Citrus Sinensis ID: 015433

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------
MADRFFPNEMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL
cccccccccccccHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccccccccc
ccccccccccccccHHHHHcccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccEHHccccEEEcHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccccc
madrffpnempetsLAVAAHETTTAQDSLTKLlslpytavsDTLKNSALALKQTVVNetwgvsgkrvqdytLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEAcdsasrdsgrvtFICGRAGVCALGAVLAKHAGDERLLDHYLTKfkeiklpsdlpnellygRVGFLWACSFLnkhmgkdtiSTAQMRAVVDEIIKAGRRlanrgrcplmyewhgkkywgaahGLAGIMHVLMDmelkpdeveDVKGTLRYMIknrfpsgnypssegsesdrlvhwchgapgVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRvgichgisgnTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEgkmhggdrpyslfegiggmTHLFldmiepsearfpayel
madrffpnempETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTvvnetwgvsgkrvqDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKnrfpsgnypsSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL
MADRFFPNEMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL
****************************LTKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKN****************RLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMI************
*ADRFFPNEMPETSLAV************TKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL
********EMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSG***********RLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL
***RFFPNEMPETSLAVAAH**TTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MADRFFPNEMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query407 2.2.26 [Sep-21-2011]
Q9JJK2450 LanC-like protein 2 OS=Mu yes no 0.975 0.882 0.402 1e-76
Q9NS86450 LanC-like protein 2 OS=Ho yes no 0.882 0.797 0.408 8e-74
O43813399 LanC-like protein 1 OS=Ho no no 0.950 0.969 0.372 4e-66
O89112399 LanC-like protein 1 OS=Mu no no 0.955 0.974 0.362 6e-66
Q9QX69399 LanC-like protein 1 OS=Ra no no 0.955 0.974 0.364 5e-65
Q90ZL2405 LanC-like protein 1 OS=Da no no 0.943 0.948 0.352 1e-62
Q9Y0Y7419 LanC-like protein 3 homol yes no 0.864 0.840 0.317 3e-54
Q29HZ1420 LanC-like protein 3 homol no no 0.707 0.685 0.354 6e-51
Q6ZV70420 LanC-like protein 3 OS=Ho no no 0.800 0.776 0.343 1e-50
Q8CD19420 LanC-like protein 3 OS=Mu no no 0.800 0.776 0.337 2e-50
>sp|Q9JJK2|LANC2_MOUSE LanC-like protein 2 OS=Mus musculus GN=Lancl2 PE=1 SV=1 Back     alignment and function desciption
 Score =  287 bits (734), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/437 (40%), Positives = 244/437 (55%), Gaps = 40/437 (9%)

Query: 1   MADRFFPNEMPETSLAVAAHETTTAQDSLT-KLLSLPYTA------------VSDTLKNS 47
           M +R FPN  P+   A +A          T ++  LP T             V + +K  
Sbjct: 18  MEERSFPNPFPDYEAAASAAGLAAGSAEETGRVCPLPTTEDPGLPFHPNGKIVPNFIKRI 77

Query: 48  ALALKQTVVNETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACD 107
              +K  +     G+      D + YTG  G A L  + Y+VT +   L    D V+   
Sbjct: 78  QTKIKDLLQQMEEGLKTADPHDCSAYTGWTGIALLYLQLYRVTGDQTYLLRSLDYVKR-- 135

Query: 108 SASRDSGR-VTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIK-----LPSDLPNE 161
           +    SGR VTF+CG AG  A+GAV+      E      +TK  ++        S+LP+E
Sbjct: 136 TLRNLSGRRVTFLCGDAGPLAVGAVIYHKLKSECESQECITKLLQMHRTIVCQESELPDE 195

Query: 162 LLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGR----CPLMYEWH 217
           LLYGR G+L+A  +LN  +G  T+    ++ VV  II++G+ L+   R    CPL+Y+WH
Sbjct: 196 LLYGRAGYLYALLYLNTEIGPGTVGETAIKEVVSAIIESGKSLSREERKSERCPLLYQWH 255

Query: 218 GKKYWGAAHGLAGIMHVLMDMELKPDE---VEDVKGTLRYMIKNRFPSGNYPSSEGSESD 274
            K+Y GAAHG+AGI ++LM  E K D+    E VK ++ Y+   +F SGNYPSS  +E+D
Sbjct: 256 RKQYVGAAHGMAGIYYMLMQPEAKVDQETLTEMVKPSIDYVRHKKFRSGNYPSSLSNETD 315

Query: 275 RLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKR-VGICHGISGNTY 333
           RLVHWCHGAPGV   L +A +VF E+++L+ A++  +V+W+RGLL++  GICHG SGN Y
Sbjct: 316 RLVHWCHGAPGVIHVLLQAYQVFKEEKYLKEAMECSDVIWQRGLLRKGYGICHGTSGNGY 375

Query: 334 VFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHG---GDRPYSLFEGIGGMTHL 390
            FLSLYRLT + +YLYRA  FA +  D           HG    DRPYSLFEG+ G  H 
Sbjct: 376 SFLSLYRLTQDKKYLYRACKFAEWCLDYG--------AHGCRIPDRPYSLFEGMAGAVHF 427

Query: 391 FLDMIEPSEARFPAYEL 407
             D++ P  ARFPA+EL
Sbjct: 428 LSDILVPETARFPAFEL 444
Necessary for abscisic acid (ABA) binding on the cell membrane and activation of the ABA signaling pathway in granulocytes.
Mus musculus (taxid: 10090)
>sp|Q9NS86|LANC2_HUMAN LanC-like protein 2 OS=Homo sapiens GN=LANCL2 PE=1 SV=1 Back     alignment and function description
>sp|O43813|LANC1_HUMAN LanC-like protein 1 OS=Homo sapiens GN=LANCL1 PE=1 SV=1 Back     alignment and function description
>sp|O89112|LANC1_MOUSE LanC-like protein 1 OS=Mus musculus GN=Lancl1 PE=1 SV=1 Back     alignment and function description
>sp|Q9QX69|LANC1_RAT LanC-like protein 1 OS=Rattus norvegicus GN=Lancl1 PE=2 SV=2 Back     alignment and function description
>sp|Q90ZL2|LANC1_DANRE LanC-like protein 1 OS=Danio rerio GN=lancl1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y0Y7|LANC3_DROME LanC-like protein 3 homolog OS=Drosophila melanogaster GN=CG2061 PE=1 SV=1 Back     alignment and function description
>sp|Q29HZ1|LANC3_DROPS LanC-like protein 3 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15215 PE=3 SV=1 Back     alignment and function description
>sp|Q6ZV70|LANC3_HUMAN LanC-like protein 3 OS=Homo sapiens GN=LANCL3 PE=2 SV=2 Back     alignment and function description
>sp|Q8CD19|LANC3_MOUSE LanC-like protein 3 OS=Mus musculus GN=Lancl3 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query407
225461385407 PREDICTED: lanC-like protein 2 [Vitis vi 1.0 1.0 0.810 0.0
224128201417 predicted protein [Populus trichocarpa] 0.997 0.973 0.799 0.0
255587364419 catalytic, putative [Ricinus communis] g 1.0 0.971 0.775 0.0
356544018405 PREDICTED: lanC-like protein 2-like [Gly 0.995 1.0 0.773 0.0
449446947412 PREDICTED: lanC-like protein 2-like [Cuc 1.0 0.987 0.740 0.0
146233385443 abscisic acid ABA receptor [Populus tric 0.864 0.794 0.846 1e-178
297853060410 predicted protein [Arabidopsis lyrata su 1.0 0.992 0.726 1e-177
225446932412 PREDICTED: lanC-like protein 2 [Vitis vi 1.0 0.987 0.730 1e-175
147768321412 hypothetical protein VITISV_008093 [Viti 1.0 0.987 0.728 1e-175
145336679410 G protein coupled receptor [Arabidopsis 1.0 0.992 0.704 1e-172
>gi|225461385|ref|XP_002284781.1| PREDICTED: lanC-like protein 2 [Vitis vinifera] gi|302143043|emb|CBI20338.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/407 (81%), Positives = 360/407 (88%)

Query: 1   MADRFFPNEMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETW 60
           MADRFFPNEMPET++         + DSL KLLS PY  +S   + +AL +K  VV ETW
Sbjct: 1   MADRFFPNEMPETAVEAEETSAQNSGDSLIKLLSFPYETLSQQFERAALDVKDAVVRETW 60

Query: 61  GVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFIC 120
            ++GKRVQDY LYTGALGTA+LLFKAYQ+T N ++L +C +IV+ACDSAS  SGRVTFIC
Sbjct: 61  ALAGKRVQDYALYTGALGTAFLLFKAYQITNNRDDLNVCSEIVKACDSASATSGRVTFIC 120

Query: 121 GRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHM 180
           G+AGV A+GAV AKHAGDERLL  YLT+FKEIKLP DLPNELLYGR GFLWACSFLNKH+
Sbjct: 121 GQAGVYAIGAVAAKHAGDERLLGRYLTQFKEIKLPKDLPNELLYGRGGFLWACSFLNKHI 180

Query: 181 GKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMEL 240
           GKDTIS+A+MRA V EIIK+GR +A R RCPLMYEWHGKKYWGAAHGLAG+MHVLM MEL
Sbjct: 181 GKDTISSARMRASVKEIIKSGREMAKRERCPLMYEWHGKKYWGAAHGLAGVMHVLMHMEL 240

Query: 241 KPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEK 300
           KPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGV LTL KAAEVFG+K
Sbjct: 241 KPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVALTLLKAAEVFGDK 300

Query: 301 EFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYD 360
           EFLQAAVDAGEVVW RGLLKRVGICHGISGNTYVFLSLYRLTGNVE+LYRAKAFACFL D
Sbjct: 301 EFLQAAVDAGEVVWNRGLLKRVGICHGISGNTYVFLSLYRLTGNVEFLYRAKAFACFLLD 360

Query: 361 RAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL 407
           RAQ+LI+EGKMHGGDRPYSLFEGIGGMT+LFLDMIEPSEARFP YEL
Sbjct: 361 RAQRLISEGKMHGGDRPYSLFEGIGGMTYLFLDMIEPSEARFPGYEL 407

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224128201|ref|XP_002329106.1| predicted protein [Populus trichocarpa] gi|222869775|gb|EEF06906.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255587364|ref|XP_002534246.1| catalytic, putative [Ricinus communis] gi|223525647|gb|EEF28136.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356544018|ref|XP_003540453.1| PREDICTED: lanC-like protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449446947|ref|XP_004141231.1| PREDICTED: lanC-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|146233385|gb|ABQ14360.1| abscisic acid ABA receptor [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297853060|ref|XP_002894411.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297340253|gb|EFH70670.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225446932|ref|XP_002263345.1| PREDICTED: lanC-like protein 2 [Vitis vinifera] gi|297739117|emb|CBI28768.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147768321|emb|CAN64758.1| hypothetical protein VITISV_008093 [Vitis vinifera] Back     alignment and taxonomy information
>gi|145336679|ref|NP_175700.2| G protein coupled receptor [Arabidopsis thaliana] gi|332194747|gb|AEE32868.1| G protein coupled receptor [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query407
TAIR|locus:2011466410 GPCR "G protein coupled recept 1.0 0.992 0.704 2.5e-159
TAIR|locus:2051449405 GCL2 "GCR2-like 2" [Arabidopsi 0.992 0.997 0.676 7.4e-153
TAIR|locus:2171800433 GCL1 "GCR2-like 1" [Arabidopsi 0.835 0.785 0.474 7.7e-87
MGI|MGI:1919085450 Lancl2 "LanC (bacterial lantib 0.886 0.802 0.429 1.4e-71
RGD|1310809450 Lancl2 "LanC lantibiotic synth 0.886 0.802 0.426 1.8e-71
UNIPROTKB|I3LIW1412 LANCL2 "Uncharacterized protei 0.813 0.803 0.451 4.8e-71
UNIPROTKB|Q9NS86450 LANCL2 "LanC-like protein 2" [ 0.818 0.74 0.440 5.5e-70
UNIPROTKB|A6QPG6433 LANCL2 "Uncharacterized protei 0.960 0.903 0.397 1.1e-69
UNIPROTKB|F1PEY8366 LANCL2 "Uncharacterized protei 0.813 0.904 0.440 3.8e-69
UNIPROTKB|E1C3R4455 LANCL2 "Uncharacterized protei 0.813 0.727 0.432 1e-68
TAIR|locus:2011466 GPCR "G protein coupled receptor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1552 (551.4 bits), Expect = 2.5e-159, P = 2.5e-159
 Identities = 289/410 (70%), Positives = 345/410 (84%)

Query:     1 MADRFFPNEMPE---TSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVN 57
             M +RFF NEMPE     L+      T  +DSLTKLLSLPY + S+ L   AL++K  VV 
Sbjct:     1 MGERFFRNEMPEFVPEDLSGEEETVTECKDSLTKLLSLPYKSFSEKLHRYALSIKDKVVW 60

Query:    58 ETWGVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVT 117
             ETW  SGKRV+DY LYTG LGTAYLLFK+YQVT+N+++LKLC + VEACD ASRDS RVT
Sbjct:    61 ETWERSGKRVRDYNLYTGVLGTAYLLFKSYQVTRNEDDLKLCLENVEACDVASRDSERVT 120

Query:   118 FICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLN 177
             FICG AGVCALGAV AK  GD++L D YL +F+ I+LPSDLP ELLYGR G+LWAC FLN
Sbjct:   121 FICGYAGVCALGAVAAKCLGDDQLYDRYLARFRGIRLPSDLPYELLYGRAGYLWACLFLN 180

Query:   178 KHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMD 237
             KH+G+++IS+ +MR+VV+EI +AGR+L N+G CPLMYEWHGK+YWGAAHGLAGIM+VLM 
Sbjct:   181 KHIGQESISSERMRSVVEEIFRAGRQLGNKGTCPLMYEWHGKRYWGAAHGLAGIMNVLMH 240

Query:   238 MELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVF 297
              EL+PDE++DVKGTL YMI+NRFPSGNY SSEGS+SDRLVHWCHGAPGV LTL KAA+V+
Sbjct:   241 TELEPDEIKDVKGTLSYMIQNRFPSGNYLSSEGSKSDRLVHWCHGAPGVALTLVKAAQVY 300

Query:   298 GEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACF 357
               KEF++AA++AGEVVW RGLLKRVGICHGISGNTYVFLSLYRLT N +YLYRAKAFA F
Sbjct:   301 NTKEFVEAAMEAGEVVWSRGLLKRVGICHGISGNTYVFLSLYRLTRNPKYLYRAKAFASF 360

Query:   358 LYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL 407
             L D+++KLI+EG+MHGGDRP+SLFEGIGGM ++ LDM +P++A FP YEL
Sbjct:   361 LLDKSEKLISEGQMHGGDRPFSLFEGIGGMAYMLLDMNDPTQALFPGYEL 410
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
GO:0009787 "regulation of abscisic acid mediated signaling pathway" evidence=IMP
GO:0010231 "maintenance of seed dormancy" evidence=IMP
GO:0010427 "abscisic acid binding" evidence=IDA
GO:0019898 "extrinsic to membrane" evidence=ISS
TAIR|locus:2051449 GCL2 "GCR2-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171800 GCL1 "GCR2-like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1919085 Lancl2 "LanC (bacterial lantibiotic synthetase component C)-like 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1310809 Lancl2 "LanC lantibiotic synthetase component C-like 2 (bacterial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|I3LIW1 LANCL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NS86 LANCL2 "LanC-like protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A6QPG6 LANCL2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEY8 LANCL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1C3R4 LANCL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9JJK2LANC2_MOUSENo assigned EC number0.40270.97540.8822yesno
Q9Y0Y7LANC3_DROMENo assigned EC number0.31700.86480.8400yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00027635001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (407 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query407
cd04794343 cd04794, euk_LANCL, eukaryotic Lanthionine synthet 1e-136
pfam05147352 pfam05147, LANC_like, Lanthionine synthetase C-lik 1e-115
cd04434343 cd04434, LanC_like, LanC-like proteins 2e-71
cd04792825 cd04792, LanM-like, LanM-like proteins 2e-22
TIGR03897931 TIGR03897, lanti_2_LanM, type 2 lantibiotic biosyn 4e-15
cd04793382 cd04793, LanC, LanC is the cyclase enzyme of the l 7e-10
cd04793382 cd04793, LanC, LanC is the cyclase enzyme of the l 0.003
>gnl|CDD|240111 cd04794, euk_LANCL, eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information 
 Score =  392 bits (1008), Expect = e-136
 Identities = 162/347 (46%), Positives = 224/347 (64%), Gaps = 20/347 (5%)

Query: 73  YTGALGTAYLLFKAYQV----TKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCAL 128
           YTGA G AYL  + Y+V    T +   L    + ++A   A  D  R++F+CG AGV A+
Sbjct: 1   YTGAAGIAYLFLQLYEVPPLLTNDQTYLSWALEYIKASLRAIPDDRRISFLCGNAGVYAV 60

Query: 129 GAVLAKHAGDERLLDHYLTKFKEI-----KLPSDLPNELLYGRVGFLWACSFLNKHMGKD 183
           GA +  +  DE  +D +L+KF ++        S LP+ELLYGR G+L+A  FLNK  G  
Sbjct: 61  GAAVYHYLKDEDEVDEFLSKFLQLLESVVSPDSGLPDELLYGRAGYLYALLFLNKKFGFK 120

Query: 184 TISTAQMRAVVDEIIKAGRRLA--NRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMD---M 238
            I ++ ++++ D I+++GR  A   R  CPLMYEWHGK+Y GAAHGLAGI+++L+     
Sbjct: 121 KIPSSLIKSICDAILESGRTGAAKYRAPCPLMYEWHGKEYLGAAHGLAGILYILLQTPLF 180

Query: 239 ELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSES-DRLVHWCHGAPGVTLTLAKAAEVF 297
            LKP     +K +L Y++  +FPSGN+PSS G+   DRLV WCHGAPG+   LAKA  VF
Sbjct: 181 LLKPSLAPLIKRSLDYLLSLQFPSGNFPSSLGNRKRDRLVQWCHGAPGIVYLLAKAYLVF 240

Query: 298 GEKEFLQAAVDAGEVVWKRGLLKRV-GICHGISGNTYVFLSLYRLTGNVEYLYRAKAFAC 356
            E+++L+AA+  GE++WKRGLLK+  G+CHGI+GN Y FL LYRLTG+++YLYRA  FA 
Sbjct: 241 KEEQYLEAAIKCGELIWKRGLLKKGPGLCHGIAGNAYAFLLLYRLTGDLKYLYRACKFAE 300

Query: 357 FLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFP 403
           FL +   K  A       DRP+SLFEG+ G      D+++P +A FP
Sbjct: 301 FLINYGFKNGA----RIPDRPFSLFEGLAGTACFLADLLQPRQAGFP 343

This family contains the lanthionine synthetase C-like proteins 1 and 2 which are related to the bacterial lanthionine synthetase components C (LanC). LANCL1 and LANCL2 (testes-specific adriamycin sensitivity protein) are thought to be peptide-modifying enzyme components in eukaryotic cells. Both proteins are produced in large quantities in the brain and testes and may have role in the immune surveillance of these organs. Length = 343
>gnl|CDD|218467 pfam05147, LANC_like, Lanthionine synthetase C-like protein Back     alignment and domain information
>gnl|CDD|239881 cd04434, LanC_like, LanC-like proteins Back     alignment and domain information
>gnl|CDD|240109 cd04792, LanM-like, LanM-like proteins Back     alignment and domain information
>gnl|CDD|234385 TIGR03897, lanti_2_LanM, type 2 lantibiotic biosynthesis protein LanM Back     alignment and domain information
>gnl|CDD|240110 cd04793, LanC, LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>gnl|CDD|240110 cd04793, LanC, LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 407
KOG2787403 consensus Lanthionine synthetase C-like protein 1 100.0
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 100.0
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 100.0
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 100.0
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 100.0
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 100.0
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 100.0
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 100.0
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 99.94
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 99.94
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 99.92
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 99.91
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 99.9
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 99.83
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 99.77
KOG2787403 consensus Lanthionine synthetase C-like protein 1 99.75
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 97.65
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.87
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 96.86
COG1331667 Highly conserved protein containing a thioredoxin 96.59
PF07944 520 DUF1680: Putative glycosyl hydrolase of unknown fu 96.46
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.04
PF07944 520 DUF1680: Putative glycosyl hydrolase of unknown fu 95.07
COG1331 667 Highly conserved protein containing a thioredoxin 94.87
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 94.76
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 94.71
TIGR02474290 pec_lyase pectate lyase, PelA/Pel-15E family. Memb 94.67
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 93.96
PF09492289 Pec_lyase: Pectic acid lyase; InterPro: IPR012669 92.54
PF03663 370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 90.13
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 88.53
PLN02993763 lupeol synthase 87.99
PF13243109 Prenyltrans_1: Prenyltransferase-like; PDB: 3SDR_A 87.4
TIGR02474290 pec_lyase pectate lyase, PelA/Pel-15E family. Memb 86.72
PF09492289 Pec_lyase: Pectic acid lyase; InterPro: IPR012669 85.64
PF07221 346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 85.63
KOG2430 587 consensus Glycosyl hydrolase, family 47 [Carbohydr 82.48
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-93  Score=644.00  Aligned_cols=396  Identities=57%  Similarity=1.036  Sum_probs=357.2

Q ss_pred             CCCCCCCCCCCCCchhhhcccccchhhhhhhhccCCchhhHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcHHHH
Q 015433            1 MADRFFPNEMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTA   80 (407)
Q Consensus         1 ~~~r~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ly~G~~Gia   80 (407)
                      |+.|+|+|||||...+...+.   ..++ .+   .+..-+.+.+++.+..++|.+++.+|+..+..+.|.++|+|.+|||
T Consensus         1 me~r~~~np~pd~a~G~~e~~---~~~~-~e---~~~~~~~e~~~r~~~~ikd~~~~~~~~~S~d~~~d~tlYtG~~GiA   73 (403)
T KOG2787|consen    1 MERRAFVNPFPDDASGENETV---GSEP-DE---PTGKLFTEFIKRLATKIKDLVVEMTWGKSGDEVRDGTLYTGWLGIA   73 (403)
T ss_pred             CcccccCCCCcccccCCCccc---cCCC-cc---cccccHHHHHHHHHHHHHHHHHHHHhcccCCCCcCCceeechHHHH
Confidence            899999999999765422110   1011 00   1122256778888889999999999997666699999999999999


Q ss_pred             HHHHHHhhhcCChHHHHHHHHHHHHHHhcCCCCCCceeeCCchHHHHHHHHHHHHcCChhHHHHHHHHhhhccC-CCCCC
Q 015433           81 YLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIKL-PSDLP  159 (407)
Q Consensus        81 l~l~~l~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~G~~Gi~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~  159 (407)
                      ++++++|++|.|..++..|.++++.+.....+..+++|+||.+|++++.+++++.+++++..+.++.++..+.. +++.+
T Consensus        74 fl~~kly~vTrd~~~L~~~~e~Vk~~~~~~~s~~~vTFLCG~aGv~avgAvia~~l~~~~~~~~~l~~f~~l~~~~~dlp  153 (403)
T KOG2787|consen   74 FLYLKLYEVTRDLYDLLLCLEIVKACLVASRSSRRVTFLCGRAGVCAVGAVIAHKLGEEEELDDCLARFLSLRLCSSDLP  153 (403)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHhhccccCceEEECCCcchhHHHHHHHHHhccHHHHHHHHHHHHhcccCCcccc
Confidence            99999999999999999999999999865566778999999999999999999999999999999999888755 77889


Q ss_pred             cccccchhhHHHHHHHHhhHhCCCCCcHHHHHHHHHHHHHHhHHhhhcCC--CCCcccccCCccCCcccchHHHHHHHHc
Q 015433          160 NELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGR--CPLMYEWHGKKYWGAAHGLAGIMHVLMD  237 (407)
Q Consensus       160 ~d~~~G~AG~l~~ll~l~~~~~~~~~~~~~i~~i~~~ii~~~~~~~~~~~--~pl~~~~~~~~~~G~aHG~aGI~~~L~~  237 (407)
                      +|+++|+||++|+++++|++++.++++++.|++|++.|+.+++.++++..  +||||+||+++|+|+|||++||+++|++
T Consensus       154 ~ElLyGRaGYL~a~lflNk~ig~~ti~~~~i~~i~~~I~~sGr~~a~k~~~~cPLmYewhg~~Y~GAAhGLagI~~vLm~  233 (403)
T KOG2787|consen  154 DELLYGRAGYLWACLFLNKYIGQETIPDDDIRSIVQAILTSGRELAKKENSPCPLMYEWHGKRYWGAAHGLAGILYVLMD  233 (403)
T ss_pred             HHHHhhHHHHHHHHHHHHhhcCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhccceehhhhhhHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999987754  9999999999999999999999999999


Q ss_pred             ccCCCch---HHHHHHHHHHHHHcccCCCCCCCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Q 015433          238 MELKPDE---VEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVW  314 (407)
Q Consensus       238 ~~~~~~~---~~~i~~~l~~~~~~~~~~gnwp~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~  314 (407)
                      ....+++   .++++.+++|+++++|++||+|++.+++.|++|+||||+||+++++.+++++|++++|++++.+|.+.||
T Consensus       234 ~~L~~d~~~~~~dVK~sldym~~~rfpsGNyP~s~~~~~drLVhWcHGApGv~~~L~kAy~VF~Eekyl~aa~ecadvVW  313 (403)
T KOG2787|consen  234 PTLKVDQPALLKDVKGSLDYMIQNRFPSGNYPSSEGNKRDRLVHWCHGAPGVAYTLAKAYQVFKEEKYLEAAMECADVVW  313 (403)
T ss_pred             CCCCCcchhHHHhhhhHHHHHHHccCCCCCCCcccCCCcceeeeeccCCchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            8766554   7899999999999999999999999888999999999999999999999999999999999999999999


Q ss_pred             HhCCCCC-CcccccchhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcCccccchHHHHHHHHH
Q 015433          315 KRGLLKR-VGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLD  393 (407)
Q Consensus       315 ~~g~~~~-~~lCHG~aG~~~~ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~sL~~G~aGi~~~Ll~  393 (407)
                      ++|++++ +|+|||+|||+|+||.+||+|+|.+|++||++|++|++++..+   .| .+.+|+|+|||+|+||.+|+|++
T Consensus       314 ~rGlLkkg~GichGvaGNaYvFLsLyRLT~d~kYlyRA~kFae~lld~~~~---~g-~r~pDrpySLfeG~AG~v~~l~D  389 (403)
T KOG2787|consen  314 KRGLLKKGVGICHGVAGNAYVFLSLYRLTGDMKYLYRAKKFAEWLLDYGFS---HG-CRTPDRPYSLFEGVAGTVYLLLD  389 (403)
T ss_pred             HhhhhhcCCcccccccCchhhhHhHHHHcCcHHHHHHHHHHHHHHHhhhhh---cc-CCCCCCChhHHhcccchhhHhhh
Confidence            9999988 9999999999999999999999999999999999999998753   22 35579999999999999999999


Q ss_pred             ccCCCCCCCCCCCC
Q 015433          394 MIEPSEARFPAYEL  407 (407)
Q Consensus       394 l~~p~~~~fp~~~~  407 (407)
                      +++|++++||+|||
T Consensus       390 ll~P~~arFP~~El  403 (403)
T KOG2787|consen  390 LLDPEQARFPGYEL  403 (403)
T ss_pred             hcChhhccCCcCcC
Confidence            99999999999997

>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>PF09492 Pec_lyase: Pectic acid lyase; InterPro: IPR012669 Members of this family are isozymes of pectate lyase (4 Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02993 lupeol synthase Back     alignment and domain information
>PF13243 Prenyltrans_1: Prenyltransferase-like; PDB: 3SDR_A 3SAE_A 3SDV_A 3SDT_A 3SDQ_A 3SDU_A Back     alignment and domain information
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family Back     alignment and domain information
>PF09492 Pec_lyase: Pectic acid lyase; InterPro: IPR012669 Members of this family are isozymes of pectate lyase (4 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>KOG2430 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query407
3e6u_A411 Crystal Structure Of Human Lancl1 Length = 411 4e-67
>pdb|3E6U|A Chain A, Crystal Structure Of Human Lancl1 Length = 411 Back     alignment and structure 
Iteration: 1

 Score =  251 bits (642), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 156/419 (37%), Positives = 231/419 (55%), Gaps = 32/419 (7%)
Query: 1   MADRFFPNEMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETW 60
           MA R FPN   + + ++A      A   LT          S  L N    L Q +     
Sbjct: 13  MAQRAFPNPYADYNKSLA-EGYFDAAGRLT-------PEFSQRLTNKIRELLQQMER--- 61
Query: 61  GVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIV-EACDSASRDSGRVTFI 119
           G+     +D T YTG  G A L    Y V  +   L+L    V ++ +  ++ S  +TF+
Sbjct: 62  GLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRS--ITFL 119
Query: 120 CGRAGVCALGAVLAKHAGDERLLDHYLTKFKEI-KLPSDLPNELLYGRVGFLWACSFLNK 178
           CG AG  A+ AVL     +E+  +  +T+   + K+    PNE+LYGR+G+++A  F+NK
Sbjct: 120 CGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNK 179
Query: 179 HMGKDTISTAQMRAVVDEIIKAGRRLANR----GRCPLMYEWHGKKYWGAAHGLAGIMHV 234
           + G + I  + ++ + + I+ +G  LA +     + PLMYEW+ + Y GAAHGLAGI + 
Sbjct: 180 NFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYY 239
Query: 235 LMDMELKPDEVED---VKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLA 291
           LM   L+  + +    VK ++ Y+ + +FPSGNYP   G   D LVHWCHGAPGV   L 
Sbjct: 240 LMQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLI 299
Query: 292 KAAEVFGEKEFLQAAVDAGEVVWKRGLLKR-VGICHGISGNTYVFLSLYRLTGNVEYLYR 350
           +A +VF E+++L  A    +V+W+ GLLK+  G+CHG +GN Y FL+LY LT +++YLYR
Sbjct: 300 QAYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYR 359
Query: 351 AKAFA--CFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL 407
           A  FA  C  Y        E      D P+SLFEG+ G  +   D++ P++ARFPA+EL
Sbjct: 360 ACKFAEWCLEY-------GEHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 411

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query407
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 1e-117
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 9e-66
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Length = 411 Back     alignment and structure
 Score =  346 bits (888), Expect = e-117
 Identities = 148/416 (35%), Positives = 225/416 (54%), Gaps = 26/416 (6%)

Query: 1   MADRFFPNEMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETW 60
           MA R FPN   + + ++A        +             S  L N    +++ +     
Sbjct: 13  MAQRAFPNPYADYNKSLA--------EGYFDAAGRLTPEFSQRLTN---KIRELLQQMER 61

Query: 61  GVSGKRVQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFIC 120
           G+     +D T YTG  G A L    Y V  +   L+L    V+   +       +TF+C
Sbjct: 62  GLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKR-SITFLC 120

Query: 121 GRAGVCALGAVLAKHAGDERLLDHYLTKFKEI-KLPSDLPNELLYGRVGFLWACSFLNKH 179
           G AG  A+ AVL     +E+  +  +T+   + K+    PNE+LYGR+G+++A  F+NK+
Sbjct: 121 GDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKN 180

Query: 180 MGKDTISTAQMRAVVDEIIKAGRRLANR----GRCPLMYEWHGKKYWGAAHGLAGIMHVL 235
            G + I  + ++ + + I+ +G  LA +     + PLMYEW+ + Y GAAHGLAGI + L
Sbjct: 181 FGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYL 240

Query: 236 MDMELKPDE---VEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAK 292
           M   L+  +      VK ++ Y+ + +FPSGNYP   G   D LVHWCHGAPGV   L +
Sbjct: 241 MQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQ 300

Query: 293 AAEVFGEKEFLQAAVDAGEVVWKRGLLKR-VGICHGISGNTYVFLSLYRLTGNVEYLYRA 351
           A +VF E+++L  A    +V+W+ GLLK+  G+CHG +GN Y FL+LY LT +++YLYRA
Sbjct: 301 AYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRA 360

Query: 352 KAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL 407
             FA +  +       E      D P+SLFEG+ G  +   D++ P++ARFPA+EL
Sbjct: 361 CKFAEWCLEY-----GEHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 411
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Length = 409 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query407
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 100.0
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 100.0
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 99.93
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 99.9
3pmm_A382 Putative cytoplasmic protein; structural genomics, 97.93
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 97.77
3pmm_A 382 Putative cytoplasmic protein; structural genomics, 97.45
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 97.42
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 97.36
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 97.18
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 97.16
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 97.07
1nc5_A373 Hypothetical protein YTER; structural genomics, he 97.04
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 96.9
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 96.78
1nc5_A373 Hypothetical protein YTER; structural genomics, he 96.16
3k11_A445 Putative glycosyl hydrolase; structural genomics, 96.15
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.98
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.95
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 95.66
3k11_A445 Putative glycosyl hydrolase; structural genomics, 95.55
2gz6_A 388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.5
3h7l_A 586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 89.03
1r76_A408 Pectate lyase; A-helical structure; 2.65A {Azospir 88.63
1fp3_A 402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 87.42
2zbl_A 421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 87.21
1w6k_A732 Lanosterol synthase; cyclase, cholesterol, monotop 82.65
1gxm_A332 Pectate lyase; mechanism, elimination; 1.32A {Cell 81.51
1r76_A 408 Pectate lyase; A-helical structure; 2.65A {Azospir 80.37
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
Probab=100.00  E-value=6.8e-70  Score=539.60  Aligned_cols=390  Identities=38%  Similarity=0.675  Sum_probs=330.9

Q ss_pred             CCCCCCCCCCCCCchhhhcccccchhhhhhhhccCCchhhHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcHHHH
Q 015433            1 MADRFFPNEMPETSLAVAAHETTTAQDSLTKLLSLPYTAVSDTLKNSALALKQTVVNETWGVSGKRVQDYTLYTGALGTA   80 (407)
Q Consensus         1 ~~~r~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ly~G~~Gia   80 (407)
                      |++|||+||||||+++...+....+++        ..++++.++++++.++.+++.++. .  ...+.+.++|+|.+||+
T Consensus        13 ~~~r~~~n~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ll~~~~~~~-~--~~~~~~~~lY~G~~Gia   81 (411)
T 3e6u_A           13 MAQRAFPNPYADYNKSLAEGYFDAAGR--------LTPEFSQRLTNKIRELLQQMERGL-K--SADPRDGTGYTGWAGIA   81 (411)
T ss_dssp             GGGGBCCCCSCCCCHHHHHTTBCTTCC--------BCHHHHHHHHHHHHHHHHHHHHHT-T--TSCTTCCCSSSSHHHHH
T ss_pred             ccCccCCCCCCcccccccccccccccc--------ccHHHHHHHHHHHHHHHHHHHhhc-c--cCCCCCCCeeeChHHHH
Confidence            789999999999997643221111111        124577789999999998875432 2  23788999999999999


Q ss_pred             HHHHHHhhhcCChHHHHHHHHHHHHHHhcCCCCCCceeeCCchHHHHHHHHHHHHcCChhHHHHHHHHhhhcc-CCCCCC
Q 015433           81 YLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEIK-LPSDLP  159 (407)
Q Consensus        81 l~l~~l~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~G~~Gi~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~  159 (407)
                      |+|+++++++++++|++.|.++++.+.+... ...+++++|.+|++++++.+++.+++++..+++++.+.+.. ...+.+
T Consensus        82 ~~l~~l~~~t~d~~yl~~a~~~l~~~~~~l~-~~~~~~~~G~aG~l~~l~~ly~~~g~~~~a~~~~~~l~~~~~~~~~~~  160 (411)
T 3e6u_A           82 VLYLHLYDVFGDPAYLQLAHGYVKQSLNCLT-KRSITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAP  160 (411)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHTTCC-SCCCCTTTSTHHHHHHHHHHHHHTTCHHHHHHHHHHHHGGGGGCTTCC
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc-ccCCccccCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcccccCC
Confidence            9999999999999999999999999876543 45789999999999999999999999877777766665442 344567


Q ss_pred             cccccchhhHHHHHHHHhhHhCCCCCcHHHHHHHHHHHHHHhHHhhhc----CCCCCcccccCCccCCcccchHHHHHHH
Q 015433          160 NELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANR----GRCPLMYEWHGKKYWGAAHGLAGIMHVL  235 (407)
Q Consensus       160 ~d~~~G~AG~l~~ll~l~~~~~~~~~~~~~i~~i~~~ii~~~~~~~~~----~~~pl~~~~~~~~~~G~aHG~aGI~~~L  235 (407)
                      +|+++|+||++++++.+++.++++.+++..+.++++.++++++...+.    ...|+||+|+++.++|+|||++||+++|
T Consensus       161 ~dll~G~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~aHG~aGI~~~L  240 (411)
T 3e6u_A          161 NEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYL  240 (411)
T ss_dssp             SSTTTSHHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTTTSHHHHHHHH
T ss_pred             hhhhcCcHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeecCccCCcccccHHHHHHHH
Confidence            899999999999999999999999988877899999999988765322    2579999999999999999999999999


Q ss_pred             HcccCCCc---hHHHHHHHHHHHHHcccCCCCCCCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHH
Q 015433          236 MDMELKPD---EVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEV  312 (407)
Q Consensus       236 ~~~~~~~~---~~~~i~~~l~~~~~~~~~~gnwp~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~  312 (407)
                      +++....+   ..+.++++++|+++.++++||||+...+..+.+++||||+|||++++..++++++|+++++.++++++.
T Consensus       241 l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~  320 (411)
T 3e6u_A          241 MQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADV  320 (411)
T ss_dssp             TCGGGCCCHHHHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred             HHHHhhcChHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            99875543   357899999999988888899998776666778999999999999999999999999999999999999


Q ss_pred             HHHhCCC-CCCcccccchhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcCccccchHHHHHHH
Q 015433          313 VWKRGLL-KRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLF  391 (407)
Q Consensus       313 ~~~~g~~-~~~~lCHG~aG~~~~ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~sL~~G~aGi~~~L  391 (407)
                      +|++|+. +++|||||.+|++++|+++++.|++++|+++|.+++++++++..     +....++.|+|||+|+|||+++|
T Consensus       321 ~~~~g~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~sL~~G~aGi~~~L  395 (411)
T 3e6u_A          321 IWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE-----HGCRTPDTPFSLFEGMAGTIYFL  395 (411)
T ss_dssp             HHHHCSBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTTS-----SCCCCCSSTTSTTTSHHHHHHHH
T ss_pred             HHhcCccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc-----ccCCCCCCCChhhccHHHHHHHH
Confidence            9999975 56999999999999999999999999999999999998875421     22344678899999999999999


Q ss_pred             HHccCCCCCCCCCCCC
Q 015433          392 LDMIEPSEARFPAYEL  407 (407)
Q Consensus       392 l~l~~p~~~~fp~~~~  407 (407)
                      +|+++|++++||+|||
T Consensus       396 l~l~~p~~~~fp~~~~  411 (411)
T 3e6u_A          396 ADLLVPTKARFPAFEL  411 (411)
T ss_dssp             HHHTSGGGCCCTTTCC
T ss_pred             HHHcCCCcccCCCCCC
Confidence            9999999999999997
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1 Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A* Back     alignment and structure
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A* Back     alignment and structure
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 407
d2g0da1409 a.102.6.1 (A:7-415) Nisin biosynthesis protein Nis 1e-52
d2d5ja1 377 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrola 5e-04
d2d5ja1377 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrola 8e-04
>d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC {Lactococcus lactis [TaxId: 1358]} Length = 409 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: LanC-like
family: LanC-like
domain: Nisin biosynthesis protein NisC
species: Lactococcus lactis [TaxId: 1358]

 Score =  178 bits (453), Expect = 1e-52
 Identities = 57/375 (15%), Positives = 100/375 (26%), Gaps = 51/375 (13%)

Query: 68  QDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSASRDSGRVTFICGRAGVCA 127
            + TL TG  G   +L +      +    K   + +E   S     G +      +G   
Sbjct: 29  GELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYG-LLTGSLYSGAAG 87

Query: 128 LGAVLAKHAGDERLLDHYLTKFKE--------------IKLPSDLPNELLYGRVGFLWAC 173
           +   +     D+    + L                   ++  +    +++ G  G L   
Sbjct: 88  IALSILHLREDDEKYKNLLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYL 147

Query: 174 SFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRC--------PLMYEWHGKKYWGAA 225
             +N     D          +  + K    L +                   G    G A
Sbjct: 148 LLINDEQYDDLKILII--NFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLA 205

Query: 226 HGLAGIMHVLMDMELKPDEV----EDVKGTLRYMIKNRF--------------PSGNYPS 267
           HGLAG+  +L    +K          ++  +    K                        
Sbjct: 206 HGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEK 265

Query: 268 SEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGL-LKRVGICH 326
                S     WC+G PG++L             F+  A    E   +R L +    ICH
Sbjct: 266 VIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDSYMICH 325

Query: 327 GISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGG 386
           G SG   +     RL    ++    + F        ++       +G +      EGI G
Sbjct: 326 GYSGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEE-------YGDESGTGFLEGISG 378

Query: 387 MTHLFLDMIEPSEAR 401
              +           
Sbjct: 379 CILVLSKFEYSINFT 393
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Length = 377 Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Length = 377 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query407
d2g0da1409 Nisin biosynthesis protein NisC {Lactococcus lacti 100.0
d2g0da1409 Nisin biosynthesis protein NisC {Lactococcus lacti 99.81
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.72
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 97.3
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 97.1
d1nc5a_ 363 Hypothetical protein YteR {Bacillus subtilis [TaxI 94.07
d2sqca1352 Squalene-hopene cyclase {Alicyclobacillus acidocal 92.39
d1r76a_408 Polygalacturonic acid lyase (pectate lyase) {Azosp 89.69
d1r76a_408 Polygalacturonic acid lyase (pectate lyase) {Azosp 87.23
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 86.52
d2sqca1352 Squalene-hopene cyclase {Alicyclobacillus acidocal 85.13
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 84.2
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 81.4
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 81.16
d1gxma_324 Polygalacturonic acid lyase (pectate lyase) {Cellv 80.03
>d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: LanC-like
family: LanC-like
domain: Nisin biosynthesis protein NisC
species: Lactococcus lactis [TaxId: 1358]

Probab=100.00  E-value=1.1e-44  Score=357.77  Aligned_cols=322  Identities=18%  Similarity=0.146  Sum_probs=231.9

Q ss_pred             CCCCCcccCcHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHhcC--CCCCCceeeCCchHHHHHHHHHHHHcCCh-hHHH
Q 015433           67 VQDYTLYTGALGTAYLLFKAYQVTKNDNELKLCCDIVEACDSAS--RDSGRVTFICGRAGVCALGAVLAKHAGDE-RLLD  143 (407)
Q Consensus        67 ~~~~~ly~G~~Gial~l~~l~~~~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~G~~Gi~~~~~~l~~~~~~~-~~~~  143 (407)
                      ..+.+||+|.+||++||.++++.+++++|.+.|.+.++.+.+..  ....+.|+|+|.+|+++++..+++..++. ..++
T Consensus        28 ~~~~sLy~G~~GiaL~l~~l~~~t~~~~~~~~a~~~l~~~~~~~~~~~~~~~glf~G~~Gi~~~l~~~~~~~~~~~~~~~  107 (409)
T d2g0da1          28 FGELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGSLYSGAAGIALSILHLREDDEKYKNLLD  107 (409)
T ss_dssp             GGGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTSHHHHHHHHGGGTTTCHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCCCcceeCCHHHHHHHHHHHHhcchhhhHHHH
Confidence            34669999999999999999999999999999998888775432  23346899999999988776654432211 1112


Q ss_pred             HHHHHh----hhc-c-C----CCCCCcccccchhhHHHHHHHHhhHhCCCCCcHHHHHHHHHHHHHHhHHhhhcCCCCCc
Q 015433          144 HYLTKF----KEI-K-L----PSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLM  213 (407)
Q Consensus       144 ~~~~~~----~~~-~-~----~~~~~~d~~~G~AG~l~~ll~l~~~~~~~~~~~~~i~~i~~~ii~~~~~~~~~~~~pl~  213 (407)
                      ...+.+    ++. . .    .+...+|+++|.||++++++.+++...     ++.+..+.+.+.+..........+...
T Consensus       108 ~l~~~l~~~~~~~i~~~~~~~~~~~~~D~l~G~aG~~~~LL~~~~~~~-----~~~~~~i~~~l~~~~~~~~~~~~~~~~  182 (409)
T d2g0da1         108 SLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLINDEQY-----DDLKILIINFLSNLTKENNGLISLYIK  182 (409)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCCHHHHSSSSSHHHHHHHHTTCCCGGG-----HHHHHHHHHHHHHTTSCCSSSCTTCBC
T ss_pred             HHHHHHHHHHHHHHHHhhccccCCcccchhcccHHHHHHHHHhccccc-----cHHHHHHHHHHHHHHHhcccccccccc
Confidence            211111    111 1 1    112347999999999999987766543     234444555444432111100011100


Q ss_pred             -----------ccccCCccCCcccchHHHHHHHHcccC----CCchHHHHHHHHHHHHHccc---CCCCCCCCCC-----
Q 015433          214 -----------YEWHGKKYWGAAHGLAGIMHVLMDMEL----KPDEVEDVKGTLRYMIKNRF---PSGNYPSSEG-----  270 (407)
Q Consensus       214 -----------~~~~~~~~~G~aHG~aGI~~~L~~~~~----~~~~~~~i~~~l~~~~~~~~---~~gnwp~~~~-----  270 (407)
                                 ..+++..++|||||.+||+++|++++.    .+...+.++++++++.+.++   ...+||+.+.     
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~G~aHG~sGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~  262 (409)
T d2g0da1         183 SENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELK  262 (409)
T ss_dssp             GGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHH
T ss_pred             cccccccchhcccCCCCCccchhhhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHhhhccccCCCCCcCcccccc
Confidence                       012355689999999999999988753    22346677888888766554   2446886431     


Q ss_pred             ------CCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhCCC-CCCcccccchhHHHHHHHHHHHhC
Q 015433          271 ------SESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLL-KRVGICHGISGNTYVFLSLYRLTG  343 (407)
Q Consensus       271 ------~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~lCHG~aG~~~~ll~l~~~t~  343 (407)
                            ...+.+++||||+|||+++++.++++++|+++.+.+.++.+.+|++++. .++|||||.+|++++|+.+++.++
T Consensus       263 ~~~~~~~~~~~~~~WChG~~Gi~la~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~LCHG~aG~~~~l~~~~~~~~  342 (409)
T d2g0da1         263 KEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDSYMICHGYSGLIEICSLFKRLLN  342 (409)
T ss_dssp             HTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTTCCSCCTTTSHHHHHHHHHHHHHHHC
T ss_pred             cccccccCcccccccCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccCCCCCcccCcHHHHHHHHHHHHHHhC
Confidence                  1234578999999999999999999999999999999999999999986 469999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcCccccchHHHHHHHHHccCCCCC
Q 015433          344 NVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEA  400 (407)
Q Consensus       344 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~sL~~G~aGi~~~Ll~l~~p~~~  400 (407)
                      ++++.+++.++.........       ..++..++|||+|.|||+++|+++.+|.+.
T Consensus       343 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~gl~~G~aGi~~~Ll~~~~~~~~  392 (409)
T d2g0da1         343 TKKFDSYMEEFNVNSEQILE-------EYGDESGTGFLEGISGCILVLSKFEYSINF  392 (409)
T ss_dssp             CCTTHHHHHHHHHTHHHHHH-------SCCSTTCSSTTTSHHHHHHHHHHHHSCCCS
T ss_pred             CHHHHHHHHHHHHHHHHhcc-------cCCCCCCCchhccHHHHHHHHHHhcCCCCC
Confidence            99999888877665554432       134668999999999999999999999764
>d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2sqca1 a.102.4.2 (A:8-36,A:308-630) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]} Back     information, alignment and structure
>d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]} Back     information, alignment and structure
>d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2sqca1 a.102.4.2 (A:8-36,A:308-630) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1gxma_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Cellvibrio cellulosa [TaxId: 155077]} Back     information, alignment and structure