Citrus Sinensis ID: 015373


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------41
MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKTLPEEGSPPSSGLFTAEQCIFRKFEYFYVLLIFFHSLF
cHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccccccEEEccccccccccccccccccccccccEEEEEccccccccEEEEEcccccEEEEEEEEEEEccccccccccEEEEEEccEEEEcccccccccccEEEEEEEEEccccEEEEEEEccccccEEEEEEEEEccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHHHcEEEccccccccEEEEccccccccEEEEEEEEEcccccccccEEEEEEEEccEEEcccccEEccccccEEEEEEEEEEEEcccEEEEEEEEccccccEEcEEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHccc
cHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccEEEccccHccccccccccHHHccccccEEEccccccccccEEEEEcccccEEEEEEEEEEccccccccccEEEEEEccccEEEEEEEcccccccEEEEEEEEcccccEEEEEEEccccccEEEEEEEcccccccccccccccccEEEEEEEEEEccccccccEEEccccccccccEEEcccccccccccEEEccccccccccccccccHHHHHHccccccccccEEEEEcccccccEEEEEEEHHHHcccccccEEEEEEEEccccccccccccccccccEEEEEEccccccccEEEEEEEccccccccEEEEEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHcccEEEEcccc
MLRFHFLWLLVFCSAlnsssarhapfamriscgarqnihspptntlwfkdfaytggipanatrpsfitpplktlryfplsegpencyiinrvpkghynvRIFFGLvtltsfdheplfdisvegtqiyslksgwsdhdDRAFAEALVFLRDGTvsicfhstghgdpailSLEIlqvddkayyfgqgwgeGLILRTAtrlscgngkpkfdvdysgdhwggdrfwnpilsfgqnadqrrSTESSIKQaskapnfypealYQTAlvstdsqpdlqytmdvdpnrnySIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAvngrtltvtlhpkggsHAIINAIEVFEIIAVEsktlpeegsppssglftaeQCIFRKFEYFYVLLIFFHSLF
MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPanatrpsfitppLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKTLPEEGSPPSSGLFTAEQCIFRKFEYFYVLLIFFHSLF
MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKTLPEEGSPPSSGLFTAEQCIFRKFEYFYVLLIFFHSLF
**RFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFG*********************FYPEALYQTALVST****DLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVE**************LFTAEQCIFRKFEYFYVLLIFFHS**
MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYT****************LKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAV****************FTAEQCIFRKFEYFYVLLIFFHSLF
MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQN**************SKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKT**********GLFTAEQCIFRKFEYFYVLLIFFHSLF
MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKT*********S*LFTAEQCIFRKFEYFYVLLIFFHSLF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKTLPEEGSPPSSGLFTAEQCIFRKFEYFYVLLIFFHSLF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query408 2.2.26 [Sep-21-2011]
Q9ZQR3 868 Leucine-rich repeat recep no no 0.830 0.390 0.246 3e-12
O81069 884 Probable leucine-rich rep no no 0.661 0.305 0.252 2e-10
Q8L4H4 925 Nodulation receptor kinas N/A no 0.796 0.351 0.258 3e-10
C0LGG6 876 Probable LRR receptor-lik no no 0.678 0.316 0.268 5e-10
Q9SNA3 889 Putative receptor-like pr no no 0.774 0.355 0.235 5e-10
Q9FZB1 872 Probable LRR receptor-lik no no 0.524 0.245 0.301 6e-10
Q9ZQQ7 886 Putative leucine-rich rep no no 0.742 0.341 0.266 4e-09
Q9FN94 868 Receptor-like protein kin no no 0.752 0.353 0.265 6e-09
C0LGR6 913 Probable LRR receptor-lik no no 0.757 0.338 0.250 9e-09
Q8LKZ1 924 Nodulation receptor kinas N/A no 0.821 0.362 0.237 1e-08
>sp|Q9ZQR3|Y2451_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 OS=Arabidopsis thaliana GN=At2g14510 PE=2 SV=1 Back     alignment and function desciption
 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 154/385 (40%), Gaps = 46/385 (11%)

Query: 28  MRISCG--ARQNIHSPPTNTLWFKDFAY-----TGGIPANATRPSFITPPLKTLRYFPLS 80
           + + CG  ++++   P +N  +  D  +     TG I  N +R +FI  P K LRYFP  
Sbjct: 30  ISLDCGLPSKESYIEPSSNLTFISDVNFIRGGKTGNI-QNNSRTNFIFKPFKVLRYFP-- 86

Query: 81  EGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRA 140
           +G  NCY ++      Y +R  F        +  P FD+ +      S+    +D  D  
Sbjct: 87  DGIRNCYSLSVKQGTKYLIRTLFYYGNYDGLNTSPRFDLFLGPNIWTSVDVLIADVGDGV 146

Query: 141 FAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSC 200
             E +   R   + IC   TG   P I ++E+  +    Y    G      L++      
Sbjct: 147 VEEIVHVTRSNILDICLVKTGTSTPMISAIELRPLRYDTYTARTG-----SLKSMAHFYF 201

Query: 201 GNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTA 260
            N      + Y  D +  DR W P   + Q    + +T  ++   S   N  P+ + QTA
Sbjct: 202 TNSDEA--IRYPEDVY--DRVWMP---YSQPEWTQINTTRNVSGFSDGYN-PPQGVIQTA 253

Query: 261 LVSTDSQPDLQYTMDVDPNRNYS-IWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVV 319
            + T+    L +T +++ + + +  +L FAEI         R F IL N      GVD +
Sbjct: 254 SIPTNGSEPLTFTWNLESSDDETYAYLFFAEIQQLKVN-ETREFKILAN------GVDYI 306

Query: 320 KMSGDRYTALVLNT--TVAVNGRTLTVTLH--PKGGSHAIINAIEVFEIIAVESKTLPEE 375
             +  ++ A  L+    +   G    V L   PK     ++NAIE+F +I          
Sbjct: 307 DYTPWKFEARTLSNPAPLKCEGGVCRVQLSKTPKSTLPPLMNAIEIFSVIQF-------- 358

Query: 376 GSPPSSGLFTAEQCIFRKFEYFYVL 400
              P S   T E    +K +  Y L
Sbjct: 359 ---PQSDTNTDEVIAIKKIQSTYQL 380





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|O81069|Y2899_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1 Back     alignment and function description
>sp|Q8L4H4|NORK_MEDTR Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2 Back     alignment and function description
>sp|C0LGG6|Y5189_ARATH Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2 Back     alignment and function description
>sp|Q9SNA3|Y3463_ARATH Putative receptor-like protein kinase At3g46340 OS=Arabidopsis thaliana GN=At3g46340 PE=3 SV=1 Back     alignment and function description
>sp|Q9FZB1|Y5188_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZQQ7|Y2144_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 OS=Arabidopsis thaliana GN=At2g14440 PE=1 SV=1 Back     alignment and function description
>sp|Q9FN94|RLK7_ARATH Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1 Back     alignment and function description
>sp|C0LGR6|Y4291_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2 Back     alignment and function description
>sp|Q8LKZ1|NORK_PEA Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query408
224079175 596 predicted protein [Populus trichocarpa] 0.852 0.583 0.795 1e-168
449457751 621 PREDICTED: putative leucine-rich repeat 0.919 0.603 0.741 1e-166
359483663 624 PREDICTED: putative leucine-rich repeat 0.865 0.565 0.779 1e-166
449511662 621 PREDICTED: putative leucine-rich repeat 0.919 0.603 0.736 1e-164
255536757 629 serine-threonine protein kinase, plant-t 0.919 0.596 0.727 1e-164
449457749 625 PREDICTED: putative leucine-rich repeat 0.860 0.561 0.760 1e-161
6560758 697 F3M18.23 [Arabidopsis thaliana] 0.924 0.540 0.729 1e-161
15217901 626 receptor like protein 4 [Arabidopsis tha 0.924 0.602 0.729 1e-161
449511656 625 PREDICTED: putative leucine-rich repeat 0.860 0.561 0.757 1e-160
356549305 625 PREDICTED: putative leucine-rich repeat 0.914 0.596 0.691 1e-157
>gi|224079175|ref|XP_002305781.1| predicted protein [Populus trichocarpa] gi|222848745|gb|EEE86292.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 277/348 (79%), Positives = 311/348 (89%)

Query: 28  MRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPENCY 87
           MRISCGAR N+H+ PTNTLW+KDFAYTGGIPANATRPS+I+PPLKTLRYFPLS GP NCY
Sbjct: 1   MRISCGARLNVHTAPTNTLWYKDFAYTGGIPANATRPSYISPPLKTLRYFPLSSGPNNCY 60

Query: 88  IINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVF 147
            INRVPKGHY VR+FFGL    +FD+EPLFDIS+EGTQIYSLKSGW++HDD+ F EALVF
Sbjct: 61  NINRVPKGHYTVRVFFGLDGHRNFDNEPLFDISIEGTQIYSLKSGWTNHDDQVFTEALVF 120

Query: 148 LRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKF 207
           L DGT SICFHSTGHGDPAILS+EILQ++D+AYYFG  W +G+ILRTA RLSCGNGKPKF
Sbjct: 121 LTDGTASICFHSTGHGDPAILSIEILQMEDRAYYFGPAWVQGIILRTAARLSCGNGKPKF 180

Query: 208 DVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQ 267
           DVDYSGDHWGGDRFW+PI +FGQ +D  RSTES IK+AS APN+YPEALYQTALVSTD+Q
Sbjct: 181 DVDYSGDHWGGDRFWSPIKTFGQGSDLARSTESGIKKASNAPNYYPEALYQTALVSTDTQ 240

Query: 268 PDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYT 327
           PDL YTMDVDPNRNYSIWLHFAEID+++T  G+RVFDILING +AF+ VD+VKMSGDRYT
Sbjct: 241 PDLAYTMDVDPNRNYSIWLHFAEIDSSVTAAGKRVFDILINGVVAFEDVDIVKMSGDRYT 300

Query: 328 ALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKTLPEE 375
           ALVLNTTV V+GR LT+ LHPK GSHAIINAIEVFEI+  ESKT  EE
Sbjct: 301 ALVLNTTVTVSGRILTIGLHPKEGSHAIINAIEVFEILTAESKTSLEE 348




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457751|ref|XP_004146611.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|359483663|ref|XP_002279791.2| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Vitis vinifera] gi|297740416|emb|CBI30598.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449511662|ref|XP_004164020.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255536757|ref|XP_002509445.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223549344|gb|EEF50832.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449457749|ref|XP_004146610.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like isoform 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|6560758|gb|AAF16758.1|AC010155_11 F3M18.23 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15217901|ref|NP_174156.1| receptor like protein 4 [Arabidopsis thaliana] gi|332192839|gb|AEE30960.1| receptor like protein 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449511656|ref|XP_004164019.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like isoform 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356549305|ref|XP_003543034.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query408
TAIR|locus:2032221 626 RLP4 "receptor like protein 4" 0.924 0.602 0.729 1.5e-152
TAIR|locus:2031175 628 AT1G25570 [Arabidopsis thalian 0.879 0.571 0.352 9.5e-50
TAIR|locus:2083023 517 AT3G05990 [Arabidopsis thalian 0.830 0.655 0.300 5.9e-22
TAIR|locus:2075316470 AT3G46270 "AT3G46270" [Arabido 0.838 0.727 0.279 2.3e-13
TAIR|locus:2055165 868 AT2G14510 [Arabidopsis thalian 0.848 0.398 0.245 6.9e-12
TAIR|locus:2057991 934 AT2G37050 [Arabidopsis thalian 0.678 0.296 0.280 7.7e-12
TAIR|locus:2066158 884 AT2G28990 [Arabidopsis thalian 0.659 0.304 0.271 9.1e-12
TAIR|locus:2094103 519 AT3G19230 [Arabidopsis thalian 0.830 0.653 0.232 1.8e-11
TAIR|locus:2195830 837 AT1G51870 [Arabidopsis thalian 0.845 0.412 0.240 2.4e-11
TAIR|locus:2075326471 AT3G46280 "AT3G46280" [Arabido 0.779 0.675 0.255 9e-11
TAIR|locus:2032221 RLP4 "receptor like protein 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1488 (528.9 bits), Expect = 1.5e-152, P = 1.5e-152
 Identities = 275/377 (72%), Positives = 316/377 (83%)

Query:     1 MLRFHFLWLLVFCSALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPAN 60
             MLRF    LL+   +L SS AR AP+A+RISCGAR+N+ +PPT  LWFKD AYTGG+PAN
Sbjct:     2 MLRFILASLLLSSFSLYSSLARPAPYALRISCGARKNVRTPPTYALWFKDIAYTGGVPAN 61

Query:    61 ATRPSFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDIS 120
             AT P++ITPPLKTLRYFP+SEGP NCY I RVPKGHY+VRIFFGLV   SFD EPLFDIS
Sbjct:    62 ATTPTYITPPLKTLRYFPISEGPNNCYNIVRVPKGHYSVRIFFGLVDQPSFDKEPLFDIS 121

Query:   121 VEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAY 180
             +EGTQI SLKSGWS  DD+ FAEAL+FL  GT +ICFHSTGHGDPAILS+EILQVDDKAY
Sbjct:   122 IEGTQISSLKSGWSSQDDQVFAEALIFLLGGTATICFHSTGHGDPAILSIEILQVDDKAY 181

Query:   181 YFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTES 240
              FG+GWG+G+ILRTATRL+CG GK +FD DY GDHWGGDRFWN + SFG++AD  RSTE 
Sbjct:   182 SFGEGWGQGVILRTATRLTCGTGKSRFDEDYRGDHWGGDRFWNRMRSFGKSADSPRSTEE 241

Query:   241 SIKQASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQ 300
             +IK+AS +PNFYPE LYQ+ALVSTD QPDL Y++DV+PNRNYS+WLHFAEIDNTIT  G+
Sbjct:   242 TIKKASVSPNFYPEGLYQSALVSTDDQPDLTYSLDVEPNRNYSVWLHFAEIDNTITAEGK 301

Query:   301 RVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIE 360
             RVFD++INGD  F+ VD++KMSG RY ALVLN TV V+GRTLTV L PK G HAIINAIE
Sbjct:   302 RVFDVVINGDTFFEDVDIIKMSGGRYAALVLNATVTVSGRTLTVVLQPKAGGHAIINAIE 361

Query:   361 VFEIIAVESKTLPEEGS 377
             VFEII  E KTL +E S
Sbjct:   362 VFEIITAEFKTLRDEVS 378




GO:0005886 "plasma membrane" evidence=ISM
GO:0007165 "signal transduction" evidence=IC
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2031175 AT1G25570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083023 AT3G05990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075316 AT3G46270 "AT3G46270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055165 AT2G14510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057991 AT2G37050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2066158 AT2G28990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094103 AT3G19230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195830 AT1G51870 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075326 AT3G46280 "AT3G46280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00040482
hypothetical protein (596 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query408
PLN03150 623 PLN03150, PLN03150, hypothetical protein; Provisio 0.0
pfam12819335 pfam12819, Malectin_like, Carbohydrate-binding pro 1e-70
pfam11721164 pfam11721, Malectin, Di-glucose binding within end 2e-16
>gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional Back     alignment and domain information
 Score =  690 bits (1782), Expect = 0.0
 Identities = 284/371 (76%), Positives = 319/371 (85%), Gaps = 2/371 (0%)

Query: 7   LWLLVFCS--ALNSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRP 64
           LWLL   +  A+ +S A   PF MRISCGAR N+ + PTNTLW+KDFAYTGGIPANATRP
Sbjct: 3   LWLLAASALLAVLASLASPEPFTMRISCGARVNVRTAPTNTLWYKDFAYTGGIPANATRP 62

Query: 65  SFITPPLKTLRYFPLSEGPENCYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGT 124
           SFI PPLKTLRYFPLS+GPENCY INRVPKGHY+VR+FFGLV   +FD EPLFD+SVEGT
Sbjct: 63  SFIAPPLKTLRYFPLSDGPENCYNINRVPKGHYSVRVFFGLVAEPNFDSEPLFDVSVEGT 122

Query: 125 QIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDPAILSLEILQVDDKAYYFGQ 184
           QI SLKSGWS HD++ FAEALVFL DG+ SICFHSTGHGDPAILS+EILQVDDKAY FG 
Sbjct: 123 QISSLKSGWSSHDEQVFAEALVFLTDGSASICFHSTGHGDPAILSIEILQVDDKAYNFGP 182

Query: 185 GWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQ 244
            WG+G+ILRTA RLSCG GK KFD DYSGDHWGGDRFWN + +FG  +DQ  STE+ IK+
Sbjct: 183 SWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKK 242

Query: 245 ASKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFD 304
           AS APNFYPE+LYQ+ALVSTD+QPDL YTMDVDPNRNYS+WLHFAEIDN+IT  G+RVFD
Sbjct: 243 ASNAPNFYPESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFD 302

Query: 305 ILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEI 364
           +LINGD AF+ VD+VKMSG+RYTALVLN TVAV+GRTLT+ L PK G+HAIINAIEVFEI
Sbjct: 303 VLINGDTAFKDVDIVKMSGERYTALVLNKTVAVSGRTLTIVLQPKKGTHAIINAIEVFEI 362

Query: 365 IAVESKTLPEE 375
           I  ESKTL EE
Sbjct: 363 ITAESKTLLEE 373


Length = 623

>gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER Back     alignment and domain information
>gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 408
PLN03150 623 hypothetical protein; Provisional 100.0
PF12819347 Malectin_like: Carbohydrate-binding protein of the 100.0
PF11721174 Malectin: Di-glucose binding within endoplasmic re 99.88
PF11721174 Malectin: Di-glucose binding within endoplasmic re 99.67
PLN03150623 hypothetical protein; Provisional 99.43
PF12819 347 Malectin_like: Carbohydrate-binding protein of the 99.23
KOG3593355 consensus Predicted receptor-like serine/threonine 98.04
KOG3593355 consensus Predicted receptor-like serine/threonine 91.63
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information
Probab=100.00  E-value=1.3e-77  Score=639.18  Aligned_cols=371  Identities=77%  Similarity=1.270  Sum_probs=317.6

Q ss_pred             HHHHHHHHh--hhccccCCCceEEEccCCCCCCcCCCCCceeecCCCCcCCccccccCCCCCCCcceeeeeeCCCCCCCc
Q 015373            8 WLLVFCSAL--NSSSARHAPFAMRISCGARQNIHSPPTNTLWFKDFAYTGGIPANATRPSFITPPLKTLRYFPLSEGPEN   85 (408)
Q Consensus         8 ~~~~~~~~~--~~~~a~~~~~~i~IdCG~~~~~~~d~~g~~w~~D~~~~~g~~~~~~~~~~~~~~y~T~R~F~~~~g~~~   85 (408)
                      |||++|+.+  .++.++.++++++||||++++..+|.+||+|++|..++.|..+....++...++|+|+|+||.++|+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~~~~~~~~~~~~~~~~~~~~~t~R~F~~~~g~~~   83 (623)
T PLN03150          4 WLLAASALLAVLASLASPEPFTMRISCGARVNVRTAPTNTLWYKDFAYTGGIPANATRPSFIAPPLKTLRYFPLSDGPEN   83 (623)
T ss_pred             HHHHHHHHHHhhcccccCCCccEEEeCCCCCCcccCCCCCEEcCCcccccCccccccCcccccchhhccccCCccccccc
Confidence            444444444  334456788999999999987645568999999988766655544445445678999999997679999


Q ss_pred             eEEEeecCCceEEEEEEEecccCCCCCCCCeEEEEECCeEEEEEecCCCCCCCcEEEEEEEEeeCCeEEEEEeeCCCCCc
Q 015373           86 CYIINRVPKGHYNVRIFFGLVTLTSFDHEPLFDISVEGTQIYSLKSGWSDHDDRAFAEALVFLRDGTVSICFHSTGHGDP  165 (408)
Q Consensus        86 cY~~pv~~~g~ylVRl~F~~~nyd~~~~~~~Fdv~i~~~~w~tvl~~f~~~~~~~~~E~i~~~~~~~l~vcf~~~~~~~p  165 (408)
                      ||+||++++|+|+||+||+||+||+.+..|.|||++|++.|.+|+.+|+..+..++||++++++++.++|||++++.+.|
T Consensus        84 cY~~~~~~~g~ylVRl~F~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~~~~~v~~E~i~~~~~~~l~vcf~~~~~~~p  163 (623)
T PLN03150         84 CYNINRVPKGHYSVRVFFGLVAEPNFDSEPLFDVSVEGTQISSLKSGWSSHDEQVFAEALVFLTDGSASICFHSTGHGDP  163 (623)
T ss_pred             ceEeeecCCCcEEEEEEeecCCcCCCCCCCceEEEECcEEEEEEecCcccCCCcEEEEEEEEecCCcEEEEEecCCCCCC
Confidence            99999999999999999999999998889999999999999999998876667799999999999999999999988999


Q ss_pred             eEEEEEEEEcCCcccccCCCCcccceeeeeeeecCCCCCCCCCcCCCCCCCCCCccccCCCCCCCCCccccccccceecC
Q 015373          166 AILSLEILQVDDKAYYFGQGWGEGLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQA  245 (408)
Q Consensus       166 fIsaIEl~~l~~~~y~~~~~~~~~~al~~~~Rin~Gg~~~~~~~~y~~D~~~~DR~W~~d~~~~~~~~~~ist~~~i~~~  245 (408)
                      |||+||||++|+.+|..+++.+.+.+|++++|+||||.+..+.+||++|+|++||+|.+|+.|..+.+..+++...|+++
T Consensus       164 FIs~iEv~~l~~~~y~~~~~~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~~~~~~st~~~I~~~  243 (623)
T PLN03150        164 AILSIEILQVDDKAYNFGPSWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKKA  243 (623)
T ss_pred             ceeEEEEEEcCcccccccccccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCcccCCCcccccccccccccc
Confidence            99999999999999975532234678999999999998776679999999999999999987665556677777778766


Q ss_pred             CCCCCCChHHHHHHhhhcCCCCCceEEEEEeCCCCcEEEEEEEeecccCcCCcceEEEEEEECCEEeecccceeeccCCc
Q 015373          246 SKAPNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDR  325 (408)
Q Consensus       246 ~~~~~~~P~~Vy~TAr~~~~~~~~lty~~~v~~~~~Y~V~LhFaEi~~~~~~~~~R~FdV~ing~~~~~~~di~~~~g~~  325 (408)
                      .+.++.+|+.||||||++.++..+++|.|++++++.|+|||||||++......++|+|+|+|||+.+++++|+...+|+.
T Consensus       244 ~~~~~~~P~~VyqTA~~~~~~~~~lty~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~  323 (623)
T PLN03150        244 SNAPNFYPESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGER  323 (623)
T ss_pred             cCCCccChHHHhhhhccccCCCCceEEEeecCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCc
Confidence            56677899999999999876556899999999999999999999997544567899999999999999999998888877


Q ss_pred             eeEEEEEEEEEecCcEEEEEEeeCCCCCceeeEEEEEEeecCCCCCCCCcccc
Q 015373          326 YTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAIEVFEIIAVESKTLPEEGSP  378 (408)
Q Consensus       326 ~~~~~~~~~v~vs~~~L~I~f~p~~~s~p~lNaiEI~~~~~~~~~T~~~dv~a  378 (408)
                      +.++++++.+.++++.|+|+|+|..+++|+|||||||++.+.+.+|+++|+.|
T Consensus       324 ~~~~~~~~~v~~~~g~l~isl~p~~~s~pilNaiEI~~~~~~~~~t~~~~~~a  376 (623)
T PLN03150        324 YTALVLNKTVAVSGRTLTIVLQPKKGTHAIINAIEVFEIITAESKTLLEEVSA  376 (623)
T ss_pred             ccceEEEeEEeecCCeEEEEEeeCCCCcceeeeeeeeeccccccccCchHHHH
Confidence            78999998888777889999999988889999999999999877888877654



>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] Back     alignment and domain information
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan Back     alignment and domain information
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan Back     alignment and domain information
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] Back     alignment and domain information
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query408
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 3e-27
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 Back     alignment and structure
 Score =  105 bits (264), Expect = 3e-27
 Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 31/187 (16%)

Query: 189 GLILRTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKA 248
           GL  +    ++ G       VD  G H+  D         G+ +D               
Sbjct: 1   GLADKVIWAVNAGGES---HVDVHGIHYRKDPLEG---RVGRASDYGMKLPILR------ 48

Query: 249 PNFYPEALYQTALVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILIN 308
            N   + LYQT   + DS     Y + +     Y + L FAE+        Q+VFD+ +N
Sbjct: 49  SNPEDQVLYQTERYNEDS---FGYDIPIKEEGEYVLVLKFAEVYFA--QSQQKVFDVRVN 103

Query: 309 GDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHP-------------KGGSHAI 355
           G    + +D+    G   TA      +++    L+V                     +  
Sbjct: 104 GHTVVKDLDIFDRVG-HSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPK 162

Query: 356 INAIEVF 362
           + A+ + 
Sbjct: 163 VCALFIM 169


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query408
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 99.96
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 99.88
2w47_A144 Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. 94.93
2vzp_A127 Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS 94.53
2w3j_A145 Carbohydrate binding module; sugar-binding protein 93.46
2w87_A139 Esterase D, XYL-CBM35; plant cell WALL degradation 91.8
2wz8_A156 Cellulosome protein dockerin type I; sugar binding 88.62
2w3j_A145 Carbohydrate binding module; sugar-binding protein 86.52
2w47_A144 Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. 81.29
2wz8_A156 Cellulosome protein dockerin type I; sugar binding 80.72
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Back     alignment and structure
Probab=99.96  E-value=1.6e-29  Score=227.39  Aligned_cols=154  Identities=19%  Similarity=0.219  Sum_probs=116.7

Q ss_pred             eeeeeecCCCCCCCCCcCCCCCCCCCCccccCCCCCCCCCccccccccceecCCCCCCCChHHHHHHhhhcCCCCCceEE
Q 015373          193 RTATRLSCGNGKPKFDVDYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTALVSTDSQPDLQY  272 (408)
Q Consensus       193 ~~~~Rin~Gg~~~~~~~~y~~D~~~~DR~W~~d~~~~~~~~~~ist~~~i~~~~~~~~~~P~~Vy~TAr~~~~~~~~lty  272 (408)
                      ++++||||||+..   .|    ..  +|.|.+|..+...+.... ....+..  ...+.+|+.||||||.+..   +++|
T Consensus         5 ~~~~~INcGg~~~---~d----~~--gr~w~~D~~~~~~g~~~~-~~~~~~~--~~~~~~~~~lY~TaR~~~~---~~tY   69 (174)
T 2jwp_A            5 KVIWAVNAGGESH---VD----VH--GIHYRKDPLEGRVGRASD-YGMKLPI--LRSNPEDQVLYQTERYNED---SFGY   69 (174)
T ss_dssp             HEEEEEEETSSSE---EE----TT--TEEECSSCSSTTCCCCCC-CCTTSCC--SSSCHHHHHTTTCCCCCCS---CEEE
T ss_pred             cEEEEEECCCCCc---cC----CC--CCEEcCCcCcccCCcccc-cccceEe--cccCCCCchhhhhhccCCC---CeEE
Confidence            5789999999753   22    22  688988865431111000 0111111  1123368899999999765   7999


Q ss_pred             EEEeCCCCcEEEEEEEeecccCcCCcceEEEEEEECCEEeecccceeeccCCceeEEEEEEEEEe-------------cC
Q 015373          273 TMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAV-------------NG  339 (408)
Q Consensus       273 ~~~v~~~~~Y~V~LhFaEi~~~~~~~~~R~FdV~ing~~~~~~~di~~~~g~~~~~~~~~~~v~v-------------s~  339 (408)
                      .|+++++|+|+|||||||+..  .+.++|+|||+|||++++++|||.+++|+ .+++.+++.+.+             .+
T Consensus        70 ~f~v~~~G~Y~VrLhF~ei~~--~~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~~~~~~v~~~~l~i~~~~~~~~  146 (174)
T 2jwp_A           70 DIPIKEEGEYVLVLKFAEVYF--AQSQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDEIIPISIKKGKLSVQGEVSTFT  146 (174)
T ss_dssp             EEECCSCEEEEEEEEEECCSC--CCSSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEEEEEEEEETTEEEETTEEEECC
T ss_pred             EEEeCCCeEEEEEEEEecccc--CCCCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEEEEEEEEecCceeeeeeecccC
Confidence            999998999999999999975  46899999999999999999999998886 567777776653             56


Q ss_pred             cEEEEEEeeCCCCCceeeEEEEEEe
Q 015373          340 RTLTVTLHPKGGSHAIINAIEVFEI  364 (408)
Q Consensus       340 ~~L~I~f~p~~~s~p~lNaiEI~~~  364 (408)
                      ++|+|+|.|.....|+||||||++.
T Consensus       147 g~L~I~f~p~~~~~a~inaIEI~~~  171 (174)
T 2jwp_A          147 GKLSVEFVKGYYDNPKVCALFIMKG  171 (174)
T ss_dssp             SEEEEEEECSSSCSSSEEEEEEESS
T ss_pred             CeEEEEEeccCCCCcEEEEEEEEeC
Confidence            7899999997666899999999985



>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Back     alignment and structure
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A Back     alignment and structure
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* Back     alignment and structure
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} Back     alignment and structure
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A Back     alignment and structure
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} Back     alignment and structure
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} Back     alignment and structure
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A Back     alignment and structure
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query408
d2o14a1146 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.55
d2o14a1146 Hypothetical protein YxiM {Bacillus subtilis [TaxI 97.41
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: YxiM N-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]
Probab=98.55  E-value=9.1e-08  Score=80.66  Aligned_cols=80  Identities=14%  Similarity=0.276  Sum_probs=62.1

Q ss_pred             ceEEEEEeCCCCcEEEEEEEeecccCcCCcceEEEEEEECCEEeecccceeeccCCceeEEEEEEEEEecCcEEEEEEee
Q 015373          269 DLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILINGDIAFQGVDVVKMSGDRYTALVLNTTVAVNGRTLTVTLHP  348 (408)
Q Consensus       269 ~lty~~~v~~~~~Y~V~LhFaEi~~~~~~~~~R~FdV~ing~~~~~~~di~~~~g~~~~~~~~~~~v~vs~~~L~I~f~p  348 (408)
                      ...|.+++ |+|.|.|.+++.|..         ..++.++|...+..+     .|..   ..+.+.|++++|+|+|.|..
T Consensus        64 ~~~f~v~v-PnG~Y~Vtv~~Gd~~---------~~~~~~eg~~~~~~~-----~g~~---~~~~~~V~VtDG~L~l~ft~  125 (146)
T d2o14a1          64 NNTFNVDL-PNGLYEVKVTLGNTA---------RASVAAEGVFQVINM-----TGDG---AEDTFQIPVTDGQLNLLVTE  125 (146)
T ss_dssp             SCCEEEEC-CSEEEEEEEEESSCS---------EEEEEETTEEEEEEE-----ESTT---CEEEEEEEECSSEEEEEEEE
T ss_pred             CceEEEEC-CCCeEEEEEEEecCC---------CccEEEeeEEecccc-----CCcc---EEEEEEEEEECCeEEEEEec
Confidence            35899998 899999999999832         247888998766554     4442   24567788999999999975


Q ss_pred             C-CCCCceeeEEEEEEeec
Q 015373          349 K-GGSHAIINAIEVFEIIA  366 (408)
Q Consensus       349 ~-~~s~p~lNaiEI~~~~~  366 (408)
                      . .+.+|.||+|||-++.+
T Consensus       126 ~~~G~~~~in~l~I~~~~d  144 (146)
T d2o14a1         126 GKAGTAFTLSALKIKKLSD  144 (146)
T ss_dssp             SSTTSCCEEEEEEEEEEES
T ss_pred             CCCCCccEEEEEEEEeccc
Confidence            4 45689999999999865



>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure