Citrus Sinensis ID: 015521

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----

MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLQKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF

ccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccHHHHHccccccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHcccccccccccccccccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEcccccEEcHHHHHHHHHcccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHHcccEEEcccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHcHHHHHHcccccc

ccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccccccccccEEEEEEEEcccccHHHHHHHHHHHcccHHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEccccccccccccEEEcccEEEcccccccccccccccEEEEcHHHHHHHHHccHHHHHHcHccccHHHHHHcccEEEEcccHHcccccccccEEcccccEEEEEEcccccccccHHHHHHHHHHHcccccccEEEEcc

mslkskgeltsrsvVSQKWTFLLCLGcfcagmlftnrmwavpeskgftrTTAMEAEKLKLVsegcnprlqkvvrhdskDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESilsgsplsedlkktessgkrRYLMVVGINTafssrkrrdSVRATWMLQGEKRKRLEEEKGIIMRFVIghsatsggilDRAIeaedrkhgdfmrlDHVEGYLELSAKTKIYFATAVSlwdadfyvkvdddVHVNIATLGQTlvrhrskprvyigcmksgpvlnqkgvryhepeywkfgeagnryfrHATGQLYAISKDLAAYISINQHVLHKyanedvslgswfigldvehiddrrlccgtppdcewkaqagnicvasfdwtcsgicrsaDRIKEVHRRCGEGENALWSATF

mslkskgeltsrsvvsqKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKlvsegcnprlqkVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQesilsgsplsedlkktessgkrrylmvvgintafssrkrrdsvratwmlqgekrkrleeekGIIMRfvighsatsggILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIAtlgqtlvrhrskprvyigcmksgpvlnqkgvRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHrrcgegenalwsatf

MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLQKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGekrkrleeekGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF

*************VVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLQKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLE********************************RYLMVVGINTAFS*******VRATWMLQ********EEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGE**********

******************WTFLLCLGCFCAGMLFTNRMWAVP****************************************EVFKTHNAIQTLDKTISNLE**********************************LMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF

*************VVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLQKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSP***********GKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF

*************VVSQKWTFLLCLGCFCAGMLFTNRMWAVP**********************C*********HDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQES******************KRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF

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iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLQKVVRHDSKDIFGEVFKTHNAxxxxxxxxxxxxxxxxxxxxxQESILSGSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		405	2.2.26 [Sep-21-2011]
A8MRC7		407	Probable beta-1,3-galacto	yes	no	1.0	0.995	0.818	0.0
Q9ZV71		409	Probable beta-1,3-galacto	no	no	1.0	0.990	0.799	0.0
Q8LEJ9		407	Probable beta-1,3-galacto	no	no	0.970	0.965	0.756	1e-176
Q9MAP8		399	Probable beta-1,3-galacto	no	no	0.958	0.972	0.631	1e-148
Q9SAA4		384	Probable beta-1,3-galacto	no	no	0.938	0.989	0.616	1e-146
Q6NQB7		393	Beta-1,3-galactosyltransf	no	no	0.930	0.959	0.599	1e-141
Q9C809		395	Probable beta-1,3-galacto	no	no	0.948	0.972	0.580	1e-134
Q9LM60		398	Probable beta-1,3-galacto	no	no	0.972	0.989	0.551	1e-129
Q94F27		338	Probable beta-1,3-galacto	no	no	0.639	0.766	0.478	5e-68
Q94A05		345	Probable beta-1,3-galacto	no	no	0.622	0.730	0.431	1e-56

>sp\|A8MRC7\|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1	Back alignment and function desciption

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/407 (81%), Positives = 369/407 (90%), Gaps = 2/407 (0%)

Query: 1   MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKL 60
           MS K KGE +SRS VS+KWT LLCLG FC GM FTNRMW +PESKG +  +  EAE+LKL
Sbjct: 1   MSAKIKGEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKL 60

Query: 61  VSEGCNPR--LQKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSG 118
           VSEGCNP+   QK V+ D + +FGEV  TH A+QTLDKTIS+LEMELAAAR+ QES+ +G
Sbjct: 61  VSEGCNPKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNG 120

Query: 119 SPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMR 178
           +PLS+D+ K +   +RR+LMVVGINTAFSSRKRRDS+RATWM QGEKRKRLEEEKGII+R
Sbjct: 121 APLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIR 180

Query: 179 FVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYV 238
           FVIGHSAT+GGILDRAIEAEDRKHGDF+RLDHVEGYLELS KTK YF+TA S+WDADFYV
Sbjct: 181 FVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYV 240

Query: 239 KVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYF 298
           KVDDDVHVNIATLG+TLVRHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GN+YF
Sbjct: 241 KVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYF 300

Query: 299 RHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDC 358
           RHATGQLYAIS+DLA+YISINQHVLHKYANEDVSLG+WFIG+DV+HIDDRRLCCGTPPDC
Sbjct: 301 RHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDC 360

Query: 359 EWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF 405
           EWKAQAGNICVASFDW+CSGICRSADRIKEVHRRCGEGE ALWSATF
Sbjct: 361 EWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q9ZV71\|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1	Back alignment and function description

>sp\|Q8LEJ9\|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1	Back alignment and function description

>sp\|Q9MAP8\|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1	Back alignment and function description

>sp\|Q9SAA4\|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2	Back alignment and function description

>sp\|Q6NQB7\|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1	Back alignment and function description

>sp\|Q9C809\|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1	Back alignment and function description

>sp\|Q9LM60\|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1	Back alignment and function description

>sp\|Q94F27\|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1	Back alignment and function description

>sp\|Q94A05\|B3GTA_ARATH Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		405
224128958		405	predicted protein [Populus trichocarpa]	0.997	0.997	0.874	0.0
225447013		407	PREDICTED: probable beta-1,3-galactosylt	1.0	0.995	0.884	0.0
449453504		407	PREDICTED: probable beta-1,3-galactosylt	1.0	0.995	0.879	0.0
449493139		407	PREDICTED: LOW QUALITY PROTEIN: probable	1.0	0.995	0.879	0.0
359494046		411	PREDICTED: probable beta-1,3-galactosylt	1.0	0.985	0.832	0.0
356542818		406	PREDICTED: probable beta-1,3-galactosylt	0.997	0.995	0.842	0.0
356517642		407	PREDICTED: probable beta-1,3-galactosylt	0.997	0.992	0.850	0.0
359494044		405	PREDICTED: probable beta-1,3-galactosylt	0.997	0.997	0.839	0.0
224069002		405	predicted protein [Populus trichocarpa]	0.997	0.997	0.871	0.0
297848780		407	galactosyltransferase family protein [Ar	1.0	0.995	0.818	0.0

>gi\|224128958\|ref\|XP_002320464.1\| predicted protein [Populus trichocarpa] gi\|222861237\|gb\|EEE98779.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/406 (87%), Positives = 378/406 (93%), Gaps = 2/406 (0%)

Query: 1   MSLKSKG-ELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLK 59
           MS KS+G + +S++V+S+KW    CL CFCAG+ F NRMW VPE KG TRTT MEAE LK
Sbjct: 1   MSFKSRGDQQSSKNVISKKWALFFCLACFCAGVFFNNRMWTVPEPKGITRTTTMEAESLK 60

Query: 60  LVSEGCNPRLQKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGS 119
           LVSEGC   +++V R DSKDI GEV+KTHNAIQTLDKTISNLEMELAAARAAQESILSGS
Sbjct: 61  LVSEGCGDEIKEVKR-DSKDIIGEVYKTHNAIQTLDKTISNLEMELAAARAAQESILSGS 119

Query: 120 PLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRF 179
           PLSEDLK+T SSGKRRYLMVVGINTAFSSRKRRDSVRATW  QGEKRK+LE+EKGII+RF
Sbjct: 120 PLSEDLKRTGSSGKRRYLMVVGINTAFSSRKRRDSVRATWFPQGEKRKKLEDEKGIIVRF 179

Query: 180 VIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVK 239
           VIGHSATSGGILDRAIEAEDRKHGDF+RLDHVEGYLELSAKTKIYFATAV+LWDADFYVK
Sbjct: 180 VIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKIYFATAVALWDADFYVK 239

Query: 240 VDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFR 299
           VDDDVHVNIATLG+TLVRHR KPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGN+YFR
Sbjct: 240 VDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNKYFR 299

Query: 300 HATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCE 359
           HATGQLYAISKDLA YISINQH+LHKYANEDVSLGSWFIGLDV+HIDDRRLCCGTPPDCE
Sbjct: 300 HATGQLYAISKDLATYISINQHLLHKYANEDVSLGSWFIGLDVDHIDDRRLCCGTPPDCE 359

Query: 360 WKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF 405
           WKAQAGNICVASFDW+CSGICRSADRIKEVHRRCGEGE ALW ATF
Sbjct: 360 WKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWRATF 405

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225447013\|ref\|XP_002268282.1\| PREDICTED: probable beta-1,3-galactosyltransferase 2 [Vitis vinifera] gi\|297739150\|emb\|CBI28801.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449453504\|ref\|XP_004144497.1\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449493139\|ref\|XP_004159203.1\| PREDICTED: LOW QUALITY PROTEIN: probable beta-1,3-galactosyltransferase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|359494046\|ref\|XP_002279828.2\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356542818\|ref\|XP_003539862.1\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max]	Back alignment and taxonomy information

>gi\|356517642\|ref\|XP_003527496.1\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max]	Back alignment and taxonomy information

>gi\|359494044\|ref\|XP_002279814.2\| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 1 [Vitis vinifera] gi\|297737446\|emb\|CBI26647.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224069002\|ref\|XP_002302876.1\| predicted protein [Populus trichocarpa] gi\|222844602\|gb\|EEE82149.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297848780\|ref\|XP_002892271.1\| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi\|297338113\|gb\|EFH68530.1\| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		405
TAIR\|locus:2207225		407	AT1G05170 [Arabidopsis thalian	1.0	0.995	0.793	3.4e-180
TAIR\|locus:2062545		409	AT2G32430 [Arabidopsis thalian	1.0	0.990	0.777	2.8e-176
TAIR\|locus:2116452		407	AT4G26940 [Arabidopsis thalian	0.995	0.990	0.728	6.5e-161
TAIR\|locus:2027352		384	AT1G11730 [Arabidopsis thalian	0.765	0.807	0.680	2e-132
TAIR\|locus:2038031		399	AT1G32930 [Arabidopsis thalian	0.958	0.972	0.616	4.4e-132
TAIR\|locus:2029471		393	AT1G77810 [Arabidopsis thalian	0.925	0.954	0.587	1.9e-124
TAIR\|locus:505006138		398	DD46 [Arabidopsis thaliana (ta	0.967	0.984	0.539	7.7e-119
TAIR\|locus:2154247		338	AT5G53340 [Arabidopsis thalian	0.639	0.766	0.463	2.1e-61
TAIR\|locus:2116627		345	AT4G32120 [Arabidopsis thalian	0.617	0.724	0.427	2.4e-51
TAIR\|locus:2059531		346	AT2G25300 [Arabidopsis thalian	0.617	0.722	0.423	3.6e-50

TAIR\|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1749 (620.7 bits), Expect = 3.4e-180, P = 3.4e-180
 Identities = 323/407 (79%), Positives = 359/407 (88%)

Query:     1 MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKL 60
             MS K KGE +SRS VS+KWT LLCLG FC GM FTNRMW +PESKG +  +  EAE+LKL
Sbjct:     1 MSAKIKGEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKL 60

Query:    61 VSEGCNPRL--QKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSG 118
             VSEGCNP+   QK V+ D + +FGEV  TH A+QTLDKTIS+LEMELAAAR+ QES+ +G
Sbjct:    61 VSEGCNPKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNG 120

Query:   119 SPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGXXXXXXXXXXGIIMR 178
             +PLS+D+ K +   +RR+LMVVGINTAFSSRKRRDS+RATWM QG          GII+R
Sbjct:   121 APLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIR 180

Query:   179 FVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYV 238
             FVIGHSAT+GGILDRAIEAEDRKHGDF+RLDHVEGYLELS KTK YF+TA S+WDADFYV
Sbjct:   181 FVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYV 240

Query:   239 KVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYF 298
             KVDDDVHVNIATLG+TLVRHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GN+YF
Sbjct:   241 KVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYF 300

Query:   299 RHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDC 358
             RHATGQLYAIS+DLA+YISINQHVLHKYANEDVSLG+WFIG+DV+HIDDRRLCCGTPPDC
Sbjct:   301 RHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDC 360

Query:   359 EWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF 405
             EWKAQAGNICVASFDW+CSGICRSADRIKEVHRRCGEGE ALWSATF
Sbjct:   361 EWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR\|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LEJ9	B3GT4_ARATH	2, ., 4, ., 1, ., -	0.7569	0.9703	0.9656	no	no
Q9ZV71	B3GT3_ARATH	2, ., 4, ., 1, ., -	0.7995	1.0	0.9902	no	no
A8MRC7	B3GT2_ARATH	2, ., 4, ., 1, ., -	0.8181	1.0	0.9950	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!
4th Layer	2.4.1.79	LOW CONFIDENCE prediction!
3rd Layer	2.4.1.134	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		405
PLN03193		408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	0.0
pfam01762		196	pfam01762, Galactosyl_T, Galactosyltransferase	2e-63
pfam13334		89	pfam13334, DUF4094, Domain of unknown function (DU	8e-40
PLN03133		636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	8e-08

>gnl\|CDD\|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional	Back alignment and domain information

 Score =  832 bits (2150), Expect = 0.0
 Identities = 366/408 (89%), Positives = 389/408 (95%), Gaps = 3/408 (0%)

Query: 1   MSLKSKGEL-TSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLK 59
           MS KS+GE  +SRSVVS+KWT LLCLGCFCAGMLFT+RMW +PESKG +RTT  EAE+LK
Sbjct: 1   MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLK 60

Query: 60  LVSEGCNPRL--QKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILS 117
           LVSEGC+P+   QK V+ DSKDI GEV KTHNAIQTLDKTISNLEMELAAARAAQESIL+
Sbjct: 61  LVSEGCDPKTLYQKEVKRDSKDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILN 120

Query: 118 GSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIM 177
           GSP+SEDLKKT+SSGKRRYLMVVGINTAFSSRKRRDSVRATWM QGEKRK+LEEEKGII+
Sbjct: 121 GSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIII 180

Query: 178 RFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFY 237
           RFVIGHSATSGGILDRAIEAEDRKHGDF+RLDHVEGYLELSAKTK YFATAV++WDADFY
Sbjct: 181 RFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY 240

Query: 238 VKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRY 297
           VKVDDDVHVNIATLG+TLVRHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GN+Y
Sbjct: 241 VKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKY 300

Query: 298 FRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPD 357
           FRHATGQLYAISKDLA+YISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPD
Sbjct: 301 FRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPD 360

Query: 358 CEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF 405
           CEWKAQAGNICVASFDW+CSGICRSADRIKEVHRRCGEGENALWSATF
Sbjct: 361 CEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSATF 408

Length = 408

>gnl\|CDD\|216686 pfam01762, Galactosyl_T, Galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094)	Back alignment and domain information

>gnl\|CDD\|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		405
PLN03193		408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2288		274	consensus Galactosyltransferases [Carbohydrate tra	100.0
PLN03133		636	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2287		349	consensus Galactosyltransferases [Carbohydrate tra	100.0
PF01762		195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
PTZ00210		382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	100.0
PF13334		95	DUF4094: Domain of unknown function (DUF4094)	99.95
PF02434		252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.76
KOG2246		364	consensus Galactosyltransferases [Carbohydrate tra	99.6
PLN03153		537	hypothetical protein; Provisional	99.03
KOG3708		681	consensus Uncharacterized conserved protein [Funct	97.3
PF01755		200	Glyco_transf_25: Glycosyltransferase family 25 (LP	95.37
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	95.13
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	94.94
cd04192		229	GT_2_like_e Subfamily of Glycosyltransferase Famil	94.02
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	93.78
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	93.32
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	92.73
cd04196		214	GT_2_like_d Subfamily of Glycosyltransferase Famil	92.41
PF13506		175	Glyco_transf_21: Glycosyl transferase family 21	92.38
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	91.89
PRK11204		420	N-glycosyltransferase; Provisional	91.76
PF00535		169	Glycos_transf_2: Glycosyl transferase family 2; In	91.48
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	90.72
cd06433		202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	88.53
cd06423		180	CESA_like CESA_like is the cellulose synthase supe	87.95
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	87.77
cd04187		181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	87.44
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	86.83
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	86.7
cd06532		128	Glyco_transf_25 Glycosyltransferase family 25 [lip	86.49
cd04184		202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	85.14
PRK14583		444	hmsR N-glycosyltransferase; Provisional	84.8
PF13632		193	Glyco_trans_2_3: Glycosyl transferase family group	84.69
cd06434		235	GT2_HAS Hyaluronan synthases catalyze polymerizati	83.95
cd04185		202	GT_2_like_b Subfamily of Glycosyltransferase Famil	82.18
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	81.42
cd06435		236	CESA_NdvC_like NdvC_like proteins in this family a	80.63

>PLN03193 beta-1,3-galactosyltransferase; Provisional	Back alignment and domain information

Probab=100.00  E-value=4.6e-112  Score=851.79  Aligned_cols=404  Identities=90%  Similarity=1.440  Sum_probs=374.9

Q ss_pred             CCccccc-ccCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCcCccccccchhhhhhhhhccCCCCccc---cccccCC
Q 015521            1 MSLKSKG-ELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRL---QKVVRHD   76 (405)
Q Consensus         1 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   76 (405)
                      ||.|+|| ++.+|+.||+||+++||++|||+|++|++|||..||..+..++++..++++++++++|+.++   +. .+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~~~   79 (408)
T PLN03193          1 MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLKLVSEGCDPKTLYQKE-VKRD   79 (408)
T ss_pred             CCcccccccccccccccHHHHHHHHHHHHHHHHhhccccccCCccccccccccchhhhhhhhccccccccccccc-cccc
Confidence            8999999 77899999999999999999999999999999999999888878888999999999999765   22 2468


Q ss_pred             cchhhhhhhhhHHHHHhhhhhHHHHHHHHHHHHhhhccccCCCCCcccccccCCCCCCCeeEEEEEECCCCCHHHHHHHH
Q 015521           77 SKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVR  156 (405)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llI~V~Sa~~~~~rR~aIR  156 (405)
                      ++|||+||++||+|||+|+|+|+.||||||+|++.+..+.++.|.++.....+...+++++|||+|+|+|+|++||++||
T Consensus        80 ~~~~~~~~~~t~~~~~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR  159 (408)
T PLN03193         80 SKDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVR  159 (408)
T ss_pred             hhHHHHHHhhHHHHHHHHhhhhhHHhHHHHHHHhhhhhhccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999997766666666543222223455778999999999999999999999


Q ss_pred             HHHHhhhhhhhhcccCCcEEEEEEeecCCCCCChhHHHHHHHHhhcCCeEeccCCccccchhHHHHHHHHHHHhccCcce
Q 015521          157 ATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADF  236 (405)
Q Consensus       157 eTW~~~~~~l~~l~~~~~v~v~FviG~s~~~~~~~~~~L~~E~~~~~DIL~ld~~DsY~nLt~Kt~~~~~wa~~~~~a~f  236 (405)
                      +|||+.++.+.+++...+|+++||||++.++++.++++|++|+++|||||++||+|+|.|||.||+++|+||.++++++|
T Consensus       160 ~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF  239 (408)
T PLN03193        160 ATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADF  239 (408)
T ss_pred             HHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeE
Confidence            99999887777777789999999999998767789999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCceEeeHHHHHHHHHhcCCCCCeEEEEeccCccccCCCCccccCcccccCCCCCCCCCCCCCCceeeCHHHHHHH
Q 015521          237 YVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYI  316 (405)
Q Consensus       237 vlKvDDDvfVn~~~L~~~L~~~~~~~~lYiG~~~~gpv~r~~~~Kwy~pe~~~fgd~~~~Yp~y~~G~gYvLS~dla~~I  316 (405)
                      |+|+|||+|||+++|+.+|+.++.++++|+|||+++|++.+++.|||+|++|+||++++.|||||+|++||||+|+|++|
T Consensus       240 ~mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I  319 (408)
T PLN03193        240 YVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYI  319 (408)
T ss_pred             EEEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHH
Confidence            99999999999999999999887778999999998988877889999999999998899999999999999999999999


Q ss_pred             HHhccccCCCCcchHHHHHHHhhCCCeeecCCCcccCCCCCcccccccCCccccccccccccccCcHHHHHHHHHHccCC
Q 015521          317 SINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEG  396 (405)
Q Consensus       317 ~~~~~~l~~~~~EDV~vG~~l~~L~v~~~~~~~f~~~~~~~cewk~~~~~~c~~~~~~~~sgic~~~~~m~~vH~~~~e~  396 (405)
                      +.+...++.|++||||+|+||++|+|+|+||++|||+++|+|+||+++|++|+++|||+|||||+|++||+++|++|+|+
T Consensus       320 ~~n~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~~~~~~csg~c~~~~~~~~~h~~c~~~  399 (408)
T PLN03193        320 SINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEG  399 (408)
T ss_pred             HhChhhhcccCcchhhhhhHhccCCceeeecccccCCCCccccccccCCCeeEEEecccCcccCCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCC
Q 015521          397 ENALWSATF  405 (405)
Q Consensus       397 ~~~~w~~~~  405 (405)
                      ++|+|+++|
T Consensus       400 ~~~~~~~~~  408 (408)
T PLN03193        400 ENALWSATF  408 (408)
T ss_pred             cccceeecC
Confidence            999999987

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN03133 beta-1,3-galactosyltransferase; Provisional	Back alignment and domain information

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional	Back alignment and domain information

>PF13334 DUF4094: Domain of unknown function (DUF4094)	Back alignment and domain information

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []	Back alignment and domain information

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN03153 hypothetical protein; Provisional	Back alignment and domain information

>KOG3708 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>PF13506 Glyco_transf_21: Glycosyl transferase family 21	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis	Back alignment and domain information

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis	Back alignment and domain information

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis	Back alignment and domain information

>PRK14583 hmsR N-glycosyltransferase; Provisional	Back alignment and domain information

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2	Back alignment and domain information

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan	Back alignment and domain information

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		405
2j0a_A		280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	6e-05

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280	Back alignment and structure

 Score = 43.6 bits (102), Expect = 6e-05
 Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 25/176 (14%)

Query: 139 VVGINTAFSS-RKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEA 197
            + + T ++  R R D +  TW               I  +  I   +      D  ++ 
Sbjct: 16  FIAVKTTWAFHRSRLDLLLDTW------------VSRIRQQTFIFTDSP-----DERLQE 58

Query: 198 EDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVR 257
               H    +      +  LS K    F     +    ++  VDDD +VN   L Q L  
Sbjct: 59  RLGPHLVVTQCSAEHSHPALSCKMAAEFDA-FLVSGLRWFCHVDDDNYVNPKALLQLLKT 117

Query: 258 HRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLA 313
                 VY+G       ++   ++  +           R++    G  + I++ LA
Sbjct: 118 FPQDRDVYVGKPSLNRPIHASELQSKQRTKL------VRFWFATGGAGFCINRQLA 167

PyMOL of 2j0a

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		405
2j0a_A		280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.91
1xhb_A		472	Polypeptide N-acetylgalactosaminyltransferase 1; g	93.18
2d7i_A		570	Polypeptide N-acetylgalactosaminyltransferase 10;	92.31
1qg8_A		255	Protein (spore coat polysaccharide biosynthesis P	91.01
2ffu_A		501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	90.98
4fix_A		657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	89.27
3bcv_A		240	Putative glycosyltransferase protein; protein stru	87.87
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	85.41

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*	Back alignment and structure

Probab=99.91  E-value=2.9e-24  Score=209.06  Aligned_cols=195  Identities=17%  Similarity=0.164  Sum_probs=132.2

Q ss_pred             CCeeEEEEEECCCC-CHHHHHHHHHHHHhhhhhhhhcccCCcEEEEEEeecCCCCCChhHHHHHHHHhhcCCeEeccCCc
Q 015521          134 RRYLMVVGINTAFS-SRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVE  212 (405)
Q Consensus       134 ~~~~llI~V~Sa~~-~~~rR~aIReTW~~~~~~l~~l~~~~~v~v~FviG~s~~~~~~~~~~L~~E~~~~~DIL~ld~~D  212 (405)
                      ..-.|+|+|+|+++ +..|+++||+||++....        .   .||.+...  +    ..+...  ..++++..++.+
T Consensus        11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~--------~---~fifsd~~--d----~~l~~~--~~~~~~~~~~~~   71 (280)
T 2j0a_A           11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ--------Q---TFIFTDSP--D----ERLQER--LGPHLVVTQCSA   71 (280)
T ss_dssp             CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG--------G---EEEEESSC--C----HHHHHH--HGGGEEECCC--
T ss_pred             CcccEEEEEECcHHHHHHHHHHHHHHHhccCCC--------c---eEEEcCCC--c----cccccc--ccccceeccccc
Confidence            34678899999998 557889999999987521        1   24333322  1    223322  245788877644


Q ss_pred             --cccchhHHHHHHHHHHHhccCcceEEEeCCceEeeHHHHHHHHHhcCCCCCeEEEEeccCccccCCCCccccCccccc
Q 015521          213 --GYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKF  290 (405)
Q Consensus       213 --sY~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVn~~~L~~~L~~~~~~~~lYiG~~~~gpv~r~~~~Kwy~pe~~~f  290 (405)
                        ++.+++.|+...+++.. +.+++||+|+|||+|||+++|+++|..+.+..++|+|......+++   .+++.|...+ 
T Consensus        72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~~-  146 (280)
T 2j0a_A           72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQRT-  146 (280)
T ss_dssp             -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred             cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCccccc-
Confidence              67889999999988654 3599999999999999999999999999888899999865332322   1345443222 


Q ss_pred             CCCCCCCCCCC-CCCceeeCHHHHHHHHHhcccc-------CCCCcchHHHHHHHh-hCCCeeecCCCcccCCC
Q 015521          291 GEAGNRYFRHA-TGQLYAISKDLAAYISINQHVL-------HKYANEDVSLGSWFI-GLDVEHIDDRRLCCGTP  355 (405)
Q Consensus       291 gd~~~~Yp~y~-~G~gYvLS~dla~~I~~~~~~l-------~~~~~EDV~vG~~l~-~L~v~~~~~~~f~~~~~  355 (405)
                        +...| +|| +|+|||||+++++.|+......       .....||+++|.|+. .+||...+.+.|....+
T Consensus       147 --~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~  217 (280)
T 2j0a_A          147 --KLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE  217 (280)
T ss_dssp             ------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred             --ccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence              12244 466 5789999999999999754322       223469999999998 99999999999987543

PyMOL of 2j0a

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17	Back alignment and structure

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*	Back alignment and structure

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*	Back alignment and structure

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*	Back alignment and structure

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*	Back alignment and structure

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		405
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	89.63

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.63  E-value=3.6  Score=36.40  Aligned_cols=159  Identities=14%  Similarity=0.109  Sum_probs=81.6

Q ss_pred             EEEEEeecCCCCCChhHHHHHHHHhhcCCeE-eccCCccccchhHHHHHHHHHHHhccCcceEEEeCCceEeeHHHHHHH
Q 015521          176 IMRFVIGHSATSGGILDRAIEAEDRKHGDFM-RLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQT  254 (405)
Q Consensus       176 ~v~FviG~s~~~~~~~~~~L~~E~~~~~DIL-~ld~~DsY~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVn~~~L~~~  254 (405)
                      .|+.|=..|.  ++.....+++-.+++.+-+ .+...++. ..+    .+.+.+.+....+|++.+|+|+.+.++.|..+
T Consensus        56 EIIvVDdgS~--d~~~~~~l~~~~~~~~~~i~vi~~~~n~-G~~----~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l  128 (328)
T d1xhba2          56 EIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRS-GLI----RARLKGAAVSRGQVITFLDAHCECTAGWLEPL  128 (328)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCC-CHH----HHHHHHHHHCCSSEEEEEESSEEECTTCHHHH
T ss_pred             EEEEEECCCC--hhhHHHHHHHHHHhcCCCeEEEEecccc-cch----HHHHHHHHhhhcceeeecCcccccChhHHHHH
Confidence            4555543332  3344444544445555533 33333222 222    25566666678999999999999999888777


Q ss_pred             HHhcCCCCCeEE-EEec--cC---------ccccC-----CCCccc-cCccc---ccCC-CCCCCCCCCCCCceeeCHHH
Q 015521          255 LVRHRSKPRVYI-GCMK--SG---------PVLNQ-----KGVRYH-EPEYW---KFGE-AGNRYFRHATGQLYAISKDL  312 (405)
Q Consensus       255 L~~~~~~~~lYi-G~~~--~g---------pv~r~-----~~~Kwy-~pe~~---~fgd-~~~~Yp~y~~G~gYvLS~dl  312 (405)
                      +......+...+ |...  .+         +..+.     ....|+ .|...   ...+ .....-+++.|+++++++++
T Consensus       129 ~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  208 (328)
T d1xhba2         129 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY  208 (328)
T ss_dssp             HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred             HHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHH
Confidence            655432232222 2211  10         00000     001111 11100   0000 01122346789999999999


Q ss_pred             HHHHHHhccccCCCCcchHHHHHHHhhCC
Q 015521          313 AAYISINQHVLHKYANEDVSLGSWFIGLD  341 (405)
Q Consensus       313 a~~I~~~~~~l~~~~~EDV~vG~~l~~L~  341 (405)
                      ...+---...+..+..||+-++.-+...|
T Consensus       209 f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G  237 (328)
T d1xhba2         209 FQEIGTYDAGMDIWGGENLEISFRIWQCG  237 (328)
T ss_dssp             HHHTTSCCTTSCTTCCCCSHHHHHHHHTT
T ss_pred             HHHhCCCCCCCcCcCchHHHHHHHHHHhC
Confidence            99875433444445579988776554444

PyMOL of d1xhba2