Citrus Sinensis ID: 015562

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400----
MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF
ccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHccccccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHcccccccccccccccccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEcccccEEcHHHHHHHHHcccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHHcccEEEcccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHcHHHHHHcccccc
ccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccccccEEEEEEEEcccccHHHHHHHHHHHcccHHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEccccccccccccEEEcccEEEcccccccccccccccEEEEcHHHHHHHHHccHHHHHHcHccccHHHHHHcccEEEEcccHHcccccccccEEcccccEEEEEEcccccccccHHHHHHHHHHHcccccccEEEEcc
mslkskgeltsrsvVSQKWTFLLCLGcfcagmlftnrmwavpeskgftrTTAMEAEKLKLVsegcnprlkvvrhdsKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESilsgsplsedlkktessgkrRYLMVVGINTafssrkrrdSVRATWMLQGEKRKRLEEEKGIIMRFVIghsatsggilDRAIeaedrkhgdfmrlDHVEGYLELSAKTKIYFATAVSlwdadfyvkvdddVHVNIATLGQTlvrhrskprvyigcmksgpvlnqkgvryhepeywkfgeagnryfrHATGQLYAISKDLAAYISINQHVLHKyanedvslgswfigldvehiddrrlccgtppdcewkaqagnicvasfdwtcsgicrsaDRIKEVHRRCGEGENALWSATF
mslkskgeltsrsvvsqKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKlklvsegcnprlKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQesilsgsplsedlkktessgkrrylmvvgintafssrkrrdsvratwmlqgekrkrleeekGIIMRfvighsatsggILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIAtlgqtlvrhrskprvyigcmksgpvlnqkgvRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHrrcgegenalwsatf
MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGekrkrleeekGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF
*************VVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLE********************************RYLMVVGINTAFS*******VRATWMLQ********EEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGE**********
******************WTFLLCLGCFCAGMLFTNRMWA******************************************VFKTHNAIQTLDKTISNLEME********************************LMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF
*************VVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSP***********GKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF
*************VVSQKWTFLLCLGCFCAGMLFTNRMWAVP***************LKLVSEGCNPRLKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQE*******************KRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRLKVVRHDSKDIFGEVFKTHNAxxxxxxxxxxxxxxxxxxxxxQESILSGSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query404 2.2.26 [Sep-21-2011]
A8MRC7407 Probable beta-1,3-galacto yes no 1.0 0.992 0.815 0.0
Q9ZV71409 Probable beta-1,3-galacto no no 1.0 0.987 0.797 0.0
Q8LEJ9407 Probable beta-1,3-galacto no no 0.972 0.965 0.758 1e-177
Q9MAP8399 Probable beta-1,3-galacto no no 0.960 0.972 0.633 1e-148
Q9SAA4384 Probable beta-1,3-galacto no no 0.940 0.989 0.618 1e-146
Q6NQB7393 Beta-1,3-galactosyltransf no no 0.933 0.959 0.602 1e-141
Q9C809395 Probable beta-1,3-galacto no no 0.950 0.972 0.579 1e-134
Q9LM60398 Probable beta-1,3-galacto no no 0.975 0.989 0.553 1e-130
Q94F27338 Probable beta-1,3-galacto no no 0.641 0.766 0.478 5e-68
Q94A05345 Probable beta-1,3-galacto no no 0.623 0.730 0.431 1e-56
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1 Back     alignment and function desciption
 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/407 (81%), Positives = 368/407 (90%), Gaps = 3/407 (0%)

Query: 1   MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKL 60
           MS K KGE +SRS VS+KWT LLCLG FC GM FTNRMW +PESKG +  +  EAE+LKL
Sbjct: 1   MSAKIKGEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKL 60

Query: 61  VSEGCNPRL---KVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSG 117
           VSEGCNP+    K V+ D + +FGEV  TH A+QTLDKTIS+LEMELAAAR+ QES+ +G
Sbjct: 61  VSEGCNPKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNG 120

Query: 118 SPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMR 177
           +PLS+D+ K +   +RR+LMVVGINTAFSSRKRRDS+RATWM QGEKRKRLEEEKGII+R
Sbjct: 121 APLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIR 180

Query: 178 FVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYV 237
           FVIGHSAT+GGILDRAIEAEDRKHGDF+RLDHVEGYLELS KTK YF+TA S+WDADFYV
Sbjct: 181 FVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYV 240

Query: 238 KVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYF 297
           KVDDDVHVNIATLG+TLVRHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GN+YF
Sbjct: 241 KVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYF 300

Query: 298 RHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDC 357
           RHATGQLYAIS+DLA+YISINQHVLHKYANEDVSLG+WFIG+DV+HIDDRRLCCGTPPDC
Sbjct: 301 RHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDC 360

Query: 358 EWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF 404
           EWKAQAGNICVASFDW+CSGICRSADRIKEVHRRCGEGE ALWSATF
Sbjct: 361 EWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1 Back     alignment and function description
>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1 Back     alignment and function description
>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2 Back     alignment and function description
>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1 Back     alignment and function description
>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1 Back     alignment and function description
>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1 Back     alignment and function description
>sp|Q94A05|B3GTA_ARATH Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query404
224128958405 predicted protein [Populus trichocarpa] 1.0 0.997 0.876 0.0
225447013407 PREDICTED: probable beta-1,3-galactosylt 1.0 0.992 0.882 0.0
359494044405 PREDICTED: probable beta-1,3-galactosylt 1.0 0.997 0.841 0.0
224069002405 predicted protein [Populus trichocarpa] 1.0 0.997 0.874 0.0
449453504407 PREDICTED: probable beta-1,3-galactosylt 1.0 0.992 0.879 0.0
449493139407 PREDICTED: LOW QUALITY PROTEIN: probable 1.0 0.992 0.879 0.0
356542818406 PREDICTED: probable beta-1,3-galactosylt 0.995 0.990 0.840 0.0
359494046411 PREDICTED: probable beta-1,3-galactosylt 1.0 0.982 0.829 0.0
356517642407 PREDICTED: probable beta-1,3-galactosylt 0.997 0.990 0.845 0.0
15220440404 putative beta-1,3-galactosyltransferase 1.0 1.0 0.821 0.0
>gi|224128958|ref|XP_002320464.1| predicted protein [Populus trichocarpa] gi|222861237|gb|EEE98779.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/405 (87%), Positives = 377/405 (93%), Gaps = 1/405 (0%)

Query: 1   MSLKSKG-ELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLK 59
           MS KS+G + +S++V+S+KW    CL CFCAG+ F NRMW VPE KG TRTT MEAE LK
Sbjct: 1   MSFKSRGDQQSSKNVISKKWALFFCLACFCAGVFFNNRMWTVPEPKGITRTTTMEAESLK 60

Query: 60  LVSEGCNPRLKVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSP 119
           LVSEGC   +K V+ DSKDI GEV+KTHNAIQTLDKTISNLEMELAAARAAQESILSGSP
Sbjct: 61  LVSEGCGDEIKEVKRDSKDIIGEVYKTHNAIQTLDKTISNLEMELAAARAAQESILSGSP 120

Query: 120 LSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFV 179
           LSEDLK+T SSGKRRYLMVVGINTAFSSRKRRDSVRATW  QGEKRK+LE+EKGII+RFV
Sbjct: 121 LSEDLKRTGSSGKRRYLMVVGINTAFSSRKRRDSVRATWFPQGEKRKKLEDEKGIIVRFV 180

Query: 180 IGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKV 239
           IGHSATSGGILDRAIEAEDRKHGDF+RLDHVEGYLELSAKTKIYFATAV+LWDADFYVKV
Sbjct: 181 IGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKIYFATAVALWDADFYVKV 240

Query: 240 DDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRH 299
           DDDVHVNIATLG+TLVRHR KPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGN+YFRH
Sbjct: 241 DDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNKYFRH 300

Query: 300 ATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEW 359
           ATGQLYAISKDLA YISINQH+LHKYANEDVSLGSWFIGLDV+HIDDRRLCCGTPPDCEW
Sbjct: 301 ATGQLYAISKDLATYISINQHLLHKYANEDVSLGSWFIGLDVDHIDDRRLCCGTPPDCEW 360

Query: 360 KAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF 404
           KAQAGNICVASFDW+CSGICRSADRIKEVHRRCGEGE ALW ATF
Sbjct: 361 KAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWRATF 405

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225447013|ref|XP_002268282.1| PREDICTED: probable beta-1,3-galactosyltransferase 2 [Vitis vinifera] gi|297739150|emb|CBI28801.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494044|ref|XP_002279814.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 1 [Vitis vinifera] gi|297737446|emb|CBI26647.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224069002|ref|XP_002302876.1| predicted protein [Populus trichocarpa] gi|222844602|gb|EEE82149.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449453504|ref|XP_004144497.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449493139|ref|XP_004159203.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-1,3-galactosyltransferase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356542818|ref|XP_003539862.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|359494046|ref|XP_002279828.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356517642|ref|XP_003527496.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|15220440|ref|NP_172009.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gi|14488078|gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gi|2388580|gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gi|21360399|gb|AAM47315.1| At1g05170/YUP8H12_22 [Arabidopsis thaliana] gi|332189676|gb|AEE27797.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query404
TAIR|locus:2207225407 AT1G05170 [Arabidopsis thalian 1.0 0.992 0.791 1.9e-179
TAIR|locus:2062545409 AT2G32430 [Arabidopsis thalian 1.0 0.987 0.775 1.6e-175
TAIR|locus:2116452407 AT4G26940 [Arabidopsis thalian 0.997 0.990 0.730 1.5e-161
TAIR|locus:2027352384 AT1G11730 [Arabidopsis thalian 0.767 0.807 0.680 3.5e-139
TAIR|locus:2038031399 AT1G32930 [Arabidopsis thalian 0.960 0.972 0.618 2.7e-132
TAIR|locus:2029471393 AT1G77810 [Arabidopsis thalian 0.928 0.954 0.588 4.3e-125
TAIR|locus:505006138398 DD46 [Arabidopsis thaliana (ta 0.970 0.984 0.541 3.7e-119
TAIR|locus:2154247338 AT5G53340 [Arabidopsis thalian 0.641 0.766 0.463 2.1e-61
TAIR|locus:2116627345 AT4G32120 [Arabidopsis thalian 0.618 0.724 0.427 2.4e-51
TAIR|locus:2059531346 AT2G25300 [Arabidopsis thalian 0.618 0.722 0.423 3.6e-50
TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1742 (618.3 bits), Expect = 1.9e-179, P = 1.9e-179
 Identities = 322/407 (79%), Positives = 358/407 (87%)

Query:     1 MSLKSKGELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKL 60
             MS K KGE +SRS VS+KWT LLCLG FC GM FTNRMW +PESKG +  +  EAE+LKL
Sbjct:     1 MSAKIKGEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKL 60

Query:    61 VSEGCNPRL---KVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSG 117
             VSEGCNP+    K V+ D + +FGEV  TH A+QTLDKTIS+LEMELAAAR+ QES+ +G
Sbjct:    61 VSEGCNPKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNG 120

Query:   118 SPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGXXXXXXXXXXGIIMR 177
             +PLS+D+ K +   +RR+LMVVGINTAFSSRKRRDS+RATWM QG          GII+R
Sbjct:   121 APLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIR 180

Query:   178 FVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYV 237
             FVIGHSAT+GGILDRAIEAEDRKHGDF+RLDHVEGYLELS KTK YF+TA S+WDADFYV
Sbjct:   181 FVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYV 240

Query:   238 KVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYF 297
             KVDDDVHVNIATLG+TLVRHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GN+YF
Sbjct:   241 KVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYF 300

Query:   298 RHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDC 357
             RHATGQLYAIS+DLA+YISINQHVLHKYANEDVSLG+WFIG+DV+HIDDRRLCCGTPPDC
Sbjct:   301 RHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDC 360

Query:   358 EWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF 404
             EWKAQAGNICVASFDW+CSGICRSADRIKEVHRRCGEGE ALWSATF
Sbjct:   361 EWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LEJ9B3GT4_ARATH2, ., 4, ., 1, ., -0.75880.97270.9656nono
Q9ZV71B3GT3_ARATH2, ., 4, ., 1, ., -0.79701.00.9877nono
A8MRC7B3GT2_ARATH2, ., 4, ., 1, ., -0.81571.00.9926yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.79LOW CONFIDENCE prediction!
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query404
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 0.0
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 2e-63
pfam1333489 pfam13334, DUF4094, Domain of unknown function (DU 5e-40
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 8e-08
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  829 bits (2144), Expect = 0.0
 Identities = 365/408 (89%), Positives = 388/408 (95%), Gaps = 4/408 (0%)

Query: 1   MSLKSKGEL-TSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLK 59
           MS KS+GE  +SRSVVS+KWT LLCLGCFCAGMLFT+RMW +PESKG +RTT  EAE+LK
Sbjct: 1   MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLK 60

Query: 60  LVSEGCNPRL---KVVRHDSKDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILS 116
           LVSEGC+P+    K V+ DSKDI GEV KTHNAIQTLDKTISNLEMELAAARAAQESIL+
Sbjct: 61  LVSEGCDPKTLYQKEVKRDSKDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILN 120

Query: 117 GSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIM 176
           GSP+SEDLKKT+SSGKRRYLMVVGINTAFSSRKRRDSVRATWM QGEKRK+LEEEKGII+
Sbjct: 121 GSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIII 180

Query: 177 RFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFY 236
           RFVIGHSATSGGILDRAIEAEDRKHGDF+RLDHVEGYLELSAKTK YFATAV++WDADFY
Sbjct: 181 RFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY 240

Query: 237 VKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRY 296
           VKVDDDVHVNIATLG+TLVRHR KPRVYIGCMKSGPVL+QKGVRYHEPEYWKFGE GN+Y
Sbjct: 241 VKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKY 300

Query: 297 FRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPD 356
           FRHATGQLYAISKDLA+YISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPD
Sbjct: 301 FRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPD 360

Query: 357 CEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGENALWSATF 404
           CEWKAQAGNICVASFDW+CSGICRSADRIKEVHRRCGEGENALWSATF
Sbjct: 361 CEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSATF 408

Length = 408
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094) Back     alignment and domain information
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 404
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
PF1333495 DUF4094: Domain of unknown function (DUF4094) 99.95
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.77
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.61
PLN03153 537 hypothetical protein; Provisional 99.07
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.22
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 95.8
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 95.16
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 95.01
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 94.12
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 93.65
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 93.64
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 93.23
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 92.73
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 92.2
PRK11204 420 N-glycosyltransferase; Provisional 92.09
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 91.92
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 91.03
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 91.02
cd06423180 CESA_like CESA_like is the cellulose synthase supe 89.37
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 88.8
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 88.27
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 88.26
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 88.16
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 87.87
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 87.75
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 86.08
PRK14583 444 hmsR N-glycosyltransferase; Provisional 86.01
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 85.18
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 84.43
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 84.37
PF04646 255 DUF604: Protein of unknown function, DUF604; Inter 83.44
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 81.39
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 81.23
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 80.87
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-112  Score=855.57  Aligned_cols=404  Identities=90%  Similarity=1.439  Sum_probs=376.8

Q ss_pred             CCccccc-ccCCCCccchHHHHHHHHHHHHhHHHhcccCCCCccCccccchhhhhHhhhhhccCCCCCcc---ccccCCc
Q 015562            1 MSLKSKG-ELTSRSVVSQKWTFLLCLGCFCAGMLFTNRMWAVPESKGFTRTTAMEAEKLKLVSEGCNPRL---KVVRHDS   76 (404)
Q Consensus         1 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   76 (404)
                      ||.|+|| ++.+|+.||+||+++||++|||+|++||+|||..||..+..++++.++++++++++||++++   |..++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~   80 (408)
T PLN03193          1 MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLKLVSEGCDPKTLYQKEVKRDS   80 (408)
T ss_pred             CCcccccccccccccccHHHHHHHHHHHHHHHHhhccccccCCccccccccccchhhhhhhhccccccccccccccccch
Confidence            8999999 77899999999999999999999999999999999999988878888999999999999876   4446789


Q ss_pred             chhhhhhHhhHHHHHhhhhhHHHHHHHHHHHHhhhhcccCCCCCcccccccCCCCCCCeeEEEEEECCCCCHHHHHHHHH
Q 015562           77 KDIFGEVFKTHNAIQTLDKTISNLEMELAAARAAQESILSGSPLSEDLKKTESSGKRRYLMVVGINTAFSSRKRRDSVRA  156 (404)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~i~~le~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvI~V~S~~~~~~rR~aIRe  156 (404)
                      ++||++|++||+|||+|+|+|+.||||||+|++.|..+.++.|.++.....+...+++++|||+|+|+|+|++||++||+
T Consensus        81 ~~~~~~~~~t~~~~~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~  160 (408)
T PLN03193         81 KDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRA  160 (408)
T ss_pred             hHHHHHHhhHHHHHHHHhhhhhHHhHHHHHHHhhhhhhccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999977766776666533333344567789999999999999999999999


Q ss_pred             HHHhhhhhhhhccccCcEEEEEEeeccCCCCChhHHHHHHHHhhcCCeeecCCcccccchhHHHHHHHHHHHhcCCcceE
Q 015562          157 TWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFY  236 (404)
Q Consensus       157 TW~~~~~~l~~l~~~~~v~v~FviG~s~~~~~~~~~~L~~E~~~~~DiL~ld~~DsY~nLt~Ktl~~~~wa~~~~~a~f~  236 (404)
                      |||+.++.+.+++.+.+++++||||++.++++.++++|++|+++|+|||++||+|+|.|||+||+++|+||.++|+++||
T Consensus       161 TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~  240 (408)
T PLN03193        161 TWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY  240 (408)
T ss_pred             HHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEE
Confidence            99998877777777899999999999987677899999999999999999999999999999999999999999999999


Q ss_pred             EEeCCceEecHHHHHHHHHhcCCCCCeEEEEeccCcccccCCCccccCcccccCCCCCCCCCCCCCCceeeCHHHHHHHH
Q 015562          237 VKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYIS  316 (404)
Q Consensus       237 lKvDDDvfVn~~~L~~~L~~~~~~~~lYiG~~~~gpv~r~~~~Kwy~pe~~~f~d~~~~Yp~y~~G~gYvLS~dla~~I~  316 (404)
                      ||+|||+|||+++|+.+|..++.++++|+|||+++|++.+++.|||+|++|+||++++.|||||+|+|||||+|+|++|+
T Consensus       241 mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~  320 (408)
T PLN03193        241 VKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYIS  320 (408)
T ss_pred             EEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHH
Confidence            99999999999999999998877789999999999887778889999999999988999999999999999999999999


Q ss_pred             HhccccCCCCcchHHHHHHHhcCCCeeecCCCcccCCCCCcccccccCCccccccccccccccCcHHHHHHHHHHccCCc
Q 015562          317 INQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHRRCGEGE  396 (404)
Q Consensus       317 ~~~~~l~~~~~EDV~vG~~l~~L~v~~id~~~f~~~~~~~cewk~~~~~~c~~~~~~~~sgic~~~~~m~~vH~~~~~~~  396 (404)
                      .+...++.|++||||+|+||++|+|+|+|+++|||+++|+|+||+++|++|+++|||+|||||+|++||+++|++|+|++
T Consensus       321 ~n~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~~~~~~csg~c~~~~~~~~~h~~c~~~~  400 (408)
T PLN03193        321 INQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGE  400 (408)
T ss_pred             hChhhhcccCcchhhhhhHhccCCceeeecccccCCCCccccccccCCCeeEEEecccCcccCCHHHHHHHHHHhcCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccC
Q 015562          397 NALWSATF  404 (404)
Q Consensus       397 ~~~w~~~~  404 (404)
                      +|+|+++|
T Consensus       401 ~~~~~~~~  408 (408)
T PLN03193        401 NALWSATF  408 (408)
T ss_pred             ccceeecC
Confidence            99999987

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>PF13334 DUF4094: Domain of unknown function (DUF4094) Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query404
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 6e-05
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure
 Score = 43.6 bits (102), Expect = 6e-05
 Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 25/176 (14%)

Query: 138 VVGINTAFSS-RKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEA 196
            + + T ++  R R D +  TW               I  +  I   +      D  ++ 
Sbjct: 16  FIAVKTTWAFHRSRLDLLLDTW------------VSRIRQQTFIFTDSP-----DERLQE 58

Query: 197 EDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVR 256
               H    +      +  LS K    F     +    ++  VDDD +VN   L Q L  
Sbjct: 59  RLGPHLVVTQCSAEHSHPALSCKMAAEFDA-FLVSGLRWFCHVDDDNYVNPKALLQLLKT 117

Query: 257 HRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLA 312
                 VY+G       ++   ++  +           R++    G  + I++ LA
Sbjct: 118 FPQDRDVYVGKPSLNRPIHASELQSKQRTKL------VRFWFATGGAGFCINRQLA 167

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query404
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.91
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 93.61
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 92.06
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 91.66
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 90.8
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 90.07
3bcv_A240 Putative glycosyltransferase protein; protein stru 87.88
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 83.68
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=99.91  E-value=6.3e-24  Score=206.60  Aligned_cols=195  Identities=17%  Similarity=0.162  Sum_probs=132.3

Q ss_pred             CCeeEEEEEECCCC-CHHHHHHHHHHHHhhhhhhhhccccCcEEEEEEeeccCCCCChhHHHHHHHHhhcCCeeecCCc-
Q 015562          133 RRYLMVVGINTAFS-SRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHV-  210 (404)
Q Consensus       133 ~~~~lvI~V~S~~~-~~~rR~aIReTW~~~~~~l~~l~~~~~v~v~FviG~s~~~~~~~~~~L~~E~~~~~DiL~ld~~-  210 (404)
                      ..-.|+|+|+|+++ +..|+++||+||++....        .   .||.+..+  +.    .+...  ..++++..++. 
T Consensus        11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~--------~---~fifsd~~--d~----~l~~~--~~~~~~~~~~~~   71 (280)
T 2j0a_A           11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ--------Q---TFIFTDSP--DE----RLQER--LGPHLVVTQCSA   71 (280)
T ss_dssp             CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG--------G---EEEEESSC--CH----HHHHH--HGGGEEECCC--
T ss_pred             CcccEEEEEECcHHHHHHHHHHHHHHHhccCCC--------c---eEEEcCCC--cc----ccccc--ccccceeccccc
Confidence            34678899999998 557889999999987521        1   24333322  22    23222  24568777764 


Q ss_pred             -ccccchhHHHHHHHHHHHhcCCcceEEEeCCceEecHHHHHHHHHhcCCCCCeEEEEeccCcccccCCCccccCccccc
Q 015562          211 -EGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKF  289 (404)
Q Consensus       211 -DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVn~~~L~~~L~~~~~~~~lYiG~~~~gpv~r~~~~Kwy~pe~~~f  289 (404)
                       +++.+++.|+...+++.. +.+++|++|+|||+|||+++|+++|..+++..++|+|......+++   .+++.|...+ 
T Consensus        72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~~-  146 (280)
T 2j0a_A           72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQRT-  146 (280)
T ss_dssp             -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred             cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCccccc-
Confidence             467889999999998765 3599999999999999999999999999888899999865333332   1344443222 


Q ss_pred             CCCCCCCCCCC-CCCceeeCHHHHHHHHHhcccc-------CCCCcchHHHHHHHh-cCCCeeecCCCcccCCC
Q 015562          290 GEAGNRYFRHA-TGQLYAISKDLAAYISINQHVL-------HKYANEDVSLGSWFI-GLDVEHIDDRRLCCGTP  354 (404)
Q Consensus       290 ~d~~~~Yp~y~-~G~gYvLS~dla~~I~~~~~~l-------~~~~~EDV~vG~~l~-~L~v~~id~~~f~~~~~  354 (404)
                        +...| +|| +|+||+||+++++.|+......       .....||+++|.|+. .+||..++.+.|+...+
T Consensus       147 --~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~  217 (280)
T 2j0a_A          147 --KLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE  217 (280)
T ss_dssp             ------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred             --ccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence              12245 466 6789999999999999754322       122468999999998 99999999999987543
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query404
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 91.04
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.04  E-value=2  Score=38.19  Aligned_cols=159  Identities=14%  Similarity=0.120  Sum_probs=81.7

Q ss_pred             EEEEEeeccCCCCChhHHHHHHHHhhcCCeee-cCCcccccchhHHHHHHHHHHHhcCCcceEEEeCCceEecHHHHHHH
Q 015562          175 IMRFVIGHSATSGGILDRAIEAEDRKHGDFMR-LDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQT  253 (404)
Q Consensus       175 ~v~FviG~s~~~~~~~~~~L~~E~~~~~DiL~-ld~~DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVn~~~L~~~  253 (404)
                      .|+.|=..|.  ++.....+++-.+.+.+-+. +...++. ..+    .+.+.+.+....+|++.+|+|+.+.++.|..+
T Consensus        56 EIIvVDdgS~--d~~~~~~l~~~~~~~~~~i~vi~~~~n~-G~~----~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l  128 (328)
T d1xhba2          56 EIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRS-GLI----RARLKGAAVSRGQVITFLDAHCECTAGWLEPL  128 (328)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCC-CHH----HHHHHHHHHCCSSEEEEEESSEEECTTCHHHH
T ss_pred             EEEEEECCCC--hhhHHHHHHHHHHhcCCCeEEEEecccc-cch----HHHHHHHHhhhcceeeecCcccccChhHHHHH
Confidence            4555543332  34444445444455555333 3322221 222    35566666668999999999999999887776


Q ss_pred             HHhcCCCCCeEE-EEec--cC---------ccccc-----CCCccc-cCcc---cccCC-CCCCCCCCCCCCceeeCHHH
Q 015562          254 LVRHRSKPRVYI-GCMK--SG---------PVLNQ-----KGVRYH-EPEY---WKFGE-AGNRYFRHATGQLYAISKDL  311 (404)
Q Consensus       254 L~~~~~~~~lYi-G~~~--~g---------pv~r~-----~~~Kwy-~pe~---~~f~d-~~~~Yp~y~~G~gYvLS~dl  311 (404)
                      +......+...+ |.+.  .+         +..+.     ....|+ .|..   ....+ .....-+++.|+++++++++
T Consensus       129 ~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  208 (328)
T d1xhba2         129 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY  208 (328)
T ss_dssp             HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred             HHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHH
Confidence            654432222222 2211  10         11000     001111 1110   00000 01122346789999999999


Q ss_pred             HHHHHHhccccCCCCcchHHHHHHHhcCC
Q 015562          312 AAYISINQHVLHKYANEDVSLGSWFIGLD  340 (404)
Q Consensus       312 a~~I~~~~~~l~~~~~EDV~vG~~l~~L~  340 (404)
                      ...+---...+..+..||+-++.-+...|
T Consensus       209 f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G  237 (328)
T d1xhba2         209 FQEIGTYDAGMDIWGGENLEISFRIWQCG  237 (328)
T ss_dssp             HHHTTSCCTTSCTTCCCCSHHHHHHHHTT
T ss_pred             HHHhCCCCCCCcCcCchHHHHHHHHHHhC
Confidence            99875544445455579988776664443