Citrus Sinensis ID: 015373
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 408 | ||||||
| 224079175 | 596 | predicted protein [Populus trichocarpa] | 0.852 | 0.583 | 0.795 | 1e-168 | |
| 449457751 | 621 | PREDICTED: putative leucine-rich repeat | 0.919 | 0.603 | 0.741 | 1e-166 | |
| 359483663 | 624 | PREDICTED: putative leucine-rich repeat | 0.865 | 0.565 | 0.779 | 1e-166 | |
| 449511662 | 621 | PREDICTED: putative leucine-rich repeat | 0.919 | 0.603 | 0.736 | 1e-164 | |
| 255536757 | 629 | serine-threonine protein kinase, plant-t | 0.919 | 0.596 | 0.727 | 1e-164 | |
| 449457749 | 625 | PREDICTED: putative leucine-rich repeat | 0.860 | 0.561 | 0.760 | 1e-161 | |
| 6560758 | 697 | F3M18.23 [Arabidopsis thaliana] | 0.924 | 0.540 | 0.729 | 1e-161 | |
| 15217901 | 626 | receptor like protein 4 [Arabidopsis tha | 0.924 | 0.602 | 0.729 | 1e-161 | |
| 449511656 | 625 | PREDICTED: putative leucine-rich repeat | 0.860 | 0.561 | 0.757 | 1e-160 | |
| 356549305 | 625 | PREDICTED: putative leucine-rich repeat | 0.914 | 0.596 | 0.691 | 1e-157 |
| >gi|224079175|ref|XP_002305781.1| predicted protein [Populus trichocarpa] gi|222848745|gb|EEE86292.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust.
Identities = 277/348 (79%), Positives = 311/348 (89%)
Query: 28 MRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPENCY 87
MRISCGAR N+H+ PTNTLW+KDFAYTGGIPANATRPS+I+PPLKTLRYFPLS GP NCY
Sbjct: 1 MRISCGARLNVHTAPTNTLWYKDFAYTGGIPANATRPSYISPPLKTLRYFPLSSGPNNCY 60
Query: 88 IINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVF 147
INRVPKGHY VR+FFGL +FD+EPLFDIS+EGTQIYSLKSGW++HDD+ F EALVF
Sbjct: 61 NINRVPKGHYTVRVFFGLDGHRNFDNEPLFDISIEGTQIYSLKSGWTNHDDQVFTEALVF 120
Query: 148 LRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKF 207
L DGT SICFHSTGHGDPAILS+EILQ++D+AYYFG W +G+ILRTA RLSCGNGKPKF
Sbjct: 121 LTDGTASICFHSTGHGDPAILSIEILQMEDRAYYFGPAWVQGIILRTAARLSCGNGKPKF 180
Query: 208 DVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQ 267
DVDYSGDHWGGDRFW+PI +FGQ +D RSTES IK+AS APN+YPEALYQTALVSTD+Q
Sbjct: 181 DVDYSGDHWGGDRFWSPIKTFGQGSDLARSTESGIKKASNAPNYYPEALYQTALVSTDTQ 240
Query: 268 PDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYT 327
PDL YTMDVDPNRNYSIWLHFAEID+++T G+RVFDILING +AF+ VD+VKMSGDRYT
Sbjct: 241 PDLAYTMDVDPNRNYSIWLHFAEIDSSVTAAGKRVFDILINGVVAFEDVDIVKMSGDRYT 300
Query: 328 ALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKTLPEE 375
ALVLNTTV V+GR LT+ LHPK GSHAIINAIEVFEI+ ESKT EE
Sbjct: 301 ALVLNTTVTVSGRILTIGLHPKEGSHAIINAIEVFEILTAESKTSLEE 348
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457751|ref|XP_004146611.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|359483663|ref|XP_002279791.2| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Vitis vinifera] gi|297740416|emb|CBI30598.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449511662|ref|XP_004164020.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255536757|ref|XP_002509445.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223549344|gb|EEF50832.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449457749|ref|XP_004146610.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like isoform 1 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|6560758|gb|AAF16758.1|AC010155_11 F3M18.23 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|15217901|ref|NP_174156.1| receptor like protein 4 [Arabidopsis thaliana] gi|332192839|gb|AEE30960.1| receptor like protein 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449511656|ref|XP_004164019.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like isoform 1 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356549305|ref|XP_003543034.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 408 | ||||||
| TAIR|locus:2032221 | 626 | RLP4 "receptor like protein 4" | 0.924 | 0.602 | 0.729 | 1.5e-152 | |
| TAIR|locus:2031175 | 628 | AT1G25570 [Arabidopsis thalian | 0.879 | 0.571 | 0.352 | 9.5e-50 | |
| TAIR|locus:2083023 | 517 | AT3G05990 [Arabidopsis thalian | 0.830 | 0.655 | 0.300 | 5.9e-22 | |
| TAIR|locus:2075316 | 470 | AT3G46270 "AT3G46270" [Arabido | 0.838 | 0.727 | 0.279 | 2.3e-13 | |
| TAIR|locus:2055165 | 868 | AT2G14510 [Arabidopsis thalian | 0.848 | 0.398 | 0.245 | 6.9e-12 | |
| TAIR|locus:2057991 | 934 | AT2G37050 [Arabidopsis thalian | 0.678 | 0.296 | 0.280 | 7.7e-12 | |
| TAIR|locus:2066158 | 884 | AT2G28990 [Arabidopsis thalian | 0.659 | 0.304 | 0.271 | 9.1e-12 | |
| TAIR|locus:2094103 | 519 | AT3G19230 [Arabidopsis thalian | 0.830 | 0.653 | 0.232 | 1.8e-11 | |
| TAIR|locus:2195830 | 837 | AT1G51870 [Arabidopsis thalian | 0.845 | 0.412 | 0.240 | 2.4e-11 | |
| TAIR|locus:2075326 | 471 | AT3G46280 "AT3G46280" [Arabido | 0.779 | 0.675 | 0.255 | 9e-11 |
| TAIR|locus:2032221 RLP4 "receptor like protein 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1488 (528.9 bits), Expect = 1.5e-152, P = 1.5e-152
Identities = 275/377 (72%), Positives = 316/377 (83%)
Query: 1 MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPAN 60
MLRF LL+ +L SS AR AP+A+RISCGAR+N+ +PPT LWFKD AYTGG+PAN
Sbjct: 2 MLRFILASLLLSSFSLYSSLARPAPYALRISCGARKNVRTPPTYALWFKDIAYTGGVPAN 61
Query: 61 ATRPSFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDIS 120
AT P++ITPPLKTLRYFP+SEGP NCY I RVPKGHY+VRIFFGLV SFD EPLFDIS
Sbjct: 62 ATTPTYITPPLKTLRYFPISEGPNNCYNIVRVPKGHYSVRIFFGLVDQPSFDKEPLFDIS 121
Query: 121 VEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAY 180
+EGTQI SLKSGWS DD+ FAEAL+FL GT +ICFHSTGHGDPAILS+EILQVDDKAY
Sbjct: 122 IEGTQISSLKSGWSSQDDQVFAEALIFLLGGTATICFHSTGHGDPAILSIEILQVDDKAY 181
Query: 181 YFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTES 240
FG+GWG+G+ILRTATRL+CG GK +FD DY GDHWGGDRFWN + SFG++AD RSTE
Sbjct: 182 SFGEGWGQGVILRTATRLTCGTGKSRFDEDYRGDHWGGDRFWNRMRSFGKSADSPRSTEE 241
Query: 241 SIKQASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQ 300
+IK+AS +PNFYPE LYQ+ALVSTD QPDL Y++DV+PNRNYS+WLHFAEIDNTIT G+
Sbjct: 242 TIKKASVSPNFYPEGLYQSALVSTDDQPDLTYSLDVEPNRNYSVWLHFAEIDNTITAEGK 301
Query: 301 RVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIE 360
RVFD++INGD F+ VD++KMSG RY ALVLN TV V+GRTLTV L PK G HAIINAIE
Sbjct: 302 RVFDVVINGDTFFEDVDIIKMSGGRYAALVLNATVTVSGRTLTVVLQPKAGGHAIINAIE 361
Query: 361 VFEIIAVESKTLPEEGS 377
VFEII E KTL +E S
Sbjct: 362 VFEIITAEFKTLRDEVS 378
|
|
| TAIR|locus:2031175 AT1G25570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083023 AT3G05990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075316 AT3G46270 "AT3G46270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055165 AT2G14510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2057991 AT2G37050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2066158 AT2G28990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2094103 AT3G19230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2195830 AT1G51870 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075326 AT3G46280 "AT3G46280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00040482 | hypothetical protein (596 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 408 | |||
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 0.0 | |
| pfam12819 | 335 | pfam12819, Malectin_like, Carbohydrate-binding pro | 1e-70 | |
| pfam11721 | 164 | pfam11721, Malectin, Di-glucose binding within end | 2e-16 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 690 bits (1782), Expect = 0.0
Identities = 284/371 (76%), Positives = 319/371 (85%), Gaps = 2/371 (0%)
Query: 7 LWLLVFCS--ALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRP 64
LWLL + A+ +S A PF MRISCGAR N+ + PTNTLW+KDFAYTGGIPANATRP
Sbjct: 3 LWLLAASALLAVLASLASPEPFTMRISCGARVNVRTAPTNTLWYKDFAYTGGIPANATRP 62
Query: 65 SFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGT 124
SFI PPLKTLRYFPLS+GPENCY INRVPKGHY+VR+FFGLV +FD EPLFD+SVEGT
Sbjct: 63 SFIAPPLKTLRYFPLSDGPENCYNINRVPKGHYSVRVFFGLVAEPNFDSEPLFDVSVEGT 122
Query: 125 QIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQ 184
QI SLKSGWS HD++ FAEALVFL DG+ SICFHSTGHGDPAILS+EILQVDDKAY FG
Sbjct: 123 QISSLKSGWSSHDEQVFAEALVFLTDGSASICFHSTGHGDPAILSIEILQVDDKAYNFGP 182
Query: 185 GWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQ 244
WG+G+ILRTA RLSCG GK KFD DYSGDHWGGDRFWN + +FG +DQ STE+ IK+
Sbjct: 183 SWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKK 242
Query: 245 ASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFD 304
AS APNFYPE+LYQ+ALVSTD+QPDL YTMDVDPNRNYS+WLHFAEIDN+IT G+RVFD
Sbjct: 243 ASNAPNFYPESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFD 302
Query: 305 ILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEI 364
+LINGD AF+ VD+VKMSG+RYTALVLN TVAV+GRTLT+ L PK G+HAIINAIEVFEI
Sbjct: 303 VLINGDTAFKDVDIVKMSGERYTALVLNKTVAVSGRTLTIVLQPKKGTHAIINAIEVFEI 362
Query: 365 IAVESKTLPEE 375
I ESKTL EE
Sbjct: 363 ITAESKTLLEE 373
|
Length = 623 |
| >gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER | Back alignment and domain information |
|---|
| >gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 408 | |||
| PLN03150 | 623 | hypothetical protein; Provisional | 100.0 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 100.0 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.88 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.67 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.43 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 99.23 | |
| KOG3593 | 355 | consensus Predicted receptor-like serine/threonine | 98.04 | |
| KOG3593 | 355 | consensus Predicted receptor-like serine/threonine | 91.63 |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-77 Score=639.18 Aligned_cols=371 Identities=77% Similarity=1.270 Sum_probs=317.6
Q ss_pred HHHHHHHHh--hhccccCCCceEEEccCCCCCCcCCCCCceeecCCCCcCCccccccCCCCCCCcceeeeeeCCCCCCCc
Q 015373 8 WLLVFCSAL--NSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPEN 85 (408)
Q Consensus 8 ~~~~~~~~~--~~~~a~~~~~~i~IdCG~~~~~~~d~~g~~w~~D~~~~~g~~~~~~~~~~~~~~y~T~R~F~~~~g~~~ 85 (408)
|||++|+.+ .++.++.++++++||||++++..+|.+||+|++|..++.|..+....++...++|+|+|+||.++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~~~~~~~~~~~~~~~~~~~~~t~R~F~~~~g~~~ 83 (623)
T PLN03150 4 WLLAASALLAVLASLASPEPFTMRISCGARVNVRTAPTNTLWYKDFAYTGGIPANATRPSFIAPPLKTLRYFPLSDGPEN 83 (623)
T ss_pred HHHHHHHHHHhhcccccCCCccEEEeCCCCCCcccCCCCCEEcCCcccccCccccccCcccccchhhccccCCccccccc
Confidence 444444444 334456788999999999987645568999999988766655544445445678999999997679999
Q ss_pred eEEEeecCCceEEEEEEEecccCCCCCCCCeEEEEECCeEEEEEecCCCCCCCcEEEEEEEEeeCCeEEEEEeeCCCCCc
Q 015373 86 CYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDP 165 (408)
Q Consensus 86 cY~~pv~~~g~ylVRl~F~~~nyd~~~~~~~Fdv~i~~~~w~tvl~~f~~~~~~~~~E~i~~~~~~~l~vcf~~~~~~~p 165 (408)
||+||++++|+|+||+||+||+||+.+..|.|||++|++.|.+|+.+|+..+..++||++++++++.++|||++++.+.|
T Consensus 84 cY~~~~~~~g~ylVRl~F~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~~~~~v~~E~i~~~~~~~l~vcf~~~~~~~p 163 (623)
T PLN03150 84 CYNINRVPKGHYSVRVFFGLVAEPNFDSEPLFDVSVEGTQISSLKSGWSSHDEQVFAEALVFLTDGSASICFHSTGHGDP 163 (623)
T ss_pred ceEeeecCCCcEEEEEEeecCCcCCCCCCCceEEEECcEEEEEEecCcccCCCcEEEEEEEEecCCcEEEEEecCCCCCC
Confidence 99999999999999999999999998889999999999999999998876667799999999999999999999988999
Q ss_pred eEEEEEEEEcCCcccccCCCCcccceeeeeeeecCCCCCCCCCcCCCCCCCCCCccccCCCCCCCCCccccccccceecC
Q 015373 166 AILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQA 245 (408)
Q Consensus 166 fIsaIEl~~l~~~~y~~~~~~~~~~al~~~~Rin~Gg~~~~~~~~y~~D~~~~DR~W~~d~~~~~~~~~~ist~~~i~~~ 245 (408)
|||+||||++|+.+|..+++.+.+.+|++++|+||||.+..+.+||++|+|++||+|.+|+.|..+.+..+++...|+++
T Consensus 164 FIs~iEv~~l~~~~y~~~~~~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~~~~~~st~~~I~~~ 243 (623)
T PLN03150 164 AILSIEILQVDDKAYNFGPSWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKKA 243 (623)
T ss_pred ceeEEEEEEcCcccccccccccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCcccCCCcccccccccccccc
Confidence 99999999999999975532234678999999999998776679999999999999999987665556677777778766
Q ss_pred CCCCCCChHHHHHHhhhcCCCCCceEEEEEeCCCCcEEEEEEEeecccCcCCcceEEEEEEECCEEeecccceeeccCCc
Q 015373 246 SKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDR 325 (408)
Q Consensus 246 ~~~~~~~P~~Vy~TAr~~~~~~~~lty~~~v~~~~~Y~V~LhFaEi~~~~~~~~~R~FdV~ing~~~~~~~di~~~~g~~ 325 (408)
.+.++.+|+.||||||++.++..+++|.|++++++.|+|||||||++......++|+|+|+|||+.+++++|+...+|+.
T Consensus 244 ~~~~~~~P~~VyqTA~~~~~~~~~lty~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~ 323 (623)
T PLN03150 244 SNAPNFYPESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGER 323 (623)
T ss_pred cCCCccChHHHhhhhccccCCCCceEEEeecCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCc
Confidence 56677899999999999876556899999999999999999999997544567899999999999999999998888877
Q ss_pred eeEEEEEEEEEecCcEEEEEEeeCCCCCceeeEEEEEEeecCCCCCCCCcccc
Q 015373 326 YTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKTLPEEGSP 378 (408)
Q Consensus 326 ~~~~~~~~~v~vs~~~L~I~f~p~~~s~p~lNaiEI~~~~~~~~~T~~~dv~a 378 (408)
+.++++++.+.++++.|+|+|+|..+++|+|||||||++.+.+.+|+++|+.|
T Consensus 324 ~~~~~~~~~v~~~~g~l~isl~p~~~s~pilNaiEI~~~~~~~~~t~~~~~~a 376 (623)
T PLN03150 324 YTALVLNKTVAVSGRTLTIVLQPKKGTHAIINAIEVFEIITAESKTLLEEVSA 376 (623)
T ss_pred ccceEEEeEEeecCCeEEEEEeeCCCCcceeeeeeeeeccccccccCchHHHH
Confidence 78999998888777889999999988889999999999999877888877654
|
|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
| >KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 408 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 3e-27 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 3e-27
Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 31/187 (16%)
Query: 189 GLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKA 248
GL + ++ G VD G H+ D G+ +D
Sbjct: 1 GLADKVIWAVNAGGES---HVDVHGIHYRKDPLEG---RVGRASDYGMKLPILR------ 48
Query: 249 PNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILIN 308
N + LYQT + DS Y + + Y + L FAE+ Q+VFD+ +N
Sbjct: 49 SNPEDQVLYQTERYNEDS---FGYDIPIKEEGEYVLVLKFAEVYFA--QSQQKVFDVRVN 103
Query: 309 GDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHP-------------KGGSHAI 355
G + +D+ G TA +++ L+V +
Sbjct: 104 GHTVVKDLDIFDRVG-HSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPK 162
Query: 356 INAIEVF 362
+ A+ +
Sbjct: 163 VCALFIM 169
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 408 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 99.96 | |
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 99.88 | |
| 2w47_A | 144 | Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. | 94.93 | |
| 2vzp_A | 127 | Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS | 94.53 | |
| 2w3j_A | 145 | Carbohydrate binding module; sugar-binding protein | 93.46 | |
| 2w87_A | 139 | Esterase D, XYL-CBM35; plant cell WALL degradation | 91.8 | |
| 2wz8_A | 156 | Cellulosome protein dockerin type I; sugar binding | 88.62 | |
| 2w3j_A | 145 | Carbohydrate binding module; sugar-binding protein | 86.52 | |
| 2w47_A | 144 | Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. | 81.29 | |
| 2wz8_A | 156 | Cellulosome protein dockerin type I; sugar binding | 80.72 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=227.39 Aligned_cols=154 Identities=19% Similarity=0.219 Sum_probs=116.7
Q ss_pred eeeeeecCCCCCCCCCcCCCCCCCCCCccccCCCCCCCCCccccccccceecCCCCCCCChHHHHHHhhhcCCCCCceEE
Q 015373 193 RTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQPDLQY 272 (408)
Q Consensus 193 ~~~~Rin~Gg~~~~~~~~y~~D~~~~DR~W~~d~~~~~~~~~~ist~~~i~~~~~~~~~~P~~Vy~TAr~~~~~~~~lty 272 (408)
++++||||||+.. .| .. +|.|.+|..+...+.... ....+.. ...+.+|+.||||||.+.. +++|
T Consensus 5 ~~~~~INcGg~~~---~d----~~--gr~w~~D~~~~~~g~~~~-~~~~~~~--~~~~~~~~~lY~TaR~~~~---~~tY 69 (174)
T 2jwp_A 5 KVIWAVNAGGESH---VD----VH--GIHYRKDPLEGRVGRASD-YGMKLPI--LRSNPEDQVLYQTERYNED---SFGY 69 (174)
T ss_dssp HEEEEEEETSSSE---EE----TT--TEEECSSCSSTTCCCCCC-CCTTSCC--SSSCHHHHHTTTCCCCCCS---CEEE
T ss_pred cEEEEEECCCCCc---cC----CC--CCEEcCCcCcccCCcccc-cccceEe--cccCCCCchhhhhhccCCC---CeEE
Confidence 5789999999753 22 22 688988865431111000 0111111 1123368899999999765 7999
Q ss_pred EEEeCCCCcEEEEEEEeecccCcCCcceEEEEEEECCEEeecccceeeccCCceeEEEEEEEEEe-------------cC
Q 015373 273 TMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAV-------------NG 339 (408)
Q Consensus 273 ~~~v~~~~~Y~V~LhFaEi~~~~~~~~~R~FdV~ing~~~~~~~di~~~~g~~~~~~~~~~~v~v-------------s~ 339 (408)
.|+++++|+|+|||||||+.. .+.++|+|||+|||++++++|||.+++|+ .+++.+++.+.+ .+
T Consensus 70 ~f~v~~~G~Y~VrLhF~ei~~--~~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~~~~~~v~~~~l~i~~~~~~~~ 146 (174)
T 2jwp_A 70 DIPIKEEGEYVLVLKFAEVYF--AQSQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDEIIPISIKKGKLSVQGEVSTFT 146 (174)
T ss_dssp EEECCSCEEEEEEEEEECCSC--CCSSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEEEEEEEEETTEEEETTEEEECC
T ss_pred EEEeCCCeEEEEEEEEecccc--CCCCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEEEEEEEEecCceeeeeeecccC
Confidence 999998999999999999975 46899999999999999999999998886 567777776653 56
Q ss_pred cEEEEEEeeCCCCCceeeEEEEEEe
Q 015373 340 RTLTVTLHPKGGSHAIINAIEVFEI 364 (408)
Q Consensus 340 ~~L~I~f~p~~~s~p~lNaiEI~~~ 364 (408)
++|+|+|.|.....|+||||||++.
T Consensus 147 g~L~I~f~p~~~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 147 GKLSVEFVKGYYDNPKVCALFIMKG 171 (174)
T ss_dssp SEEEEEEECSSSCSSSEEEEEEESS
T ss_pred CeEEEEEeccCCCCcEEEEEEEEeC
Confidence 7899999997666899999999985
|
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
| >2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A | Back alignment and structure |
|---|
| >2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* | Back alignment and structure |
|---|
| >2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} | Back alignment and structure |
|---|
| >2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A | Back alignment and structure |
|---|
| >2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} | Back alignment and structure |
|---|
| >2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A | Back alignment and structure |
|---|
| >2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 408 | |||
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 98.55 | |
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 97.41 |
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: YxiM N-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=98.55 E-value=9.1e-08 Score=80.66 Aligned_cols=80 Identities=14% Similarity=0.276 Sum_probs=62.1
Q ss_pred ceEEEEEeCCCCcEEEEEEEeecccCcCCcceEEEEEEECCEEeecccceeeccCCceeEEEEEEEEEecCcEEEEEEee
Q 015373 269 DLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHP 348 (408)
Q Consensus 269 ~lty~~~v~~~~~Y~V~LhFaEi~~~~~~~~~R~FdV~ing~~~~~~~di~~~~g~~~~~~~~~~~v~vs~~~L~I~f~p 348 (408)
...|.+++ |+|.|.|.+++.|.. ..++.++|...+..+ .|.. ..+.+.|++++|+|+|.|..
T Consensus 64 ~~~f~v~v-PnG~Y~Vtv~~Gd~~---------~~~~~~eg~~~~~~~-----~g~~---~~~~~~V~VtDG~L~l~ft~ 125 (146)
T d2o14a1 64 NNTFNVDL-PNGLYEVKVTLGNTA---------RASVAAEGVFQVINM-----TGDG---AEDTFQIPVTDGQLNLLVTE 125 (146)
T ss_dssp SCCEEEEC-CSEEEEEEEEESSCS---------EEEEEETTEEEEEEE-----ESTT---CEEEEEEEECSSEEEEEEEE
T ss_pred CceEEEEC-CCCeEEEEEEEecCC---------CccEEEeeEEecccc-----CCcc---EEEEEEEEEECCeEEEEEec
Confidence 35899998 899999999999832 247888998766554 4442 24567788999999999975
Q ss_pred C-CCCCceeeEEEEEEeec
Q 015373 349 K-GGSHAIINAIEVFEIIA 366 (408)
Q Consensus 349 ~-~~s~p~lNaiEI~~~~~ 366 (408)
. .+.+|.||+|||-++.+
T Consensus 126 ~~~G~~~~in~l~I~~~~d 144 (146)
T d2o14a1 126 GKAGTAFTLSALKIKKLSD 144 (146)
T ss_dssp SSTTSCCEEEEEEEEEEES
T ss_pred CCCCCccEEEEEEEEeccc
Confidence 4 45689999999999865
|
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|