Citrus Sinensis ID: 015471

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400------

MTWKSRGGIESASHKSFMSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEKLKLVSEGCDSVMNVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQESIINGSPLSDNLKINELKGKRKYLMVVGINSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF

cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHcccccccccccccccHHHcccccccHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHccccccccccccccccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHcccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHHcccEEEcccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHccccHHHHHHccccc

cccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcccccccccccEEEEEEEEcccccHHHHHHHHHHHccccHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEccccccccccccEEEcccHcccccccccccccccccEEEEcHHHHHHHHHccHHHHHHcHccccHHHHHHcccEEEEccccHcccccccccEEcccccEEEEEEcccccccccHHHHHHHHHHHcccccccEEEEEc

mtwksrggiesashksfmsKKWTLLLCIGCFcagmlfsdrmwtvpevrdvsrgagfedekLKLVSEGCDSVMNVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQesiingsplsdnlkinelkgKRKYLMVVGINsafssrkrrdsvratwmpqgdkrkkleeEKGIVMRFVIghsatsggilDRAIeaedkkhgdfLRLEHVEGYLELSAKTKIFFATAVALWdadfyvkvddDVHVNIATLGATlarhrskprvyigcmksgpvlaqkgvryhepeywkfgeegnkyfRHATGQLYAISKDLASYISINQHVLHKfanedvslgswfigldaehiddrrlccgtppdcewkaqagnvcvasfdwscsgicrSAERMKEVHRRCGEGENALWSAAF

mtwksrggiesashksfmskKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSrgagfedeklklvseGCDSVMNVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATqesiingsplsdnlKINELKGKRKYLMVVGinsafssrkrrdsvratwmpqgdkrkkleeekGIVMRfvighsatsggILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATlgatlarhrskprvyigcmksgpvlaqkgvRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERMKEVHRrcgegenalwsaaf

*****************MSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEKLKLVSEGCDSVMNVKR**AEILGEVSKTHHAIQALDKTISNLEMELA*****************NLKINELKGKRKYLMVVGINSAF***************************GIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAER********************

*********************WTLLLCIGCFCAGMLFSDRMWTV**********************************************AIQALDKTISNLEMEL*******************************LMVVGINSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF

***************SFMSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEKLKLVSEGCDSVMNVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQESIINGSPLSDNLKINELKGKRKYLMVVGINSAF************WMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF

****************FMSKKWTLLLCIGCFCAGMLFSDRMWTVP******************VSEGCDSVMNVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQE*******************KRKYLMVVGINSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF

iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MTWKSRGGIESASHKSFMSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEKLKLVSEGCDSVMNVKREPAEILGEVSKTHHAxxxxxxxxxxxxxxxxxxxxxQESIINGSPLSDNLKINELKGKRKYLMVVGINSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		406	2.2.26 [Sep-21-2011]
A8MRC7		407	Probable beta-1,3-galacto	yes	no	0.970	0.968	0.766	0.0
Q9ZV71		409	Probable beta-1,3-galacto	no	no	0.995	0.987	0.746	0.0
Q8LEJ9		407	Probable beta-1,3-galacto	no	no	0.980	0.977	0.785	0.0
Q9MAP8		399	Probable beta-1,3-galacto	no	no	0.960	0.977	0.620	1e-148
Q9SAA4		384	Probable beta-1,3-galacto	no	no	0.938	0.992	0.632	1e-144
Q6NQB7		393	Beta-1,3-galactosyltransf	no	no	0.921	0.951	0.625	1e-143
Q9C809		395	Probable beta-1,3-galacto	no	no	0.940	0.967	0.587	1e-133
Q9LM60		398	Probable beta-1,3-galacto	no	no	0.926	0.944	0.578	1e-131
Q94F27		338	Probable beta-1,3-galacto	no	no	0.613	0.736	0.474	5e-66
Q94A05		345	Probable beta-1,3-galacto	no	no	0.672	0.791	0.435	6e-60

>sp\|A8MRC7\|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1	Back alignment and function desciption

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/398 (76%), Positives = 355/398 (89%), Gaps = 4/398 (1%)

Query: 13  SHKSFMSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEKLKLVSEGCDSVM 72
           S +SF+S+KWT+LLC+G FC GM F++RMW +PE + +S  +  E E+LKLVSEGC+   
Sbjct: 10  SSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCNPKA 69

Query: 73  ----NVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQESIINGSPLSDNLKI 128
                VKR+P  + GEV+ TH A+Q LDKTIS+LEMELAAAR+ QES+ NG+PLSD++  
Sbjct: 70  LYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDDMGK 129

Query: 129 NELKGKRKYLMVVGINSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATS 188
            + + +R++LMVVGIN+AFSSRKRRDS+RATWMPQG+KRK+LEEEKGI++RFVIGHSAT+
Sbjct: 130 KQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSATT 189

Query: 189 GGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVN 248
           GGILDRAIEAED+KHGDFLRL+HVEGYLELS KTK +F+TA ++WDADFYVKVDDDVHVN
Sbjct: 190 GGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVN 249

Query: 249 IATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYA 308
           IATLG TL RHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GNKYFRHATGQLYA
Sbjct: 250 IATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYA 309

Query: 309 ISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNV 368
           IS+DLASYISINQHVLHK+ANEDVSLG+WFIG+D +HIDDRRLCCGTPPDCEWKAQAGN+
Sbjct: 310 ISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQAGNI 369

Query: 369 CVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF 406
           CVASFDWSCSGICRSA+R+KEVHRRCGEGE ALWSA F
Sbjct: 370 CVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q9ZV71\|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1	Back alignment and function description

>sp\|Q8LEJ9\|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1	Back alignment and function description

>sp\|Q9MAP8\|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1	Back alignment and function description

>sp\|Q9SAA4\|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2	Back alignment and function description

>sp\|Q6NQB7\|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1	Back alignment and function description

>sp\|Q9C809\|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1	Back alignment and function description

>sp\|Q9LM60\|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1	Back alignment and function description

>sp\|Q94F27\|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1	Back alignment and function description

>sp\|Q94A05\|B3GTA_ARATH Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		406
359494044		405	PREDICTED: probable beta-1,3-galactosylt	0.995	0.997	0.845	0.0
359494046		411	PREDICTED: probable beta-1,3-galactosylt	0.995	0.982	0.832	0.0
449463262		407	PREDICTED: probable beta-1,3-galactosylt	0.997	0.995	0.823	0.0
224128958		405	predicted protein [Populus trichocarpa]	0.995	0.997	0.803	0.0
225447013		407	PREDICTED: probable beta-1,3-galactosylt	0.992	0.990	0.819	0.0
147776969		373	hypothetical protein VITISV_007689 [Viti	0.916	0.997	0.855	0.0
224069002		405	predicted protein [Populus trichocarpa]	0.995	0.997	0.820	0.0
356517642		407	PREDICTED: probable beta-1,3-galactosylt	0.987	0.985	0.791	0.0
449453504		407	PREDICTED: probable beta-1,3-galactosylt	0.992	0.990	0.804	0.0
297848780		407	galactosyltransferase family protein [Ar	0.970	0.968	0.768	0.0

>gi\|359494044\|ref\|XP_002279814.2\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 1 [Vitis vinifera] gi\|297737446\|emb\|CBI26647.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/407 (84%), Positives = 381/407 (93%), Gaps = 3/407 (0%)

Query: 1   MTWKSRGGIESASHKSFMSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEK 60
           M+WKSRG IE +S KS +S+KWTLL CIGCFCAGMLFSDRMWT+PE + +SR    EDE+
Sbjct: 1   MSWKSRG-IEPSS-KSVVSRKWTLLFCIGCFCAGMLFSDRMWTMPEAKGISRTTRTEDEE 58

Query: 61  LKLVSEGC-DSVMNVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQESIING 119
           LKLVSEGC  +  +VK +  +ILGEVS+TH+AIQ LDKTISNLEMELAAARA QESI+NG
Sbjct: 59  LKLVSEGCAPTTKDVKHKSKDILGEVSRTHYAIQTLDKTISNLEMELAAARAAQESILNG 118

Query: 120 SPLSDNLKINELKGKRKYLMVVGINSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMR 179
           SP++++L I +  G+RKYLMV+GIN+AFSSRKRRDSVRATWMPQGDKRKKLEEEKGI++R
Sbjct: 119 SPITEDLPITKSSGRRKYLMVIGINTAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIIVR 178

Query: 180 FVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYV 239
           FVIGHSATSGGILDRAIEAED++HGDFLRLEHVEGYLELSAKTK +FATAVA+WDADFYV
Sbjct: 179 FVIGHSATSGGILDRAIEAEDRRHGDFLRLEHVEGYLELSAKTKAYFATAVAMWDADFYV 238

Query: 240 KVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYF 299
           KVDDDVHVNIATLGATLARHRSKPR+YIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYF
Sbjct: 239 KVDDDVHVNIATLGATLARHRSKPRIYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYF 298

Query: 300 RHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDC 359
           RHATGQLYAISKDLA+YISINQHVLHK+ANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDC
Sbjct: 299 RHATGQLYAISKDLATYISINQHVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDC 358

Query: 360 EWKAQAGNVCVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF 406
           EWKAQAGN+CVASFDWSCSGICRS+ER++EVHRRCGEGENA+WSA F
Sbjct: 359 EWKAQAGNICVASFDWSCSGICRSSERIREVHRRCGEGENAVWSAVF 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359494046\|ref\|XP_002279828.2\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449463262\|ref\|XP_004149353.1\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224128958\|ref\|XP_002320464.1\| predicted protein [Populus trichocarpa] gi\|222861237\|gb\|EEE98779.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225447013\|ref\|XP_002268282.1\| PREDICTED: probable beta-1,3-galactosyltransferase 2 [Vitis vinifera] gi\|297739150\|emb\|CBI28801.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147776969\|emb\|CAN63417.1\| hypothetical protein VITISV_007689 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224069002\|ref\|XP_002302876.1\| predicted protein [Populus trichocarpa] gi\|222844602\|gb\|EEE82149.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356517642\|ref\|XP_003527496.1\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max]	Back alignment and taxonomy information

>gi\|449453504\|ref\|XP_004144497.1\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297848780\|ref\|XP_002892271.1\| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi\|297338113\|gb\|EFH68530.1\| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		406
TAIR\|locus:2207225		407	AT1G05170 [Arabidopsis thalian	0.970	0.968	0.766	9.9e-174
TAIR\|locus:2062545		409	AT2G32430 [Arabidopsis thalian	0.995	0.987	0.746	4.3e-173
TAIR\|locus:2116452		407	AT4G26940 [Arabidopsis thalian	0.980	0.977	0.785	1e-171
TAIR\|locus:2027352		384	AT1G11730 [Arabidopsis thalian	0.763	0.807	0.724	8e-142
TAIR\|locus:2038031		399	AT1G32930 [Arabidopsis thalian	0.960	0.977	0.620	2e-136
TAIR\|locus:2029471		393	AT1G77810 [Arabidopsis thalian	0.918	0.949	0.627	9.1e-132
TAIR\|locus:505006138		398	DD46 [Arabidopsis thaliana (ta	0.933	0.952	0.575	8.9e-125
TAIR\|locus:2154247		338	AT5G53340 [Arabidopsis thalian	0.635	0.763	0.458	2.6e-63
TAIR\|locus:2059531		346	AT2G25300 [Arabidopsis thalian	0.615	0.722	0.469	2.8e-57
TAIR\|locus:2116627		345	AT4G32120 [Arabidopsis thalian	0.672	0.791	0.438	5.9e-57

TAIR\|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1688 (599.3 bits), Expect = 9.9e-174, P = 9.9e-174
 Identities = 305/398 (76%), Positives = 355/398 (89%)

Query:    13 SHKSFMSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEKLKLVSEGCDSVM 72
             S +SF+S+KWT+LLC+G FC GM F++RMW +PE + +S  +  E E+LKLVSEGC+   
Sbjct:    10 SSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCNPKA 69

Query:    73 ----NVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQESIINGSPLSDNLKI 128
                  VKR+P  + GEV+ TH A+Q LDKTIS+LEMELAAAR+ QES+ NG+PLSD++  
Sbjct:    70 LYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDDMGK 129

Query:   129 NELKGKRKYLMVVGINSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATS 188
              + + +R++LMVVGIN+AFSSRKRRDS+RATWMPQG+KRK+LEEEKGI++RFVIGHSAT+
Sbjct:   130 KQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSATT 189

Query:   189 GGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVN 248
             GGILDRAIEAED+KHGDFLRL+HVEGYLELS KTK +F+TA ++WDADFYVKVDDDVHVN
Sbjct:   190 GGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVN 249

Query:   249 IATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYA 308
             IATLG TL RHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GNKYFRHATGQLYA
Sbjct:   250 IATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYA 309

Query:   309 ISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNV 368
             IS+DLASYISINQHVLHK+ANEDVSLG+WFIG+D +HIDDRRLCCGTPPDCEWKAQAGN+
Sbjct:   310 ISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQAGNI 369

Query:   369 CVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF 406
             CVASFDWSCSGICRSA+R+KEVHRRCGEGE ALWSA F
Sbjct:   370 CVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR\|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LEJ9	B3GT4_ARATH	2, ., 4, ., 1, ., -	0.785	0.9802	0.9778	no	no
Q9ZV71	B3GT3_ARATH	2, ., 4, ., 1, ., -	0.7469	0.9950	0.9877	no	no
A8MRC7	B3GT2_ARATH	2, ., 4, ., 1, ., -	0.7663	0.9704	0.9680	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!
4th Layer	2.4.1.79	LOW CONFIDENCE prediction!
3rd Layer	2.4.1.134	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		406
PLN03193		408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	0.0
pfam01762		196	pfam01762, Galactosyl_T, Galactosyltransferase	5e-63
pfam13334		89	pfam13334, DUF4094, Domain of unknown function (DU	3e-40
PLN03133		636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	1e-06

>gnl\|CDD\|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional	Back alignment and domain information

 Score =  783 bits (2023), Expect = 0.0
 Identities = 340/410 (82%), Positives = 373/410 (90%), Gaps = 6/410 (1%)

Query: 1   MTWKSRGGIESASHKSFMSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEK 60
           M+ KSRG  E  S +S +S+KWTLLLC+GCFCAGMLF+DRMWT+PE + +SR    E E+
Sbjct: 1   MSTKSRG--EEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAER 58

Query: 61  LKLVSEGCD----SVMNVKREPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQESI 116
           LKLVSEGCD        VKR+  +I+GEVSKTH+AIQ LDKTISNLEMELAAARA QESI
Sbjct: 59  LKLVSEGCDPKTLYQKEVKRDSKDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESI 118

Query: 117 INGSPLSDNLKINELKGKRKYLMVVGINSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGI 176
           +NGSP+S++LK  +  GKR+YLMVVGIN+AFSSRKRRDSVRATWMPQG+KRKKLEEEKGI
Sbjct: 119 LNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGI 178

Query: 177 VMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDAD 236
           ++RFVIGHSATSGGILDRAIEAED+KHGDFLRL+HVEGYLELSAKTK +FATAVA+WDAD
Sbjct: 179 IIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDAD 238

Query: 237 FYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGN 296
           FYVKVDDDVHVNIATLG TL RHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GN
Sbjct: 239 FYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGN 298

Query: 297 KYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTP 356
           KYFRHATGQLYAISKDLASYISINQHVLHK+ANEDVSLGSWFIGLD EHIDDRRLCCGTP
Sbjct: 299 KYFRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTP 358

Query: 357 PDCEWKAQAGNVCVASFDWSCSGICRSAERMKEVHRRCGEGENALWSAAF 406
           PDCEWKAQAGN+CVASFDWSCSGICRSA+R+KEVHRRCGEGENALWSA F
Sbjct: 359 PDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSATF 408

Length = 408

>gnl\|CDD\|216686 pfam01762, Galactosyl_T, Galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094)	Back alignment and domain information

>gnl\|CDD\|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		406
PLN03193		408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2288		274	consensus Galactosyltransferases [Carbohydrate tra	100.0
PLN03133		636	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2287		349	consensus Galactosyltransferases [Carbohydrate tra	100.0
PF01762		195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
PTZ00210		382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	99.98
PF13334		95	DUF4094: Domain of unknown function (DUF4094)	99.95
PF02434		252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.79
KOG2246		364	consensus Galactosyltransferases [Carbohydrate tra	99.7
PLN03153		537	hypothetical protein; Provisional	99.15
KOG3708		681	consensus Uncharacterized conserved protein [Funct	97.36
PF01755		200	Glyco_transf_25: Glycosyltransferase family 25 (LP	95.93
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	94.53
cd04192		229	GT_2_like_e Subfamily of Glycosyltransferase Famil	94.41
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	94.24
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	93.18
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	93.13
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	92.83
PF00535		169	Glycos_transf_2: Glycosyl transferase family 2; In	92.34
PRK11204		420	N-glycosyltransferase; Provisional	91.73
PF13506		175	Glyco_transf_21: Glycosyl transferase family 21	91.65
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	91.43
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	90.9
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	90.65
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	89.54
cd06532		128	Glyco_transf_25 Glycosyltransferase family 25 [lip	89.18
cd06423		180	CESA_like CESA_like is the cellulose synthase supe	87.36
cd04187		181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	86.96
PF13632		193	Glyco_trans_2_3: Glycosyl transferase family group	84.89
PRK14583		444	hmsR N-glycosyltransferase; Provisional	84.58
cd04196		214	GT_2_like_d Subfamily of Glycosyltransferase Famil	82.74
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	81.92
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	81.56
cd04179		185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	80.04

>PLN03193 beta-1,3-galactosyltransferase; Provisional	Back alignment and domain information

Probab=100.00  E-value=1.7e-109  Score=833.41  Aligned_cols=404  Identities=84%  Similarity=1.383  Sum_probs=376.5

Q ss_pred             CCccccCcccccCCCCCchhHHHHHHHHHHHHhHhhhccccCCCccccccccccccccccccccccCCcccc---c-ccC
Q 015471            1 MTWKSRGGIESASHKSFMSKKWTLLLCIGCFCAGMLFSDRMWTVPEVRDVSRGAGFEDEKLKLVSEGCDSVM---N-VKR   76 (406)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~   76 (406)
                      ||.|+||  +...+++.||++|+++||++|||+|++|++|||..||..+..+.++++++++++.+++|++|+   | +++
T Consensus         1 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~   78 (408)
T PLN03193          1 MSTKSRG--EEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLKLVSEGCDPKTLYQKEVKR   78 (408)
T ss_pred             CCccccc--ccccccccccHHHHHHHHHHHHHHHHhhccccccCCccccccccccchhhhhhhhcccccccccccccccc
Confidence            8999999  578899999999999999999999999999999999999988888888999999999999876   3 356


Q ss_pred             CcchhhhchHhhHHHHHHhhhhHHHHHHHHHHHhhhcccccCCCCCCcccccccccCCCCeeEEEEEeCCCCCHHHHHHH
Q 015471           77 EPAEILGEVSKTHHAIQALDKTISNLEMELAAARATQESIINGSPLSDNLKINELKGKRKYLMVVGINSAFSSRKRRDSV  156 (406)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llI~V~S~p~~~~rR~aI  156 (406)
                      ++++||++|++||+|||+|+|+|+.||||||+|++.+..+.++.|.++.....+...++++++||+|+|+|+|++||++|
T Consensus        79 ~~~~~~~~~~~t~~~~~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AI  158 (408)
T PLN03193         79 DSKDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSV  158 (408)
T ss_pred             chhHHHHHHhhHHHHHHHHhhhhhHHhHHHHHHHhhhhhhccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHH
Confidence            89999999999999999999999999999999999777677776665433333445577899999999999999999999


Q ss_pred             HHHhccCCcccccccccCCeEEEEEeecCCCCCCchHHHHHHHHhhcCCEEEeeccccCCchhHHHHHHHHHHHhcCCcc
Q 015471          157 RATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDAD  236 (406)
Q Consensus       157 R~TW~~~~~~l~~l~~~~~i~v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~  236 (406)
                      |+|||++++.+.+++.+.+++++||+|++.++++.++++|++|+++|||||++||+|+|.|||+||+++|+|+.++++|+
T Consensus       159 R~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAk  238 (408)
T PLN03193        159 RATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDAD  238 (408)
T ss_pred             HHHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCe
Confidence            99999998777777778999999999999866678999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCceeeeHHHHHHHHHhcCCCCceEEEEeccCcccccCCCccccCcccccCCCCCccCCCcCCCceeecHHHHHH
Q 015471          237 FYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASY  316 (406)
Q Consensus       237 fvlKvDDDvfVnv~~L~~~L~~~~~~~~ly~G~~~~~pv~r~~~~Kwyvp~~~~fg~~~~~YP~Y~~G~gYvlS~dla~~  316 (406)
                      ||||+|||+|||+++|+.+|..++.++++|+|||+.+|++.+++.|||+|++|+||++++.|||||+|+|||||+|+|++
T Consensus       239 F~mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~  318 (408)
T PLN03193        239 FYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASY  318 (408)
T ss_pred             EEEEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHH
Confidence            99999999999999999999988777889999999898877788899999999999889999999999999999999999


Q ss_pred             HHHhccccCCCCcchHHHHHHHhcCCCeeeCCCCcccCCCCCcccccccCCcccccccccccccccchhHHHHhhccCch
Q 015471          317 ISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERMKEVHRRCGE  396 (406)
Q Consensus       317 I~~~s~~l~~~~~EDV~lG~~l~gl~v~~~d~~~f~~~~~p~~e~k~~~~~~C~~~f~~~~sgic~~~~~l~~vH~~~p~  396 (406)
                      |+.++..++.|++|||++|+||++|+|+|+|+++|||+++|+|+||++++++|.++|||+|||+|++++||.++|++|+|
T Consensus       319 I~~n~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~~~~~~csg~c~~~~~~~~~h~~c~~  398 (408)
T PLN03193        319 ISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGE  398 (408)
T ss_pred             HHhChhhhcccCcchhhhhhHhccCCceeeecccccCCCCccccccccCCCeeEEEecccCcccCCHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHhhhhcC
Q 015471          397 GENALWSAAF  406 (406)
Q Consensus       397 ~~~~~W~~~~  406 (406)
                      +..++|++.|
T Consensus       399 ~~~~~~~~~~  408 (408)
T PLN03193        399 GENALWSATF  408 (408)
T ss_pred             CcccceeecC
Confidence            9999999876

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN03133 beta-1,3-galactosyltransferase; Provisional	Back alignment and domain information

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional	Back alignment and domain information

>PF13334 DUF4094: Domain of unknown function (DUF4094)	Back alignment and domain information

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []	Back alignment and domain information

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN03153 hypothetical protein; Provisional	Back alignment and domain information

>KOG3708 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>PF13506 Glyco_transf_21: Glycosyl transferase family 21	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis	Back alignment and domain information

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1	Back alignment and domain information

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2	Back alignment and domain information

>PRK14583 hmsR N-glycosyltransferase; Provisional	Back alignment and domain information

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		406
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2j0a_A		280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 49.1 bits (116), Expect = 2e-06
 Identities = 39/265 (14%), Positives = 74/265 (27%), Gaps = 74/265 (27%)

Query: 145 SAFSSRKRRDSVRATWMPQGDKRKK------LEEEKGIVMRFVIGHSATSGGILDRAIEA 198
           S  S  +    +                   L +++ +V +FV      +   L   I+ 
Sbjct: 44  SILSKEEIDHIIM---SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100

Query: 199 EDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALW-DADFYVKVDDDVHVN----IATLG 253
           E +               + S  T+++      L+ D   + K     +V+       L 
Sbjct: 101 EQR---------------QPSMMTRMYIEQRDRLYNDNQVFAK----YNVSRLQPYLKLR 141

Query: 254 ATLARHRSKPRVYI----GCMKSGPVLAQKGVRYHEPE-------YW-KFGEEGNKYFRH 301
             L   R    V I    G  K+   +A      ++ +       +W            +
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKT--WVALDVCLSYKVQCKMDFKIFWLNLKN------CN 193

Query: 302 ATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFIGLDAEHIDD--RRLCCGTP-PD 358
           +   +  + + L   I  N       ++         I L    I    RRL    P  +
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSN--------IKLRIHSIQAELRRLLKSKPYEN 245

Query: 359 C------EWKAQAGNVCVASFDWSC 377
           C         A+       +F+ SC
Sbjct: 246 CLLVLLNVQNAK----AWNAFNLSC 266

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		406
2j0a_A		280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.92
1xhb_A		472	Polypeptide N-acetylgalactosaminyltransferase 1; g	92.93
2d7i_A		570	Polypeptide N-acetylgalactosaminyltransferase 10;	90.16
2ffu_A		501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	89.06
3bcv_A		240	Putative glycosyltransferase protein; protein stru	88.37
1qg8_A		255	Protein (spore coat polysaccharide biosynthesis P	88.11
4fix_A		657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	86.31
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	83.57

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*	Back alignment and structure

Probab=99.92  E-value=6e-25  Score=213.92  Aligned_cols=193  Identities=16%  Similarity=0.166  Sum_probs=131.6

Q ss_pred             CCeeEEEEEeCCCC-CHHHHHHHHHHhccCCcccccccccCCeEEEEEeecCCCCCCchHHHHHHHHhhcCCEEEeecc-
Q 015471          135 RKYLMVVGINSAFS-SRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHV-  212 (406)
Q Consensus       135 ~~~~llI~V~S~p~-~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~-  212 (406)
                      ..-.|+|+|+|+++ +.+|+.+||+||++.+..           .+|+.+...  +    ..+...  ..+++++.++. 
T Consensus        11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-----------~~fifsd~~--d----~~l~~~--~~~~~~~~~~~~   71 (280)
T 2j0a_A           11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-----------QTFIFTDSP--D----ERLQER--LGPHLVVTQCSA   71 (280)
T ss_dssp             CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-----------GEEEEESSC--C----HHHHHH--HGGGEEECCC--
T ss_pred             CcccEEEEEECcHHHHHHHHHHHHHHHhccCCC-----------ceEEEcCCC--c----cccccc--ccccceeccccc
Confidence            34678899999998 557889999999987531           124333322  1    123222  35678887764 


Q ss_pred             -ccCCchhHHHHHHHHHHHhcCCccEEEEecCceeeeHHHHHHHHHhcCCCCceEEEEeccCcccccCCCccccCccccc
Q 015471          213 -EGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKF  291 (406)
Q Consensus       213 -DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~L~~~~~~~~ly~G~~~~~pv~r~~~~Kwyvp~~~~f  291 (406)
                       +++.+|+.|+...+.+.. +++++||+|+|||||||+++|+++|..+++.+++|+|......+++   .++++|...+ 
T Consensus        72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~~-  146 (280)
T 2j0a_A           72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQRT-  146 (280)
T ss_dssp             -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred             cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCccccc-
Confidence             467889999999998764 3699999999999999999999999999999999999975432322   2445554322 


Q ss_pred             CCCCCccCCCc-CCCceeecHHHHHHHHHhcccc-------CCCCcchHHHHHHHh-cCCCeeeCCCCcccC
Q 015471          292 GEEGNKYFRHA-TGQLYAISKDLASYISINQHVL-------HKFANEDVSLGSWFI-GLDAEHIDDRRLCCG  354 (406)
Q Consensus       292 g~~~~~YP~Y~-~G~gYvlS~dla~~I~~~s~~l-------~~~~~EDV~lG~~l~-gl~v~~~d~~~f~~~  354 (406)
                        +...| +|| +|+|||||++++++|+......       .....||+++|+|+. .+||...+...|+..
T Consensus       147 --~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~  215 (280)
T 2j0a_A          147 --KLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSH  215 (280)
T ss_dssp             ------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCS
T ss_pred             --ccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCC
Confidence              22345 466 6789999999999999754322       223469999999998 999999999888753

PyMOL of 2j0a

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17	Back alignment and structure

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*	Back alignment and structure

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*	Back alignment and structure

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}	Back alignment and structure

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*	Back alignment and structure

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		406
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	88.56

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.56  E-value=5  Score=35.45  Aligned_cols=164  Identities=16%  Similarity=0.124  Sum_probs=82.4

Q ss_pred             EEEEEeecCCCCCCchHHHHHHHHhhcCC-EEEeeccccCCchhHHHHHHHHHHHhcCCccEEEEecCceeeeHHHHHHH
Q 015471          177 VMRFVIGHSATSGGILDRAIEAEDKKHGD-FLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGAT  255 (406)
Q Consensus       177 ~v~FvlG~s~~~~~~~~~~L~~E~~~~~D-IL~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~  255 (406)
                      .++.|=..|.  ++.....+++-.+.+.+ |..+...+   |..  .-.+...+.+.-..+|++.+|+|+.+.++-|..+
T Consensus        56 EIIvVDdgS~--d~~~~~~l~~~~~~~~~~i~vi~~~~---n~G--~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l  128 (328)
T d1xhba2          56 EIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQ---RSG--LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPL  128 (328)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSS---CCC--HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHH
T ss_pred             EEEEEECCCC--hhhHHHHHHHHHHhcCCCeEEEEecc---ccc--chHHHHHHHHhhhcceeeecCcccccChhHHHHH
Confidence            3555543333  23344445444455555 33333222   221  1224555555568899999999999998877776


Q ss_pred             HHhcCCCCc-eEEEEec--cC---------ccccc-----CCCccc-cCccc---ccCC-CCCccCCCcCCCceeecHHH
Q 015471          256 LARHRSKPR-VYIGCMK--SG---------PVLAQ-----KGVRYH-EPEYW---KFGE-EGNKYFRHATGQLYAISKDL  313 (406)
Q Consensus       256 L~~~~~~~~-ly~G~~~--~~---------pv~r~-----~~~Kwy-vp~~~---~fg~-~~~~YP~Y~~G~gYvlS~dl  313 (406)
                      +......+. +..|.+.  .+         +..+.     ....|+ .|...   ...+ .....-+++.|+++++++++
T Consensus       129 ~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  208 (328)
T d1xhba2         129 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY  208 (328)
T ss_dssp             HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred             HHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHH
Confidence            654432222 2223221  10         11000     001111 11100   0000 01123356789999999999


Q ss_pred             HHHHHHhccccCCCCcchHHHHHHHh--cCCCeeeC
Q 015471          314 ASYISINQHVLHKFANEDVSLGSWFI--GLDAEHID  347 (406)
Q Consensus       314 a~~I~~~s~~l~~~~~EDV~lG~~l~--gl~v~~~d  347 (406)
                      ...+---.+.+..+..||+-++.-+.  |..+..+.
T Consensus       209 f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p  244 (328)
T d1xhba2         209 FQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVT  244 (328)
T ss_dssp             HHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEE
T ss_pred             HHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeC
Confidence            99875444444445579988875554  44444433

PyMOL of d1xhba2