AGFNEPFIQDI  284 (445)
T ss_dssp             HHHHHHHHSCCCEEEEEHHHHHSCCS-SCEEE--EESCHHHHHHH
T ss_pred             cchhccCcCCcceEEecCccccccCC-CCcee--eeCChHHHHHH
Confidence            11111223345577889999886443 34555  45666644443

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=5.4e-15  Score=135.41  Aligned_cols=215  Identities=13%  Similarity=0.091  Sum_probs=145.7

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      ......|.+.++++-..        +..++  +++|+.|+..   +++.+.+||+|++..+.|++....++    ..|.+
T Consensus        48 nPt~~~le~~la~LE~~--------~~a~~--fsSGMaAisa---ll~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~  114 (380)
T d1ibja_          48 NPTRDALESLLAKLDKA--------DRAFC--FTSGMAALSA---VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVV  114 (380)
T ss_dssp             CHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHH---HHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCE
T ss_pred             ChHHHHHHHHHHHHcCC--------ceEEe--hhhHHHHHHH---HHHhhCCCCEEEEEecccccccchhhhhhcccccc
Confidence            44567899999988532        23334  5889998864   46667799999999999998876665    34555


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      +..++.       .|.+++++.+++   +++++++.+|.|||..+.+   +++|+++|+++|+++|+|+.+.....-   
T Consensus       115 ~~~~d~-------~~~~~~~~ai~~---~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vVDnT~atP~~~---  178 (380)
T d1ibja_         115 VKRVNT-------TKLDEVAAAIGP---QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVLS---  178 (380)
T ss_dssp             EEEECT-------TSHHHHHHHCCS---SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTTC---
T ss_pred             ccccCc-------chHHHHHHHhcc---CccEEEecccccccccccc---HHHHHHHHHHcCCeEEeeccccccccc---
Confidence            544432       367888888865   8899999999999999665   567777799999999999998654421   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA  311 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~  311 (410)
                       .  ++     ..+.++++.|.+|.++-.|--+|..+ +.+++++.+++.....    .............+.+-|++-.
T Consensus       179 -~--Pl-----~~GaDiVvhS~TKyi~GhsDv~~G~v-~~~~~~~~~~~~~~~~----~~G~~l~p~~a~ll~rgl~Tl~  245 (380)
T d1ibja_         179 -R--PL-----ELGADIVMHSATKFIAGHSDVMAGVL-AVKGEKLAKEVYFLQN----SEGSGLAPFDCWLCLRGIKTMA  245 (380)
T ss_dssp             -C--GG-----GTTCSEEEEETTTTTTCSSCCCCEEE-EECSHHHHHHHHHHHH----HTTCBCCHHHHHHHHHHHTTHH
T ss_pred             -c--cc-----ccCCCEEEecccceeccccCcccccc-ccchhhHHHHHHhhcc----ccCCcCCHHHHHHHHhcchhhh
Confidence             1  11     22467999999999975555455542 3455665555544332    1222455555566666666542


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                                ...++..++...+.+.|+ +.+
T Consensus       246 ----------lRm~~~~~nA~~lA~~L~-~hp  266 (380)
T d1ibja_         246 ----------LRIEKQQENARKIAMYLS-SHP  266 (380)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHH-TCT
T ss_pred             ----------hhHHHHHHHHHHHHHHHH-hCC
Confidence                      334555566677777777 654

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.68  E-value=2.8e-15  Score=138.63  Aligned_cols=333  Identities=13%  Similarity=0.114  Sum_probs=203.6

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc------CCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .-|+|-..++       ++++.|++++...+.+....+|+      ...-++++.+...+...+.++... ..+-+-++.
T Consensus        32 ~~l~LIaSEN-------~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~-~~~~anVqp  103 (470)
T d1rv3a_          32 VGLELIASEN-------FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDP-QCWGVNVQP  103 (470)
T ss_dssp             SSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCT-TTEEEECCC
T ss_pred             cCceEecCCC-------cCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCh-hhccccccc
Confidence            4588886654       24799999987766443333332      222223333333233333333211 123444567


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh---CC-------CCccceeeecCCCcccChhhHHHHHhcCC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND---AR-------VPWSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~---~g-------~~~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      .+|+.|...+  +.+.+.|||+|+..+...+++...-..   .+       .+...+++ +.+++.+|++++++..++. 
T Consensus       104 ~SGs~An~av--~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v-~~~~~~IDyd~l~~~a~~~-  179 (470)
T d1rv3a_         104 YSGSPANFAV--YTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV-NPDTGYIDYDRLEENARLF-  179 (470)
T ss_dssp             SSHHHHHHHH--HHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB-CTTTCSBCHHHHHHHHHHH-
T ss_pred             cCCccHHHHH--HHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEE-ecccCcccHHHHHHHHHhh-
Confidence            8899988887  566788999999999877766543211   11       23344555 3466789999999998774 


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       +++++++..-.+|-     .-+++++.++|++.|.+|+.|-+|. ++..++.-++  ++    +  ..+++.+|.+|+|
T Consensus       180 -kPklIi~G~S~y~r-----~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~s--Pl----~--~aDvvt~tTHKtl  245 (470)
T d1rv3a_         180 -HPKLIIAGTSCYSR-----NLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPS--PF----E--HCHVVTTTTHKTL  245 (470)
T ss_dssp             -CCSEEEECCSSCCS-----CCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCC--GG----G--TCSEEEEESSGGG
T ss_pred             -CcceEeechhhccc-----cCCHHHHHHHHhccCCeEEecchhhhhhccccccCC--hh----h--eeeeeeeehhhhc
Confidence             55666765444444     3357777778999999999999964 2332211122  11    1  2468889999997


Q ss_pred             cccCCCcceEEEEeCCc----------hhHHHHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSS----------DLAARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGR  326 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~  326 (410)
                        +|-|-|.+.  ++.+          +....+.+.+....++...+.+.....++ +..+.     +.+..+.+++.++
T Consensus       246 --rGPrgGiI~--~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~-----ea~~~~fk~Ya~q  316 (470)
T d1rv3a_         246 --RGCRAGMIF--YRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALK-----QAMTPEFKEYQRQ  316 (470)
T ss_dssp             --CCCSCEEEE--EECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHH-----HHTSHHHHHHHHH
T ss_pred             --cCCcceEEE--EccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHH-----HhcChHHHHHHHH
Confidence              577877763  3322          00001444455555554433333333333 22222     1123345788889


Q ss_pred             HHHHHHHHHHHhhhccCCCCCcccccCCccee-eec-----CCCHHHHHHhhhcCcEEEc----CC--------C-eEEe
Q 015283          327 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFT-----GLNKAQSDNMTNKWHVYMT----KD--------G-RISL  387 (410)
Q Consensus       327 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~ll~~~gi~v~----~~--------g-Ris~  387 (410)
                      +.++.+.|.+.|. +.|+    .+....+-.+ +++     +++...+++.|++.||.+.    |+        | ||..
T Consensus       317 vv~NAk~La~~L~-~~G~----~v~~ggTdnHlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT  391 (470)
T d1rv3a_         317 VVANCRALSAALV-ELGY----KIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGT  391 (470)
T ss_dssp             HHHHHHHHHHHHH-HTTC----EEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEEC
T ss_pred             HHHHHHHHHHHHH-hCCc----eeccCCCCCceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecC
Confidence            9999999999999 8884    4443333333 443     4578889999999999874    22        3 8863


Q ss_pred             c-----CCCcccHHHHHHHHHHHhh
Q 015283          388 A-----GLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       388 ~-----~~~~~~i~~~~~~l~~~l~  407 (410)
                      +     ++.++++.++.+.|.++++
T Consensus       392 ~alTtrG~~e~dm~~iA~~I~~~l~  416 (470)
T d1rv3a_         392 PALTSRGLLEKDFQKVAHFIHRGIE  416 (470)
T ss_dssp             HHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            3     4688999999999988874

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.66  E-value=4.8e-15  Score=136.62  Aligned_cols=330  Identities=14%  Similarity=0.135  Sum_probs=188.2

Q ss_pred             CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC------CcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283           35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG  108 (410)
Q Consensus        35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t  108 (410)
                      .-|+|-..++       .+++.|++++...+.+.....|+.      ..-++++.....+...+.++... .++-+-++.
T Consensus        28 ~~l~LiaSEN-------~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~-a~w~vNVqp   99 (463)
T d2a7va1          28 RGLELIASEN-------FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDP-AQWGVNVQP   99 (463)
T ss_dssp             HSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCT-TTEEEECCC
T ss_pred             cCeeEeccCC-------cCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCc-hhccCCccc
Confidence            4578876654       247999999877664433333322      22233333222222222222221 232233456


Q ss_pred             CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh--------hhCCC--CccceeeecCCCcccChhhHHHHHhcCC
Q 015283          109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--------NDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~--------~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~  178 (410)
                      .+|+.|+..+  +.+.+.|||+|+..++..+++.+.-        ...|.  +...+.+ +.+++.+|++++++...+. 
T Consensus       100 ~SGs~An~av--~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~-d~~~~~IDyd~~~~~a~~~-  175 (463)
T d2a7va1         100 YSGSPANLAV--YTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALTARLF-  175 (463)
T ss_dssp             SSHHHHHHHH--HHHHCCSCEECCC-------------------------------CCB-CTTTCSBCHHHHHHHHHHH-
T ss_pred             cccHHHHHHH--HHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeec-cCCCCcCcHHHHHHHHhhc-
Confidence            8888888887  5666889999999988777764322        11222  3334444 2356779999999998874 


Q ss_pred             CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                       ++.++++..-.+|-     .-+++++.++|++.|.+++.|-++. ++..++..+++  +    +.  .+++.+|.+|+|
T Consensus       176 -kPklIi~G~S~y~r-----~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP--~----~~--aDvvt~tTHKTl  241 (463)
T d2a7va1         176 -RPRLIIAGTSAYAR-----LIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSP--F----KH--ADIVTTTTHKTL  241 (463)
T ss_dssp             -CCSEEEECCSSCCS-----CCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCG--G----GT--CSEEEEESSGGG
T ss_pred             -CCceEEeccccccc-----ccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcCh--h----hh--hhhhhchhhhhh
Confidence             55666765545554     2367788888999999999999973 33333222222  1    12  357788999997


Q ss_pred             cccCCCcceEEEEeCCc--------------hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSS--------------DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM  323 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  323 (410)
                        +|-|-|.+.  ++++              +    +.+.+....++...+.+.....++...    .+.+......+++
T Consensus       242 --rGPrgGiIl--~~~~~~~~~~~~~~~~~~~----~~~~i~~avFPg~qggph~h~iAa~Av----a~~ea~~~~fk~Y  309 (463)
T d2a7va1         242 --RGARSGLIF--YRKGVKAVDPKTGREIPYT----FEDRINFAVFPSLQGGPHNHAIAAVAV----ALKQACTPMFREY  309 (463)
T ss_dssp             --CSCSCEEEE--EECSEEEEETTTEEEEECC----CHHHHHHHHTTTTCCSCCHHHHHHHHH----HHHHHHSHHHHHH
T ss_pred             --cCCCceEEE--EcccccccccccCccchhH----HHHHhhhhcCcccchhhhhhhHHHHHH----HHHHhcCchHHHH
Confidence              588877763  3331              4    333444444443333333333333222    1211123345788


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCcccccCCccee-eecC-----CCHHHHHHhhhcCcEEEc----CC--------C-e
Q 015283          324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTG-----LNKAQSDNMTNKWHVYMT----KD--------G-R  384 (410)
Q Consensus       324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~ll~~~gi~v~----~~--------g-R  384 (410)
                      .++..++.+.|.+.|. +.|+    .+....+-.+ ++++     ++...+++.|++.||.+.    |+        | |
T Consensus       310 a~qVv~NAk~La~~L~-~~G~----~vv~ggTdnHlvlvdl~~~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiR  384 (463)
T d2a7va1         310 SLQVLKNARAMADALL-ERGY----SLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLR  384 (463)
T ss_dssp             HHHHHHHHHHHHHHHH-HTTC----EEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEE
T ss_pred             HHHHHHHHHHHHHHHH-hCCC----eeecCCCCCceeeeeccccCCCHHHHHHHHHhccCccCCccCCCCCCCCCCCceE
Confidence            8999999999999999 8884    4443333333 4443     367788889998999874    22        3 8


Q ss_pred             EEec-----CCCcccHHHHHHHHHHHhh
Q 015283          385 ISLA-----GLSLAKCEYLADAIIDSYH  407 (410)
Q Consensus       385 is~~-----~~~~~~i~~~~~~l~~~l~  407 (410)
                      |..+     ++.++++.++.+.|.+++.
T Consensus       385 iGT~a~TtrG~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         385 LGAPALTSRQFREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             EESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             eCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            8633     4688999999999988774

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.66  E-value=4.3e-15  Score=136.28  Aligned_cols=216  Identities=19%  Similarity=0.176  Sum_probs=146.2

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      ......|.+.+++...+        +..++  +++|+.|+..+  ++..+.+||+|+++...|++....++    ..|.+
T Consensus        58 nPT~~~LE~~la~LEg~--------~~a~~--~~SGmaAi~~~--l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~  125 (392)
T d1gc0a_          58 NPTLNLLEARMASLEGG--------EAGLA--LASGMGAITST--LWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVK  125 (392)
T ss_dssp             CHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCE
T ss_pred             ChHHHHHHHHHHHHhCC--------cceee--hhhHHHHHHHH--HHhhccCCCeeecccccchhhhhhhhhhhccCCcc
Confidence            44567899999999533        23334  69999999988  66668899999999999998766554    45666


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      +..++.       -|++.+++.+++   +++++++-+|.|||..+.   ++++|+++|+++|+++++|..|.....    
T Consensus       126 ~~~~d~-------~d~~~~~~ai~~---~t~lv~~Esp~NP~l~v~---Di~~i~~ia~~~g~~~vvDnT~atP~~----  188 (392)
T d1gc0a_         126 LRHVDM-------ADLQALEAAMTP---ATRVIYFESPANPNMHMA---DIAGVAKIARKHGATVVVDNTYCTPYL----  188 (392)
T ss_dssp             EEEECT-------TCHHHHHHHCCT---TEEEEEEESSCTTTCCCC---CHHHHHHHHGGGTCEEEEECTTTHHHH----
T ss_pred             cccCCc-------cCHHHHHHhCCC---CCeEEEecccccceeeec---chHHHHHHHHhcCCEEEEecCccCccc----
Confidence            666543       378899998875   889999999999999955   566777889999999999999753221    


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH-HHhhccCcccCCChhHHHHHHHHhCCh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ-LKRLARPMYSNPPVHGARIVANVVGNP  310 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~l~~~  310 (410)
                           .+++  ..+-+|++.|.+|.++-.|--+|..  ++.+++.+++++.. .+..   .-...+...+..+.+-|+.-
T Consensus       189 -----~~Pl--~~GaDivihS~TKyi~Ghsd~~~G~--v~~~~~~~~~~r~~~~~~~---~G~~~~p~da~ll~rgl~TL  256 (392)
T d1gc0a_         189 -----QRPL--ELGADLVVHSATKYLSGHGDITAGI--VVGSQALVDRIRLQGLKDM---TGAVLSPHDAALLMRGIKTL  256 (392)
T ss_dssp             -----CCGG--GGTCSEEEEETTTTTTCSSSCCCEE--EEECHHHHHHHHHTHHHHH---TCCCCCHHHHHHHHHHHTTH
T ss_pred             -----cChH--HhCCCEEEEecceeecCCccccccc--ccchhHHHHHHHHHHHHHc---cCCcCChhhHHHHHhccccH
Confidence                 1111  2246789999999996445445554  33366655443221 1211   12244555555566666654


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                                ....++..++...+.+.|+ +.+
T Consensus       257 ----------~lRm~~~~~nA~~lA~~L~-~hp  278 (392)
T d1gc0a_         257 ----------NLRMDRHCANAQVLAEFLA-RQP  278 (392)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHH-TCT
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence                      2334455556677777776 554

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.66  E-value=2.5e-14  Score=131.38  Aligned_cols=216  Identities=10%  Similarity=0.073  Sum_probs=143.6

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      .+....|.+.++++..+        +..++  +++|+.|+..+  ++..+.+||+|+++...|++....++    ..|.+
T Consensus        66 nPt~~~LE~~la~LEgg--------~~a~~--~sSGMaAi~~~--l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~  133 (398)
T d1qgna_          66 NPTTVVLEEKISALEGA--------ESTLL--MASGMCASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGIT  133 (398)
T ss_dssp             CHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred             ChHHHHHHHHHHHHhCC--------ceEEE--ecCcchHHHHH--Hhhcccccccccccccccchhhhhhcccccccccc
Confidence            45567899999998533        33444  69999999987  56668899999999999988766554    45555


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      +..++.       .+.+..++.+..  ++++++++-+|.|||..+.+   +++|+++|+++|+++|+|+.+.....-   
T Consensus       134 ~~~~~~-------~~~~~~~~~~~~--~~t~~v~~EspsNP~l~v~D---i~~ia~ia~~~g~~~vVDnT~atP~~~---  198 (398)
T d1qgna_         134 ATVIDP-------ADVGALELALNQ--KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ---  198 (398)
T ss_dssp             EEEECS-------SCHHHHHHHHHH--SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC---
T ss_pred             cccccc-------cchhhhhhhhcc--ccceEEEccCccccccccch---HHHHHHHHhhcCCEEEecceeeccccC---
Confidence            555542       244545444333  37888888999999999654   667888899999999999998643321   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA  311 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~  311 (410)
                       .  ++     ..+-+|++.|.+|.++-.|--+|..  ++.+++.+++++....    ......+......+.+-|+.- 
T Consensus       199 -~--Pl-----~~GaDiVihS~TKy~~Ghsdv~~G~--v~~~~~~~~~~~~~~~----~~G~~l~p~~a~ll~rgl~TL-  263 (398)
T d1qgna_         199 -K--AL-----ALGADLVLHSATKFLGGHNDVLAGC--ISGPLKLVSEIRNLHH----ILGGALNPNAAYLIIRGMKTL-  263 (398)
T ss_dssp             -C--TT-----TTTCSEEEECTTTTTTCSSSCCCEE--EEECHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHGGGH-
T ss_pred             -C--ch-----hhCCCEEEEechhhcCcccceeehh--hcchhhhhhhhhhhcc----cCCCcCCHHHHHHHHhcchHH-
Confidence             1  11     2235789999999997555545554  4457776666555433    122244555555555555543 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                               ....++..++...+.+.|+ +.+
T Consensus       264 ---------~lRm~~~~~nA~~lA~~L~-~hp  285 (398)
T d1qgna_         264 ---------HLRVQQQNSTALRMAEILE-AHP  285 (398)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHH-TCT
T ss_pred             ---------HHHHHHHHHHHHHHHHHHH-hCC
Confidence                     2334555556677777776 554

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.64  E-value=3e-15  Score=139.91  Aligned_cols=320  Identities=11%  Similarity=0.074  Sum_probs=182.6

Q ss_pred             CcccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283           49 LQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      |+..++++|++|+....    .+++..  ..-+.+.|+.+++++....     .+-|++  +.|||++++.+  +.+.+.
T Consensus        24 GP~~~~~~V~~Am~~~~----~~hr~~ef~~i~~~~r~~L~~ll~~~~-----~~~i~~--~gsgT~a~ea~--~~~l~~   90 (388)
T d2ch1a1          24 GPSNCSKRVLTAMTNTV----LSNFHAELFRTMDEVKDGLRYIFQTEN-----RATMCV--SGSAHAGMEAM--LSNLLE   90 (388)
T ss_dssp             SSCCCCHHHHHHTTSCC----CCTTCHHHHHHHHHHHHHHHHHHTCCC-----SCEEEE--SSCHHHHHHHH--HHHHCC
T ss_pred             CCCCCCHHHHHHhCcCC----CCCCCHHHHHHHHHHHHHHHHHhCCCC-----CeEEEE--cCcHHHHHHHH--HHHhcc
Confidence            55557899998865432    133322  2345688888888875431     344656  78899999988  455577


Q ss_pred             CCCEEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283          127 PGAKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK  204 (410)
Q Consensus       127 ~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~  204 (410)
                      +|++|++...++.+..  ...+.++...+.+..  .+....+.+..+.....  .++.++.+++.+|.||...+.+   +
T Consensus        91 ~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~t~tG~~~~~~---~  163 (388)
T d2ch1a1          91 EGDRVLIAVNGIWAERAVEMSERYGADVRTIEG--PPDRPFSLETLARAIEL--HQPKCLFLTHGDSSSGLLQPLE---G  163 (388)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC--CTTSCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECCCT---T
T ss_pred             ccccccccccccccccchhhhhhhccccccccc--ccccccchhhhhhhhcc--CCcceeeeeecccccccccchh---h
Confidence            9999998876665443  345567777766665  34445666767666544  2455666677899999966655   5


Q ss_pred             HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHH
Q 015283          205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQ  283 (410)
Q Consensus       205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~  283 (410)
                      +.++|+++|.++++|.+ +.++..+.+.+         ..+.++++.|-.|.+ +++|  +|.+++   ++...+.....
T Consensus       164 i~~~~~~~~~~~~vD~~-ss~g~~pid~~---------~~~~d~~~~s~~K~~~gp~G--~g~~~~---~~~~~~~~~~~  228 (388)
T d2ch1a1         164 VGQICHQHDCLLIVDAV-ASLCGVPFYMD---------KWEIDAVYTGAQKVLGAPPG--ITPISI---SPKALDVIRNR  228 (388)
T ss_dssp             HHHHHHHTTCEEEEECT-TTBTTBCCCTT---------TTTCCEEECCCC-CCCCCSS--CEEEEE---CHHHHHHHHTC
T ss_pred             hcchhccccceeeeeee-ecccccccchh---------ccCceEEEEccccccCCCCe--EEEEec---cHHHHHhhhcc
Confidence            55568999999999999 44443223322         224567777888876 4444  466544   66644433211


Q ss_pred             H--------------Hh--h--ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283          284 L--------------KR--L--ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS  344 (410)
Q Consensus       284 ~--------------~~--~--~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~  344 (410)
                      .              ..  .  ....+. .++......+...++...     .....+...+.+.........+. ..+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~  302 (388)
T d2ch1a1         229 RTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIA-----EEGLENQIKRRIECAQILYEGLG-KMGL  302 (388)
T ss_dssp             SSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHH-----HHCHHHHHHHHHHHHHHHHHHHH-HHTC
T ss_pred             cCccccccccchhhhhhhcccccccccCccchHHHHHHHHHHHHHHH-----HhhhHHHHHHHHHHHHHHHhhhh-hccc
Confidence            0              00  0  011122 233332222222222110     11122333334444444444444 4432


Q ss_pred             CCCc-ccccCCcce--eeec-CCCH-HHHHHhhhcCcEEEcCCC--------eEE-ecCC-CcccHHHHHHHHHHHhhhc
Q 015283          345 GKDW-SFILRQIGM--FSFT-GLNK-AQSDNMTNKWHVYMTKDG--------RIS-LAGL-SLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       345 ~~~~-~~~~~~~~~--~~~~-~~~~-~~~~~ll~~~gi~v~~~g--------Ris-~~~~-~~~~i~~~~~~l~~~l~~~  409 (410)
                      .... .......+.  |.+. +++. ++...|++++||.+.+|.        ||+ ++.. ++|+|+.+++.|+++|+.+
T Consensus       303 ~~~~~~~~~rs~~v~~~~~p~g~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~  382 (388)
T d2ch1a1         303 DIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKAT  382 (388)
T ss_dssp             CBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHhCCeEEEEECCCCCCHHHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHhh
Confidence            1100 001111111  2232 4555 456777777899998762        999 6543 6799999999999999874

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=4.4e-15  Score=140.59  Aligned_cols=346  Identities=14%  Similarity=0.032  Sum_probs=210.5

Q ss_pred             eeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC---ceEEEecCChhh
Q 015283           37 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ---RVATVQGLSGTG  113 (410)
Q Consensus        37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~---~i~~~~t~ggt~  113 (410)
                      +||....      +.+++|.+.+.+.+.++.+. ..+.......++...+.+++.+.+|.+....   --.+  |+|||+
T Consensus        56 ~n~asf~------~t~~~~~~~~l~~~~~~~N~-~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~--t~GgSe  126 (450)
T d1pmma_          56 QNLATFC------QTWDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN--TIGSSE  126 (450)
T ss_dssp             GBCSCCS------CCCCCHHHHHHHHHTTTCBT-TCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEE--ESSHHH
T ss_pred             ccccccc------cCCCCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCee--eCchHH
Confidence            4666443      34567888888888876653 3333333456777777777766666532111   1245  899999


Q ss_pred             HHHHHHHHHHH-h--------CCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283          114 SLRLAAALIER-Y--------FPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI  183 (410)
Q Consensus       114 a~~~~~~~~~~-~--------~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~  183 (410)
                      |+.++....+. +        .++ ..++++...+.++...++..|.+++.++.. ++++.+|++.+++.+++   .+++
T Consensus       127 A~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~-~~~~~~d~~~L~~~i~~---~t~~  202 (450)
T d1pmma_         127 ACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMR-PGQLFMDPKRMIEACDE---NTIG  202 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCB-TTBCSCCHHHHHHHCCT---TEEE
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeec-CCCCcCcHHHHHHHhhh---CceE
Confidence            99987543332 1        122 457778888989999999999999999874 45689999999999986   7888


Q ss_pred             EEeCCCCCCCCCCCCHHHHHHHHH---HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283          184 LLHGCAHNPTGIDPTPEQWEKIAD---VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY  260 (410)
Q Consensus       184 ii~~~p~NPtG~~~~~~~l~~i~~---~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  260 (410)
                      ++.+.++|.||.+=+.+++.++++   .|+++|+++.+|.||.++... ...+...  ........+.+..|.+|.++. 
T Consensus       203 Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p-~~~~~~~--~~~~~~~aDSi~~s~HK~~~~-  278 (450)
T d1pmma_         203 VVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAP-FVAPDIV--WDFRLPRVKSISASGHKFGLA-  278 (450)
T ss_dssp             EECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHH-HHCTTCC--CSTTSTTEEEEEEETTTTTCC-
T ss_pred             EEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceee-eechhhh--hhhcccceeEeecChhhccCC-
Confidence            888889999999888887666654   467899999999998765420 0000000  001122366778899998753 


Q ss_pred             CCCcceEEEEeCCchhHHHHHHH----HHhhccCcccCCChh-HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283          261 AERIGAMNVVCSSSDLAARVKSQ----LKRLARPMYSNPPVH-GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF  335 (410)
Q Consensus       261 G~r~G~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  335 (410)
                      ...+||+.  .++++........    +.......+...+.- .+.+....    .+...-.+.++++.++..++.+++.
T Consensus       279 p~g~g~l~--~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~----~l~~~G~~G~~~~~~~~~~la~~l~  352 (450)
T d1pmma_         279 PLGCGWVI--WRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYY----EFLRLGREGYTKVQNASYQVAAYLA  352 (450)
T ss_dssp             CSSCEEEE--ESSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeEEE--ecChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHH----HHhhhhHHHHHHHHHHHHHHHHHHH
Confidence            35579984  4555421110000    000000011111111 11111111    1111124556788888999999999


Q ss_pred             HHhhhccCCCCCcccccC---C--cceeee--c-----CCCHHHHHHhhhcCcEEE----cCCC-------eEEecC-CC
Q 015283          336 DSLSAKDKSGKDWSFILR---Q--IGMFSF--T-----GLNKAQSDNMTNKWHVYM----TKDG-------RISLAG-LS  391 (410)
Q Consensus       336 ~~l~~~~g~~~~~~~~~~---~--~~~~~~--~-----~~~~~~~~~ll~~~gi~v----~~~g-------Ris~~~-~~  391 (410)
                      +.|+ +.+.   +++..+   .  ...+.|  .     +++...+...|.++|..+    .|..       |+.+.. .|
T Consensus       353 ~~L~-~~~~---~el~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L~~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t  428 (450)
T d1pmma_         353 DEIA-KLGP---YEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFE  428 (450)
T ss_dssp             HHHH-TTSC---EEEEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCC
T ss_pred             HHHH-hCCC---eEEEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHHHHcCCeeeccCcCCCcCCcEEEEEEccCCCC
Confidence            9998 7762   333321   1  112222  2     234444444445568654    2321       887654 48


Q ss_pred             cccHHHHHHHHHHHhhhc
Q 015283          392 LAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       392 ~~~i~~~~~~l~~~l~~~  409 (410)
                      +++++++++.|+++++.+
T Consensus       429 ~e~~d~lv~dl~~~v~~l  446 (450)
T d1pmma_         429 MDFAELLLEDYKASLKYL  446 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            889999999999998764

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=2.6e-14  Score=130.88  Aligned_cols=216  Identities=13%  Similarity=0.079  Sum_probs=145.1

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      .+....|.+.++++-.+        +..++  +++|+.|+..+  ++..+.+||.|+++...|.+....+.    ..|..
T Consensus        49 nPt~~~le~~la~LEgg--------~~a~~--~sSGMaAi~~~--l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~  116 (384)
T d1cs1a_          49 NPTRDVVQRALAELEGG--------AGAVL--TNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYR  116 (384)
T ss_dssp             CHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCE
T ss_pred             CHHHHHHHHHHHHHhCC--------CceEE--ecChHHHHHHH--Hhhcccccceecccccccchhhhhhhhhhcccccc
Confidence            45667899999998533        23334  69999999988  56668899999999999987755544    34444


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD  231 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~  231 (410)
                      +..+..       .|.+.+++.+.+   +++++++-+|.|||..+.+   +++|+++|+++|+++|+|+.|.....-   
T Consensus       117 ~~~~d~-------~d~~~~~~~~~~---~t~~v~~EspsNP~l~v~D---i~~i~~ia~~~g~~~vVDNT~atP~~~---  180 (384)
T d1cs1a_         117 VLFVDQ-------GDEQALRAALAE---KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ---  180 (384)
T ss_dssp             EEEECT-------TCHHHHHHHHHT---CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC---
T ss_pred             cccccC-------CCHHHHHhhccc---cccEEEEeccccccceecc---HHHHhhhhhhcCcEEEEeccccCcccc---
Confidence            444432       377888888886   7778888999999999664   567777799999999999998543321   


Q ss_pred             CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283          232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA  311 (410)
Q Consensus       232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~  311 (410)
                       .  ++     ..+-+|++.|.+|.++-.|--+|.++ +.++++..+++.....    ......+...+..+.+-|+.-.
T Consensus       181 -~--Pl-----~~GaDiVvhS~TKyi~Ghsdv~~G~v-v~~~~~~~~~~~~~~~----~~G~~~~p~~a~ll~rgL~TL~  247 (384)
T d1cs1a_         181 -N--PL-----ALGADLVLHSCTKYLNGHSDVVAGVV-IAKDPDVVTELAWWAN----NIGVTGGAFDSYLLLRGLRTLV  247 (384)
T ss_dssp             -C--GG-----GGTCSEEEEETTTTTTCSSCCCCEEE-EESSHHHHHHHHHHHH----HHTCBCCHHHHHHHHHHHTTHH
T ss_pred             -c--cc-----ccCCCEEEEccccccccCCCcccccc-cCCchhhhhhhhhhhh----hhhhccccccHHHHhhccchhH
Confidence             1  11     12367899999999965555455542 4556665555444322    1222445555555666666543


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                                -..++..++...+.+.|+ ..+
T Consensus       248 ----------lRm~~~~~nA~~lA~~L~-~hp  268 (384)
T d1cs1a_         248 ----------PRMELAQRNAQAIVKYLQ-TQP  268 (384)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHT-TCT
T ss_pred             ----------HHHHHHHHHHHHHHHhcc-cCC
Confidence                      333445556777777777 654

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.63  E-value=2.5e-14  Score=133.82  Aligned_cols=335  Identities=12%  Similarity=0.043  Sum_probs=177.9

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT  112 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt  112 (410)
                      ...||+..|.--...|+.  +|.+.+++.+++.. .+............+.+.+.+. ..       .+.+.+  +.+|+
T Consensus        39 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~v~~--~~sgs  106 (404)
T d1z7da1          39 KRYYDFLSAYSSVNQGHC--HPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNL-LG-------YDKVLM--MNTGA  106 (404)
T ss_dssp             CEEEESSHHHHTTTTCBT--CHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHH-HT-------CSEEEE--ESSHH
T ss_pred             CEEEEccccHHHHhhhcC--cHHHHHHHHHHHHhCCCcccccchHHHHHHHHhhhhc-cc-------cceeee--ecccc
Confidence            467898887553345554  58999999888755 2211111111222333333333 22       356777  89999


Q ss_pred             hHHHHHHHHHHHhC--------CCCEEEEcCCCCcchhhhhhhC-CC---CccceeeecC--CCcccChhhHHHHHhcCC
Q 015283          113 GSLRLAAALIERYF--------PGAKVLISSPTWGNHKNIFNDA-RV---PWSEYRYYDP--KTVGLDFEGMIADIKAAP  178 (410)
Q Consensus       113 ~a~~~~~~~~~~~~--------~gd~Vl~~~p~y~~~~~~~~~~-g~---~~~~v~~~~~--~~~~~d~~~l~~~i~~~~  178 (410)
                      ++.+.+.++.+...        ...+++....+|.......... +.   +....|..+.  ....-+.+.++..+..  
T Consensus       107 ~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--  184 (404)
T d1z7da1         107 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKD--  184 (404)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTS--
T ss_pred             chHHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccccchHHHHHHHhcC--
Confidence            99999877665431        1236777666665443222111 10   0001111000  0001245666665543  


Q ss_pred             CCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283          179 GGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL  257 (410)
Q Consensus       179 ~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  257 (410)
                      +...++++-..+...|...+ ++-+++|.++|++||+++|.||++.+|+-.   ...+....+ +..++++   +++|.+
T Consensus       185 ~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRt---G~~~~~e~~-gv~PDiv---t~gK~l  257 (404)
T d1z7da1         185 PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRT---GKLLCVHHY-NVKPDVI---LLGKAL  257 (404)
T ss_dssp             TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT---SSSSGGGGG-TCCCSEE---EECGGG
T ss_pred             CCEEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcc---ccccccccc-CCCCCEE---EEcccc
Confidence            35566665555666777654 445999999999999999999999888632   233343332 3334555   789999


Q ss_pred             cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283          258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKL  334 (410)
Q Consensus       258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l  334 (410)
                      +-.+..+|.+++   ++++.+    .+.......+.+.+.++..++...|+   +..+       .++..+.-....+.+
T Consensus       258 ~gG~~p~~~v~~---~~~i~~----~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~-------~~~~~~~~~~~~~~l  323 (404)
T d1z7da1         258 SGGHYPISAVLA---NDDIML----VIKPGEHGSTYGGNPLAASICVEALNVLINEKL-------CENAEKLGGPFLENL  323 (404)
T ss_dssp             GTTSSCCEEEEE---CHHHHT----TCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTH-------HHHHHHHHHHHHHHH
T ss_pred             cCCCCCcccccc---hHHHHc----cCCCCCcCcCCCCCcchhhhhhhhhhhhhcchh-------hhhhccchhHHHHHH
Confidence            844478888755   777333    23322222223344555455543333   2211       122222233333444


Q ss_pred             HHHhhhccCCCCCcccccCCcceeeecC-----CC-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHH
Q 015283          335 FDSLSAKDKSGKDWSFILRQIGMFSFTG-----LN-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAII  403 (410)
Q Consensus       335 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~  403 (410)
                      .+.++ +.+.   +..+... |.+..+.     .. .+...++++ +|+++.+.+    ||+.+ .+|++++++++++|+
T Consensus       324 ~~~~~-~~~~---v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~l~~-~Gl~~~~~~~~~ir~~Ppl~it~~~id~~~~~l~  397 (404)
T d1z7da1         324 KRELK-DSKI---VRDVRGK-GLLCAIEFKNELVNVLDICLKLKE-NGLITRDVHDKTIRLTPPLCITKEQLDECTEIIV  397 (404)
T ss_dssp             HHHHT-TCTT---EEEEEEE-TTEEEEEECTTTCCHHHHHHHHHH-TTEECCEETTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHh-cCCC---eEEEEee-CcEEEEEEcCCcccHHHHHHHHHh-CCeEEecCCCCEEEEECCcCCCHHHHHHHHHHHH
Confidence            44444 4432   1122222 3332221     12 234566666 699998765    66533 249999999999999


Q ss_pred             HHhhhc
Q 015283          404 DSYHNV  409 (410)
Q Consensus       404 ~~l~~~  409 (410)
                      ++++++
T Consensus       398 ~alk~~  403 (404)
T d1z7da1         398 KTVKFF  403 (404)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            999875

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.63  E-value=8.5e-15  Score=138.41  Aligned_cols=340  Identities=12%  Similarity=0.046  Sum_probs=180.5

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-C-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG  111 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg  111 (410)
                      ...||+..|.--...|+.  +|.+.+++.++++... . ..+ +.....++.+.+++.....      .+.+.+  +.+|
T Consensus        41 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~------~~~v~f--~~sG  109 (431)
T d1zoda1          41 RAILDFTSGQMSAVLGHC--HPEIVSVIGEYAGKLDHLFSEM-LSRPVVDLATRLANITPPG------LDRALL--LSTG  109 (431)
T ss_dssp             CEEEETTHHHHTCTTCBT--CHHHHHHHHHHHHHCCCCCTTC-CCHHHHHHHHHHHHHSCTT------CCEEEE--ESCH
T ss_pred             CEEEEcccCHHhhhhcCC--CHHHHHHHHHHHhhcccccccc-ccHHHHHHHHHHHHhCCcc------cceeee--cccc
Confidence            568899877542355664  5999999988875522 1 122 2223344555555543221      468888  9999


Q ss_pred             hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC------------CccceeeecC-------CCccc---Chhh
Q 015283          112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV------------PWSEYRYYDP-------KTVGL---DFEG  169 (410)
Q Consensus       112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~~-------~~~~~---d~~~  169 (410)
                      ++|++.+.++.+.+...++|+...-+|.+........+.            ....++....       .....   +++.
T Consensus       110 seA~e~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (431)
T d1zoda1         110 AESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDY  189 (431)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHH
T ss_pred             cchHHHHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHH
Confidence            999999999888777668888888877665432221110            0111111000       00001   2233


Q ss_pred             HHHHHhc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283          170 MIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL  247 (410)
Q Consensus       170 l~~~i~~-~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  247 (410)
                      +...+.. .++...++++...+.-.|.. +|++-+++|.++|++||+++|.||++.+|+-.   ...+.... .+-.+++
T Consensus       190 ~~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRt---G~~~~~~~-~gv~PDi  265 (431)
T d1zoda1         190 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRT---GTMFACQR-DGVTPDI  265 (431)
T ss_dssp             HHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT---SSSSTHHH-HTCCCSE
T ss_pred             HHHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEecccccccccc---cccccccc-CCCCcch
Confidence            3333322 23345555544444445554 56666999999999999999999999987632   12222222 2333455


Q ss_pred             EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH---hCChhhHHHHHHHHHHHH
Q 015283          248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEMMA  324 (410)
Q Consensus       248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~~~~~~  324 (410)
                      +   .++|.++ .|+.++.+++   .++..+.+...  ......+.....++..++...   +.++.+    .+...+..
T Consensus       266 ~---~~gK~l~-gG~p~~av~~---~~~~~~~~~~~--~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~----~~~~~~~g  332 (431)
T d1zoda1         266 L---TLSKTLG-AGLPLAAIVT---SAAIEERAHEL--GYLFYTTHVSDPLPAAVGLRVLDVVQRDGL----VARANVMG  332 (431)
T ss_dssp             E---EECHHHH-TTSSCEEEEE---CHHHHHHHHHT--TCCCCCTTTTCHHHHHHHHHHHHHHHHTTH----HHHHHHHH
T ss_pred             h---ccccccc-cccccceeee---eecchhhhhcc--cccccCCCCCCcchHHHHHHHHHHhhhhhh----hHHHHHHH
Confidence            5   5799998 6888888654   55543333221  111112223444443443322   222222    12222222


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCcccccCCcceee--ec----------CCCHHHHHHhhhcCcEE----EcCC-C---e
Q 015283          325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS--FT----------GLNKAQSDNMTNKWHVY----MTKD-G---R  384 (410)
Q Consensus       325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~ll~~~gi~----v~~~-g---R  384 (410)
                      +++.   +.+.+.+. +.+.   +......+.++.  +.          .+...+...+++ .|+.    ..++ +   |
T Consensus       333 ~~l~---~~l~~~~~-~~~~---i~~vrG~Glm~~ie~~~~~~~~~~~~~~~~~i~~~~~~-~Gl~~~~~~~~~~~~~i~  404 (431)
T d1zoda1         333 DRLR---RGLLDLME-RFDC---IGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMN-LGLSMNIVQLPGMGGVFR  404 (431)
T ss_dssp             HHHH---HHHHHHHH-HCTT---EEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHHH-TTEECCEECCTTSCCEEE
T ss_pred             HHHh---hhhhhhhh-cCCC---eEEEeecceEEEEEEecCCcccCccHHHHHHHHHHHHH-hCcccCeeeecCCCCEEE
Confidence            2222   22223233 3331   111222222221  11          001334556665 5764    2333 3   5


Q ss_pred             EEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          385 ISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       385 is~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ++.+ ..|++++++++++|.+++++.
T Consensus       405 l~Ppl~it~~eid~~~~~l~~al~~v  430 (431)
T d1zoda1         405 IAPPLTVSEDEIDLGLSLLGQAIERA  430 (431)
T ss_dssp             ECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            6543 258999999999999999874

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=5.8e-14  Score=129.08  Aligned_cols=216  Identities=11%  Similarity=0.023  Sum_probs=143.3

Q ss_pred             CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCC
Q 015283           75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV  150 (410)
Q Consensus        75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~  150 (410)
                      ..+....|.+.++++-..        +..+.  +++|+.|+..+  ++..+.+||+|++....|++....++    ..|.
T Consensus        56 ~nPt~~~le~~la~LEg~--------~~a~~--~~SGMaAi~~~--l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi  123 (391)
T d1cl1a_          56 GTLTHFSLQQAMCELEGG--------AGCVL--FPCGAAAVANS--ILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGV  123 (391)
T ss_dssp             CCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred             CChhHHHHHHHHHHHhCC--------ccEEE--eccccceeeeh--hhcccCCCCeEEEecccccchhhhhhhccccccc
Confidence            345567888888888422        33444  69999999988  56668899999999999998766655    4555


Q ss_pred             CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCC
Q 015283          151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASG  228 (410)
Q Consensus       151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~  228 (410)
                      ++..++.       .|.+.+++.+++   +++++++-+|.|||..+.+.   ++++++|++  +|+++|+|+.+.....-
T Consensus       124 ~~~~~d~-------~d~~~~~~~i~~---~t~~i~~EtpsNP~l~v~Di---~~i~~~a~~~~~g~~~vVDnT~atP~~~  190 (391)
T d1cl1a_         124 TTSWFDP-------LIGADIVKHLQP---NTKIVFLESPGSITMEVHDV---PAIVAAVRSVVPDAIIMIDNTWAAGVLF  190 (391)
T ss_dssp             EEEEECT-------TCGGGGGGTCCT---TEEEEEEESSCTTTCCCCCH---HHHHHHHHHHCTTCEEEEECTTTTTTSS
T ss_pred             ccccccC-------cccccccccccc---ccceeeecccCccccccccc---HHHHHHHHhccCCcEEEEeccccchhhh
Confidence            5555432       266777777764   78889999999999997765   566666765  59999999998654431


Q ss_pred             CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283          229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG  308 (410)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~  308 (410)
                          .  ++     ....+|++.|.+|.++-.|--+|.+  ++.+++..+++.....    ......+...+..+.+-|+
T Consensus       191 ----~--Pl-----~~GaDivvhS~TKy~~GhsdvlgG~--vv~~~~~~~~~~~~~~----~~G~~~~p~~a~ll~rgl~  253 (391)
T d1cl1a_         191 ----K--AL-----DFGIDVSIQAATKYLVGHSDAMIGT--AVCNARCWEQLRENAY----LMGQMVDADTAYITSRGLR  253 (391)
T ss_dssp             ----C--GG-----GGTCSEEEEETTTTTTCSSSCCCEE--EEECTTTHHHHHHHHH----HTTCCCCHHHHHHHHHHHT
T ss_pred             ----c--cc-----ccccceEEeecchhccccccccccc--eeccccccccchhhhh----cccccCCchhhhhhhccch
Confidence                1  11     1235788999999997555445555  2336665555544322    1223444555555555555


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .-.          ...++..++...+.+.|+ +.+
T Consensus       254 TL~----------lR~~~~~~nA~~vA~~L~-~hp  277 (391)
T d1cl1a_         254 TLG----------VRLRQHHESSLKVAEWLA-EHP  277 (391)
T ss_dssp             THH----------HHHHHHHHHHHHHHHHHH-TCT
T ss_pred             hHH----------HHHHHHHHHHHHHHHHHH-hcc
Confidence            542          334455556667777777 654

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.61  E-value=1.3e-14  Score=134.65  Aligned_cols=308  Identities=12%  Similarity=0.041  Sum_probs=184.3

Q ss_pred             ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC--
Q 015283           51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--  128 (410)
Q Consensus        51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g--  128 (410)
                      |.+.++-++++.+.+..+.   |....-+.++.+.+++++...        +.++  +++||.|+.++...+ ...+|  
T Consensus         8 p~~~~~~~~~v~~~l~~~~---~~~G~~v~~fE~~~~~~~g~k--------~ai~--~~Sgt~Al~~al~al-~~~~~~~   73 (371)
T d2fnua1           8 PCLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFLGVK--------HALV--FNSATSALLTLYRNF-SEFSADR   73 (371)
T ss_dssp             CCCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHHTCS--------EEEE--ESCHHHHHHHHHHHS-SCCCTTS
T ss_pred             CCCCHHHHHHHHHHHcCCC---ccCCHHHHHHHHHHHHHHCcC--------eEEE--EecHHHHHHHHHHHh-cccCCCC
Confidence            3445777778888876654   433345789999999997443        4556  799999999983222 12344  


Q ss_pred             CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 015283          129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV  208 (410)
Q Consensus       129 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~  208 (410)
                      |+|++|.-+|......+...|++++.++.. .++ .++.+++++.+.+   ++++++.   .+..|.   ..++.++.++
T Consensus        74 ~eVi~p~~t~~a~~~ai~~~G~~pv~vDi~-~~~-~~~~~~~~~~~~~---~t~avi~---vh~~G~---~~~~~~i~~~  142 (371)
T d2fnua1          74 NEIITTPISFVATANMLLESGYTPVFAGIK-NDG-NIDELALEKLINE---RTKAIVS---VDYAGK---SVEVESVQKL  142 (371)
T ss_dssp             CEEEECSSSCTHHHHHHHHTTCEEEECCBC-TTS-SBCGGGSGGGCCT---TEEEEEE---ECGGGC---CCCHHHHHHH
T ss_pred             CeeecccccccccceeeeccCccccccccc-ccc-cccchhhhhhccc---hhhcccc---cccccc---cccccccccc
Confidence            589999999999999999999999999983 333 4555777766654   6777663   356687   4456677778


Q ss_pred             HHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283          209 IQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA  288 (410)
Q Consensus       209 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~  288 (410)
                      |+++++++|+|.+++....-  ...     .....++..++....+|.++. |- .|.+  ++.++++.++++.......
T Consensus       143 ~~~~~i~lIEDaaqa~Ga~~--~~~-----~~G~~g~~~~~Sf~~~K~l~~-g~-GG~i--~t~~~~~~~~~~~~~~~g~  211 (371)
T d2fnua1         143 CKKHSLSFLSDSSHALGSEY--QNK-----KVGGFALASVFSFHAIKPITT-AE-GGAV--VTNDSELHEKMKLFRSHGM  211 (371)
T ss_dssp             HHHHTCEEEEECTTCTTCEE--TTE-----ETTSSSSEEEEECCTTSSSCC-SS-CEEE--EESCHHHHHHHHHHTBTTE
T ss_pred             ccccchhhccchhhccCcee--ccc-----cCCcccccccccccccccccc-cc-ceEE--Eeechhhhhhccccccccc
Confidence            99999999999995543321  111     112233344444445898864 43 3554  6888887777665332211


Q ss_pred             c------------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc----
Q 015283          289 R------------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL----  352 (410)
Q Consensus       289 ~------------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~----  352 (410)
                      .            .....++.+.+.++...|+.-          .+..++-+++..++.+.|. ....   +....    
T Consensus       212 ~~~~~~~~~~~~~G~n~r~sel~Aaigl~qL~~l----------~~~~~~R~~~~~~y~~~l~-~~~~---~~~~~~~~~  277 (371)
T d2fnua1         212 LKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA----------PFLMQKREEAALTYDRIFK-DNPY---FTPLHPLLK  277 (371)
T ss_dssp             EESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH----------HHHHHHHHHHHHHHHHHHT-TCSS---EEESGGGCS
T ss_pred             ccccccccccccccccccccchhhhhhhhhhhhc----------cchhhhhhhhhhhhccccc-cccc---ccccccccc
Confidence            0            011123343333334444422          2333333344455556666 4431   11111    


Q ss_pred             CCcceeee---cCC----CHHHHHHhhhcCcEEEcCC----------------C----------e-EEe---cCCCcccH
Q 015283          353 RQIGMFSF---TGL----NKAQSDNMTNKWHVYMTKD----------------G----------R-ISL---AGLSLAKC  395 (410)
Q Consensus       353 ~~~~~~~~---~~~----~~~~~~~ll~~~gi~v~~~----------------g----------R-is~---~~~~~~~i  395 (410)
                      ....++.+   +..    ..+.+.+.|++.||.+.+.                +          | +++   ..++++++
T Consensus       278 ~~~~~~~~~i~~~~~~~~~r~~~~~~L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di  357 (371)
T d2fnua1         278 DKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESV  357 (371)
T ss_dssp             SCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHH
T ss_pred             cccccccccccccccchhHHHHHHHHHHHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHH
Confidence            11122211   221    2444544555679987642                1          2 444   34799999


Q ss_pred             HHHHHHHHHHhhh
Q 015283          396 EYLADAIIDSYHN  408 (410)
Q Consensus       396 ~~~~~~l~~~l~~  408 (410)
                      +++++.|++.+++
T Consensus       358 ~~I~~~i~~~~~~  370 (371)
T d2fnua1         358 QNIAHSVLKTFES  370 (371)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999998875

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.61  E-value=3.1e-14  Score=132.25  Aligned_cols=189  Identities=14%  Similarity=-0.020  Sum_probs=122.1

Q ss_pred             HHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH-HhCCCCEEEEcCCC
Q 015283           59 KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-RYFPGAKVLISSPT  137 (410)
Q Consensus        59 ~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~  137 (410)
                      +++.+.++.++...++|  -+.++++.+++++...        ..++  +++||.|+.++.  .+ .+.+||+|++|+-+
T Consensus         5 ~~~~~~l~~~~~~~~G~--~~~~fE~~~~~~~~~~--------~~~~--~~SgT~Al~lal--~~l~~~~gdeVi~p~~t   70 (374)
T d1o69a_           5 KYIEEVFKSNYIAPLGE--FVNRFEQSVKDYSKSE--------NALA--LNSATAALHLAL--RVAGVKQDDIVLASSFT   70 (374)
T ss_dssp             HHHHHHHHHTTTSCTTH--HHHHHHHHHHHHHCCS--------EEEE--ESCHHHHHHHHH--HHTTCCTTCEEEEESSS
T ss_pred             HHHHHHHhcCCcCCCCH--HHHHHHHHHHHHHCcC--------eEEE--eCCHHHHHHHHH--HHcCCCCcCEEEeCCcc
Confidence            44555555554233332  3779999999997443        4556  799999999983  33 25689999999999


Q ss_pred             CcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283          138 WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF  217 (410)
Q Consensus       138 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li  217 (410)
                      |......+...|++++.+++. ++....+.+..+..... .+++.+++   +.+..|.   ..++.++.++|+++|++||
T Consensus        71 ~~a~~~~~~~~g~~pv~~Di~-~~~~~~~~~~~~~~~~~-~~~~~aii---~~~~~G~---~~d~~~i~~~~~~~~i~vI  142 (374)
T d1o69a_          71 FIASVAPICYLKAKPVFIDCD-ETYNIDVDLLKLAIKEC-EKKPKALI---LTHLYGN---AAKMDEIVEICKENDIVLI  142 (374)
T ss_dssp             CGGGTHHHHHTTCEEEEECBC-TTSSBCHHHHHHHHHHC-SSCCCEEE---EECGGGC---CCCHHHHHHHHHHTTCEEE
T ss_pred             hHhhHHHHhhccceeEecccc-cccccccccccccchhc-cccccccc---ccccccc---hhhhHHHHHHhhccCcchh
Confidence            999999999999999999884 33333343333322221 23455555   2366677   4467778888999999999


Q ss_pred             ccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHH
Q 015283          218 FDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKS  282 (410)
Q Consensus       218 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~  282 (410)
                      +|.|++. +.. ....     .....+  ++.+.||  +|.++..|  .|.+  ++.+++++++++.
T Consensus       143 ED~a~a~-g~~-~~~~-----~~G~~g--d~~~fSf~~~K~l~tge--GG~i--~tnn~~~~~~~~~  196 (374)
T d1o69a_         143 EDAAEAL-GSF-YKNK-----ALGTFG--EFGVYSYNGNKIITTSG--GGML--IGKNKEKIEKARF  196 (374)
T ss_dssp             EECTTCT-TCE-ETTE-----ETTSSS--SEEEEECCTTSSSCCSS--CEEE--EESCHHHHHHHHH
T ss_pred             hhhhhhh-cce-ECCe-----ecCCCC--ceEEEeccCcccccccc--ceee--hhhhHHHHHhhcc
Confidence            9999544 321 1111     111222  4444555  68886433  3555  6788887766554

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=2.3e-14  Score=137.19  Aligned_cols=305  Identities=10%  Similarity=0.006  Sum_probs=175.6

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC---------EEEEcCCCCcch
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA---------KVLISSPTWGNH  141 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd---------~Vl~~~p~y~~~  141 (410)
                      ..|....+..+|++.+++++..        +.+++  +++|+.|+.+++..+  +.+||         .+......|...
T Consensus        68 ~~Y~~~~~~~~le~~~a~l~G~--------~~~~~--~~sGt~A~~~a~~~~--~~~g~~~~~~~~~~~i~~~~~~~~~~  135 (467)
T d2v1pa1          68 EAFSGSRSYYALAESVKNIFGY--------QYTIP--THQGRGAEQIYIPVL--IKKREQEKGLDRSKMVAFSNYFFDTT  135 (467)
T ss_dssp             CCSSSCHHHHHHHHHHHHHTCC--------SEEEE--ECSSTTTHHHHHHHH--HHHHHHHHCCCTTTCEEEESSCCHHH
T ss_pred             hhhcCCchHHHHHHHHHHHHCC--------CEEEE--CCCCHHHHHHHHHHH--hhccceEecCCCCcEEEEeccccccc
Confidence            5688778889999999999632        45667  899999999985544  33343         455555556666


Q ss_pred             hhhhhhCCCCccceeeecC--------CCcccChhhHHHHHhcCC-CCcEEEEeCCCCCC-CCCCCCHHHHHHHHHHHHH
Q 015283          142 KNIFNDARVPWSEYRYYDP--------KTVGLDFEGMIADIKAAP-GGSFILLHGCAHNP-TGIDPTPEQWEKIADVIQE  211 (410)
Q Consensus       142 ~~~~~~~g~~~~~v~~~~~--------~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NP-tG~~~~~~~l~~i~~~~~~  211 (410)
                      .......|..++.++....        ....+|++++++.+.+.. ..+.++++.+.+|. .|.+++.+++++|.++|++
T Consensus       136 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~  215 (467)
T d2v1pa1         136 QGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKK  215 (467)
T ss_dssp             HHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHH
Confidence            6667778888776655321        235689999999987632 33455555556555 4788899999999999999


Q ss_pred             cCCcccccccCCCC----------CCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283          212 KNHIPFFDVAYQGF----------ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK  281 (410)
Q Consensus       212 ~~~~li~Deay~~~----------~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~  281 (410)
                      ||+++++|+++...          .+.  +.....+..... ....++..|.+|.++.  ...|++  .+.++.+.....
T Consensus       216 ~g~~l~~D~a~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~-~~~d~~s~s~~K~~~~--~~gg~i--~~~~~~~~~~~~  288 (467)
T d2v1pa1         216 YDIPVVMDSARFAENAYFIKQREAEYK--DWTIEQITRETY-KYADMLAMSAKKDAMV--PMGGLL--CMKDDSFFDVYT  288 (467)
T ss_dssp             TTCCEEEECTTHHHHHHHHHHHCGGGT--TSCHHHHHHHHG-GGCSEEEEESSSTTCC--SSCEEE--EECSGGGHHHHH
T ss_pred             cCCEEEEechhhhcccccccccccccc--CCcccccchhhc-ccCCEEEecCCCCCCC--CCceeE--EecchhhhhHHH
Confidence            99999999995421          111  011111111111 1244556678887753  334554  344444333322


Q ss_pred             HHHHhh----ccCcc-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCc-
Q 015283          282 SQLKRL----ARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI-  355 (410)
Q Consensus       282 ~~~~~~----~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~-  355 (410)
                      . ....    ..... .+.......++...+....        ..+..++..++.+++.+.|+ +.+.    .+.+... 
T Consensus       289 ~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~~~~~~~~~~l~~~L~-~~~~----~v~~~~~~  354 (467)
T d2v1pa1         289 E-CRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM--------NLDWLAYRIAQVQYLVDGLE-EIGV----VCQQAGGH  354 (467)
T ss_dssp             H-HHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHH-HTTC----CEEEECSS
T ss_pred             h-hcccccccccCcchhhhHHHHHHHHHHHhHHhh--------hHHHHHHHHHHHHHHHHHHH-hcCC----cccCCCcc
Confidence            2 2211    11111 1222222222222221110        02333444567777888887 7662    2222111 


Q ss_pred             ceee-----ecCC------CHHHHHHhhhcCcEEEcCC-----------------C----eEEecC--CCcccHHHHHHH
Q 015283          356 GMFS-----FTGL------NKAQSDNMTNKWHVYMTKD-----------------G----RISLAG--LSLAKCEYLADA  401 (410)
Q Consensus       356 ~~~~-----~~~~------~~~~~~~ll~~~gi~v~~~-----------------g----Ris~~~--~~~~~i~~~~~~  401 (410)
                      ..+.     ....      ......+++.+.||.....                 .    |++++.  .|++++|++++.
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~  434 (467)
T d2v1pa1         355 AAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEA  434 (467)
T ss_dssp             CEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHH
T ss_pred             ceeecchhhcCCcchhhhhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHH
Confidence            1111     1111      1234556666778754211                 1    887653  488999999999


Q ss_pred             HHHHhhh
Q 015283          402 IIDSYHN  408 (410)
Q Consensus       402 l~~~l~~  408 (410)
                      |++++++
T Consensus       435 l~~v~~~  441 (467)
T d2v1pa1         435 FKHVKEN  441 (467)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
Confidence            9999864

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.58  E-value=1.2e-14  Score=138.86  Aligned_cols=179  Identities=15%  Similarity=0.006  Sum_probs=100.3

Q ss_pred             ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh-HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-
Q 015283           71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG-SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-  148 (410)
Q Consensus        71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~-a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-  148 (410)
                      ..+.|..-+.++++.+|+++..        ++.++  +.+||. ++.++  +...+.|||+|+++.-+|.+....+... 
T Consensus        60 ~l~~~~~~i~eae~~~A~~~ga--------~~a~f--~~~Gtt~~n~a~--i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~  127 (462)
T d1c4ka2          60 DLLIHEGPAVAAEKHAARVYNA--------DKTYF--VLGGSSNANNTV--TSALVSNGDLVLFDRNNHKSVYNSALAMA  127 (462)
T ss_dssp             BTTTTBTHHHHHHHHHHHHTTC--------SEEEE--ESSHHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHTTTT
T ss_pred             CccCCCHHHHHHHHHHHHHhCC--------CeEEE--ECCchHHHHHHH--HHHhcCCCCeEEecccchHHHHHHHHHHh
Confidence            3354555568899999999632        44555  555554 44444  4556789999999999998876644433 


Q ss_pred             CCCcc--ceeeecCCC--cc-----cChhhHHHHHhc------CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015283          149 RVPWS--EYRYYDPKT--VG-----LDFEGMIADIKA------APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN  213 (410)
Q Consensus       149 g~~~~--~v~~~~~~~--~~-----~d~~~l~~~i~~------~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~  213 (410)
                      +..+.  ..+.. +.+  ..     ++.+.+...+.+      ...++..+++...+|-+|.   ..++++|+++|+++|
T Consensus       128 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~---~~dl~~I~~ia~~~g  203 (462)
T d1c4ka2         128 GGRPVYLQTNRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGT---IYNAHEVVKRIGHLC  203 (462)
T ss_dssp             CCEEEEECEEEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSE---EECHHHHHHHHGGGB
T ss_pred             cCCceeeecccc-cccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccc---hhhHHHHHHHHHHcC
Confidence            33333  33331 111  11     222222222111      0112322222334567888   556778888899999


Q ss_pred             CcccccccCCCCCCCCCCCchhHhHHHh----hcCCcEEEEecccccccccCCCcceEE
Q 015283          214 HIPFFDVAYQGFASGSLDNDASSVRLFA----TRGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       214 ~~li~Deay~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      +++++|++|...... .+..........    ...+.++++.|++|.+|.++  .|.++
T Consensus       204 ~~l~vD~A~~~~~~~-~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll  259 (462)
T d1c4ka2         204 DYIEFDSAWVGYEQF-IPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQI  259 (462)
T ss_dssp             SEEEEECTTCCGGGS-SGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEE
T ss_pred             CEEEEechhhccccc-cCcCCcchhhccccccccCCccEEEEecCccccccc--ceEEE
Confidence            999999997654321 111010100000    01235799999999998654  35553

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.58  E-value=9.3e-14  Score=125.19  Aligned_cols=274  Identities=17%  Similarity=0.159  Sum_probs=167.6

Q ss_pred             HHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCcccee
Q 015283           81 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSEYR  156 (410)
Q Consensus        81 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~  156 (410)
                      .|.+.++++-..        +..+.  +++|+.|+..+  ++..+.+||+|+++...|++....    ++..|.++..++
T Consensus         2 aLE~~la~Leg~--------~~a~~--~sSGMaAi~~~--l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d   69 (331)
T d1pffa_           2 ALEGKIAKLEHA--------EACAA--TASGMGAIAAS--VWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFID   69 (331)
T ss_dssp             HHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEec
Confidence            477888888432        33444  69999999887  566788999999999999876544    456787776665


Q ss_pred             eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhH
Q 015283          157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS  236 (410)
Q Consensus       157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~  236 (410)
                      .       .|.+.+++.+++   +++++++.+|.||+..+.+...+.+++  ++++|+++|+|+.+.....         
T Consensus        70 ~-------~d~~~~~~~i~~---~t~~i~~Es~~np~~~v~d~~~~~~~~--a~~~~~~~vVDnT~atp~~---------  128 (331)
T d1pffa_          70 M-------AVPGNIEKHLKP---NTRIVYFETPANPTLKVIDIEDAVKQA--RKQKDILVIVDNTFASPIL---------  128 (331)
T ss_dssp             T-------TSTTHHHHTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHH--TTSSSCEEEEECTTTHHHH---------
T ss_pred             c-------cchhhHhhhccc---ccceeeeecccccccccccchhhhhhh--hcccCceEEeecccccccc---------
Confidence            4       267888888865   888888899999999977665544442  4678999999999764321         


Q ss_pred             hHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHH
Q 015283          237 VRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDE  315 (410)
Q Consensus       237 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~  315 (410)
                      .+++  ..+-+|++.|.+|.++-.|--+|..+  +.+++...+.   .....+.... ......+..+.+-|+       
T Consensus       129 ~~pl--~~GaDiVv~S~TKy~~Gh~d~~~G~v--~~~~~~~~~~---~~~~~~~~~G~~l~p~~a~ll~rgl~-------  194 (331)
T d1pffa_         129 TNPL--DLGVDIVVHSATKYINGHTDVVAGLV--CSRADIIAKV---KSQGIKDITGAIISPHDAWLITRGTL-------  194 (331)
T ss_dssp             CCGG--GGTCSEEEEETTTTTSSSSSCCCEEE--EECHHHHHHH---HHTCCCCCCCCCCCHHHHHHHHHHHH-------
T ss_pred             cccc--ccCCCEEEecchhhcCCCCccccccc--cccccchhhh---hhhhhhhccCCCCCHHHHHHHHHHHH-------
Confidence            1111  12357899999999965555555552  3354432221   1111222222 344443333333333       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc----------------cCCcceeeecCCCHHHHHHhhhcCcEEE
Q 015283          316 WKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI----------------LRQIGMFSFTGLNKAQSDNMTNKWHVYM  379 (410)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ll~~~gi~v  379 (410)
                         .+....++..++...+.+.|+ +.+.-.. ..+                ...++.+.|.--..+.+.+++++-.++.
T Consensus       195 ---Tl~~Rm~~~~~nA~~lA~~L~-~hp~V~~-V~yPgl~s~p~~~~~~~~~~~~g~l~sf~l~~~~~~~~f~d~l~lf~  269 (331)
T d1pffa_         195 ---TLDMRVKRAAENAQKVAEFLH-EHKAVKK-VYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHVVS  269 (331)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHH-HCTTCCC-EECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHTCSSSE
T ss_pred             ---HHHHHHHHHHHHHHHHHHhhh-hCCcEEe-eccccccCccHHHHHhhcccccCcccceeeccHHHHHHHHHhCCcce
Confidence               233445566667777777787 6643110 111                1123444332113444555555433211


Q ss_pred             -cC--C-------------------------C------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283          380 -TK--D-------------------------G------RISLAGLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       380 -~~--~-------------------------g------Ris~~~~~~~~i~~~~~~l~~~l~~~  409 (410)
                       .+  |                         |      |+|++-   |+.+.+++.|+++++.+
T Consensus       270 ~~~SlG~~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlsvGl---E~~~DLi~Dl~~AL~~i  330 (331)
T d1pffa_         270 LAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGC---ENVQDIIDDLKQALDLV  330 (331)
T ss_dssp             ECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHTC
T ss_pred             ecccCCCCceeEeCccccccccCCHHHHHhcCCCcCeEEEEeee---CCHHHHHHHHHHHHHHh
Confidence             11  1                         1      999854   89999999999998865

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.54  E-value=1.8e-12  Score=119.05  Aligned_cols=216  Identities=12%  Similarity=0.101  Sum_probs=141.5

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~  151 (410)
                      .+....|.+.++++-..        +..+.  +++|+.|+..+  ++..+.+||.|++.+..|++....    +...|..
T Consensus        58 nPT~~~le~~la~LEg~--------~~a~~--~sSGmaAi~~~--~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~  125 (394)
T d1e5ea_          58 NPTVSNLEGKIAFLEKT--------EACVA--TSSGMGAIAAT--VLTILKAGDHLISDECLYGCTHALFEHALTKFGIQ  125 (394)
T ss_dssp             CHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred             CHHHHHHHHHHHHHhCC--------cceee--eccchHHHHHH--HHhhcccccccccccceeehhhHhHHHHhhcccee
Confidence            44566888888888432        23333  59999999887  566788999999999999776544    4467777


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH-HcCCcccccccCCCCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVAYQGFASGSL  230 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~-~~~~~li~Deay~~~~~~~~  230 (410)
                      +..++.       -|.+.+++.+++   +++++++-+|.|||..+.+..   ++++.++ ++|+++|+|+.+.....-  
T Consensus       126 ~~~~d~-------~d~~~~~~~i~~---~t~lv~~Etp~NP~l~v~Di~---~~~~~~~~~~g~~vvvDnT~atP~~~--  190 (394)
T d1e5ea_         126 VDFINT-------AIPGEVKKHMKP---NTKIVYFETPANPTLKIIDME---RVCKDAHSQEGVLVIADNTFCSPMIT--  190 (394)
T ss_dssp             EEEECT-------TSTTHHHHHCCT---TEEEEEEESSCTTTCCCCCHH---HHHHHHHTSTTCEEEEECTTTCTTTC--
T ss_pred             eeccCC-------CCHHHHHHhhcc---cccEEEEeccCCcceeeehhh---hhhhccccccCeEEEecCcccCcccC--
Confidence            777654       267888888875   788889899999999976654   5555455 568999999998654431  


Q ss_pred             CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCC
Q 015283          231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGN  309 (410)
Q Consensus       231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~  309 (410)
                        .  ++     ..+-+|++.|.+|.++-.|.=+|..  ++.+++.....+  .. ..+.... .++......+.+-|+.
T Consensus       191 --~--Pl-----~~GaDiVvhS~TKy~~GhsDv~~G~--v~~~~~~~~~~~--~~-~~~~~~G~~lsp~~a~ll~rgl~T  256 (394)
T d1e5ea_         191 --N--PV-----DFGVDVVVHSATKYINGHTDVVAGL--ICGKADLLQQIR--MV-GIKDITGSVISPHDAWLITRGLST  256 (394)
T ss_dssp             --C--GG-----GGTCSEEEEETTTTTTCSSCCCCEE--EEECHHHHHHHH--HT-CCCCCCCCCCCHHHHHHHHHHHTT
T ss_pred             --C--ch-----hcCCCEEEechhhhcCCCccccccc--ccchhhHHHHHH--HH-HHHHhhCCCCChHHHHHHHhhchh
Confidence              1  11     1235789999999996555555554  223555333221  11 1122233 4555555556666665


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      -.          ...++..++...+.+.|+ +.+
T Consensus       257 L~----------lRm~r~~~nA~~lA~~L~-~hp  279 (394)
T d1e5ea_         257 LN----------IRMKAESENAMKVAEYLK-SHP  279 (394)
T ss_dssp             HH----------HHHHHHHHHHHHHHHHHH-TCT
T ss_pred             HH----------HHHHHHHHHHHHHHHHHh-hcC
Confidence            43          334455556777777777 654

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.54  E-value=6e-14  Score=133.26  Aligned_cols=339  Identities=12%  Similarity=0.044  Sum_probs=178.0

Q ss_pred             CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283           34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS  110 (410)
Q Consensus        34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g  110 (410)
                      ...||+..|.--...|+.  +|++.+++.+++....   ...+ .......+.+.+++.+......  ..+.+.+  +++
T Consensus        53 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~~a~~lae~l~~~~~~--~~~~v~f--~~s  125 (461)
T d1ohwa_          53 NRMLDLYSQISSIPIGYS--HPALVKLVQQPQNVSTFINRPAL-GILPPENFVEKLRESLLSVAPK--GMSQLIT--MAC  125 (461)
T ss_dssp             CEEEESSHHHHTCSSCBT--CHHHHHHHHCGGGHHHHHCCCCT-TTSCBTTHHHHHHHTGGGGCCT--TCCEEEE--ESS
T ss_pred             CEEEEcccCHHHHhhcCC--cHHHHHHHHHHHhhhhhcccccc-cccchHHHHHHHHHHHHhhhcc--Ccceeee--ecc
Confidence            467898877543344654  5889999887664311   0111 1122334566666665433211  1467888  899


Q ss_pred             hhhHHHHHHHHHHHh--------------------------CCCCEEEEcCCCCcchhh-hhhhCCCCc-----------
Q 015283          111 GTGSLRLAAALIERY--------------------------FPGAKVLISSPTWGNHKN-IFNDARVPW-----------  152 (410)
Q Consensus       111 gt~a~~~~~~~~~~~--------------------------~~gd~Vl~~~p~y~~~~~-~~~~~g~~~-----------  152 (410)
                      |++|++.+.++.+.+                          .+...|+....+|.+... .+...|-+.           
T Consensus       126 GseAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~  205 (461)
T d1ohwa_         126 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW  205 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCC
T ss_pred             hhhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCC
Confidence            999999998776543                          123478888887765432 222222110           


Q ss_pred             cceeeecCC-C-----------cccChhhHHHHH---hcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcc
Q 015283          153 SEYRYYDPK-T-----------VGLDFEGMIADI---KAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIP  216 (410)
Q Consensus       153 ~~v~~~~~~-~-----------~~~d~~~l~~~i---~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~l  216 (410)
                      ...+..... .           ...+++.+++.+   ...++...++++...+...|.. ++++-+++|.++|++||+++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gill  285 (461)
T d1ohwa_         206 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF  285 (461)
T ss_dssp             CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred             cccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcce
Confidence            001100000 0           011233444443   3334566666766666666755 45666999999999999999


Q ss_pred             cccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCC
Q 015283          217 FFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNP  295 (410)
Q Consensus       217 i~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (410)
                      |.||++.+|+-.   ...+....+. ...++++   +++|.++.     |+...   ...    +..........++. .
T Consensus       286 I~DEV~tG~gRt---G~~~~~e~~gi~~~PDiv---~~gK~l~~-----g~~~~---~~~----~~~~~~~~~~~T~~-g  346 (461)
T d1ohwa_         286 LVDEVQTGGGST---GKFWAHEHWGLDDPADVM---TFSKKMMT-----GGFFH---KEE----FRPNAPYRIFNTWL-G  346 (461)
T ss_dssp             EEECTTTCSSTT---SSSSGGGGGCCSSCCSEE---EECGGGSS-----EEEEE---CGG----GSCSSTTSSCCSCS-S
T ss_pred             eccccccccccc---cccccccccccccCchhh---hhhhcccc-----ccccc---ccc----cccccccccccccc-c
Confidence            999999998732   2333332321 1123444   67898752     33311   222    11111111222333 3


Q ss_pred             ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC--CCcccccCCcceeeecCC-C----HHHH
Q 015283          296 PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG--KDWSFILRQIGMFSFTGL-N----KAQS  368 (410)
Q Consensus       296 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~--~~~~~~~~~~~~~~~~~~-~----~~~~  368 (410)
                      ..++..++...|+--      ++  +...++.++..+++.+.|+ ++...  ..+.-+ ...|.+.-+.+ +    .++.
T Consensus       347 ~p~~~aaa~a~l~~i------~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~~~i~~v-rG~Gl~~~ie~~~~~~~~~i~  416 (461)
T d1ohwa_         347 DPSKNLLLAEVINII------KR--EDLLSNAAHAGKVLLTGLL-DLQARYPQFISRV-RGRGTFCSFDTPDESIRNKLI  416 (461)
T ss_dssp             CHHHHHHHHHHHHHH------HH--TTHHHHHHHHHHHHHHHHH-HHHHHCTTTCEEE-EEETTEEEEECSSHHHHHHHH
T ss_pred             ccccchhhcccchhh------hh--hhHHHHHHHHHHHHHHHHH-HHHhhCCCceEEe-eeeeEEEEEEcCCHHHHHHHH
Confidence            334444443333210      00  1233444445555555554 43110  001112 22344433333 2    2345


Q ss_pred             HHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283          369 DNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHNV  409 (410)
Q Consensus       369 ~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~~  409 (410)
                      ..+++ +|+++.+.|    ||..+ .+|+++++.++++|.+++.+.
T Consensus       417 ~~~~~-~Gll~~~~~~~~ir~~PpL~it~~eid~~~~~l~~~l~ef  461 (461)
T d1ohwa_         417 SIARN-KGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADF  461 (461)
T ss_dssp             HHHHH-TTEECEEETTTEEECCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHH-CCeEEeeCCCCEEEEeCCcCCCHHHHHHHHHHHHHHHhcC
Confidence            56665 699998855    66533 249999999999999999863

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.52  E-value=1.6e-12  Score=120.03  Aligned_cols=158  Identities=20%  Similarity=0.138  Sum_probs=113.7

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      .+....|.+.++++-..        +.-++  +++|+.|+..+  ++..+.+||+|+++...|++....++    ..|.+
T Consensus        57 nPT~~~LE~~la~LE~~--------~~a~~--~~SGmaAi~~~--~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~  124 (421)
T d2ctza1          57 NPTVDVLEKRLAALEGG--------KAALA--TASGHAAQFLA--LTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIE  124 (421)
T ss_dssp             CHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCE
T ss_pred             CHHHHHHHHHHHHHhCC--------CeEEE--ecChHHHHHHH--HHhhcccccceeecCCcCCchhHHHHHHHhhcccc
Confidence            44567888888888533        23333  59999998887  66678899999999999988766554    56766


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC--CCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ--GFASGS  229 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~--~~~~~~  229 (410)
                      +..+...  +    +.+..++.++   +++++|++-+|.|||..+.   |+++|+++|+++|+++|+|+.+.  ++... 
T Consensus       125 ~~~~d~~--~----~~~~~~~~~~---~~t~li~~EtpsNP~l~v~---Di~~i~~iA~~~g~~~vvDnT~a~tP~~~~-  191 (421)
T d2ctza1         125 VRFTSRE--E----RPEEFLALTD---EKTRAWWVESIGNPALNIP---DLEALAQAAREKGVALIVDNTFGMGGYLLR-  191 (421)
T ss_dssp             EEECCTT--C----CHHHHHHHCC---TTEEEEEEESSCTTTCCCC---CHHHHHHHHHHHTCEEEEECGGGGGGTSCC-
T ss_pred             ceecccc--c----CcchhccccC---CCceEEEEcCCCcceeEec---chHHHHHHHHhcCCceEecccccccceecc-
Confidence            6665431  1    2234444454   4889999999999999965   56677778999999999999975  23321 


Q ss_pred             CCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283          230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV  269 (410)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~  269 (410)
                            ++     ..+-+|++.|.+|.++-.|--+|.+++
T Consensus       192 ------Pl-----~~GaDiVvhS~TKyl~GHsD~l~G~vv  220 (421)
T d2ctza1         192 ------PL-----AWGAALVTHSLTKWVGGHGAVIAGAIV  220 (421)
T ss_dssp             ------GG-----GGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred             ------cc-----ccCCcEEEEechhhccCCCCeEEEEEE
Confidence                  11     123579999999999766776777643

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.51  E-value=3e-13  Score=128.53  Aligned_cols=325  Identities=10%  Similarity=0.018  Sum_probs=196.2

Q ss_pred             HHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCccc-------CCceEEEecCChhhHHHHHHHHHHHh----
Q 015283           57 VKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-------EQRVATVQGLSGTGSLRLAAALIERY----  125 (410)
Q Consensus        57 v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~-------~~~i~~~~t~ggt~a~~~~~~~~~~~----  125 (410)
                      +.+.+...++... ..|.......++...+.+|+.+..|.+-.       ...-.+  |+|||+++..+....+..    
T Consensus        90 l~~~~~~~~n~n~-~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~--~~Ggs~anl~al~~AR~~~~~~  166 (476)
T d1js3a_          90 LADMLCGAIGCIG-FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI--QGSASEATLVALLAARTKVVRR  166 (476)
T ss_dssp             HHHHHHHHHCCCC-SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE--ESCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcccc-cchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceE--CCcHHHHHHHHHHHHHHHHHHh
Confidence            3344555554433 44444445568888888888777666321       122345  899999998875443321    


Q ss_pred             ----CCC---------CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCC
Q 015283          126 ----FPG---------AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCA  189 (410)
Q Consensus       126 ----~~g---------d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p  189 (410)
                          .+|         -.|++++-+|.+....+...|..++.+|+  ++++.+|++.|++.+.+   .+..+.+++.+..
T Consensus       167 ~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lGl~~~~v~~--d~~~~md~~~L~~~i~~~~~~g~~p~~VvataG  244 (476)
T d1js3a_         167 LQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPS--DGKFAMRASALQEALERDKAAGLIPFFVVATLG  244 (476)
T ss_dssp             HHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECC--CTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             hcccccCcccccccCceEEEecccccHHHHHHHHhcCceEEEecc--CCCCCcCHHHHHHHHHHHHhcCCCcEEEeecCC
Confidence                011         14777888999999999999999888887  56789999999999865   2334566776778


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEE
Q 015283          190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMN  268 (410)
Q Consensus       190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~  268 (410)
                      ++.||.   .+++++|+++|++||+++.+|.+|.++......     .+.... ...-+-+..+++|.++.|. ..|.+ 
T Consensus       245 tt~~G~---iDpl~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~-----~~~~~~gi~~aDSit~d~HK~l~~P~-~~g~~-  314 (476)
T d1js3a_         245 TTSCCS---FDNLLEVGPICHEEDIWLHVDAAYAGSAFICPE-----FRHLLNGVEFADSFNFNPHKWLLVNF-DCSAM-  314 (476)
T ss_dssp             CTTTCC---BCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTT-----TGGGGTTGGGCSEEEECHHHHSSCCS-SCEEE-
T ss_pred             Ccccee---eccHHHHHHHHHhcCcEEEEecccchhhhhhcc-----hhhhhcCCcccceeeecCccccccCC-cceee-
Confidence            899999   677888888899999999999999876532111     111111 1123455668899987664 45665 


Q ss_pred             EEeCCchhHHHHHH----HHHhhc----------cCcccCC-ChhHHH--HHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283          269 VVCSSSDLAARVKS----QLKRLA----------RPMYSNP-PVHGAR--IVANVVGNPALFDEWKAEMEMMAGRIKNVR  331 (410)
Q Consensus       269 ~~~~~~~~~~~~~~----~~~~~~----------~~~~~~~-~~~~~~--~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  331 (410)
                       ..+++........    ++....          ..+...+ ...+..  ++...+.        .+.+++..++..+..
T Consensus       315 -l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~G--------~~g~~~~i~~~~~lA  385 (476)
T d1js3a_         315 -WVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG--------VKGLQAYIRKHVQLS  385 (476)
T ss_dssp             -EESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH--------HHHHHHHHHHHHHHH
T ss_pred             -cccchHHHHHHHhcChhhhccccccccccccccccccccchhhHHHHHHHHHHHHh--------HhHHHHHHHHHHHHH
Confidence             4455443221100    010000          0000011 111111  1111111        345677778888889


Q ss_pred             HHHHHHhhhccCCCCCcccc-cCCccee--eecCC---CHHHHHHhhhcCcEEEcCC---C----eEEecC--CCcccHH
Q 015283          332 QKLFDSLSAKDKSGKDWSFI-LRQIGMF--SFTGL---NKAQSDNMTNKWHVYMTKD---G----RISLAG--LSLAKCE  396 (410)
Q Consensus       332 ~~l~~~l~~~~g~~~~~~~~-~~~~~~~--~~~~~---~~~~~~~ll~~~gi~v~~~---g----Ris~~~--~~~~~i~  396 (410)
                      +++.+.++ +.+.   ++.. +|..+..  .+.+.   +..+.+++.++..+++.+.   |    |+++.+  .++++++
T Consensus       386 ~~l~~~l~-~~~~---fel~~~p~l~iV~Fr~~~~d~~n~~l~~~l~~~G~~~~s~t~~~g~~~lR~~i~n~~Tt~~did  461 (476)
T d1js3a_         386 HEFEAFVL-QDPR---FEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVR  461 (476)
T ss_dssp             HHHHHHHH-HCTT---EEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHH
T ss_pred             HHHHHHHh-cCCC---eEEECCCceEEEEEEccCChHHHHHHHHHHHhcCCEEEeeeeECCEEEEEEEeCCCCCCHHHHH
Confidence            99999988 6642   4433 3444433  23332   2344566665433544432   3    988763  3678999


Q ss_pred             HHHHHHHHHhhhc
Q 015283          397 YLADAIIDSYHNV  409 (410)
Q Consensus       397 ~~~~~l~~~l~~~  409 (410)
                      .+++.|+++.+++
T Consensus       462 ~~~~~i~~~a~~l  474 (476)
T d1js3a_         462 LAWEHIRGLAAEL  474 (476)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987664

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.48  E-value=2.1e-12  Score=118.45  Aligned_cols=211  Identities=14%  Similarity=0.083  Sum_probs=134.0

Q ss_pred             CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283           76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP  151 (410)
Q Consensus        76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  151 (410)
                      .+....|.+.++++-.+        +.-+.  +++|+.|+..   ++..+.+||+|++....|++....+.    ..|.+
T Consensus        54 nPT~~~lE~~la~LE~~--------~~a~~--~sSGmaAi~~---~l~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~  120 (393)
T d1n8pa_          54 NPNRENLERAVAALENA--------QYGLA--FSSGSATTAT---ILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVE  120 (393)
T ss_dssp             CHHHHHHHHHHHHHTTC--------SEEEE--ESCHHHHHHH---HHHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSC
T ss_pred             ChHHHHHHHHHHHHhCC--------ceEEE--ecCchhHHHh---hhhcccCCCeeeeeeeecccchhhhhhhhhcccce
Confidence            44567888888888422        23333  5888888754   35567799999999999988766555    44444


Q ss_pred             ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH----HcCCcccccccCCCCCC
Q 015283          152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ----EKNHIPFFDVAYQGFAS  227 (410)
Q Consensus       152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~----~~~~~li~Deay~~~~~  227 (410)
                      +..++        .+.+++++.++.   +++++++-+|.||+..+.+.+   +++++|+    ++|+++|+|+.|.....
T Consensus       121 ~~~~~--------~~~~~~~~~i~~---~t~lv~~EspsNP~l~v~Di~---~ia~~a~~~~~~~g~~lvVDnT~atP~~  186 (393)
T d1n8pa_         121 TSFTN--------DLLNDLPQLIKE---NTKLVWIETPTNPTLKVTDIQ---KVADLIKKHAAGQDVILVVDNTFLSPYI  186 (393)
T ss_dssp             CEEES--------SHHHHHHHHSCS---SEEEEEECSSCTTTCCCCCHH---HHHHHHHHHTTTTTCEEEEECTTTHHHH
T ss_pred             eEEee--------cchHHHHHHhhh---hcceeEecCcchhhhhccchh---hhhhhhhhhcccCCceEEEecCccCccc
Confidence            44332        245778887764   888999999999999977655   5555566    78999999999753221


Q ss_pred             CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh
Q 015283          228 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV  307 (410)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l  307 (410)
                               .+++  ..+-+|++.|.+|.++-.|-=+|.++ +.+++++.++++....    ......+......+.+-|
T Consensus       187 ---------~~Pl--~~GADiVvhS~TKyi~GhsDv~~G~v-~~~~~~~~~~l~~~~~----~~G~~~~p~~a~ll~rgl  250 (393)
T d1n8pa_         187 ---------SNPL--NFGADIVVHSATKYINGHSDVVLGVL-ATNNKPLYERLQFLQN----AIGAIPSPFDAWLTHRGL  250 (393)
T ss_dssp             ---------CCGG--GGTCSEEEEETTTTTTCSSCCCCEEE-EESCHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHH
T ss_pred             ---------CCch--hhCCCEEEEccccccCCCCcccccee-eecchhHHHHHHHHHh----hcCCCCChHHHHHHHhCC
Confidence                     1111  22357899999999964444344432 4566666666654332    112234455555556666


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283          308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS  339 (410)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  339 (410)
                      +.-.          ...++..++...+.+.|+
T Consensus       251 ~Tl~----------lR~~~~~~nA~~lA~~L~  272 (393)
T d1n8pa_         251 KTLH----------LRVRQAALSANKIAEFLA  272 (393)
T ss_dssp             TTHH----------HHHHHHHHHHHHHHHHHT
T ss_pred             cchh----------hHHHHHHHHHHHHHHHHH
Confidence            6543          333444455666666665

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.41  E-value=4.2e-13  Score=123.81  Aligned_cols=313  Identities=12%  Similarity=0.005  Sum_probs=163.3

Q ss_pred             CcccccHHHHHHHHHhhccC----CCccCcCC------cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLERG----ENKEYLPI------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA  118 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~----~~~~y~~~------~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~  118 (410)
                      |+..+|++|++++.+.+.+.    ....+...      .-+.+.|+.+++++....     ...|++  ++|++.+...+
T Consensus        10 GP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~-----~~~i~~--~~gs~t~~~ea   82 (361)
T d2c0ra1          10 GPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPT-----GYKVLF--IQGGASTQFAM   82 (361)
T ss_dssp             SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCS-----SEEEEE--ESSHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCC-----CCEEEE--ECCCchHHHHH
Confidence            45667899999998876331    10101111      123566777777754321     235666  55554444333


Q ss_pred             HHHHHHhCCCCEEEEcCCCC-c-chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC
Q 015283          119 AALIERYFPGAKVLISSPTW-G-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID  196 (410)
Q Consensus       119 ~~~~~~~~~gd~Vl~~~p~y-~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~  196 (410)
                       .+.....+|+.+++..-.. . .+..+.+..|..+..++.  +.....+++.+++.+..   .+...+    +|.||..
T Consensus        83 -~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~v----~~~tg~~  152 (361)
T d2c0ra1          83 -IPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASS--EASNYMTLPKLQEIQLQ---DNAAYL----HLTSNET  152 (361)
T ss_dssp             -HHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEEC--GGGTTCSCCCGGGCCCC---TTEEEE----EEESEET
T ss_pred             -HHhccccCCCceEEEeechhhhhhhhhhhhcCceeeeecc--ccccccchhhhhhhccc---CcceEE----EEecccc
Confidence             1444566888887665432 2 334566678887777765  33344566777665543   344333    4788887


Q ss_pred             CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh
Q 015283          197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL  276 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~  276 (410)
                      .+..+   +.++|+++|+++++|.+ +.++..+.+.+         .  ..+.+.|.+|.++++|.  +++++.  .+..
T Consensus       153 ~~~~~---i~~~~~~~~al~~vDav-ss~g~~~id~~---------~--~di~~~s~~k~~~~~~~--~~~~~~--~~~~  213 (361)
T d2c0ra1         153 IEGAQ---FKAFPDTGSVPLIGDMS-SDILSRPFDLN---------Q--FGLVYAGAQKNLGPSGV--TVVIVR--EDLV  213 (361)
T ss_dssp             TTTEE---CSSCCCCTTSCEEEECT-TTTTSSCCCGG---------G--CSEEEEETTTTTCCSSC--EEEEEE--GGGS
T ss_pred             eecce---EEEeeccCCceEEEEee-ccccccccccc---------c--ceeEEEecccccccccC--cEEEEE--hHHh
Confidence            66654   55669999999999999 54443222211         1  23445678999988774  333222  2221


Q ss_pred             HH---------HHHHHHHhhccCcccCCChhHHHHH----HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283          277 AA---------RVKSQLKRLARPMYSNPPVHGARIV----ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK  343 (410)
Q Consensus       277 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~a----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g  343 (410)
                      .+         .+........  ....++......+    ......+        .......+.++++..+..... ...
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~  282 (361)
T d2c0ra1         214 AESPKHLPTMLRYDTYVKNNS--LYNTPPSFGIYMVNEVLKWIEERG--------GLEGVQQANRKKASLIYDAID-QSG  282 (361)
T ss_dssp             SSCCTTSCGGGCHHHHHHTTT--CSSCCCHHHHHHHHHHHHHHHHTT--------HHHHHHHHHHHHHHHHHHHHH-TST
T ss_pred             hhCcccccccccccccccccc--ccccccceeeehhhhHHHhhhhcc--------chHHHHHHHHHHHHHhhhhhh-hcc
Confidence            00         0111111111  1122222211111    1111111        112334444444444444444 332


Q ss_pred             CCCCccccc---CCc-ceeeecC-CCHHHHHHhhhcCcEEEcCC-----C-eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          344 SGKDWSFIL---RQI-GMFSFTG-LNKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       344 ~~~~~~~~~---~~~-~~~~~~~-~~~~~~~~ll~~~gi~v~~~-----g-Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      ........+   +.+ ..|...+ .+.+.+.+.++++||.+.+|     | ||++.+ .+.||++++++.|++..++
T Consensus       283 ~~~~~~~~~~~rS~~~~~~~~~~~~~~~~~~~~L~~~GI~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~  359 (361)
T d2c0ra1         283 GFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS  359 (361)
T ss_dssp             TSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCChhhccceEEEEECCCcccHHHHHHHHHHCCCEEecCCCcCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            111011111   111 1111111 23455667778889999887     2 999654 5899999999999997664

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.25  E-value=7e-12  Score=115.13  Aligned_cols=319  Identities=12%  Similarity=-0.050  Sum_probs=159.8

Q ss_pred             CcccccHHHHHHHHHhhccCCCc--------cCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLERGENK--------EYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA  118 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~~--------~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~  118 (410)
                      |+..+|++|++++.+.+.+....        +..+  ..-+.+.|+.+++++....     ...|++  ++|++++...+
T Consensus         8 GP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~-----~~~v~~--~~gs~t~~~~a   80 (360)
T d1bjna_           8 GPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPS-----NYKVLF--CHGGGRGQFAA   80 (360)
T ss_dssp             SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCT-----TEEEEE--ESSHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCC-----CCEEEE--ECCchHHHHhh
Confidence            55667999999999876321000        0111  1125688888888875542     335676  66776665554


Q ss_pred             HHHHHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC
Q 015283          119 AALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID  196 (410)
Q Consensus       119 ~~~~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~  196 (410)
                      . ......+++.+++..-.+...  ....+..|..++.+...  .....+.+.++..+..   ++.++++...+|.||+.
T Consensus        81 ~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~v~v~~~~~~t~~~  154 (360)
T d1bjna_          81 V-PLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKV--TVDGLRAVKPMREWQL---SDNAAYMHYCPNETIDG  154 (360)
T ss_dssp             H-HHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEE--EETTEEEECCGGGCCC---CSSCSCEEECSEETTTT
T ss_pred             h-hhcccccccccceecccchhhhhHHHHhhcCccceeeccc--cCCCcchhhhhhhhcc---CCceeEEEecccccccC
Confidence            2 333455778888876655433  33445556555444432  1222344444444443   22223333467888886


Q ss_pred             CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh
Q 015283          197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL  276 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~  276 (410)
                      .+...   +  .++.+++.+++|.+ +++..  .+.+.+         ...+.+.|.+|.+++|+. .+.++  . .+..
T Consensus       155 ~~~~~---i--~~~~~~~~v~vDa~-~~~~~--~~vd~~---------~~dv~~~ss~k~~~~~~~-~~~~~--~-~~~~  213 (360)
T d1bjna_         155 IAIDE---T--PDFGADVVVAADFS-STILS--RPIDVS---------RYGVIYAGAQKNIGPAGL-TIVIV--R-EDLL  213 (360)
T ss_dssp             EECCC---C--CCCCTTCCEEEECT-TTTTS--SCCCGG---------GCSEEEEETTTTTSSTTC-EEEEE--E-GGGC
T ss_pred             ccccc---e--ecccccceeeeeee-ccccc--eeeeec---------cceeEEEEcccccccCCC-ceeEe--e-ehhh
Confidence            54433   3  25667999999988 44443  222222         134566788888876543 33332  2 2221


Q ss_pred             HHH---------HHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283          277 AAR---------VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD  347 (410)
Q Consensus       277 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~  347 (410)
                      .+.         .........  .+..++......+...... ...   ....+...++.++....+.+.+. ..+....
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  286 (360)
T d1bjna_         214 GKANIACPSILDYSILNDNGS--MFNTPPTFAWYLSGLVFKW-LKA---NGGVAEMDKINQQKAELLYGVID-NSDFYRN  286 (360)
T ss_dssp             SCCCTTSCGGGCHHHHHHTTT--CSSCCCHHHHHHHHHHHHH-HHH---TTHHHHHHHHHHHHHHHHHHHHH-HCSSEEC
T ss_pred             hhccccCCcchhhHHHHhhhh--hccccccchHHHHHHHHHH-Hhh---hhhHHHHHHHHHHHHHHHHHhhh-ccccccc
Confidence            110         011111111  1122222221222111100 000   01122333444444444444444 4432110


Q ss_pred             c--ccccC-Ccceeeec-CCCHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283          348 W--SFILR-QIGMFSFT-GLNKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN  408 (410)
Q Consensus       348 ~--~~~~~-~~~~~~~~-~~~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~  408 (410)
                      .  ..... ....|.+. +...+.+..+++++||.+..|    |  |||+.. .|+|+++++++.|++..++
T Consensus       287 ~~~~~~rs~~v~~f~~~~~~~~~~~~~~l~~~Gi~~~~G~~~~g~~Ris~~~~~t~edV~~li~~l~e~~~~  358 (360)
T d1bjna_         287 DVAKRNRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERR  358 (360)
T ss_dssp             CBCGGGBCSSEEEEEESSGGGHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cCCcccccceEEEEEcCCcccHHHHHHHHHHCCCEeecCCCccCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence            0  10111 11123332 245555666667789999887    2  999765 5899999999999997654

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.14  E-value=2.4e-10  Score=104.78  Aligned_cols=181  Identities=9%  Similarity=-0.116  Sum_probs=99.1

Q ss_pred             CcccccHHHHHHHHHhhccCCC-cc-------CcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283           49 LQPYVLDVVKKAENLMLERGEN-KE-------YLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA  118 (410)
Q Consensus        49 ~~~~~~~~v~~a~~~~~~~~~~-~~-------y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~  118 (410)
                      |+.++|++|.+++.+.+.+... ..       ..+  ..-..+.|+.+++++....     ...|++  ++|++++...+
T Consensus        10 GP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~-----~~~i~~--~~gt~~~~~~~   82 (360)
T d1w23a_          10 GPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPN-----DYQILF--LQGGASLQFTM   82 (360)
T ss_dssp             SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCT-----TEEEEE--ESSHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCC-----CCEEEE--eCCcHHHHHHH
Confidence            4455789999999886532100 00       000  1124678888888875431     234666  66665555544


Q ss_pred             HHHHHHhCCCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC
Q 015283          119 AALIERYFPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID  196 (410)
Q Consensus       119 ~~~~~~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~  196 (410)
                      . ......+++.+++....+..  +...++..+...+....  ++....+++.++.....   .+...+    +|.||..
T Consensus        83 ~-~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~----~~~tg~~  152 (360)
T d1w23a_          83 L-PMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAAST--KANSYQSIPDFSEFQLN---ENDAYL----HITSNNT  152 (360)
T ss_dssp             H-HHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEEC--GGGTSCSCCCGGGCCCC---TTEEEE----EEESEET
T ss_pred             H-HhhhcccCcccceeeccchhhhhHHHHHHhhhcceeecc--ccccccchhhhhhcccc---ccccee----EecCCcc
Confidence            2 44445578888887654432  23344455544444433  22222333444433332   344333    4778886


Q ss_pred             CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC
Q 015283          197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA  261 (410)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  261 (410)
                      .+.+   +|.++|+++|+++++|.+ +.++-.+.+.+         ..  .+.+.+++|.++++|
T Consensus       153 ~~~~---~i~~~~~~~g~l~ivDav-qs~g~~~id~~---------~~--~vd~~~~~~~k~~~~  202 (360)
T d1w23a_         153 IYGT---QYQNFPEINHAPLIADMS-SDILSRPLKVN---------QF--GMIYAGAQKNLGPSG  202 (360)
T ss_dssp             TTTE---ECSSCCCCCSSCEEEECT-TTTTSSCCCGG---------GC--SEEEEETTTTTSCTT
T ss_pred             ccce---eeeeccccceeeEEeecc-ccccccccccc---------cc--cceEEeeccccccCC
Confidence            6655   556669999999999999 44442222221         11  234456777776555

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=98.84  E-value=3.3e-08  Score=91.26  Aligned_cols=291  Identities=9%  Similarity=0.009  Sum_probs=154.7

Q ss_pred             ccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----
Q 015283           71 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----  144 (410)
Q Consensus        71 ~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----  144 (410)
                      +.|.|  .+|..++.-.+..++....|.+..  +...  -.|+++..+.+. ........++++++.-+++.++..    
T Consensus        96 tPyqpE~sQG~Lq~l~e~q~~l~eltGmd~~--n~s~--~~ga~a~~~~~~-~~~~~~~~~~~~v~~~~~p~~~~v~~t~  170 (437)
T d1wyua1          96 TPYQPEVSQGVLQATFEYQTMIAELAGLEIA--NASM--YDGATALAEGVL-LALRETGRMGVLVSQGVHPEYRAVLRAY  170 (437)
T ss_dssp             SCCSGGGCHHHHHHHHHHHHHHHHHHTSSEE--CSCB--SSHHHHHHHHHH-HHHHHHTCCEEEEETTSCHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhCCCcc--ccCc--hHHHHHHHHHHH-HHHhhhcccccccccccChHHhhhhhhh
Confidence            44554  345544444444444333343321  2222  455555555543 333455678999999998877554    


Q ss_pred             hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC
Q 015283          145 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG  224 (410)
Q Consensus       145 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~  224 (410)
                      ++..|.+++.++..+.   ..+.++    +.   +.+..+++.+| |-.|..   ++++++++++++.|.+++.|..-..
T Consensus       171 a~~~g~~vv~v~~~~~---~~~~~~----~~---~~~Aavmi~~P-nt~G~~---ed~~~i~~~~h~~G~l~~~~ad~~a  236 (437)
T d1wyua1         171 LEAVGAKLLTLPLEGG---RTPLPE----VG---EEVGAVVVQNP-NFLGAL---EDLGPFAEAAHGAGALFVAVADPLS  236 (437)
T ss_dssp             HHHTTCEEEEECCBTT---BCCCCC----CC---TTEEEEEEESS-CTTSBC---CCHHHHHHHHHHTTCEEEEECCTTG
T ss_pred             cccceeeEEeeecccc---cchhhh----hc---cceeEEEEccc-cccccc---cchHHHHHHhhhccceEEeeechhh
Confidence            4467999988887322   222222    22   47777787777 446774   4688999999999997766644222


Q ss_pred             CCCCCCCCchhHhHHHhhcCCcEEEEecccccc----cccCCCcceEEEEeCCchhHHHHHH------------------
Q 015283          225 FASGSLDNDASSVRLFATRGMELLVAQSYSKNL----GLYAERIGAMNVVCSSSDLAARVKS------------------  282 (410)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~----~~~G~r~G~l~~~~~~~~~~~~~~~------------------  282 (410)
                      ++.  . .      . ..+.+-+|++++ +|.|    |..|-..|++.+   .+++...+-.                  
T Consensus       237 l~~--l-~------~-Pg~~GaDi~~g~-~q~fg~p~g~GGP~~G~~a~---~~~l~r~lPgrivg~s~d~~G~~~~~l~  302 (437)
T d1wyua1         237 LGV--L-K------P-PGAYGADIAVGD-GQSLGLPMGFGGPHFGFLAT---KKAFVRQLPGRLVSETVDVEGRRGFILT  302 (437)
T ss_dssp             GGT--B-C------C-HHHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEE---CGGGGGGCCSCCEEEEEBTTSCEEEEEC
T ss_pred             hhc--c-c------c-ccccccceEeec-cceeccccCCCcCccccccc---cchhhccccccccccccccCCcccceee
Confidence            221  1 1      1 112234566666 6654    333444577643   5553222110                  


Q ss_pred             ------HHHhhccC--cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283          283 ------QLKRLARP--MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ  354 (410)
Q Consensus       283 ------~~~~~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~  354 (410)
                            ..+..+..  ...+...++..+...+..-+      .+.++++.++...+..++.+.|. +++.   +....+.
T Consensus       303 lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG------~~GL~~ia~~a~~~A~yl~~~L~-~~~g---~~~~~~~  372 (437)
T d1wyua1         303 LQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALG------PEGLREVALKSVEMAHKLHALLL-EVPG---VRPFTPK  372 (437)
T ss_dssp             CGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHT-TSTT---CEECSCS
T ss_pred             cccccccccccccccchhhHHHHHHHHHHHHhhhcC------cccHHHHHHHHHHHHHHHHHHhh-hcCC---eeccCCC
Confidence                  01111110  00111112222222221111      35578888999999999999998 7642   3333222


Q ss_pred             ccee--eec--CCCHH-HHHHhhhcCcEEE----cC---CC--eEEecC-CCcccHHHHHHHHHHHh
Q 015283          355 IGMF--SFT--GLNKA-QSDNMTNKWHVYM----TK---DG--RISLAG-LSLAKCEYLADAIIDSY  406 (410)
Q Consensus       355 ~~~~--~~~--~~~~~-~~~~ll~~~gi~v----~~---~g--Ris~~~-~~~~~i~~~~~~l~~~l  406 (410)
                       .+|  ..+  +.+.+ ..+++++ +|+..    .+   .+  .|++.- .|+++|+++++.|++++
T Consensus       373 -~~f~ef~v~~~~~~~~i~k~L~d-~G~~~~~~~~~~~~~~~lli~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         373 -PFFNEFALALPKDPEAVRRALAE-RGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             -SBCSEEEEECSSCHHHHHHHHHH-TTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             -CeeeEEEEECCCCHHHHHHHHHh-CCCCCCcccccCCCCCeEEEecCCCCCHHHHHHHHHHHHHhC
Confidence             233  112  33444 4566665 58852    11   12  555542 37889999999999875

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=98.64  E-value=1.1e-06  Score=81.97  Aligned_cols=312  Identities=11%  Similarity=0.042  Sum_probs=162.2

Q ss_pred             cHHHHHHHHHhhccCCCccCcC---Cccc----HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283           54 LDVVKKAENLMLERGENKEYLP---IEGL----AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF  126 (410)
Q Consensus        54 ~~~v~~a~~~~~~~~~~~~y~~---~~g~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~  126 (410)
                      .|.+.+.+....  ...+.|.|   .+|.    -++...|+++.    |.++  .|...  -.|+|+..+.+....+...
T Consensus        78 ~P~v~~~~~~~~--TaYTPYQPaEiSQG~LQalfEfQtmi~eLT----GMdv--aNaS~--yDGatA~aeA~~ma~r~~~  147 (471)
T d1wyub1          78 NPKLHEEAARLF--ADLHPYQDPRTAQGALRLMWELGEYLKALT----GMDA--ITLEP--AAGAHGELTGILIIRAYHE  147 (471)
T ss_dssp             CCHHHHHHHHTT--SSCCTTSCGGGCHHHHHHHHHHHHHHHHHH----TCSE--EECCC--SSHHHHHHHHHHHHHHHHH
T ss_pred             CcchhhhHHHHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHh----CCCc--ccccc--chHHHHHHHHHHHHHHHhh
Confidence            355555554432  22366765   3443    34555555553    3322  12222  3444544444422222211


Q ss_pred             -CC----CEEEEcCCCCc-chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHH
Q 015283          127 -PG----AKVLISSPTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPE  200 (410)
Q Consensus       127 -~g----d~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~  200 (410)
                       .|    ..+.+..+.+. .+.......+..++.++.  ......|.+.+......   .+..+++.+|++.-+.   ..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~a~v~v~~p~~~g~~---e~  219 (471)
T d1wyub1         148 DRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPS--GPEGEVDLEALKRELGP---HVAALMLTNPNTLGLF---ER  219 (471)
T ss_dssp             HTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECB--CTTSSBCHHHHHHHCST---TEEEEEECSSCTTSCC---CT
T ss_pred             hcccccccccccCCcccccceeeeeecccceeecccc--cccccccchhhhhhhhc---cccceeeccCCCcccc---cc
Confidence             22    34444445444 444455566666666665  34556777777776654   6667777777766655   44


Q ss_pred             HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc----cccCCCcceEEEEeCCchh
Q 015283          201 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL----GLYAERIGAMNVVCSSSDL  276 (410)
Q Consensus       201 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~----~~~G~r~G~l~~~~~~~~~  276 (410)
                      +.+++++++++.+..+++|.+....... . .      .....+.+++++ +.++.|    +.+|-.+|++..   .++.
T Consensus       220 ~~~~~~~~~h~~g~~~~~~~~~~~~~~~-l-~------~p~~~g~div~v-g~~q~~G~P~~~GGP~~G~~a~---~~~~  287 (471)
T d1wyub1         220 RILEISRLCKEAGVQLYYDGANLNAIMG-W-A------RPGDMGFDVVHL-NLHKTFTVPHGGGGPGSGPVGV---KAHL  287 (471)
T ss_dssp             THHHHHHHHHHHTCEEEEEGGGGGGTTT-T-C------CHHHHTCSEEEC-CTTTTTCCCCTTSCCCCCCEEE---CGGG
T ss_pred             hhhhhHHHHHhccccccccccchhhhhh-c-c------ccCccccccccc-ccccccccccccccccccceee---hhhh
Confidence            5677888899988877777663222211 1 0      111223344433 445544    444566788644   5663


Q ss_pred             HHHHHHHH--------------HhhccCcccCCC-hhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283          277 AARVKSQL--------------KRLARPMYSNPP-VHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA  340 (410)
Q Consensus       277 ~~~~~~~~--------------~~~~~~~~~~~~-~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  340 (410)
                      ..++-.++              ++.++....+.. .+...++ ..+ .   +.+  .+.+++..+.+.++..++.+.|+ 
T Consensus       288 ~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYl-s---llG--~~GL~elA~~~~~~A~Yla~~L~-  360 (471)
T d1wyub1         288 APYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYI-R---TLG--LEGLKKAAALAVLNARYLKELLK-  360 (471)
T ss_dssp             GGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHH-H---HHH--HHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             hccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHH-H---HhC--chhHHHHHHHHHHHHHHHHHHHh-
Confidence            32221100              011111111112 2222222 222 1   111  45678999999999999999998 


Q ss_pred             ccCCCCCcccccCCccee-ee-c----CCCH-HHHHHhhhcCcEEEc----CC---C--eEEecC-CCcccHHHHHHHHH
Q 015283          341 KDKSGKDWSFILRQIGMF-SF-T----GLNK-AQSDNMTNKWHVYMT----KD---G--RISLAG-LSLAKCEYLADAII  403 (410)
Q Consensus       341 ~~g~~~~~~~~~~~~~~~-~~-~----~~~~-~~~~~ll~~~gi~v~----~~---g--Ris~~~-~~~~~i~~~~~~l~  403 (410)
                      ..|.    +.. ..+.+| -| +    +.+. +..++|++ +|+...    |.   +  -|++.- .|+++||.+++.|+
T Consensus       361 ~~G~----~~~-~~~~ff~EFvv~~~~~~~~~~i~k~L~~-~G~~~~~~~~p~~~~~~llv~vTE~~tkedID~lv~aL~  434 (471)
T d1wyub1         361 EKGY----RVP-YDGPSMHEFVAQPPEGFRALDLAKGLLE-LGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMG  434 (471)
T ss_dssp             HTTC----BCS-SCSSCCSCEEEBCSTTCCHHHHHHHHHH-TTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHH
T ss_pred             hcCc----eec-cCcceeeEEeecCCCCCCHHHHHHHHHH-cCCCCCcccCcCCCCCeEEEecCCCCCHHHHHHHHHHHH
Confidence            7763    432 222333 11 1    2344 35667776 587531    21   1  445542 38899999999999


Q ss_pred             HHhhh
Q 015283          404 DSYHN  408 (410)
Q Consensus       404 ~~l~~  408 (410)
                      +++++
T Consensus       435 ~i~~e  439 (471)
T d1wyub1         435 ALLKK  439 (471)
T ss_dssp             HHHTS
T ss_pred             HHHHh
Confidence            99875