Citrus Sinensis ID: 015524


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
MLQSQKPRRRCEGTAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVDIFLGLIALPRNPFL
ccccccccccccccccccEEEEEEcccccccEEccccHHHHHHHHHcccccccEEEEEEcccccccccEEEEcccccEEEEEcccccEEEEEEEEEccccEEEEccccccccccccHHEEEHHHccccccccccccccEEEEEEccEEEEEEcccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccEEEEEEEccccEEEEEEccccccccccHHHHHHHHccccEEEEccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEcccccccccccEEEEEEEEEccccccccccccccccEEccccccHHHHHHHccccccccccccccccccccEEEEEccccEEEEEccccEEEccccccc
ccccccccccccccccccEEEEEccccccccEEccccHHHHHHHHHHccccccEEEEEEcccccccccEEEEEccccEEEEEcccccEEEEEEEEEccEEEEEEccEEcccccccccHHHHHHHccccccccccccccEEEEEcccEEEEEcccccccccccccccccccccccccccccEEEEEEcccccccccccccHHHccccccccccEEEEEcccccccEEEEEEccEEEEccccHHHHHHHHcccccEEEcccccEEEEccccccccccccccHEEHHHcccEEEEEEccccEEEEEEEEcccccccccccEEccEEEEEEcccccccccccccccEEcccccHHHHHHHHcccccccEEEccccccccccEEEEccccEEEEEEEEEEcccccccccc
mlqsqkprrrcegtamgaivldlrpgvgigpfslgmpiceafasieqqpniydvvhvkyfdeeplkldiiisfpdhgfhlrfdpwsqRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALfgptfpgvydkerSVYMLfypglsfafpipaqyadccqdreaelplefpdgttpvtcrvsiydgsadkkvgvgslfdkaiapslpvgslYIEEVHAKLGEelhftvgsqhipfgaspqdvwtelgrpcgihqkqvDQMVIhsasdprprstlcgdyfynyytrgldilfdgQTHKIKKFImhtnypghadfnsyiKCNFIIlgsdfagtsaevhsyknkitpntkWEQVKEILGDCGRAaiqtqgstsnpfgstfvygyqnIAFEVDIFLGlialprnpfl
mlqsqkprrrcegtamGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELplefpdgttpVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHsasdprprstLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYknkitpntkWEQVKEILGDCGRAAIQTqgstsnpfGSTFVYGYQNIAFEVDIFLGLIALPRNPFL
MLQSQKPRRRCEGTAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVDIFLGLIALPRNPFL
*************TAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIH********STLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVDIFLGLIAL******
********************LDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYAT*L****STLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQY*********************VTCRVSIYDGSADK******LF*KAIA*SLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQ******************YFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILG*****************TPNTKWE**************************TFVYGYQNIAFEVDIFLGLIALPRNPFL
**********CEGTAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVDIFLGLIALPRNPFL
*****KPRRRC**TAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRP**TLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDF*********YKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVDIFLGLIALPR***L
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MLQSQKPRRRCEGTAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVDIFLGLIALPRNPFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query405 2.2.26 [Sep-21-2011]
Q9SD33410 UPF0183 protein At3g51130 yes no 0.950 0.939 0.815 0.0
Q9VSH9438 UPF0183 protein CG7083 OS yes no 0.908 0.840 0.355 6e-58
O08654422 UPF0183 protein C16orf70 yes no 0.822 0.789 0.334 1e-51
Q9BSU1422 UPF0183 protein C16orf70 yes no 0.829 0.796 0.322 7e-51
Q922R1422 UPF0183 protein C16orf70 yes no 0.844 0.810 0.335 2e-50
P34692422 UPF0183 protein T01G9.2 O yes no 0.864 0.829 0.302 2e-38
>sp|Q9SD33|U183_ARATH UPF0183 protein At3g51130 OS=Arabidopsis thaliana GN=At3g51130 PE=2 SV=2 Back     alignment and function desciption
 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/390 (81%), Positives = 352/390 (90%), Gaps = 5/390 (1%)

Query: 2   LQSQKPRRRCEGTAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFD 61
           L  Q+PRRR EGTAMGA V DLRPGVGIGPFS+GMPICEAFA IEQQPNIYDVVHVKY+D
Sbjct: 11  LVMQRPRRRLEGTAMGATVFDLRPGVGIGPFSIGMPICEAFAQIEQQPNIYDVVHVKYYD 70

Query: 62  EEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAV 121
           E+PLKLD++ISFPDHGFHLRFDPWSQRLRL+EIFD+KRLQMRYATS+IGG STLATFVAV
Sbjct: 71  EDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIFDVKRLQMRYATSMIGGPSTLATFVAV 130

Query: 122 YALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTC 181
           YALFGPTFPG+YDKER +Y LFYPGLSF FPIP QY DCC D EA LPLEFPDGTTPVTC
Sbjct: 131 YALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPNQYTDCCHDGEAALPLEFPDGTTPVTC 190

Query: 182 RVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASP 241
           RVSIYD S+DKKVGVG L D+A  P LP GSLY+EEVH K G+EL+FTVG QH+PFGASP
Sbjct: 191 RVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYMEEVHVKPGKELYFTVGGQHMPFGASP 250

Query: 242 QDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIK 301
           QDVWTELGRPCGIH KQVDQMVIHSASDPRP++T+CGDYFYNY+TRGLDILFDG+THK+K
Sbjct: 251 QDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTTICGDYFYNYFTRGLDILFDGETHKVK 310

Query: 302 KFIMHTNYPGHADFNSYIKCNFII-LGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDC 360
           KF++HTNYPGHADFNSYIKCNF+I  G+D    +AE +   NKITP+T W+QVKEILG+C
Sbjct: 311 KFVLHTNYPGHADFNSYIKCNFVISAGAD----AAEANRSGNKITPSTNWDQVKEILGEC 366

Query: 361 GRAAIQTQGSTSNPFGSTFVYGYQNIAFEV 390
           G AAIQTQGSTSNPFGST+VYGYQN+AFEV
Sbjct: 367 GPAAIQTQGSTSNPFGSTYVYGYQNVAFEV 396





Arabidopsis thaliana (taxid: 3702)
>sp|Q9VSH9|U183_DROME UPF0183 protein CG7083 OS=Drosophila melanogaster GN=CG7083 PE=2 SV=1 Back     alignment and function description
>sp|O08654|CP070_RAT UPF0183 protein C16orf70 homolog OS=Rattus norvegicus PE=2 SV=1 Back     alignment and function description
>sp|Q9BSU1|CP070_HUMAN UPF0183 protein C16orf70 OS=Homo sapiens GN=C16orf70 PE=1 SV=1 Back     alignment and function description
>sp|Q922R1|CP070_MOUSE UPF0183 protein C16orf70 homolog OS=Mus musculus PE=2 SV=2 Back     alignment and function description
>sp|P34692|U183_CAEEL UPF0183 protein T01G9.2 OS=Caenorhabditis elegans GN=T01G9.2 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query405
359476646402 PREDICTED: UPF0183 protein At3g51130-lik 0.953 0.960 0.870 0.0
356538264403 PREDICTED: UPF0183 protein At3g51130-lik 0.953 0.957 0.850 0.0
357483667404 hypothetical protein MTR_5g021520 [Medic 0.953 0.955 0.845 0.0
224134150401 predicted protein [Populus trichocarpa] 0.933 0.942 0.855 0.0
356496677400 PREDICTED: UPF0183 protein At3g51130-lik 0.945 0.957 0.847 0.0
297735048389 unnamed protein product [Vitis vinifera] 0.925 0.964 0.869 0.0
224094913398 predicted protein [Populus trichocarpa] 0.920 0.937 0.851 0.0
449434186398 PREDICTED: UPF0183 protein At3g51130-lik 0.943 0.959 0.841 0.0
449491389398 PREDICTED: UPF0183 protein At3g51130-lik 0.943 0.959 0.841 0.0
388499418404 unknown [Medicago truncatula] 0.953 0.955 0.837 0.0
>gi|359476646|ref|XP_003631875.1| PREDICTED: UPF0183 protein At3g51130-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/386 (87%), Positives = 357/386 (92%)

Query: 5   QKPRRRCEGTAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEP 64
           Q+PRRRCEGTAMGAIVLDL+PG+GIGPFSLGMPI +AFA IEQQPNIYDVVHVKYFDEEP
Sbjct: 3   QRPRRRCEGTAMGAIVLDLKPGLGIGPFSLGMPISKAFAQIEQQPNIYDVVHVKYFDEEP 62

Query: 65  LKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYAL 124
           LKLDI+ISFPDHGFHLRFDPWSQRLRLIEIFD+KRLQMRYATSLIGG STLATFVAVYAL
Sbjct: 63  LKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSTLATFVAVYAL 122

Query: 125 FGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVS 184
           FGPTFPG YDK+R VY LFYPGLSFAFPIP QY DCC D EAELPLEFPDGTTPVTCRVS
Sbjct: 123 FGPTFPGSYDKDRGVYTLFYPGLSFAFPIPTQYTDCCHDGEAELPLEFPDGTTPVTCRVS 182

Query: 185 IYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDV 244
           IYD S D KVGVGS  +KA AP LP GSLY+EEVH KLGEEL FTVG QHIPFGASPQDV
Sbjct: 183 IYDSSTDSKVGVGSSMEKASAPPLPAGSLYMEEVHVKLGEELRFTVGGQHIPFGASPQDV 242

Query: 245 WTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFI 304
           WTELGRPCGIHQKQVDQMVIHSASDPRPR+TLCGDYFYNY+ RGLDILFDGQTHKIKKF+
Sbjct: 243 WTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFDRGLDILFDGQTHKIKKFV 302

Query: 305 MHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAA 364
           +HTNYPGHADFNSY+KCNF+I GSDF G+  EV   K++ITP+TKWEQVKEILGDCGRAA
Sbjct: 303 LHTNYPGHADFNSYMKCNFVIYGSDFGGSFQEVKMSKHRITPSTKWEQVKEILGDCGRAA 362

Query: 365 IQTQGSTSNPFGSTFVYGYQNIAFEV 390
           IQTQGST+NPFGSTFVYGYQN+AFEV
Sbjct: 363 IQTQGSTNNPFGSTFVYGYQNVAFEV 388




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538264|ref|XP_003537624.1| PREDICTED: UPF0183 protein At3g51130-like [Glycine max] Back     alignment and taxonomy information
>gi|357483667|ref|XP_003612120.1| hypothetical protein MTR_5g021520 [Medicago truncatula] gi|355513455|gb|AES95078.1| hypothetical protein MTR_5g021520 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224134150|ref|XP_002327768.1| predicted protein [Populus trichocarpa] gi|222836853|gb|EEE75246.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356496677|ref|XP_003517192.1| PREDICTED: UPF0183 protein At3g51130-like [Glycine max] Back     alignment and taxonomy information
>gi|297735048|emb|CBI17410.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224094913|ref|XP_002310289.1| predicted protein [Populus trichocarpa] gi|222853192|gb|EEE90739.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449434186|ref|XP_004134877.1| PREDICTED: UPF0183 protein At3g51130-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449491389|ref|XP_004158881.1| PREDICTED: UPF0183 protein At3g51130-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388499418|gb|AFK37775.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query405
TAIR|locus:2080873410 AT3G51130 [Arabidopsis thalian 0.950 0.939 0.815 5.4e-182
DICTYBASE|DDB_G0271880 519 DDB_G0271880 "UPF0183 family p 0.609 0.475 0.384 4.8e-56
RGD|621098422 RGD621098 "similar to RIKEN cD 0.365 0.350 0.440 3.7e-52
UNIPROTKB|Q9BSU1422 C16orf70 "UPF0183 protein C16o 0.390 0.374 0.424 1.6e-51
MGI|MGI:2443049422 D230025D16Rik "RIKEN cDNA D230 0.365 0.350 0.440 6.8e-51
FB|FBgn0035877438 CG7083 [Drosophila melanogaste 0.780 0.721 0.362 7.9e-46
WB|WBGene00011344422 T01G9.2a [Caenorhabditis elega 0.385 0.369 0.335 1.4e-36
UNIPROTKB|P34692422 T01G9.2 "UPF0183 protein T01G9 0.385 0.369 0.335 1.4e-36
ASPGD|ASPL0000038147 516 AN10404 [Emericella nidulans ( 0.318 0.25 0.310 1e-15
UNIPROTKB|G4MWK3 526 MGG_01174 "Uncharacterized pro 0.444 0.342 0.267 4.3e-13
TAIR|locus:2080873 AT3G51130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1766 (626.7 bits), Expect = 5.4e-182, P = 5.4e-182
 Identities = 318/390 (81%), Positives = 352/390 (90%)

Query:     2 LQSQKPRRRCEGTAMGAIVLDLRPGVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFD 61
             L  Q+PRRR EGTAMGA V DLRPGVGIGPFS+GMPICEAFA IEQQPNIYDVVHVKY+D
Sbjct:    11 LVMQRPRRRLEGTAMGATVFDLRPGVGIGPFSIGMPICEAFAQIEQQPNIYDVVHVKYYD 70

Query:    62 EEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAV 121
             E+PLKLD++ISFPDHGFHLRFDPWSQRLRL+EIFD+KRLQMRYATS+IGG STLATFVAV
Sbjct:    71 EDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIFDVKRLQMRYATSMIGGPSTLATFVAV 130

Query:   122 YALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTC 181
             YALFGPTFPG+YDKER +Y LFYPGLSF FPIP QY DCC D EA LPLEFPDGTTPVTC
Sbjct:   131 YALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPNQYTDCCHDGEAALPLEFPDGTTPVTC 190

Query:   182 RVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASP 241
             RVSIYD S+DKKVGVG L D+A  P LP GSLY+EEVH K G+EL+FTVG QH+PFGASP
Sbjct:   191 RVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYMEEVHVKPGKELYFTVGGQHMPFGASP 250

Query:   242 QDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIK 301
             QDVWTELGRPCGIH KQVDQMVIHSASDPRP++T+CGDYFYNY+TRGLDILFDG+THK+K
Sbjct:   251 QDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTTICGDYFYNYFTRGLDILFDGETHKVK 310

Query:   302 KFIMHTNYPGHADFNSYIKCNFII-LGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDC 360
             KF++HTNYPGHADFNSYIKCNF+I  G+D    +AE +   NKITP+T W+QVKEILG+C
Sbjct:   311 KFVLHTNYPGHADFNSYIKCNFVISAGAD----AAEANRSGNKITPSTNWDQVKEILGEC 366

Query:   361 GRAAIQTQGSTSNPFGSTFVYGYQNIAFEV 390
             G AAIQTQGSTSNPFGST+VYGYQN+AFEV
Sbjct:   367 GPAAIQTQGSTSNPFGSTYVYGYQNVAFEV 396




GO:0005739 "mitochondrion" evidence=ISM
GO:0006914 "autophagy" evidence=RCA
GO:0009610 "response to symbiotic fungus" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
DICTYBASE|DDB_G0271880 DDB_G0271880 "UPF0183 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
RGD|621098 RGD621098 "similar to RIKEN cDNA D230025D16Rik" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BSU1 C16orf70 "UPF0183 protein C16orf70" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2443049 D230025D16Rik "RIKEN cDNA D230025D16 gene" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0035877 CG7083 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00011344 T01G9.2a [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P34692 T01G9.2 "UPF0183 protein T01G9.2" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ASPGD|ASPL0000038147 AN10404 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4MWK3 MGG_01174 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VSH9U183_DROMENo assigned EC number0.35560.90860.8401yesno
Q922R1CP070_MOUSENo assigned EC number0.33500.84440.8104yesno
P34692U183_CAEELNo assigned EC number0.30270.86410.8293yesno
Q9SD33U183_ARATHNo assigned EC number0.81530.95060.9390yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query405
pfam03676395 pfam03676, UPF0183, Uncharacterized protein family 0.0
>gnl|CDD|217668 pfam03676, UPF0183, Uncharacterized protein family (UPF0183) Back     alignment and domain information
 Score =  520 bits (1340), Expect = 0.0
 Identities = 182/393 (46%), Positives = 236/393 (60%), Gaps = 41/393 (10%)

Query: 26  GVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPW 85
           G G   F LGMPI +A A I+QQP I   V VKY D++PL +D++I+ P  G  LRFDP 
Sbjct: 1   GNGQWEFVLGMPISQAIAIIQQQPRIIKNVQVKYSDKDPLSMDLVINLPQDGIRLRFDPV 60

Query: 86  SQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYP 145
           SQRL+LIE+FD+KR++++YA       S L T   VY  FG T PGVYD    +Y LF+ 
Sbjct: 61  SQRLKLIEVFDLKRVKLKYAGVYFNSPSVLPTIEQVYHSFGATHPGVYDASHQLYALFFR 120

Query: 146 GLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIA 205
           GLSF+FPI ++Y            L+FPDG TPV  R+SIYDGS            +A  
Sbjct: 121 GLSFSFPIDSKYTPGFGHGLGS--LKFPDGATPVVSRMSIYDGSN---------LAEAKV 169

Query: 206 PSLPV----GSLYIEEVHA------KLGEELHFTVG--------------SQHIPFGASP 241
           P LP+    G+LY+E V         LG +L                   ++HI FG S 
Sbjct: 170 PPLPLSCYLGNLYLESVEVLRDSGGTLGLKLQLVTEGGPGVALEPRVRTFTRHIYFGDSC 229

Query: 242 QDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIK 301
           QDV + LG PC +  K  D+M IHS SD R   + C DYF+NY+T GLDILFD QTH++K
Sbjct: 230 QDVLSALGSPCKVFYKSEDKMKIHSPSDHRLVQSKCSDYFFNYFTLGLDILFDAQTHRVK 289

Query: 302 KFIMHTNYPGHADFNSYIKCNFII-LGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDC 360
           KF++HTN+PGH +FN Y +CNF+I L +D  GT +   +    ITP +KW+QV EILG+ 
Sbjct: 290 KFVLHTNFPGHYNFNMYHRCNFVIQLPADKDGTDS--PTDSPPITPYSKWDQVSEILGNS 347

Query: 361 G-RAAIQTQGSTS--NPFGSTFVYGYQNIAFEV 390
           G R  +  + S++  NPFGSTF YGYQ+I FEV
Sbjct: 348 GERPVVLHRASSTNTNPFGSTFCYGYQDIIFEV 380


This family of proteins includes Lin-10 from C. elegans. Length = 395

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 405
PF03676394 UPF0183: Uncharacterised protein family (UPF0183); 100.0
KOG2819413 consensus Uncharacterized conserved protein [Funct 100.0
>PF03676 UPF0183: Uncharacterised protein family (UPF0183); InterPro: IPR005373 Members of this family are proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=3.2e-125  Score=957.50  Aligned_cols=362  Identities=46%  Similarity=0.836  Sum_probs=332.7

Q ss_pred             CCcccceecCCcHHHHHHHHHcCCCccceEEEEEcCCCCCccceEEEcCCCCeEEEecCCCCeEEEEEEeeCCcceEEEc
Q 015524           26 GVGIGPFSLGMPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYA  105 (405)
Q Consensus        26 G~gLG~f~LG~sL~~vl~~Lk~~~~~~~~v~i~Ys~~~Pl~~~Ivi~lp~~GirL~Fd~~~QRL~lIEV~d~~~~~L~Y~  105 (405)
                      |.++|+|+|||||||||++||+++++||+|||+||+++|+..||||+||++||||+|||++||||||||+||++++|+|+
T Consensus         1 ~~~~g~f~LG~~l~~vl~~lk~~~~~~~~v~~~Y~~~~P~~~~ivi~l~~~GirL~Fd~~~QrL~lIEv~d~~~i~L~Y~   80 (394)
T PF03676_consen    1 GNSLGEFVLGMSLHQVLTILKSEPQTFPKVDLIYSDQDPLSSDIVINLPENGIRLRFDGPSQRLRLIEVYDFSKIKLRYK   80 (394)
T ss_pred             CCccceEEcCCcHHHHHHHHHhccccCCceEEEECCCCCCcCCEEEEcCCCCeEEEECCCCcEEEEEEEecCccceEEeC
Confidence            77999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCccceeeeeccccCCCCCCccCCCCcEEEEeeCceEEEEeCCcccccccccccCCcccccCCCCCcceeEEEE
Q 015524          106 TSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSI  185 (405)
Q Consensus       106 ~~~~~~~~~~~tf~~Iy~~FGPTyPG~y~~~~~~Y~LsYpGlaF~Fpi~~~~~~~~~~~~~~l~l~f~~~~~p~~~~m~I  185 (405)
                      +++|++|++.|||++||++|||||||+||+++++|+||||||||+||+++++++.+.++.+  +++++++++|+|++|+|
T Consensus        81 ~~~~~~p~~~pTf~~Iy~~FGPTyPG~yd~~~~~YvLsYpGlaF~Fpi~~~~~~~~~~~~~--sl~~~~~ssp~~tsmaI  158 (394)
T PF03676_consen   81 GSVFSSPEIGPTFRHIYRLFGPTYPGEYDKSRGTYVLSYPGLAFSFPIPSKFQSSYSDGLD--SLEFPSGSSPVATSMAI  158 (394)
T ss_pred             cccccCcccCcchheeheccCCCCCCccCCCCCEEEEEECCEEEEeeCchhhcccccCCcc--eeecCCCCCcceeEEEE
Confidence            9999999999999999999999999999999999999999999999999988888887753  88999999999999999


Q ss_pred             eeCCCCcccccCCcccccCCCCCCC----CCeEEEEEEEEcC------CcEEEEecc--------------eEEEcCCCH
Q 015524          186 YDGSADKKVGVGSLFDKAIAPSLPV----GSLYIEEVHAKLG------EELHFTVGS--------------QHIPFGASP  241 (405)
Q Consensus       186 ~~~~~~~~v~~G~s~~e~~~p~l~~----~~~~~e~v~v~~~------~~l~f~~~~--------------~~I~~G~T~  241 (405)
                      |         +|++|++++.|++|.    +++|+++|+|...      .++.|....              ++|+||+||
T Consensus       159 f---------~G~s~~ear~p~lp~~~~~~~~~~~~v~v~~~~~~~~~~~l~l~~~~g~~~~~~~~~~~~~~~I~fGdT~  229 (394)
T PF03676_consen  159 F---------SGSSWAEARAPPLPLSCYCGNLYLESVEVLRDNKETVGLELSLVTEGGPGRIEEPRRSNFERWIRFGDTP  229 (394)
T ss_pred             E---------cCCchhcccCCCccccccCCCcceeeEEeeccCCCCcCcEEEEEEcCCCcccccccccCceEEEEeCCCH
Confidence            9         999999999987764    8889999988433      245544332              699999999


Q ss_pred             HHHHHhcCCCCccccccCCceeeccCCCCCCCCCccCcceeeecccceeEEEeCCcceEEEEEeeeCCCCCcCCCcceee
Q 015524          242 QDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKC  321 (405)
Q Consensus       242 QDV~~eLG~P~~if~K~ddrm~IH~~~~~~~~~~~~~dyFyNYF~lGlDiLfd~~t~~v~K~ILHtN~PG~y~Fn~Y~RC  321 (405)
                      |||++|||||++||||+||||+||++++.+...+..+|||||||+||||||||++||+|||||||||+||||+||+|+||
T Consensus       230 qdv~~~lG~P~~~~~k~~d~m~ih~~~~~~~~~~~~~~yf~nYf~~G~Dilfd~~~~~v~K~ILHtN~PG~~~Fn~y~rC  309 (394)
T PF03676_consen  230 QDVLSELGPPDRIFYKSDDRMSIHSPSSHKQVPSKPSDYFYNYFTLGLDILFDGNTHRVKKFILHTNIPGHYDFNRYNRC  309 (394)
T ss_pred             HHHHHhhCCccceeecccccccccccccccCCccCCCCEEEeccccceEEEEeCCCceEEEEEEecCCCCCccccceeee
Confidence            99999999999999999999999999888777788899999999999999999999999999999999999999999999


Q ss_pred             eEEEeccCCCCCcccccCcccccCCCCChhHHHhhhCCCC-CceEecCCCCC--CCCcceEEeeeCCeEEEEEcCCCccc
Q 015524          322 NFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCG-RAAIQTQGSTS--NPFGSTFVYGYQNIAFEVDIFLGLIA  398 (405)
Q Consensus       322 ~w~I~~~~~~~~~~~~~~~~~~it~~~~~d~i~~~l~~~~-rpvvLnR~~~~--nPfGsT~lYG~~~iifEVm~~N~~Ia  398 (405)
                      ||+|....++..+ +.......|+++++||+|++.|++.. |||||||++.+  ||||+|+||||+||||||| +||+||
T Consensus       310 ~f~I~~~~~~~~~-~~~~~~~~i~~~~kwd~i~~~L~~~~~~pvvl~r~s~~n~npfGsT~~yG~~~~IfEVm-~n~~Ia  387 (394)
T PF03676_consen  310 NFEIELSNDSNET-DSPTNSPMITPYTKWDDIQEILGKAEDRPVVLNRASSSNDNPFGSTFLYGYQGIIFEVM-KNGHIA  387 (394)
T ss_pred             eeEEEecCccccc-ccccccceeeccCCHhHhHHhhcccccCCcccccccccCCCCCcceeEeCCCCEEEEEe-cCCcEE
Confidence            9999997643321 22222335999999999999997655 99999999876  9999999999999999999 999999


Q ss_pred             cC
Q 015524          399 LP  400 (405)
Q Consensus       399 s~  400 (405)
                      |.
T Consensus       388 sV  389 (394)
T PF03676_consen  388 SV  389 (394)
T ss_pred             EE
Confidence            85



>KOG2819 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query405
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 58.3 bits (140), Expect = 2e-09
 Identities = 73/443 (16%), Positives = 124/443 (27%), Gaps = 142/443 (32%)

Query: 20  VLDLRPGVGIGPFSLGMPIC-------EAFASIEQQPNIYDVVH---VKYFDEEPLKLDI 69
           +L+LRP   +     G+          +   S + Q  +   +    +K  +     L++
Sbjct: 144 LLELRPAKNVLID--GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201

Query: 70  IISF-----------PDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLI--------- 109
           +               DH  +++    S +  L  +         Y   L+         
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL----KSKPYENCLLVLLNVQNAK 257

Query: 110 ------GGSSTLAT--FVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCC 161
                      L T  F  V              +    M   P    +  +  +Y DC 
Sbjct: 258 AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD-HHSMTLTPDEVKS--LLLKYLDC- 313

Query: 162 QDREAELPLEFPDGTTPVTCRV---SIYDGSA----------DK-----KVGVGSL---- 199
             R  +LP E      P    +   SI DG A          DK     +  +  L    
Sbjct: 314 --RPQDLPREVLTTN-PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370

Query: 200 ----FDK-AIAPS---LPVGSLYI------EEVHAKLGEELH-----------FTVGSQH 234
               FD+ ++ P    +P   L +      +     +  +LH            T+    
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI---S 427

Query: 235 IPFGASPQDVWTELGRPC----GIHQKQVDQMVIHSASDPRPRSTLCGD-YFYNYYTRGL 289
           IP       ++ EL         +H+  VD   I    D         D YFY++    L
Sbjct: 428 IP------SIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481

Query: 290 DILFDGQTHKIKKF-------------IMHTNYPGHADFNSYIKCNFIILGSDFAGTSAE 336
             +      ++  F             I H +   +A                   T  +
Sbjct: 482 KNI--EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS-------------GSILNTLQQ 526

Query: 337 VHSYKNKITPN-TKWEQ-VKEIL 357
           +  YK  I  N  K+E+ V  IL
Sbjct: 527 LKFYKPYICDNDPKYERLVNAIL 549


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00