Citrus Sinensis ID: 015570
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 404 | 2.2.26 [Sep-21-2011] | |||||||
| Q8H0U5 | 641 | Protein TIC 62, chloropla | yes | no | 0.967 | 0.609 | 0.561 | 1e-114 | |
| Q8SKU2 | 534 | Protein TIC 62, chloropla | N/A | no | 0.950 | 0.719 | 0.600 | 1e-111 | |
| Q8H124 | 280 | Uncharacterized protein A | no | no | 0.440 | 0.635 | 0.365 | 5e-17 | |
| Q94EG6 | 253 | Uncharacterized protein A | no | no | 0.339 | 0.541 | 0.310 | 3e-10 | |
| O80934 | 325 | Uncharacterized protein A | no | no | 0.242 | 0.301 | 0.358 | 4e-10 |
| >sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/433 (56%), Positives = 291/433 (67%), Gaps = 42/433 (9%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITGPYR
Sbjct: 128 MKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITGPYR 185
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI SG
Sbjct: 186 IDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALIESG 245
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
L Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+ K+
Sbjct: 246 LNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKI 305
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAE---PKESIAPEKSDPAASKSMISEESSAPITEE 237
VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K + E ++ E
Sbjct: 306 VEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKEDEA 365
Query: 238 PVQTKAKVTDPLSPYTSYEDLKPPTSPTPT-------APSGKKDSTIVDGLPM-SGISDA 289
P + K PLSPY SYEDLKPPTSP P A S + D+T V P+ + +
Sbjct: 366 PPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQV---PVEANVVPV 422
Query: 290 QTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPS---------------SPSPT 334
STS V + V E K RPLSPY YE+LKPPS SP PT
Sbjct: 423 PDSTSNVPVVEVKQV----EEKKERPLSPYARYENLKPPSSPSPTASSTRKSDSLSPGPT 478
Query: 335 PSGPKEVLSSSSTTGE--VASQLTGGNDVAKTPDTSLVEK-----NPIVNSIHHHSPYHM 387
S + + + T E VA+ +T + P+T++ P + + SPY +
Sbjct: 479 DSDTDKSSTVAKTVTETAVATSVTETSVATSVPETAVATSVTETAAPATSKMRPLSPYAI 538
Query: 388 YEDLKPPTSPIPS 400
Y DLKPPTSP P+
Sbjct: 539 YADLKPPTSPTPA 551
|
Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 251/418 (60%), Positives = 290/418 (69%), Gaps = 34/418 (8%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
+KLDG A+ G + VE LE+VECDLEK QI ALGNAS VIC IGASEKE+FDITGP R
Sbjct: 135 LKLDG--ASGGGEAVEKLEIVECDLEKADQIGSALGNASTVICAIGASEKEIFDITGPCR 192
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID++ATKNLVDAAT+AKVNHFI+V+SLGTNKFG PAAILNLFWGVL+WKRKAEEAL+ASG
Sbjct: 193 IDYRATKNLVDAATVAKVNHFILVTSLGTNKFGLPAAILNLFWGVLIWKRKAEEALLASG 252
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
+PYTIVRPGGMERPTDAYKETHN+TLS EDTLFGGQVSNLQVAEL+A MAKN LSYCK+
Sbjct: 253 IPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQVAELMAIMAKNPDLSYCKI 312
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAA------SKSMISEE-SSAP 233
VEVIAETTAPLTP E+LL +IPSQR +K+D A S ++++E S AP
Sbjct: 313 VEVIAETTAPLTPAEKLLTRIPSQRPYIPSPKKVQKADTATVSNTGPSANVVAEVPSIAP 372
Query: 234 ITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTST 293
E + AK PLSPYT+Y+DLKPP+SP+PT PS KK I D +P SD +S
Sbjct: 373 QKETASKPVAKTEQPLSPYTAYDDLKPPSSPSPTKPSEKKQINISDAVPTPISSDTPSSI 432
Query: 294 SGVKTGITETVSAPEELSKAR-PLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVA 352
+ GI++T S+ SK + LSPY AY DLK SP+PS P LS T V
Sbjct: 433 QEID-GISQTTSS----SKGKESLSPYAAYPDLK--PPSSPSPSVPTTSLSKRDTV--VV 483
Query: 353 SQLTGGNDVAKTPDTSLVEKNPIVNSIHHH-------SPYHMYEDLKPPTSPIPSPKK 403
S + P VE P H H SPY MYEDLKPP SP PS +K
Sbjct: 484 S--------SNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYAMYEDLKPPASPSPSFRK 533
|
Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids. Pisum sativum (taxid: 3888) |
| >sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 19/197 (9%)
Query: 18 LELVECDL-EKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI 75
L++V D+ E ++ +G+ S VIC G + FDI P+++D T NLVDA
Sbjct: 93 LQIVRADVTEGPDKLAEVIGDDSQAVICATGF--RPGFDIFTPWKVDNFGTVNLVDACRK 150
Query: 76 AKVNHFIMVSSLGTNKFGF-----PAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPG 129
V F++VSS+ N PA + LNLF L+ K +AE+ + SG+ YTIVRPG
Sbjct: 151 QGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPG 210
Query: 130 GMER--PTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187
G++ P T N+ + EDTL+ G +S VAE +A A + S KVVE++A
Sbjct: 211 GLKNDPP------TGNVVMEPEDTLYEGSISRDLVAE-VAVEALLQEESSFKVVEIVARA 263
Query: 188 TAPLTPMEELLAKIPSQ 204
AP ++L A + Q
Sbjct: 264 EAPKRSYKDLFASVKGQ 280
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 PYRIDFQATKNLVDAATIAKVNHFIMVSSLG-TNKFGFPAAILNLFWG--VLLWKRKAEE 114
P ++D+ KN +DAA +A V H ++V S+G TN P LN +L+WKRKAE+
Sbjct: 105 PEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTN----PDHPLNKLGNGNILVWKRKAEQ 160
Query: 115 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG--------GQVSNLQVAELL 166
L SG PYTI+R GG+ +E + + ++D L V+ + + LL
Sbjct: 161 YLADSGTPYTIIRAGGLLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALL 217
Query: 167 ACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204
AKN++ E T+ P + L +++ S+
Sbjct: 218 FEEAKNKAFDLGSKPE---GTSTPTKDFKALFSQVTSR 252
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 51 EVFDITGPY--RIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLL 107
E F G Y ++D+ KN +DAA A V ++V S+G P +I N +L+
Sbjct: 168 EFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSIGNA--NILV 225
Query: 108 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 153
WKRKAE+ L SG+PYTI+R GG++ +E + + ++D L
Sbjct: 226 WKRKAEQYLADSGIPYTIIRAGGLQDKDGGIRE---LLVGKDDELL 268
|
Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 404 | ||||||
| 255556137 | 584 | NAD dependent epimerase/dehydratase, put | 0.975 | 0.674 | 0.664 | 1e-134 | |
| 224103467 | 564 | predicted protein [Populus trichocarpa] | 0.972 | 0.696 | 0.591 | 1e-131 | |
| 224080277 | 517 | predicted protein [Populus trichocarpa] | 0.935 | 0.731 | 0.628 | 1e-126 | |
| 225428568 | 529 | PREDICTED: protein TIC 62, chloroplastic | 0.957 | 0.731 | 0.632 | 1e-118 | |
| 157849706 | 624 | catalytic/coenzyme binding protein [Bras | 0.960 | 0.621 | 0.572 | 1e-118 | |
| 356545313 | 528 | PREDICTED: uncharacterized protein LOC10 | 0.965 | 0.738 | 0.613 | 1e-116 | |
| 356541105 | 529 | PREDICTED: uncharacterized protein LOC10 | 0.962 | 0.735 | 0.595 | 1e-114 | |
| 297830550 | 668 | catalytic/ coenzyme binding protein [Ara | 0.985 | 0.595 | 0.541 | 1e-114 | |
| 359475261 | 448 | PREDICTED: protein TIC 62, chloroplastic | 0.923 | 0.832 | 0.62 | 1e-113 | |
| 30685117 | 641 | Rossmann-fold NAD(P)-binding domain-cont | 0.967 | 0.609 | 0.561 | 1e-112 |
| >gi|255556137|ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223541766|gb|EEF43314.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/402 (66%), Positives = 309/402 (76%), Gaps = 8/402 (1%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKLDGE G QP+E E++ECDL+K +I ALGNAS+VICCIGA EKEVFD TGPYR
Sbjct: 127 MKLDGE----GAQPIEKFEIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFDFTGPYR 182
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+QAT+NL+DAAT+AKV HFIMVSSLGTNK GFPAAILNLFWGVL WKRKAEEALIASG
Sbjct: 183 IDYQATRNLIDAATVAKVKHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEEALIASG 242
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
+PYTIVRPGGMERPTDAYKETHNITLS+EDTLFGGQVSNLQVAEL+A MAKN LSYCKV
Sbjct: 243 IPYTIVRPGGMERPTDAYKETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLDLSYCKV 302
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISE--ESSAPITEEP 238
VEVIAETTAPLT M++LL +IPSQR +PKE A E +PA S ++ E E ++ I +EP
Sbjct: 303 VEVIAETTAPLTTMDKLLTRIPSQRIKPKEPAAAEGPEPAPSTKVVPEASEPTSAIEKEP 362
Query: 239 VQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPS-GKKDSTIVDGLPMSGISDAQTSTSGVK 297
Q KA V+ PLSPYT+Y+DLKPPTSP P PS G + S+ VD + DAQTS+SG+
Sbjct: 363 EQPKATVSRPLSPYTAYDDLKPPTSPIPIRPSGGNQSSSPVDAVAKPDTIDAQTSSSGLA 422
Query: 298 TGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLTG 357
+ I E+ A E A PLSPY AY DLKPP+SPSP PSG KE+ S +S+T +V S TG
Sbjct: 423 SAIPESKPATVEAKIAGPLSPYAAYPDLKPPTSPSPKPSGSKEIPSGASSTEKVESSATG 482
Query: 358 GNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIP 399
NDVA + E NP HSP+ +Y+DLKPPTSP P
Sbjct: 483 DNDVATITANNDAE-NPPPEFSSGHSPFLVYDDLKPPTSPSP 523
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103467|ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 269/455 (59%), Positives = 307/455 (67%), Gaps = 62/455 (13%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKLD E G QPVE LE VECDLEK QI PALGNASVV+CCIGASEKEVFD+TGP R
Sbjct: 118 MKLDVE----GSQPVERLETVECDLEKPNQIGPALGNASVVLCCIGASEKEVFDVTGPCR 173
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID++ATKNLVDAAT+AKV+HFIMVSSLGTNKFGFPAAILNLFWGVL+WKRKAEEALIASG
Sbjct: 174 IDYRATKNLVDAATVAKVDHFIMVSSLGTNKFGFPAAILNLFWGVLIWKRKAEEALIASG 233
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
+PYTIVRPGGMERPTDAYKETHN+T+S+EDTLFGGQVSNLQVAE +A MAKNR LSYCKV
Sbjct: 234 VPYTIVRPGGMERPTDAYKETHNLTVSEEDTLFGGQVSNLQVAEFMAFMAKNRGLSYCKV 293
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQ 240
VEVIAETTAPLTPM+ELLAKIPSQR EPK+S A E K + E S P EP Q
Sbjct: 294 VEVIAETTAPLTPMDELLAKIPSQRVEPKKSDAAELPKSVPPKIVEPEAPSPPSQREPAQ 353
Query: 241 TKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTGI 300
KA VT PLSPYT+YEDLKPPTSP PT PSGKK++ V+ + + D + +GI
Sbjct: 354 AKAVVTRPLSPYTAYEDLKPPTSPIPTQPSGKKEN--VNSVEAVSMLDTPDPSPASASGI 411
Query: 301 TETVSAPEELSKARPLSPYFAYEDLK----------------------------PPSS-- 330
ET AP E ARPLSPY AY+DLK PP++
Sbjct: 412 AETKPAPVETKTARPLSPYVAYDDLKPPTSPSPTAPVGLVAITAPAVPKTGNSAPPTAAI 471
Query: 331 -------PSPTPSGPKEVLSS---------SSTTGEVASQLTGGNDVAKTPDTSLVEKNP 374
P+P P P + ++ G VA+ + N V+KT + +
Sbjct: 472 DNQHHEEPNPRPLSPYPIYDDLKPPTSPSPTAPVGLVATT-SSINAVSKTGNNA--PPTA 528
Query: 375 IVNSIHHH-------SPYHMYEDLKPPTSPIPSPK 402
+++ HH SPY MYEDLKPP SP PS K
Sbjct: 529 AIDNQHHKEPNPRPLSPYPMYEDLKPPASPTPSLK 563
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224080277|ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 260/414 (62%), Positives = 292/414 (70%), Gaps = 36/414 (8%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKLD E G QPVE L++VECDLEK QI PALGNASV++CCIGA EKEVFD+TGPYR
Sbjct: 127 MKLDVE----GSQPVERLDIVECDLEKPNQIGPALGNASVLLCCIGAGEKEVFDVTGPYR 182
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+ ATKNLVDAAT KVNHFIMVSSLGTNK GFPAAILNLFWGVL+WKRKAEEALIASG
Sbjct: 183 IDYLATKNLVDAATATKVNHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRKAEEALIASG 242
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
+PYTIVRPGGMERPTDAYKETHNITLS+EDTLFGG VSNLQVAEL+A MA NR LSYCKV
Sbjct: 243 VPYTIVRPGGMERPTDAYKETHNITLSEEDTLFGGLVSNLQVAELMAFMANNRRLSYCKV 302
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQ 240
VEVIAETTAPLTPM+ELLAKIPSQR EPKE A + P K + + S+P +EP Q
Sbjct: 303 VEVIAETTAPLTPMDELLAKIPSQRVEPKEPEAADVPKPVPPKVVEPKAPSSPSQKEPAQ 362
Query: 241 TKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTS--GVKT 298
KA VT PLSPYT+Y+DLKPPTSPTP PS KK+S P+ +S T +
Sbjct: 363 AKAMVTRPLSPYTAYDDLKPPTSPTPIQPSSKKES----AGPLEAVSKPATQDTPPMPAP 418
Query: 299 GITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLTGG 358
G+ ET P E RPLSPY AY DLK P + + V+ +SST
Sbjct: 419 GVAETKPGPVETKTTRPLSPYAAYADLK-PPTSPSPTAPVGSVIPTSST----------- 466
Query: 359 NDVAKTPDTSLVEKNPIVNSI--HHH--------SPYHMYEDLKPPTSPIPSPK 402
N V +T + + P+ +I HH SPY MYEDLKPP SP PS K
Sbjct: 467 NAVPETGNRA----PPMAAAIDKQHHTEPKQKPLSPYPMYEDLKPPASPTPSLK 516
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225428568|ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera] gi|297741413|emb|CBI32544.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 262/414 (63%), Positives = 295/414 (71%), Gaps = 27/414 (6%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKLD E A++G QPVE LE+VECDLEKR QI PALGNASVVICCIGASEKEVFDITGPYR
Sbjct: 127 MKLDVESASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFDITGPYR 186
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+ ATKNL+DAAT+AKVNHFI+++SLGTNK GFPAAILNLFWGVL+WKRKAEEAL ASG
Sbjct: 187 IDYMATKNLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEEALFASG 246
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL+A MAKNR SYCKV
Sbjct: 247 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRGSSYCKV 306
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPA----ASKSMISEESSAPITE 236
VEVIAETTAPLTP ELLAKIPSQR + ++P++SD A + S PI +
Sbjct: 307 VEVIAETTAPLTPFGELLAKIPSQRVD----VSPKESDAADGPAPVPVVSGPPPSTPIEK 362
Query: 237 EPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTI--VDGLPMSGISDAQT--- 291
P Q KA PLSPY YEDLKPPTSPTPT + + VDG+P S
Sbjct: 363 GPPQGKATAMSPLSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSIPSVLEP 422
Query: 292 -STSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGE 350
ST K I EE K RPLSPY Y+DLKPP+SPSP+ V S+ E
Sbjct: 423 LSTVLAKEAIQ------EEAKKTRPLSPYIVYDDLKPPTSPSPSAP---TVSLPSTLPME 473
Query: 351 VASQL--TGGNDVAKTP--DTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 400
S++ GN+ A+ P D E++ + SP+ MYEDLKPPTSP PS
Sbjct: 474 GGSKIDNISGNNTAQPPAADIPKDEQHHVQAKPRPLSPFTMYEDLKPPTSPSPS 527
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157849706|gb|ABV89636.1| catalytic/coenzyme binding protein [Brassica rapa] | Back alignment and taxonomy information |
|---|
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/433 (57%), Positives = 294/433 (67%), Gaps = 45/433 (10%)
Query: 9 NKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKN 68
++G QPVE LE+VECDLEK+ I+PALGNASVVICCIGASEKE+ DITGPYRID+ ATKN
Sbjct: 133 DEGTQPVEKLEVVECDLEKKDSIQPALGNASVVICCIGASEKEISDITGPYRIDYLATKN 192
Query: 69 LVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRP 128
LVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALIASGL Y IVRP
Sbjct: 193 LVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALIASGLNYAIVRP 252
Query: 129 GGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188
GGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS K+VEV+AETT
Sbjct: 253 GGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSCSKIVEVVAETT 312
Query: 189 APLTPMEELLAKIPSQR---AEPKES-----IAPEKSDPAASKSMISEES----SAPITE 236
APLTP+E+LL KIPS+R PKES + P ++P +S+ ++E + P+T+
Sbjct: 313 APLTPIEKLLKKIPSKRPYVPPPKESVPAKEVTPVPAEPVKQESVAAKEVTPVLTEPVTK 372
Query: 237 EPVQTK-----AKVTD----PLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGIS 287
EP K A+V D PLSPY +YEDLKPPTSP P G + VD P+ +
Sbjct: 373 EPTAPKEDKAPAEVKDVKPRPLSPYAAYEDLKPPTSPIPATALGATKAKEVDATPVPEVE 432
Query: 288 DAQTSTSGVKTGITETVSAPEELS-------------KARPLSPYFAYEDLKPPSSPSPT 334
+ Q + V+ +P E S K RPLSPY +YE+LKPPSSP+P
Sbjct: 433 ETQ---APVEANAVPPPESPVETSVPVVEEVKQVEEKKERPLSPYASYENLKPPSSPTPK 489
Query: 335 PSGPKEVLSSSSTTGEVASQL-TGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKP 393
SG + S T V + TG + T T E P + + SPY Y DLKP
Sbjct: 490 ASG----IQKSDTLAPVPTDSDTGESSTVATTVTEEAEAPPAIPKMRPLSPYAAYADLKP 545
Query: 394 PTSPIPS---PKK 403
PTSP P+ PKK
Sbjct: 546 PTSPTPASTGPKK 558
|
Source: Brassica rapa Species: Brassica rapa Genus: Brassica Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356545313|ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779056 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 249/406 (61%), Positives = 291/406 (71%), Gaps = 16/406 (3%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
+KLDG A+ G Q VE LE+VECDLEK I ALG+AS VIC IGASEKEVFDITGP+R
Sbjct: 129 LKLDG--ASGGGQAVEKLEIVECDLEKPETIGSALGDASTVICSIGASEKEVFDITGPFR 186
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+QATKNL+DAAT+AKVNHFI+V+SLGTNK GFPAAILNLFWGVL+WKRKAEEAL+ASG
Sbjct: 187 IDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALLASG 246
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
LPYTIVRPGGMERPTDA+KETHNITLS EDTLFGG VSNLQ+AELLA MAKNR LSYCK+
Sbjct: 247 LPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNRDLSYCKI 306
Query: 181 VEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPITEE 237
VE IAETTAPLTPMEELLAKIPSQR + PK+ S P ++++ E +E
Sbjct: 307 VEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVVTVEPKVATQQE 366
Query: 238 PVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVK 297
Q K PLSPY Y+DLKPP+SP+P+ P G K + I + +P SD +S GV
Sbjct: 367 TAQPKPVAKQPLSPYIVYDDLKPPSSPSPSQPGGGKPTKISETVPKPSASDTPSSVPGVD 426
Query: 298 TGITETVSAPEELSKA-RPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTG--EVASQ 354
GI++T S+ SK +PLSPY AY DLKPP+SPS P+ P +S+ + G E+ +
Sbjct: 427 -GISQTTSS----SKVEKPLSPYVAYPDLKPPTSPS--PNAPTVSVSTPAAAGVPEIDTI 479
Query: 355 LTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 400
+ G D E P S SPY MYEDLKPP SP PS
Sbjct: 480 SSNGPAQLSAADEPKEEHLPEPKS-RPLSPYTMYEDLKPPASPSPS 524
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541105|ref|XP_003539023.1| PREDICTED: uncharacterized protein LOC100802919 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/410 (59%), Positives = 288/410 (70%), Gaps = 21/410 (5%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
+KLDG AN G+Q VE LE+VECDLEK I ALGNAS VIC IGASEKEVFDITGP+R
Sbjct: 127 LKLDG--ANGGVQAVEKLEIVECDLEKPETIGSALGNASTVICSIGASEKEVFDITGPFR 184
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+ ATKNL+DAAT+ KVNHFI+V+SLGTNK GFPAAILNLFWGVL+WKRKAEEAL+ASG
Sbjct: 185 IDYLATKNLIDAATVTKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALLASG 244
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
LPYTIVRPGGMERPTDA+KETHNITLS EDTLFGG VSNLQ+AELLA MAKNR LSYCK+
Sbjct: 245 LPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNRDLSYCKI 304
Query: 181 VEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKS-----DPAASKSMISEESSA 232
VE IAETT+PLTPME LLA+IPSQR + PK P+ + DP A +++++E
Sbjct: 305 VEAIAETTSPLTPMEGLLARIPSQRPYISSPKVIQKPDIAVVSIPDPPA--NVVAKEPKV 362
Query: 233 PITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTS 292
+E Q K PLSPY Y+DLKPP+SP+P+ P G K + I + +P SD +S
Sbjct: 363 ATQQETAQPKPVANQPLSPYIVYDDLKPPSSPSPSQPGGGKQTKISETVPQPSASDTPSS 422
Query: 293 TSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTG--E 350
GV T S+ E +PLSPY Y DLKPP+SPS P+ P +S+ + G +
Sbjct: 423 VLGVDGDSQTTSSSKVE----KPLSPYVVYPDLKPPTSPS--PNAPTVSVSTPAAAGVPK 476
Query: 351 VASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 400
+ + + G T D E P S SPY MYEDLKPP SP PS
Sbjct: 477 IDTISSNGPAQLSTADEPKKEHLPEPKST-PLSPYTMYEDLKPPASPSPS 525
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297830550|ref|XP_002883157.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297328997|gb|EFH59416.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 242/447 (54%), Positives = 288/447 (64%), Gaps = 49/447 (10%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITGPYR
Sbjct: 128 MKLQN--TDEGAQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITGPYR 185
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFG PAAILNLFWGVL WKRKAEEALIASG
Sbjct: 186 IDYLATKNLVDAATSAKVNNFILVTSLGTNKFGLPAAILNLFWGVLCWKRKAEEALIASG 245
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
L Y IVRPGGMERPTDAYKETHN+TLS +DTLFGGQVSNLQVAELLACMAKN LS+ K+
Sbjct: 246 LNYAIVRPGGMERPTDAYKETHNLTLSLDDTLFGGQVSNLQVAELLACMAKNPQLSFSKI 305
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAE---PKESIAPEKSDPAASKSMISEESSAPITEE 237
VEV+AETTAPLT +E+LL KIPS+R PK S+A ++ P +K + E ++ E
Sbjct: 306 VEVVAETTAPLTSIEKLLEKIPSKRPYVPPPKASVAAKEVKPVPTKPVTQEPTAPKEDEA 365
Query: 238 PVQTKAKVTDPLSPYTSYEDLKPPTSPTPTA-----PSGKKDSTIVDGLPMSGISDAQTS 292
P + K PLSPY +YEDLKPPTSP P++ P+ K+ L + + S
Sbjct: 366 PPKEKDVKPRPLSPYAAYEDLKPPTSPIPSSTTSVGPAKSKEVDATQVLVEANVVPVPDS 425
Query: 293 TSGVKTGITETVSAPE--------ELSKARPLSPYFAYEDLKPPSSPSPTPSGPKE---- 340
TS V E V E K RPLSPY YEDLKPPS PSPT SG K+
Sbjct: 426 TSNVPVVEEEEVKQAVEEVEVMQAEEKKERPLSPYARYEDLKPPSLPSPTASGTKKNDSL 485
Query: 341 ----------------------VLSSSSTTGEVASQLTGGNDVAKTPDTSLVEK-----N 373
+ +S+T V + +T + P+T+
Sbjct: 486 SPGPTDSDTDKSSTVATSVTETAVETSATETAVETSVTETAVETRVPETAAASSFTETAA 545
Query: 374 PIVNSIHHHSPYHMYEDLKPPTSPIPS 400
P + SPY +Y DLKPPTSP P+
Sbjct: 546 PATPRMRPLSPYAVYADLKPPTSPTPA 572
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475261|ref|XP_003631626.1| PREDICTED: protein TIC 62, chloroplastic isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/400 (62%), Positives = 278/400 (69%), Gaps = 27/400 (6%)
Query: 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 74
VE LE+VECDLEKR QI PALGNASVVICCIGASEKEVFDITGPYRID+ ATKNL+DAAT
Sbjct: 60 VEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFDITGPYRIDYMATKNLIDAAT 119
Query: 75 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERP 134
+AKVNHFI+++SLGTNK GFPAAILNLFWGVL+WKRKAEEAL ASGLPYTIVRPGGMERP
Sbjct: 120 VAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEEALFASGLPYTIVRPGGMERP 179
Query: 135 TDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPM 194
TDAYKETHNITLSQEDTLFGGQVSNLQVAEL+A MAKNR SYCKVVEVIAETTAPLTP
Sbjct: 180 TDAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRGSSYCKVVEVIAETTAPLTPF 239
Query: 195 EELLAKIPSQRAEPKESIAPEKSDPA----ASKSMISEESSAPITEEPVQTKAKVTDPLS 250
ELLAKIPSQR + ++P++SD A + S PI + P Q KA PLS
Sbjct: 240 GELLAKIPSQRVD----VSPKESDAADGPAPVPVVSGPPPSTPIEKGPPQGKATAMSPLS 295
Query: 251 PYTSYEDLKPPTSPTPTAPSGKKDSTI--VDGLPMSGISDAQT----STSGVKTGITETV 304
PY YEDLKPPTSPTPT + + VDG+P S ST K I
Sbjct: 296 PYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKEAIQ--- 352
Query: 305 SAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQL--TGGNDVA 362
EE K RPLSPY Y+DLK P+ V S+ E S++ GN+ A
Sbjct: 353 ---EEAKKTRPLSPYIVYDDLK---PPTSPSPSAPTVSLPSTLPMEGGSKIDNISGNNTA 406
Query: 363 KTP--DTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 400
+ P D E++ + SP+ MYEDLKPPTSP PS
Sbjct: 407 QPPAADIPKDEQHHVQAKPRPLSPFTMYEDLKPPTSPSPS 446
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30685117|ref|NP_188519.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|75151827|sp|Q8H0U5.1|TIC62_ARATH RecName: Full=Protein TIC 62, chloroplastic; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 62; Short=AtTIC62; Flags: Precursor gi|25083201|gb|AAN72050.1| Unknown protein [Arabidopsis thaliana] gi|30725480|gb|AAP37762.1| At3g18890 [Arabidopsis thaliana] gi|332642643|gb|AEE76164.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/433 (56%), Positives = 291/433 (67%), Gaps = 42/433 (9%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITGPYR
Sbjct: 128 MKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITGPYR 185
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI SG
Sbjct: 186 IDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALIESG 245
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
L Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+ K+
Sbjct: 246 LNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKI 305
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAE---PKESIAPEKSDPAASKSMISEESSAPITEE 237
VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K + E ++ E
Sbjct: 306 VEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKEDEA 365
Query: 238 PVQTKAKVTDPLSPYTSYEDLKPPTSPTPT-------APSGKKDSTIVDGLPM-SGISDA 289
P + K PLSPY SYEDLKPPTSP P A S + D+T V P+ + +
Sbjct: 366 PPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQV---PVEANVVPV 422
Query: 290 QTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPS---------------SPSPT 334
STS V + V E K RPLSPY YE+LKPPS SP PT
Sbjct: 423 PDSTSNVPVVEVKQV----EEKKERPLSPYARYENLKPPSSPSPTASSTRKSDSLSPGPT 478
Query: 335 PSGPKEVLSSSSTTGE--VASQLTGGNDVAKTPDTSLVEK-----NPIVNSIHHHSPYHM 387
S + + + T E VA+ +T + P+T++ P + + SPY +
Sbjct: 479 DSDTDKSSTVAKTVTETAVATSVTETSVATSVPETAVATSVTETAAPATSKMRPLSPYAI 538
Query: 388 YEDLKPPTSPIPS 400
Y DLKPPTSP P+
Sbjct: 539 YADLKPPTSPTPA 551
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 404 | ||||||
| TAIR|locus:2087901 | 641 | Tic62 "translocon at the inner | 0.915 | 0.577 | 0.567 | 1.8e-101 | |
| TAIR|locus:2040854 | 280 | AT2G34460 [Arabidopsis thalian | 0.480 | 0.692 | 0.354 | 4.7e-20 | |
| TAIR|locus:2185228 | 253 | AT5G02240 [Arabidopsis thalian | 0.353 | 0.565 | 0.315 | 7.4e-10 | |
| TAIR|locus:2040716 | 325 | AT2G37660 [Arabidopsis thalian | 0.339 | 0.421 | 0.289 | 2.4e-09 | |
| TAIR|locus:2102842 | 510 | PTAC16 "plastid transcriptiona | 0.725 | 0.574 | 0.240 | 1.4e-07 |
| TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 982 (350.7 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 220/388 (56%), Positives = 263/388 (67%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITGPYR
Sbjct: 128 MKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITGPYR 185
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI SG
Sbjct: 186 IDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALIESG 245
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
L Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+ K+
Sbjct: 246 LNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKI 305
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRA---EPKESIAPEKSDPAASKSMISEESSAPITEE 237
VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K +++E +AP +E
Sbjct: 306 VEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKP-VTQEPTAPKEDE 364
Query: 238 -PVQTKAKVTDPLSPYTSYEDLK--XXXXXXXXXXXGKKDSTIVDG--LPM-SGISDAQT 291
P + K PLSPY SYEDLK S VD +P+ + +
Sbjct: 365 APPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPVPD 424
Query: 292 STSGVKTGITETVSAPEELSKARPLSPYFAYEDLKXXXXXXXXXXXXKEVLSSSSTTGEV 351
STS V + E V EE K RPLSPY YE+LK ++ S S + G
Sbjct: 425 STSNVP--VVE-VKQVEE-KKERPLSPYARYENLKPPSSPSPTASSTRK--SDSLSPGPT 478
Query: 352 ASQLTGGNDVAKTPDTSLVEKNPIVNSI 379
S + VAKT + V + S+
Sbjct: 479 DSDTDKSSTVAKTVTETAVATSVTETSV 506
|
|
| TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 239 (89.2 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 74/209 (35%), Positives = 108/209 (51%)
Query: 4 DGELANKGIQPVEMLELVECDL-EKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRI 61
D E A + L++V D+ E ++ +G+ S VIC G + FDI P+++
Sbjct: 79 DVEKAKTSFKDDPSLQIVRADVTEGPDKLAEVIGDDSQAVICATGF--RPGFDIFTPWKV 136
Query: 62 DFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAI-LNLFWGVLLWKRKAEEA 115
D T NLVDA V F++VSS+ N PA + LNLF L+ K +AE+
Sbjct: 137 DNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKY 196
Query: 116 LIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL 175
+ SG+ YTIVRPGG++ T N+ + EDTL+ G +S VAE+ A A +
Sbjct: 197 IKKSGINYTIVRPGGLKNDPP----TGNVVMEPEDTLYEGSISRDLVAEV-AVEALLQEE 251
Query: 176 SYCKVVEVIAETTAPLTPMEELLAKIPSQ 204
S KVVE++A AP ++L A + Q
Sbjct: 252 SSFKVVEIVARAEAPKRSYKDLFASVKGQ 280
|
|
| TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 162 (62.1 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 58 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 117
P ++D+ KN +DAA +A V H ++V S+G P L +L+WKRKAE+ L
Sbjct: 105 PEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLA 163
Query: 118 ASGLPYTIVRPGGMERPTDAYKET---HNITLSQEDT--LFGGQVSNLQVAELLACMAKN 172
SG PYTI+R GG+ +E + L Q DT + V+ + + LL AKN
Sbjct: 164 DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKN 223
Query: 173 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204
++ E T+ P + L +++ S+
Sbjct: 224 KAFDLGSKPE---GTSTPTKDFKALFSQVTSR 252
|
|
| TAIR|locus:2040716 AT2G37660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 162 (62.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 42/145 (28%), Positives = 75/145 (51%)
Query: 58 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEAL 116
P ++D+ KN +DAA A V ++V S+G P +I N +L+WKRKAE+ L
Sbjct: 177 PEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYL 234
Query: 117 IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL-ACM-AKNRS 174
SG+PYTI+R GG++ +E + + ++D L + + A++ C+ A
Sbjct: 235 ADSGIPYTIIRAGGLQDKDGGIRE---LLVGKDDELLETETRTIARADVAEVCVQALQLE 291
Query: 175 LSYCKVVEVIAETTAPLTPMEELLA 199
+ K +++ ++ TP ++ A
Sbjct: 292 EAKFKALDLASKPEGTGTPTKDFKA 316
|
|
| TAIR|locus:2102842 PTAC16 "plastid transcriptionally active 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 79/329 (24%), Positives = 142/329 (43%)
Query: 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP-YRIDFQATKNLVDAA 73
V+ L V+ + I A+GNA+ V+ +GA+E GP ++ +V AA
Sbjct: 146 VKRLNAVQSPFQDAESIAKAIGNATKVVVTVGATEN------GPDAQVSTSDALLVVQAA 199
Query: 74 TIAKVNHFIMV--SSLGTNKFGFPAAILNLFWGVLLWKRKAE------EALIASGLPYTI 125
+A V+H +V ++ + + I + F+G L K + E + + + YT+
Sbjct: 200 ELAGVSHVAIVYDGTISGSTYNVLDGITS-FFGNLFAKSQPLTISDLIEKVAQTDVAYTL 258
Query: 126 VRPGGME--RPTDAYKETHNITLSQEDTLFGG--------QVSNLQVAELLACMAKNRSL 175
++ E P AY N+ +S E + G +V L++A L+A + N ++
Sbjct: 259 IKTSLTEDFSPEKAY----NVVVSAEGSNSGSGSSSSEAYKVPKLKIASLVADIFANTAV 314
Query: 176 SYCKVVEVIAETTAPLTPMEELLAKIPS--QRAEPKESIAPEKSDPAASKSMISEESSAP 233
+ KVVEV + +AP P++EL + IP +R ++IA E+++ A + +A
Sbjct: 315 AENKVVEVSTDPSAPSRPVDELFSVIPEDGRRKVYADAIARERAEEEAKVAADKAREAAE 374
Query: 234 ITEEPVQTKAKVTDPLSPYTSY-EDLKXXXXXXXXXXXG--KKDSTIVDGLPMSGI-SDA 289
+E + K+++ + S ED + G K I GL + + S
Sbjct: 375 AAKEFEKQMQKLSEKEAEAASLAEDAQQKADAVGVTVDGLFNKAKDISSGLSWNKLGSQF 434
Query: 290 QTSTSGVKTGITETVSAPEELSKARPLSP 318
T+ V+ +KAR L P
Sbjct: 435 ATAIQNASETPKVQVATVRGQAKARNLPP 463
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 404 369 0.00085 117 3 11 23 0.48 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 602 (64 KB)
Total size of DFA: 211 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.38u 0.12s 35.50t Elapsed: 00:00:02
Total cpu time: 35.38u 0.12s 35.50t Elapsed: 00:00:02
Start: Sat May 11 08:46:54 2013 End: Sat May 11 08:46:56 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8H0U5 | TIC62_ARATH | No assigned EC number | 0.5612 | 0.9678 | 0.6099 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 404 | |||
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 0.0 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 3e-46 | |
| PLN00141 | 251 | PLN00141, PLN00141, Tic62-NAD(P)-related group II | 8e-25 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 3e-16 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-12 | |
| CHL00194 | 317 | CHL00194, ycf39, Ycf39; Provisional | 4e-09 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 2e-08 | |
| cd05250 | 214 | cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical | 3e-08 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 3e-08 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 4e-08 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 8e-08 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 6e-07 | |
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 1e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-05 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 3e-05 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 5e-05 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 3e-04 | |
| cd05267 | 203 | cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | 7e-04 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 0.004 |
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Score = 514 bits (1326), Expect = 0.0
Identities = 266/401 (66%), Positives = 291/401 (72%), Gaps = 13/401 (3%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
MKLD E G QPVE LE+VECDLEK QI PALGNASVVICCIGASEKEVFD+TGPYR
Sbjct: 127 MKLDVE----GTQPVEKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYR 182
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
ID+ ATKNLVDAAT+AKVNHFI+V+SLGTNK GFPAAILNLFWGVL WKRKAEEALIASG
Sbjct: 183 IDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEALIASG 242
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 180
LPYTIVRPGGMERPTDAYKETHN+TLS+EDTLFGGQVSNLQVAEL+ACMAKNR LSYCKV
Sbjct: 243 LPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKV 302
Query: 181 VEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQ 240
VEVIAETTAPLTPMEELLAKIPSQR PKES A + P +K + E S PI EEP Q
Sbjct: 303 VEVIAETTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQ 362
Query: 241 TKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKD-STIVDGLPMSGISDAQTSTSGVKTG 299
KA V PLSPYT+YEDLKPPTSP PT PS S VD + D S G +
Sbjct: 363 PKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPS-PGSASN 421
Query: 300 ITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLTGGN 359
+ E A E K RPLSPY YEDLKPP+SPSPT S + S +
Sbjct: 422 VPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTG------VSPSVSSTSSVPAVP 475
Query: 360 DVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 400
D A + P ++ SPY +Y+DLKPPTSP P+
Sbjct: 476 DTA-PATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPA 515
|
Length = 576 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 3e-46
Identities = 63/196 (32%), Positives = 84/196 (42%), Gaps = 24/196 (12%)
Query: 6 ELANKGIQPVEM--------------LELVECDLEKRVQIEPALGNASVVICCIGASEKE 51
EL ++G Q + E+V DL + AL VI G+ K
Sbjct: 18 ELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEGIDAVISAAGSGGK- 76
Query: 52 VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK 111
+D+ NL+DAA A V F++VSS+G +K P L L KRK
Sbjct: 77 --GGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP---LEALGPYLDAKRK 131
Query: 112 AEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK 171
AE+ L ASGL YTIVRPGG+ TD T + L + T G +S VAE+LA
Sbjct: 132 AEDYLRASGLDYTIVRPGGL---TDDPAGTGRVVLGGDGTRLDGPISRADVAEVLAEALD 188
Query: 172 NRSLSYCKVVEVIAET 187
+ K E+
Sbjct: 189 T-PAAIGKTFELGGGD 203
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 8e-25
Identities = 76/196 (38%), Positives = 106/196 (54%), Gaps = 17/196 (8%)
Query: 18 LELVECDL-EKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI 75
L++V D+ E ++ A+G+ S VIC G + FD P+++D T NLV+A
Sbjct: 64 LQIVRADVTEGSDKLVEAIGDDSDAVICATGF--RRSFDPFAPWKVDNFGTVNLVEACRK 121
Query: 76 AKVNHFIMVSSLGTN-----KFGFPAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPG 129
A V FI+VSS+ N + PA I LNLF L+ K +AE+ + SG+ YTIVRPG
Sbjct: 122 AGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPG 181
Query: 130 GM-ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188
G+ P T NI + EDTL+ G +S QVAE +A A S KVVE++A
Sbjct: 182 GLTNDPP-----TGNIVMEPEDTLYEGSISRDQVAE-VAVEALLCPESSYKVVEIVARAD 235
Query: 189 APLTPMEELLAKIPSQ 204
AP ++L A I +
Sbjct: 236 APKRSYKDLFASIKQK 251
|
Length = 251 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 3e-16
Identities = 39/126 (30%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 9 NKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKN 68
N P + V+ DL + AL V+ GA D K+
Sbjct: 31 NPSKAPAPGVTPVQKDLFDLADLAEALAGVDAVVDAFGARPD-----------DSDGVKH 79
Query: 69 LVDAATIAKVNHFIMVSSLGT---NKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTI 125
L+DAA A V ++VS+ G F LF K AEE L ASGL +TI
Sbjct: 80 LLDAAARAGVRRIVVVSAAGLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTI 139
Query: 126 VRPGGM 131
VRPG +
Sbjct: 140 VRPGAL 145
|
Length = 182 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 1e-12
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 14 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA 73
E + +VE DL + A+ VVI GA D +D + T+N+++AA
Sbjct: 39 DQEPVAVVEGDLRDLDSLSDAVQGVDVVIHLAGAPR----DTRDFCEVDVEGTRNVLEAA 94
Query: 74 TIAKVNHFIMVSSLGTNKFGFPAA--ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 130
A V HFI +SSLG + L K K E L + LPYTIVRPG
Sbjct: 95 KEAGVKHFIFISSLGAYGDLHEETEPSPSSP--YLAVKAKTEAVLREASLPYTIVRPGV 151
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 78
ELV DL + P+ + +I AS D+ +ID+ L++AA AK+
Sbjct: 46 ELVYGDLSLPETLPPSFKGVTAII---DASTSRPSDLYNAKQIDWDGKLALIEAAKAAKI 102
Query: 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA--EEALIASGLPYTIVRPGG 130
FI S L ++ + + L K K+ E+ L SG+PYTI R G
Sbjct: 103 KRFIFFSILNAEQYPY----------IPLMKLKSDIEQKLKKSGIPYTIFRLAG 146
|
Length = 317 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 2e-08
Identities = 39/130 (30%), Positives = 50/130 (38%), Gaps = 32/130 (24%)
Query: 6 ELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCI----GASEKEVFDITGPYRI 61
LA G+ E+V+ DL+ +E AL V E E+
Sbjct: 40 ALAAPGV------EVVQGDLDDPESLEAALKGVYGVFLVTDFWEAGGEDEIA-------- 85
Query: 62 DFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA--EEALIAS 119
Q KN+VDAA A V HF+ S K + KA EE + AS
Sbjct: 86 --QG-KNVVDAAKRAGVQHFVFSSVPDVEKLTLAVPH---------FDSKAEVEEYIRAS 133
Query: 120 GLPYTIVRPG 129
GLP TI+RP
Sbjct: 134 GLPATILRPA 143
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 24 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 83
D E+ + A N V CC+G + K+ ++D L A A V HF++
Sbjct: 52 DFERLDEYLEAFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFLL 111
Query: 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPY-TIVRPG 129
VSSLG + + L K + E L G TI RPG
Sbjct: 112 VSSLGADP--------KSSFLYLKVKGEVERDLQKLGFERLTIFRPG 150
|
Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 52 VFDITGPYRID-FQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR 110
+ I+ D Q KN +DAA A V H + +S+ G + + L
Sbjct: 66 LLLISPSDLEDRIQQHKNFIDAAKQAGVKHIVYLSASGAD----EDSPF-LLAR---DHG 117
Query: 111 KAEEALIASGLPYTIVRPG 129
E+ L ASG+PYTI+RPG
Sbjct: 118 ATEKYLEASGIPYTILRPG 136
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 4e-08
Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 27/152 (17%)
Query: 18 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 77
L++V+ D+ ++ AL VI +G P + + T+N+V A A
Sbjct: 43 LKVVQGDVLDLEDVKEALEGQDAVISALGTRNDL-----SPTTLHSEGTRNIVSAMKAAG 97
Query: 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLL----WKR------KAEEALIASGLPYTIVR 127
V I+V G+ + L LL +R + + L SGL +T VR
Sbjct: 98 VKRLIVVGGAGS---LDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVR 154
Query: 128 P---------GGMERPTDAYKETHNITLSQED 150
P GG R +S+ D
Sbjct: 155 PPALFDGGATGGYYRVELLVDAKGGSRISRAD 186
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 8e-08
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 20 LVECDLEKRVQIEPALGNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIAKV 78
VE DL I AL + VVI +G E + F + + + L AA A V
Sbjct: 51 FVEFDLRDDESIRKALEGSDVVINLVGRLYETKNFSF---EDVHVEGPERLAKAAKEAGV 107
Query: 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG---GME 132
I +S+LG + P+ L K + EEA+ + TIVRP G E
Sbjct: 108 ERLIHISALGADANS-PSKYLRS-------KAEGEEAVREAFPEATIVRPSVVFGRE 156
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 6e-07
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 19/114 (16%)
Query: 19 ELVECDLEKRVQIEPALGNASVVICCIG-ASEKEVFDITGPYRIDFQATKNLVDAATIAK 77
ELVE DL+ + AL VV G KE+ D K L DAA A
Sbjct: 46 ELVEGDLDDHESLVEALKGVDVVFSVTGFWLSKEIED-----------GKKLADAAKEAG 94
Query: 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--KRKAEEALIASGLPYTIVRPG 129
V HFI S G + + V + K + E + A G+PYT V G
Sbjct: 95 VKHFIP-SEFGND----VDRSNGVEPAVPHFDSKAEVERYIRALGIPYTFVYAG 143
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 16 EMLELVECDLEKRVQIEPALGNAS----VVICCIGASEKEVFDITGPYRIDFQATKNLVD 71
E+V D+ + L + VV+ C+ + V D ++ID+QATKN +D
Sbjct: 111 PGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKD---SWKIDYQATKNSLD 167
Query: 72 AATIAKVNHFIMVSSLGTNK--FGFPAAILNLFWGVLLWKRKAEEALIA--SGLPYTIVR 127
A HF+++S++ K F A K K E L A S Y+IVR
Sbjct: 168 AGREVGAKHFVLLSAICVQKPLLEFQRA-----------KLKFEAELQALDSDFTYSIVR 216
Query: 128 P 128
P
Sbjct: 217 P 217
|
Length = 390 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 15/128 (11%)
Query: 18 LELVECDLEKRVQIEPAL-GNASVVI---CCIGASEKEVFDITGPYRIDFQATKNLVDAA 73
+E V DL R ++ G VI + D ++ T NL++AA
Sbjct: 44 VEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA 103
Query: 74 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-------KRKAEEAL----IASGLP 122
A V F+ SS+ P ++ G K AE+ L GLP
Sbjct: 104 RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLP 163
Query: 123 YTIVRPGG 130
I+RP
Sbjct: 164 VVILRPFN 171
|
Length = 314 |
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 190 PLTPMEELLAKIPSQRAEPKESIA--PEKSDPAASKSMISEESSAPITEEPVQTKAKVTD 247
PL+P P P + S K S +A E+
Sbjct: 496 PLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQ--HHAQPKPR 553
Query: 248 PLSPYTSYEDLKPPTSPTPTAP 269
PLSPYT YEDLKPPTSPTP+
Sbjct: 554 PLSPYTMYEDLKPPTSPTPSPV 575
|
Length = 576 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 38/155 (24%), Positives = 57/155 (36%), Gaps = 34/155 (21%)
Query: 7 LANKGIQPVEMLELVE---CDLEKRVQIEPALGNAS--VVICCIGASEKEVFDITGPYRI 61
+ N+G ++ E VE D R +E LG VV+ I + ++V
Sbjct: 29 VFNRGRTKPDLPEGVEHIVGDRNDRDALEELLGGEDFDVVVDTIAYTPRQV-------ER 81
Query: 62 DFQATKNLVDAATIAKVNHFIMVSSLG-----------TNKFGFPAAILNLFWGVL-LWK 109
A K +V +I +SS + P A+ K
Sbjct: 82 ALDAFKG--------RVKQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGK 133
Query: 110 RKAEEALI-ASGLPYTIVRPGGMERPTD-AYKETH 142
R AE+ LI A+ PYTIVRP + P D + +
Sbjct: 134 RAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAY 168
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 23/115 (20%)
Query: 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 78
++V D + AL VI +G + I Q L+DAA A V
Sbjct: 47 KVVPVDYASHESLVAALKGVDAVISALGGAA-----------IGDQ--LKLIDAAIAAGV 93
Query: 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE--EALIAS--GLPYTIVRPG 129
FI ++FG + + L+ K + L A GLP+T V G
Sbjct: 94 KRFI------PSEFGVDYDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTYVSTG 142
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 7e-04
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 9/116 (7%)
Query: 64 QATKNLVDAATIAKVNHFIMVSSLGTN---KFGFPAAILNLFWGVLLWKRKAEEALIASG 120
Q +N+V A V I +SLG F L RK+ + S
Sbjct: 80 QQAENVVQAMKAVGVKRLIWTTSLGIYDEVPGKFGEWNKEFIGNYLAPYRKSAAVIENSD 139
Query: 121 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GGQVSNLQVAELLACMAKNRSL 175
L YT++RP + + + L+ + F G +VS VA+L+ + +
Sbjct: 140 LDYTLLRPAWLT-----NNDEIDYELTPKGEAFKGTEVSRKSVADLITDIINHPDY 190
|
These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.004
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 21 VECDLEKRVQIEPALGNASVVI--CCIGASEKEV-FDITGPYRIDFQATKNLVDAATIAK 77
+E D+ + + AL + VVI I + D +++ + T+N++DA A
Sbjct: 50 IEGDVTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTI--MKVNVKGTQNVLDACVKAG 107
Query: 78 VNHFIMVSS---LGTNKFGFPAAILN 100
V + SS +G N +G P I+N
Sbjct: 108 VRVLVYTSSMEVVGPNSYGQP--IVN 131
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 404 | |||
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 100.0 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.86 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.85 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.84 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.83 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.81 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.81 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.79 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.79 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.79 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.78 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.78 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.77 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.77 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.77 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.76 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.76 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.76 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.76 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.75 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.75 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.75 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.74 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.74 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.74 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.73 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.73 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.73 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.73 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.73 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.73 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.73 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.73 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.72 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.72 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.72 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.72 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.72 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.71 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.71 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.7 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.7 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.7 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.7 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.7 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.7 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.69 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.69 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.69 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.69 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.68 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.67 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.65 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.63 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.62 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.61 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.6 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.56 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.54 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.5 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.49 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.49 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.44 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.43 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.43 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.4 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.39 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.37 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.36 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.24 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.22 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.21 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.21 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.21 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.18 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.17 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.15 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.15 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.15 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.14 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.14 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.14 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.09 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.08 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.07 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.07 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.05 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.04 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.04 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.03 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.03 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.02 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.01 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.01 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.0 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.99 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.99 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.99 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.98 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.98 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.98 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.96 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.95 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.94 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.93 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.92 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.91 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.9 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.89 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.88 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.85 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.85 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.84 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.83 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.83 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.82 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.82 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.81 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.8 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.8 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.79 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.78 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.78 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.78 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.77 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.76 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.75 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.75 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.75 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.74 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.74 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.74 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.74 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.74 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK08643 | 256 | acetoin reductase; Validated | 98.72 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.71 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.71 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.7 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.68 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.68 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.67 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.67 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.66 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.64 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.61 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.59 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.58 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.58 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.58 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.57 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.56 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.56 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.55 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.55 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.55 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.53 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.51 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.51 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.49 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.48 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.48 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.47 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.47 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.46 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.46 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.46 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.46 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.44 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.43 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.42 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.42 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.41 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.41 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.4 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.39 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.39 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.39 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.38 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.38 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.36 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.35 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.34 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.34 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.33 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.32 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.31 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.31 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.31 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.29 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.27 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.27 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.26 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.21 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.21 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.2 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.2 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.2 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.19 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.17 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.14 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.08 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 97.99 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 97.99 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.93 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.9 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 97.89 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 97.84 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.79 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.77 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 97.73 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.66 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.53 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.53 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.48 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.43 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 97.4 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 97.39 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 97.38 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 97.34 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.3 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.22 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 97.2 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.19 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.03 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 96.87 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 96.77 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 96.39 | |
| PLN00106 | 323 | malate dehydrogenase | 96.03 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 95.51 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 95.3 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 94.18 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 93.28 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 93.17 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 92.67 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 92.41 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 91.16 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 90.1 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 90.0 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 89.88 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 88.89 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 88.84 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 88.23 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 87.53 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 87.01 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 86.63 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 81.85 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 81.12 |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-67 Score=544.52 Aligned_cols=379 Identities=67% Similarity=1.010 Sum_probs=320.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.+++..+|.++|+||||+|.......++...+++|+.++.+|+++|++.|++|||++||++++.....
T Consensus 138 ~~v~iV~gDLtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p 217 (576)
T PLN03209 138 EKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFP 217 (576)
T ss_pred CceEEEEecCCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCcc
Confidence 56899999999999999999999999999997644334566778899999999999999999999999999987533222
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCCC
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
....+.+++|..+|+.+|++|+..||+|++||||+++++.+.+...+.+.+...+...++.++++|||++|++++.++..
T Consensus 218 ~~~~~sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~a 297 (576)
T PLN03209 218 AAILNLFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRL 297 (576)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchh
Confidence 22234567899999999999999999999999999988755433334455444444556689999999999999998876
Q ss_pred CCCcEEEEEcCCCCCCccHHHHHHHcccccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCcccccccCCCCCCCCccC
Q 015570 176 SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSY 255 (404)
Q Consensus 176 ~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 255 (404)
..+++|+|+++......+|.++|..|......++++.++++..+.|+++|.++++..+.++++.|++++..||||||++|
T Consensus 298 s~~kvvevi~~~~~p~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (576)
T PLN03209 298 SYCKVVEVIAETTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAY 377 (576)
T ss_pred ccceEEEEEeCCCCCCCCHHHHHHhcccccCCCCcccccccCCCCCCcccCCCCCCCcccccCCCCcCCCCCCCCCcccc
Confidence 78999999999988899999999999999988999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 015570 256 EDLKPPTSPTPTAPSGKKD-STIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPT 334 (404)
Q Consensus 256 ~dlkpp~sp~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rplspy~~y~dlkpp~sp~p~ 334 (404)
+||||||||+|++++++.. ..++|++.++.++++..+. ...+.+.+......+.++.||||||++|+||||||||+|+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (576)
T PLN03209 378 EDLKPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSP-GSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPT 456 (576)
T ss_pred ccCCCCCCCCCCCCCCCCCCCCcccccccCccCCCCCCC-CccccCccccccccccCCCCCCCcccccccCCCCCCCCCC
Confidence 9999999999999998777 7788999999999988764 4455666655666677899999999999999999999999
Q ss_pred CCCCCcccCCCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCC
Q 015570 335 PSGPKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPSPK 402 (404)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~y~d~kpp~sp~p~~~ 402 (404)
++.... .+.....+...+++++.+.++.+++++.+++ +||||||+||+||||||||||+.+
T Consensus 457 ~~~~~~----~~~~~~~~~~~~~~~~~~~a~~d~~~~~~~~---~~plspy~~y~d~kpp~sp~p~~~ 517 (576)
T PLN03209 457 APTGVS----PSVSSTSSVPAVPDTAPATAATDAAAPPPAN---MRPLSPYAVYDDLKPPTSPSPAAP 517 (576)
T ss_pred CCCCcc----cccccccccCCCCCCCCcccccccccCCCCC---CCCCCcchhhcccCCCCCCCcccc
Confidence 975532 1222333335567777776777889999998 999999999999999999999653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=302.87 Aligned_cols=154 Identities=43% Similarity=0.662 Sum_probs=116.8
Q ss_pred CCCCcccccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCC
Q 015570 234 ITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKA 313 (404)
Q Consensus 234 ~~~~~~~~~~~~~~p~~~~~~~~dlkpp~sp~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (404)
.+.++.|.+.+..||||||..|+||||||||+|+++++...+.. .....++.+.+. ..+.++.++ .....+.
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~a~~d~~---~~~~~~~ 494 (576)
T PLN03209 423 PEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVS----STSSVPAVPDTA-PATAATDAA---APPPANM 494 (576)
T ss_pred ccccccccccCCCCCCCcccccccCCCCCCCCCCCCCCcccccc----cccccCCCCCCC-Ccccccccc---cCCCCCC
Confidence 45678888999999999999999999999999999766553221 111112222111 111112221 1224689
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCC
Q 015570 314 RPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKP 393 (404)
Q Consensus 314 rplspy~~y~dlkpp~sp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~y~d~kp 393 (404)
||||||++|.|||||+||||+++.+++. .+++ .+...++|+++.+...+++|+.+|| +||||||+|||||||
T Consensus 495 ~plspy~~y~d~kpp~sp~p~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 566 (576)
T PLN03209 495 RPLSPYAVYDDLKPPTSPSPAAPVGKVA---PSST--NEVVKVGNSAPPTALADEQHHAQPK---PRPLSPYTMYEDLKP 566 (576)
T ss_pred CCCCcchhhcccCCCCCCCccccCCccC---cccc--cccccccccCCcccccccccccCCC---CCCCCccchhhccCC
Confidence 9999999999999999999999988763 2222 4456778999998899999999999 999999999999999
Q ss_pred CCCCCCCCCC
Q 015570 394 PTSPIPSPKK 403 (404)
Q Consensus 394 p~sp~p~~~~ 403 (404)
||||+||.+.
T Consensus 567 ~~~~~~~~~~ 576 (576)
T PLN03209 567 PTSPTPSPVL 576 (576)
T ss_pred CCCCCCCCCC
Confidence 9999999763
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.7e-21 Score=185.87 Aligned_cols=192 Identities=18% Similarity=0.148 Sum_probs=147.8
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCC-CCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC---
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEV-FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF--- 92 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~-~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~--- 92 (404)
..+++++|++|.+++.++|+|+|+|||+|+...... ...+.++++|+.|++||+++|++.+|+||||+||.++...
T Consensus 46 ~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~ 125 (280)
T PF01073_consen 46 VKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYK 125 (280)
T ss_pred ceeEEEeccccHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccC
Confidence 344999999999999999999999999999764432 3456688999999999999999999999999999987433
Q ss_pred CCc------hh--hcccchHHHHHHHHHHHHHHH-C--------CCCEEEEEcCccCCCCCCccC--------cc-cEEE
Q 015570 93 GFP------AA--ILNLFWGVLLWKRKAEEALIA-S--------GLPYTIVRPGGMERPTDAYKE--------TH-NITL 146 (404)
Q Consensus 93 ~~~------~~--~~~~~~~y~~sK~~~E~~l~~-~--------gl~~tIlRpg~~~G~~~~~~~--------~~-~i~~ 146 (404)
... .. .......|+.+|..+|+++++ . .|.+++|||..|||+++.... .+ ....
T Consensus 126 ~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~ 205 (280)
T PF01073_consen 126 GDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQ 205 (280)
T ss_pred CCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhccccee
Confidence 111 10 122456899999999999986 2 288999999999999875321 11 1222
Q ss_pred ccCCccccCcccHHHHHHHHHHHHh---CC---CCCCCcEEEEEcCCCCCCcc-HHHHHHHcccccCCCCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAK---NR---SLSYCKVVEVIAETTAPLTP-MEELLAKIPSQRAEPKES 211 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~---~~---~~~~~~i~nI~~~~~~~~~s-i~ell~~i~~~~g~~~~~ 211 (404)
.+++....++++++|||.+.+.+++ ++ ....|+.|.|.+++. .. +.++++.+.+.+|.+...
T Consensus 206 ~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p---~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 206 IGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEP---VPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred ecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCc---cCcHHHHHHHHHHHCCCCCCc
Confidence 3334445679999999999877653 22 345799999999985 55 999999999999966543
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-20 Score=182.44 Aligned_cols=178 Identities=20% Similarity=0.272 Sum_probs=141.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.+++..+|+|+|+|||+++... .+...+.++|+.++.+|+++|+++||+||||+|+.+++...
T Consensus 43 ~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~---~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~-- 117 (317)
T CHL00194 43 WGAELVYGDLSLPETLPPSFKGVTAIIDASTSRP---SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYP-- 117 (317)
T ss_pred cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCC---CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccC--
Confidence 5899999999999999999999999999986432 23455678899999999999999999999999997664322
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCC-cc----CcccEEEccCCccccCcccHHHHHHHHHHHH
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA-YK----ETHNITLSQEDTLFGGQVSNLQVAELLACMA 170 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~-~~----~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l 170 (404)
...|..+|.++|+++++.|++|++||++.+|+.... .. ....+.+. ++.....+|+++|||++++.++
T Consensus 118 ------~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l 190 (317)
T CHL00194 118 ------YIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWIT-NESTPISYIDTQDAAKFCLKSL 190 (317)
T ss_pred ------CChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEec-CCCCccCccCHHHHHHHHHHHh
Confidence 135788999999999999999999999998864211 00 01122222 2333457899999999999999
Q ss_pred hCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 171 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 171 ~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+++. ..+++|||++++. +++.|+++.+.+.+|.+.
T Consensus 191 ~~~~-~~~~~~ni~g~~~---~s~~el~~~~~~~~g~~~ 225 (317)
T CHL00194 191 SLPE-TKNKTFPLVGPKS---WNSSEIISLCEQLSGQKA 225 (317)
T ss_pred cCcc-ccCcEEEecCCCc---cCHHHHHHHHHHHhCCCC
Confidence 8765 4689999999975 899999999999998643
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.8e-20 Score=183.27 Aligned_cols=189 Identities=15% Similarity=0.005 Sum_probs=149.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|+.|.+.+..+++++|+|||+|+.... ...++..++++|+.++.+|+++|++.|+++|||+||.++++..
T Consensus 69 ~~~~~~~~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~ 148 (348)
T PRK15181 69 SRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDH 148 (348)
T ss_pred CceEEEEccCCCHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCC
Confidence 46889999999999999999999999999986432 2245556789999999999999999999999999999887532
Q ss_pred C-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc---------------CcccEEEccC
Q 015570 94 F-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQE 149 (404)
Q Consensus 94 ~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~---------------~~~~i~~~~~ 149 (404)
. +.....+...|+.+|..+|++++. .|+++++||++.+||+++... ....+.+.++
T Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~ 228 (348)
T PRK15181 149 PDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGD 228 (348)
T ss_pred CCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCC
Confidence 1 112334567899999999998763 589999999999999864311 1123445555
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
+...+++||++|+|++++.++.... ...+++|||++++. .++.|+++.+.+.++.
T Consensus 229 g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~---~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 229 GSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR---TSLNELYYLIRDGLNL 284 (348)
T ss_pred CCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc---EeHHHHHHHHHHHhCc
Confidence 6666789999999999988776432 12478999998875 8999999999888773
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.7e-20 Score=174.33 Aligned_cols=188 Identities=14% Similarity=0.088 Sum_probs=151.2
Q ss_pred eEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCC--CCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 18 LELVECDLEKRVQIEPALG--NASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~--~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
+++++||+.|...|.+.|+ .+|+|||+||.. ..+..++-.|++.|+.++.+|+++|+++||++|||.||+.+|+..
T Consensus 46 ~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p 125 (329)
T COG1087 46 FKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEP 125 (329)
T ss_pred CceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCC
Confidence 6899999999999999996 799999999986 445678889999999999999999999999999999999998765
Q ss_pred Cc-----hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCC------cc---------------Cccc
Q 015570 94 FP-----AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDA------YK---------------ETHN 143 (404)
Q Consensus 94 ~~-----~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~------~~---------------~~~~ 143 (404)
.. .....+.++|+++|+.+|++|++ .++.+++||.+++.|.... .. ....
T Consensus 126 ~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~ 205 (329)
T COG1087 126 TTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDK 205 (329)
T ss_pred CCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCce
Confidence 32 23566788999999999999986 6899999999999874321 00 0112
Q ss_pred EEEcc------CCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 144 ITLSQ------EDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 144 i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+.+.+ ++..++++||+.|+|++-+.+++.-... ...+||++.+.. +|+.|+++.+.++.|.+
T Consensus 206 l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G---~SV~evi~a~~~vtg~~ 274 (329)
T COG1087 206 LFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNG---FSVLEVIEAAKKVTGRD 274 (329)
T ss_pred eEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCc---eeHHHHHHHHHHHhCCc
Confidence 33443 2345567999999999988777543222 236999999997 99999999999998854
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.4e-19 Score=179.17 Aligned_cols=188 Identities=14% Similarity=0.115 Sum_probs=142.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|+.|.+.+.++++++|+|||||+..... ..+.......|+.++.+|+++|++.+ +||||+||.++|+..
T Consensus 65 ~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~ 143 (386)
T PLN02427 65 GRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKT 143 (386)
T ss_pred CCeEEEEcCCCChHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCC
Confidence 479999999999999999999999999999864321 12333445689999999999999887 899999999887532
Q ss_pred C-----chhh----------------------cccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc---
Q 015570 94 F-----PAAI----------------------LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--- 139 (404)
Q Consensus 94 ~-----~~~~----------------------~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~--- 139 (404)
. .... ..+.+.|+.+|..+|++++. .|+++++||++++||++....
T Consensus 144 ~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~ 223 (386)
T PLN02427 144 IGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGI 223 (386)
T ss_pred cCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccc
Confidence 1 0000 01234799999999999974 589999999999999864210
Q ss_pred -------------------CcccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC-CCCCCccHHHHHH
Q 015570 140 -------------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLA 199 (404)
Q Consensus 140 -------------------~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~-~~~~~~si~ell~ 199 (404)
....+.+.+++...+.+||++|+|++++.++++.....+++|||+++ +. +++.|+++
T Consensus 224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~---~s~~el~~ 300 (386)
T PLN02427 224 DGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNE---VTVRQLAE 300 (386)
T ss_pred cccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCC---ccHHHHHH
Confidence 11123344444455689999999999999998764234789999986 34 89999999
Q ss_pred HcccccCC
Q 015570 200 KIPSQRAE 207 (404)
Q Consensus 200 ~i~~~~g~ 207 (404)
.+.+..|.
T Consensus 301 ~i~~~~g~ 308 (386)
T PLN02427 301 MMTEVYAK 308 (386)
T ss_pred HHHHHhcc
Confidence 99888773
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=175.35 Aligned_cols=185 Identities=15% Similarity=-0.007 Sum_probs=144.5
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC---CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~---~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.++++.+|++|.+.+..++.++|+||||++.... ...+.......|+.++.+|+++|++.++++|||+||.++|+..
T Consensus 65 ~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~ 144 (370)
T PLN02695 65 CHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEF 144 (370)
T ss_pred cceEEECCCCCHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCc
Confidence 3688999999999999999999999999986421 1123344567899999999999999999999999998876532
Q ss_pred Cc---------hh--hcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC----------------cc
Q 015570 94 FP---------AA--ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE----------------TH 142 (404)
Q Consensus 94 ~~---------~~--~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~----------------~~ 142 (404)
.. .. ...+...|+.+|..+|++++. .|++++++|++++||++..+.. ..
T Consensus 145 ~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 224 (370)
T PLN02695 145 KQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTD 224 (370)
T ss_pred cccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCC
Confidence 10 11 234567899999999998864 6999999999999998653211 12
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
.+.+...+...+++||++|++++++.++.+.. +++|||++++. +++.|+++.+.+..|.
T Consensus 225 ~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~nv~~~~~---~s~~el~~~i~~~~g~ 283 (370)
T PLN02695 225 EFEMWGDGKQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEM---VSMNEMAEIALSFENK 283 (370)
T ss_pred CeEEeCCCCeEEeEEeHHHHHHHHHHHHhccC---CCceEecCCCc---eeHHHHHHHHHHHhCC
Confidence 33444455556789999999999999887643 57999999875 8999999999888875
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=170.46 Aligned_cols=187 Identities=13% Similarity=0.060 Sum_probs=146.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHh---------CCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATI---------AKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~---------agVkrfI 82 (404)
.+++++.+|++|.+.+.++++ ++|+||||+|..... ..++...+++|+.++.+|+++|.+ .++++||
T Consensus 51 ~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i 130 (355)
T PRK10217 51 ERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFH 130 (355)
T ss_pred CceEEEECCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEE
Confidence 368899999999999999998 489999999875322 224566788999999999999986 3578999
Q ss_pred EeccCcccCCC-------CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------C
Q 015570 83 MVSSLGTNKFG-------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------E 140 (404)
Q Consensus 83 ~vSS~gv~~~~-------~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~ 140 (404)
++||.++++.. .+.....+...|+.+|..+|.+++. .+++++++|++.+||+++... .
T Consensus 131 ~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~ 210 (355)
T PRK10217 131 HISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALA 210 (355)
T ss_pred EecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhc
Confidence 99998776532 1112334567899999999998863 689999999999999876321 1
Q ss_pred cccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 141 THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 141 ~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
...+.+.+++...+++||++|++++++.+++... .+++|||++++. +++.|+++.+.+.+|.
T Consensus 211 ~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~--~~~~yni~~~~~---~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 211 GKPLPVYGNGQQIRDWLYVEDHARALYCVATTGK--VGETYNIGGHNE---RKNLDVVETICELLEE 272 (355)
T ss_pred CCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCC--CCCeEEeCCCCc---ccHHHHHHHHHHHhcc
Confidence 1224444555566789999999999999998644 368999999985 8999999999998874
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.3e-18 Score=169.41 Aligned_cols=189 Identities=18% Similarity=0.166 Sum_probs=144.5
Q ss_pred CCeEEEEcCCC-CHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 16 EMLELVECDLE-KRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 16 ~gveiV~gDl~-d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
.+++++.+|+. +.+.+..+++++|+||||++.... ...++...+++|+.++.+|+++|++.+ +||||+||..+++.
T Consensus 46 ~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~ 124 (347)
T PRK11908 46 PRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGM 124 (347)
T ss_pred CCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeecc
Confidence 57999999997 677888889999999999986432 134556667899999999999999988 69999999988653
Q ss_pred CC-----chhh-------cccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------------
Q 015570 93 GF-----PAAI-------LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK----------------- 139 (404)
Q Consensus 93 ~~-----~~~~-------~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~----------------- 139 (404)
.. ++.. .++.+.|+.+|..+|++++. .|++++++|++.+||++....
T Consensus 125 ~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~ 204 (347)
T PRK11908 125 CPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGH 204 (347)
T ss_pred CCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHH
Confidence 21 1111 13456899999999999974 689999999999999864210
Q ss_pred --CcccEEEccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 140 --ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 140 --~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
....+.+...+...+.+||++|++++++.++++... ..+++|||+++. ..+++.|+++.|.+.+|.
T Consensus 205 ~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~--~~~s~~e~~~~i~~~~~~ 273 (347)
T PRK11908 205 IVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPK--NNHSVRELANKMLELAAE 273 (347)
T ss_pred HhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCC--CCcCHHHHHHHHHHHhcC
Confidence 112233444455567899999999999999987531 347899999852 138999999999988874
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.5e-18 Score=170.21 Aligned_cols=182 Identities=17% Similarity=0.066 Sum_probs=138.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCc-ccCCC-
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG-TNKFG- 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~g-v~~~~- 93 (404)
.+++++.+|++|.+.+..+++++|+|||||+... .++...++.|+.++.+|+++|++.+++||||+||.+ +++..
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~ 136 (342)
T PLN02214 60 ERLILCKADLQDYEALKAAIDGCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPN 136 (342)
T ss_pred CcEEEEecCcCChHHHHHHHhcCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCC
Confidence 3688999999999999999999999999998753 245567889999999999999999999999999964 54321
Q ss_pred -------Cchh------hcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCc---cc-EE--Ec---
Q 015570 94 -------FPAA------ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET---HN-IT--LS--- 147 (404)
Q Consensus 94 -------~~~~------~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~---~~-i~--~~--- 147 (404)
.+.. ..++...|+.+|..+|++++. .|+++++|||+++||++...... .. +. .+
T Consensus 137 ~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~ 216 (342)
T PLN02214 137 RDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAK 216 (342)
T ss_pred CCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc
Confidence 1110 112456799999999999974 59999999999999986542110 00 00 00
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
..+...+.+||++|||++++.+++++.. ++.||++++. .++.|+++.+.+..+
T Consensus 217 ~~~~~~~~~i~V~Dva~a~~~al~~~~~--~g~yn~~~~~----~~~~el~~~i~~~~~ 269 (342)
T PLN02214 217 TYANLTQAYVDVRDVALAHVLVYEAPSA--SGRYLLAESA----RHRGEVVEILAKLFP 269 (342)
T ss_pred cCCCCCcCeeEHHHHHHHHHHHHhCccc--CCcEEEecCC----CCHHHHHHHHHHHCC
Confidence 0112235799999999999999987652 4589988753 789999999998875
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.1e-18 Score=165.08 Aligned_cols=188 Identities=11% Similarity=0.013 Sum_probs=145.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCC-EEEEeccCccc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTN 90 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVk-rfI~vSS~gv~ 90 (404)
.+++++.+|+.|.+++.+++++ +|+||||++.... ...+...++++|+.++.+|+++|.+.+++ +||++||.+++
T Consensus 50 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~ 129 (317)
T TIGR01181 50 PRYRFVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVY 129 (317)
T ss_pred CCcEEEEcCCcCHHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecccee
Confidence 4789999999999999999987 9999999987532 22345566789999999999999987554 89999998775
Q ss_pred CCCC------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEEccC
Q 015570 91 KFGF------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQE 149 (404)
Q Consensus 91 ~~~~------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~~~~ 149 (404)
+... ......+...|+.+|..+|.+++. .+++++++|++.+||+..... ....+.+...
T Consensus 130 g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (317)
T TIGR01181 130 GDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGD 209 (317)
T ss_pred CCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCC
Confidence 5321 112334456899999999998863 689999999999999754321 1122334444
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+...+++||++|+|+++..++++.. .+++||+++++. +++.|+++.+.+..|.+
T Consensus 210 g~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~~~~---~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 210 GQQVRDWLYVEDHCRAIYLVLEKGR--VGETYNIGGGNE---RTNLEVVETILELLGKD 263 (317)
T ss_pred CceEEeeEEHHHHHHHHHHHHcCCC--CCceEEeCCCCc---eeHHHHHHHHHHHhCCC
Confidence 4556689999999999999997643 468999999875 89999999999888853
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.9e-18 Score=167.94 Aligned_cols=187 Identities=11% Similarity=0.023 Sum_probs=146.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhC---------CCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA---------KVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~a---------gVkrfI 82 (404)
.+++++.+|++|.+++.++++ ++|+|||||+.... ...++...+++|+.++.+|+++|++. ++++||
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i 129 (352)
T PRK10084 50 ERYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFH 129 (352)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEE
Confidence 457889999999999999986 58999999987532 22345678899999999999999874 567999
Q ss_pred EeccCcccCCC---------------CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC---
Q 015570 83 MVSSLGTNKFG---------------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--- 140 (404)
Q Consensus 83 ~vSS~gv~~~~---------------~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~--- 140 (404)
++||..+++.. .+.....+...|+.+|..+|++++. .|++++++|++.+||+++....
T Consensus 130 ~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~ 209 (352)
T PRK10084 130 HISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIP 209 (352)
T ss_pred EecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHH
Confidence 99998776531 1112345667899999999998864 5899999999999998753211
Q ss_pred --------cccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 141 --------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 141 --------~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
...+.+.+++...+++|+++|++++++.++++.. .+++|||++++. .++.++++.+.+.+|.
T Consensus 210 ~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~--~~~~yni~~~~~---~s~~~~~~~i~~~~~~ 279 (352)
T PRK10084 210 LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGK--AGETYNIGGHNE---KKNLDVVLTICDLLDE 279 (352)
T ss_pred HHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--CCceEEeCCCCc---CcHHHHHHHHHHHhcc
Confidence 1234455555566789999999999999988643 378999999875 8888888888888774
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.4e-18 Score=170.49 Aligned_cols=177 Identities=23% Similarity=0.265 Sum_probs=140.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC----CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~----gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++.+|++|.+.+.++++ ++|+||||++.... .....+++|+.++.+|+++|++.|++|||++|+.+++.
T Consensus 111 ~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~---~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~ 187 (390)
T PLN02657 111 PGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTG---GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK 187 (390)
T ss_pred CCceEEEeeCCCHHHHHHHHHHhCCCCcEEEECCccCCC---CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC
Confidence 579999999999999999987 59999999985322 22345678999999999999999999999999987753
Q ss_pred CCCchhhcccchHHHHHHHHHHHHHHH--CCCCEEEEEcCccCCCCCCc----cCcccEEEccCCccc-cCcccHHHHHH
Q 015570 92 FGFPAAILNLFWGVLLWKRKAEEALIA--SGLPYTIVRPGGMERPTDAY----KETHNITLSQEDTLF-GGQVSNLQVAE 164 (404)
Q Consensus 92 ~~~~~~~~~~~~~y~~sK~~~E~~l~~--~gl~~tIlRpg~~~G~~~~~----~~~~~i~~~~~~~~~-~~~Is~~DVA~ 164 (404)
. ...|..+|..+|++++. .+++|+||||++||+..... .....+.+.+++... ..+|+++|+|+
T Consensus 188 p---------~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~ 258 (390)
T PLN02657 188 P---------LLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLAS 258 (390)
T ss_pred c---------chHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHH
Confidence 2 34578999999999986 89999999999999753211 112233344444432 35799999999
Q ss_pred HHHHHHhCCCCCCCcEEEEEcC-CCCCCccHHHHHHHcccccCCC
Q 015570 165 LLACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 165 ai~~~l~~~~~~~~~i~nI~~~-~~~~~~si~ell~~i~~~~g~~ 208 (404)
+++.++.++. ..+++|||+++ +. +++.|+++.+.+.+|.+
T Consensus 259 ~i~~~~~~~~-~~~~~~~Iggp~~~---~S~~Eia~~l~~~lG~~ 299 (390)
T PLN02657 259 FIADCVLDES-KINKVLPIGGPGKA---LTPLEQGEMLFRILGKE 299 (390)
T ss_pred HHHHHHhCcc-ccCCEEEcCCCCcc---cCHHHHHHHHHHHhCCC
Confidence 9999998765 45799999985 44 89999999999988864
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.4e-18 Score=183.75 Aligned_cols=189 Identities=14% Similarity=0.083 Sum_probs=148.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHh--CCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcc
Q 015570 15 VEMLELVECDLEKRVQIEPAL--GNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGT 89 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL--~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv 89 (404)
..+++++.+|+.|.+.+..++ .++|+|||||+..... ..+...++++|+.++.+|+++|++.+ ++||||+||..+
T Consensus 56 ~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~v 135 (668)
T PLN02260 56 SPNFKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV 135 (668)
T ss_pred CCCeEEEECCCCChHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHH
Confidence 357999999999998888766 5899999999976422 12334567899999999999999987 899999999988
Q ss_pred cCCCCc--------hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEE
Q 015570 90 NKFGFP--------AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITL 146 (404)
Q Consensus 90 ~~~~~~--------~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~ 146 (404)
++.... .....+.+.|+.+|..+|++++. .++++++||++++||+++... ....+.+
T Consensus 136 yg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i 215 (668)
T PLN02260 136 YGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPI 215 (668)
T ss_pred hCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEE
Confidence 654311 11233567899999999999974 589999999999999875321 1123445
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+++...+++||++|+|++++.++++.. .+++|||++++. +++.|+++.+.+..|..
T Consensus 216 ~g~g~~~r~~ihV~Dva~a~~~~l~~~~--~~~vyni~~~~~---~s~~el~~~i~~~~g~~ 272 (668)
T PLN02260 216 HGDGSNVRSYLYCEDVAEAFEVVLHKGE--VGHVYNIGTKKE---RRVIDVAKDICKLFGLD 272 (668)
T ss_pred ecCCCceEeeEEHHHHHHHHHHHHhcCC--CCCEEEECCCCe---eEHHHHHHHHHHHhCCC
Confidence 5555666789999999999999987654 378999998875 89999999999988853
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.2e-18 Score=173.18 Aligned_cols=187 Identities=13% Similarity=0.023 Sum_probs=141.6
Q ss_pred CeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCC---CCcchhhHHHHHHHHHHHHHhCCCC-EEEEeccCc
Q 015570 17 MLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFD---ITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLG 88 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d---~~~~~~vnv~~~~~Ll~Aa~~agVk-rfI~vSS~g 88 (404)
+++++.+|+.|.+.+.++++ ++|+|||+|+..... ..+ +...+++|+.++.+|+++|++.|++ |||++||..
T Consensus 114 ~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~ 193 (442)
T PLN02572 114 EIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMG 193 (442)
T ss_pred cceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecce
Confidence 68999999999999999998 589999999764321 112 2334678999999999999999986 999999998
Q ss_pred ccCCCC----c-----------h---hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-------
Q 015570 89 TNKFGF----P-----------A---AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK------- 139 (404)
Q Consensus 89 v~~~~~----~-----------~---~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~------- 139 (404)
+|+... + . ....+...|+.+|..+|.+++. .||++++||++.+||+++...
T Consensus 194 vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li 273 (442)
T PLN02572 194 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELI 273 (442)
T ss_pred ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccc
Confidence 876321 0 0 1234456899999999998864 599999999999999864320
Q ss_pred ---------------------CcccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCC-CcEEEEEcCCCCCCccHHHH
Q 015570 140 ---------------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY-CKVVEVIAETTAPLTPMEEL 197 (404)
Q Consensus 140 ---------------------~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~-~~i~nI~~~~~~~~~si~el 197 (404)
....+.+.+++...+++||++|++++++.++++....+ ..+||++++. +++.|+
T Consensus 274 ~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~----~si~el 349 (442)
T PLN02572 274 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQ----FSVNEL 349 (442)
T ss_pred cccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCc----eeHHHH
Confidence 01124455555666789999999999999998653111 2589987643 899999
Q ss_pred HHHcccc---cCC
Q 015570 198 LAKIPSQ---RAE 207 (404)
Q Consensus 198 l~~i~~~---~g~ 207 (404)
++.+.+. +|.
T Consensus 350 ~~~i~~~~~~~g~ 362 (442)
T PLN02572 350 AKLVTKAGEKLGL 362 (442)
T ss_pred HHHHHHHHHhhCC
Confidence 9999887 664
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-17 Score=163.80 Aligned_cols=185 Identities=15% Similarity=0.058 Sum_probs=136.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCC-cchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcc--cC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGT--NK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~-~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv--~~ 91 (404)
.+++++.+|+.|.+.+..+++++|+|||+|+.......+.. ..+++|+.++.+|+++|.+. +++||||+||.++ ++
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~ 134 (322)
T PLN02662 55 ERLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYN 134 (322)
T ss_pred CceEEEeccccCcchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCC
Confidence 47899999999999999999999999999987643333333 56788999999999999987 8999999999763 32
Q ss_pred CC--------Cchhhccc------chHHHHHHHHHHHHHH----HCCCCEEEEEcCccCCCCCCccCc---ccE-EE--c
Q 015570 92 FG--------FPAAILNL------FWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET---HNI-TL--S 147 (404)
Q Consensus 92 ~~--------~~~~~~~~------~~~y~~sK~~~E~~l~----~~gl~~tIlRpg~~~G~~~~~~~~---~~i-~~--~ 147 (404)
.. .+.....+ ...|+.+|..+|++++ +.|+++++||++.+||+....... ..+ .+ .
T Consensus 135 ~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~ 214 (322)
T PLN02662 135 GKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLING 214 (322)
T ss_pred CcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcC
Confidence 11 00001111 1479999999999876 369999999999999986432100 000 00 0
Q ss_pred --cCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 148 --QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 148 --~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
......+.+||++|||++++.+++++.. ++.|++++.. +++.|+++.+.+..+
T Consensus 215 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~g~~----~s~~e~~~~i~~~~~ 269 (322)
T PLN02662 215 AQTFPNASYRWVDVRDVANAHIQAFEIPSA--SGRYCLVERV----VHYSEVVKILHELYP 269 (322)
T ss_pred CccCCCCCcCeEEHHHHHHHHHHHhcCcCc--CCcEEEeCCC----CCHHHHHHHHHHHCC
Confidence 0112345789999999999999987653 3478887543 899999999988765
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=155.06 Aligned_cols=181 Identities=37% Similarity=0.518 Sum_probs=137.7
Q ss_pred CCeEEEEcCCCC-HhhHHHHh-CCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEK-RVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d-~~~l~~aL-~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|++| .+.+...+ .++|+|||++|.... .+....+.+|+.+..++++++++.+++||||+||.++++..
T Consensus 62 ~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~--~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~ 139 (251)
T PLN00141 62 PSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRS--FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAA 139 (251)
T ss_pred CceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCcC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCC
Confidence 479999999998 46787888 699999999986432 12233456888899999999999999999999999876432
Q ss_pred Cc--hh----hcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHH
Q 015570 94 FP--AA----ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 167 (404)
Q Consensus 94 ~~--~~----~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~ 167 (404)
.. .. ..+.+..+...|..+|+++++.|++|++||||++++... .+.+.+........++|+++|||++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~----~~~~~~~~~~~~~~~~i~~~dvA~~~~ 215 (251)
T PLN00141 140 MGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPP----TGNIVMEPEDTLYEGSISRDQVAEVAV 215 (251)
T ss_pred cccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCC----CceEEECCCCccccCcccHHHHHHHHH
Confidence 11 00 112234456789999999999999999999999997532 223333333333456899999999999
Q ss_pred HHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccc
Q 015570 168 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 203 (404)
Q Consensus 168 ~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~ 203 (404)
.++.++. ..++++.+++.+.-...++.++++.+++
T Consensus 216 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 216 EALLCPE-SSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred HHhcChh-hcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 9998877 4568899998777677999999999875
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=158.33 Aligned_cols=181 Identities=14% Similarity=0.056 Sum_probs=145.5
Q ss_pred cCCCCHhhHHHHhC--CCCEEEEcCcCC--CCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC-----CC
Q 015570 23 CDLEKRVQIEPALG--NASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK-----FG 93 (404)
Q Consensus 23 gDl~d~~~l~~aL~--gvDvVI~~ag~~--~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~-----~~ 93 (404)
+|++|.+.+.+.++ ..|+|||||+++ +.+..+++..+.+|..+..||+++|.+.|. ++||+||-++.. ..
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y 112 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPY 112 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCC
Confidence 59999999999998 569999999997 444556677789999999999999999998 799999988721 23
Q ss_pred CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCc-------ccEEEccCCccccCcccHHHHHHHH
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET-------HNITLSQEDTLFGGQVSNLQVAELL 166 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~-------~~i~~~~~~~~~~~~Is~~DVA~ai 166 (404)
.+.+..++.+.||++|+.+|+.++..+-.++|||.+|+||........ ..-.+....+.++..++..|+|++|
T Consensus 113 ~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i 192 (281)
T COG1091 113 KETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAI 192 (281)
T ss_pred CCCCCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHH
Confidence 445678889999999999999999999999999999999974422111 1112333345566789999999999
Q ss_pred HHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 167 ACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 167 ~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
..++..... +++||+++... .||-|+++.|.+..+...
T Consensus 193 ~~ll~~~~~--~~~yH~~~~g~---~Swydfa~~I~~~~~~~~ 230 (281)
T COG1091 193 LELLEKEKE--GGVYHLVNSGE---CSWYEFAKAIFEEAGVDG 230 (281)
T ss_pred HHHHhcccc--CcEEEEeCCCc---ccHHHHHHHHHHHhCCCc
Confidence 999987653 44999999984 789999999998887433
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-17 Score=162.18 Aligned_cols=186 Identities=18% Similarity=0.097 Sum_probs=136.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCC-CcchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~-~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|++|.+.+.++++++|+|||+|+.......+. ...++.|+.++.+|+++|++. +++||||+||.+++...
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~ 135 (322)
T PLN02986 56 ERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFR 135 (322)
T ss_pred CceEEEecCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecC
Confidence 4789999999999999999999999999999754322232 245788999999999999985 79999999998753211
Q ss_pred C----------chhhc------ccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCc---ccE-EEccC
Q 015570 94 F----------PAAIL------NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET---HNI-TLSQE 149 (404)
Q Consensus 94 ~----------~~~~~------~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~---~~i-~~~~~ 149 (404)
. +.... .....|+.+|..+|++++. .|+++++|||+.+||+....... ..+ .+..+
T Consensus 136 ~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g 215 (322)
T PLN02986 136 QPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFING 215 (322)
T ss_pred CccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcC
Confidence 0 00011 1235699999999988864 69999999999999986432100 000 00001
Q ss_pred ----CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 150 ----DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 150 ----~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
+...+.+|+++|+|++++.+++++.. +++||+.++. +++.|+++.|.+..+.
T Consensus 216 ~~~~~~~~~~~v~v~Dva~a~~~al~~~~~--~~~yni~~~~----~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 216 KNLFNNRFYRFVDVRDVALAHIKALETPSA--NGRYIIDGPI----MSVNDIIDILRELFPD 271 (322)
T ss_pred CCCCCCcCcceeEHHHHHHHHHHHhcCccc--CCcEEEecCC----CCHHHHHHHHHHHCCC
Confidence 12234689999999999999987653 4589996543 8999999999998763
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-17 Score=159.72 Aligned_cols=181 Identities=15% Similarity=0.087 Sum_probs=139.0
Q ss_pred EcCCCCHhhHHHHhCCC--CEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC----
Q 015570 22 ECDLEKRVQIEPALGNA--SVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---- 93 (404)
Q Consensus 22 ~gDl~d~~~l~~aL~gv--DvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~---- 93 (404)
.+|+.|.+.+.++++++ |+||||++..... ..+....+++|+.++.+|+++|++.++ +||++||.++++..
T Consensus 33 ~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~ 111 (287)
T TIGR01214 33 QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRP 111 (287)
T ss_pred ccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCC
Confidence 47999999999999876 9999999875321 123344578999999999999999886 89999998876432
Q ss_pred -CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc----------CcccEEEccCCccccCcccHHHH
Q 015570 94 -FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK----------ETHNITLSQEDTLFGGQVSNLQV 162 (404)
Q Consensus 94 -~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~----------~~~~i~~~~~~~~~~~~Is~~DV 162 (404)
.+....++...|+.+|..+|++++..+++++++|++++||+..... ....+.+.. ...+.+++++|+
T Consensus 112 ~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dv 189 (287)
T TIGR01214 112 YREDDATNPLNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDL 189 (287)
T ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHH
Confidence 1122344567899999999999999899999999999999864211 011122221 234578999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 163 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 163 A~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
|++++.++.+.. ..+++|||++++. +++.|+++.+.+..|...
T Consensus 190 a~a~~~~~~~~~-~~~~~~ni~~~~~---~s~~e~~~~i~~~~~~~~ 232 (287)
T TIGR01214 190 ARVIAALLQRLA-RARGVYHLANSGQ---CSWYEFAQAIFEEAGADG 232 (287)
T ss_pred HHHHHHHHhhcc-CCCCeEEEECCCC---cCHHHHHHHHHHHhCccc
Confidence 999999998763 3578999999875 899999999999888543
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.6e-17 Score=159.92 Aligned_cols=179 Identities=10% Similarity=-0.010 Sum_probs=128.7
Q ss_pred EEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC--
Q 015570 20 LVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-- 93 (404)
Q Consensus 20 iV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~-- 93 (404)
.+.+|++|.+.+.++++ ++|+|||||+..... ..++...+++|+.++.+|+++|++.|+ +|||+||..+++..
T Consensus 35 ~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~ 113 (299)
T PRK09987 35 DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGD 113 (299)
T ss_pred cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCC
Confidence 34689999999999998 589999999976432 234455568999999999999999997 79999998886432
Q ss_pred ---CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc---------CcccEEEccC--CccccCcccH
Q 015570 94 ---FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQE--DTLFGGQVSN 159 (404)
Q Consensus 94 ---~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~---------~~~~i~~~~~--~~~~~~~Is~ 159 (404)
.+.+..++.+.|+.+|..+|++++....+++|||++++||+++... ....+.+..+ +...+.+...
T Consensus 114 ~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~ 193 (299)
T PRK09987 114 IPWQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLA 193 (299)
T ss_pred CCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHH
Confidence 2233456778899999999999998778899999999999854211 1122333332 1111122344
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccc
Q 015570 160 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204 (404)
Q Consensus 160 ~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~ 204 (404)
+|+++++..++.... .+++||+++++. +++.|+++.|.+.
T Consensus 194 d~~~~~~~~~~~~~~--~~giyni~~~~~---~s~~e~~~~i~~~ 233 (299)
T PRK09987 194 DCTAHAIRVALNKPE--VAGLYHLVASGT---TTWHDYAALVFEE 233 (299)
T ss_pred HHHHHHHHHhhccCC--CCCeEEeeCCCC---ccHHHHHHHHHHH
Confidence 556666666664433 246999999886 8888888887664
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.7e-17 Score=162.97 Aligned_cols=184 Identities=15% Similarity=0.117 Sum_probs=133.6
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCC-CcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCCC-
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG- 93 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~-~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~~- 93 (404)
+++++.+|++|.+.+.++++++|+|||||+.......+. ...+++|+.++.+|+++|.+.+ ++||||+||.+++...
T Consensus 57 ~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~ 136 (351)
T PLN02650 57 RLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEE 136 (351)
T ss_pred ceEEEEecCCChhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCC
Confidence 588999999999999999999999999998754322233 3567899999999999999977 8899999998654321
Q ss_pred ------Cchh---------hcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCcccE----E-Ecc-
Q 015570 94 ------FPAA---------ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNI----T-LSQ- 148 (404)
Q Consensus 94 ------~~~~---------~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~~~i----~-~~~- 148 (404)
.+.. ...+.+.|+.+|..+|++++. .|++++++||+++||++........+ . ...
T Consensus 137 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~ 216 (351)
T PLN02650 137 HQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN 216 (351)
T ss_pred CCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCC
Confidence 0110 011235799999999998864 59999999999999986432100000 0 000
Q ss_pred ----CCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 149 ----EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 149 ----~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.....+++||++|+|++++.++++... +++| ++++.. +++.|+++.|.+.++
T Consensus 217 ~~~~~~~~~r~~v~V~Dva~a~~~~l~~~~~--~~~~-i~~~~~---~s~~el~~~i~~~~~ 272 (351)
T PLN02650 217 EAHYSIIKQGQFVHLDDLCNAHIFLFEHPAA--EGRY-ICSSHD---ATIHDLAKMLREKYP 272 (351)
T ss_pred ccccCcCCCcceeeHHHHHHHHHHHhcCcCc--CceE-EecCCC---cCHHHHHHHHHHhCc
Confidence 011125799999999999999987542 3478 455543 899999999988765
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-17 Score=158.34 Aligned_cols=189 Identities=22% Similarity=0.159 Sum_probs=145.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCC-CEEEEcCcCCCCCCC---CCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALGNA-SVVICCIGASEKEVF---DITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gv-DvVI~~ag~~~~~~~---d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++.+|++|.+.+..++.++ |+|||+++....... ++..++.+|+.++.+|+++|++.+++||||.||.+++.
T Consensus 42 ~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~ 121 (314)
T COG0451 42 SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVY 121 (314)
T ss_pred cccceeeecccchHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceEC
Confidence 46899999999998888888888 999999998754332 22347899999999999999999999999988876544
Q ss_pred CC------Cch-hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCc--------------cc-EE
Q 015570 92 FG------FPA-AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET--------------HN-IT 145 (404)
Q Consensus 92 ~~------~~~-~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~--------------~~-i~ 145 (404)
.. .+. ....+...|+.+|..+|++++. .|+++++||++++||+++..... .. +.
T Consensus 122 ~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (314)
T COG0451 122 GDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIV 201 (314)
T ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcce
Confidence 22 111 2334444799999999999986 37999999999999987654210 00 12
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+..++...+.+++++|++++++.++++... + +||++++. ...++.|+++.+.+.+|...
T Consensus 202 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~-~~ni~~~~--~~~~~~e~~~~~~~~~~~~~ 260 (314)
T COG0451 202 IGGDGSQTRDFVYVDDVADALLLALENPDG--G-VFNIGSGT--AEITVRELAEAVAEAVGSKA 260 (314)
T ss_pred EeCCCceeEeeEeHHHHHHHHHHHHhCCCC--c-EEEeCCCC--CcEEHHHHHHHHHHHhCCCC
Confidence 222333334689999999999999998874 2 99999985 12899999999999888553
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.4e-17 Score=157.73 Aligned_cols=182 Identities=15% Similarity=0.074 Sum_probs=136.3
Q ss_pred EEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC---CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 21 VECDLEKRVQIEPALG--NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 21 V~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~---~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
..+|+.|.+.+.++++ ++|+|||||+.... ...++..+++.|+.++.+|+++|++.+++||||+||..+++....
T Consensus 31 ~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~ 110 (306)
T PLN02725 31 KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAP 110 (306)
T ss_pred ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCC
Confidence 3689999999999887 57999999987431 223556678899999999999999999999999999988653211
Q ss_pred -----hh----hcccch-HHHHHHHHHHHHHH----HCCCCEEEEEcCccCCCCCCccC-------------------cc
Q 015570 96 -----AA----ILNLFW-GVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------------TH 142 (404)
Q Consensus 96 -----~~----~~~~~~-~y~~sK~~~E~~l~----~~gl~~tIlRpg~~~G~~~~~~~-------------------~~ 142 (404)
.. ...+.. .|+.+|..+|++++ ..+++++++|++++||+++.... ..
T Consensus 111 ~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 190 (306)
T PLN02725 111 QPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGA 190 (306)
T ss_pred CCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCC
Confidence 11 112222 49999999998775 36899999999999998653210 01
Q ss_pred cEEE-ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 143 NITL-SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 143 ~i~~-~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
.+.+ .+.+...+.+||++|++++++.++++.. ..+.||+++++. +++.|+++.+.+..|.
T Consensus 191 ~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~--~~~~~ni~~~~~---~s~~e~~~~i~~~~~~ 251 (306)
T PLN02725 191 PEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS--GAEHVNVGSGDE---VTIKELAELVKEVVGF 251 (306)
T ss_pred CeEEEcCCCCeeeccccHHHHHHHHHHHHhccc--cCcceEeCCCCc---ccHHHHHHHHHHHhCC
Confidence 1222 3344455679999999999999998653 256789988875 8889998888887763
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.4e-17 Score=161.19 Aligned_cols=186 Identities=17% Similarity=0.066 Sum_probs=136.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcccCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKF 92 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv~~~ 92 (404)
.+++++.+|++|.+.+.++++++|+||||||..... ..++...+++|+.++.+|+++|.+. ++++||++||.+++..
T Consensus 56 ~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~ 135 (325)
T PLN02989 56 ERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLA 135 (325)
T ss_pred CceEEEeCCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheec
Confidence 468999999999999999999999999999965321 1233455788999999999999885 6789999999865422
Q ss_pred C----------Cchhhccc------chHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCcc---cE-EEcc
Q 015570 93 G----------FPAAILNL------FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH---NI-TLSQ 148 (404)
Q Consensus 93 ~----------~~~~~~~~------~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~~---~i-~~~~ 148 (404)
. .+.....+ ...|+.+|..+|++++. .|++++++|++.+||++....... .+ .+..
T Consensus 136 ~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~ 215 (325)
T PLN02989 136 PETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMK 215 (325)
T ss_pred CCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHc
Confidence 1 11111222 24699999999999864 689999999999999865431100 00 0001
Q ss_pred CC----ccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 149 ED----TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 149 ~~----~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
++ ...+.+||++|+|++++.++++... +++||+.++. +++.|+++.|.+..+.
T Consensus 216 ~~~~~~~~~r~~i~v~Dva~a~~~~l~~~~~--~~~~ni~~~~----~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 216 GKNPFNTTHHRFVDVRDVALAHVKALETPSA--NGRYIIDGPV----VTIKDIENVLREFFPD 272 (325)
T ss_pred CCCCCCCcCcCeeEHHHHHHHHHHHhcCccc--CceEEEecCC----CCHHHHHHHHHHHCCC
Confidence 11 1124689999999999999987652 4689996543 8999999999998863
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.8e-17 Score=144.76 Aligned_cols=143 Identities=29% Similarity=0.302 Sum_probs=116.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+++++.+|+.|.+.+.++|+++|+|||+++.... +...+++++++|++.|++|||++|+.+++....
T Consensus 38 ~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~-----------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~ 106 (183)
T PF13460_consen 38 SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK-----------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPP 106 (183)
T ss_dssp CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT-----------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCT
T ss_pred ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc-----------cccccccccccccccccccceeeeccccCCCCC
Confidence 579999999999999999999999999999987543 277899999999999999999999999877542
Q ss_pred ch---hhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHh
Q 015570 95 PA---AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK 171 (404)
Q Consensus 95 ~~---~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~ 171 (404)
.. .....+..|...|.++|+.+++++++|++|||++|||.... ...+ +...+.....+|+++|||++|+.+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~---~~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 107 GLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSR---SYRL-IKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp SEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSS---SEEE-ESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred cccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCc---ceeE-EeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 21 12334468999999999999999999999999999997422 2222 22233444579999999999999987
Q ss_pred C
Q 015570 172 N 172 (404)
Q Consensus 172 ~ 172 (404)
|
T Consensus 183 ~ 183 (183)
T PF13460_consen 183 N 183 (183)
T ss_dssp -
T ss_pred C
Confidence 5
|
... |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.9e-17 Score=167.81 Aligned_cols=181 Identities=12% Similarity=0.057 Sum_probs=138.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|+.+. .+.++|+|||||+.... ...+...+++.|+.++.+|+++|++.++ +|||+||.++|+..
T Consensus 168 ~~~~~~~~Di~~~-----~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~ 241 (436)
T PLN02166 168 PRFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDP 241 (436)
T ss_pred CceEEEECccccc-----cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCC
Confidence 4688888888764 35689999999986432 2234556788999999999999999986 89999999887632
Q ss_pred C-----ch-----hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-------------CcccEEE
Q 015570 94 F-----PA-----AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------ETHNITL 146 (404)
Q Consensus 94 ~-----~~-----~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-------------~~~~i~~ 146 (404)
. +. ....+...|+.+|..+|++++. .+++++++|++++||+++... ....+.+
T Consensus 242 ~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v 321 (436)
T PLN02166 242 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTV 321 (436)
T ss_pred CCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEE
Confidence 1 11 1223356799999999999874 589999999999999864211 1123444
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+++...+.+||++|++++++.++++.. +++|||++++. +++.|+++.|.+.+|..
T Consensus 322 ~g~g~~~rdfi~V~Dva~ai~~~~~~~~---~giyNIgs~~~---~Si~ela~~I~~~~g~~ 377 (436)
T PLN02166 322 YGDGKQTRSFQYVSDLVDGLVALMEGEH---VGPFNLGNPGE---FTMLELAEVVKETIDSS 377 (436)
T ss_pred eCCCCeEEeeEEHHHHHHHHHHHHhcCC---CceEEeCCCCc---EeHHHHHHHHHHHhCCC
Confidence 4555566789999999999999997543 56999998875 89999999999988743
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.3e-17 Score=157.43 Aligned_cols=183 Identities=13% Similarity=0.045 Sum_probs=138.9
Q ss_pred EEEEcCCCCHhhHHHHh----CCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 19 ELVECDLEKRVQIEPAL----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL----~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+.+|+.+.+.+..+. .++|+|||||+.......++...+++|+.++.+|+++|.+.++ +|||+||.++++...
T Consensus 44 ~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~ 122 (314)
T TIGR02197 44 LVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGE 122 (314)
T ss_pred eeeeccCcchhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCC
Confidence 45678888887777655 4899999999976544455666778999999999999999987 799999998875321
Q ss_pred ----chh-hcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccC---------------cccEEEc-
Q 015570 95 ----PAA-ILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE---------------THNITLS- 147 (404)
Q Consensus 95 ----~~~-~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~---------------~~~i~~~- 147 (404)
... ...+.+.|+.+|..+|+++++ .++.+++||++.+||+++.... ...+.+.
T Consensus 123 ~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (314)
T TIGR02197 123 AGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFK 202 (314)
T ss_pred CCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEec
Confidence 111 123667899999999999874 3578999999999998643210 1112222
Q ss_pred -----cCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 148 -----QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 148 -----~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
..+...+++||++|++++++.++.. . .+++||+++++. +++.|+++.+.+..|.+
T Consensus 203 ~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~--~~~~yni~~~~~---~s~~e~~~~i~~~~g~~ 262 (314)
T TIGR02197 203 SSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-G--VSGIFNLGTGRA---RSFNDLADAVFKALGKD 262 (314)
T ss_pred CccccCCCCceeeeEEHHHHHHHHHHHHhc-c--cCceEEcCCCCC---ccHHHHHHHHHHHhCCC
Confidence 1233445799999999999999987 3 367999999875 89999999999988854
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.3e-17 Score=174.50 Aligned_cols=189 Identities=15% Similarity=0.140 Sum_probs=143.7
Q ss_pred CCeEEEEcCCCCHhh-HHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 16 EMLELVECDLEKRVQ-IEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 16 ~gveiV~gDl~d~~~-l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
.+++++.+|++|... +.++++++|+|||||+.... ...++...+++|+.++.+|+++|++.+ +||||+||..+++.
T Consensus 360 ~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~ 438 (660)
T PRK08125 360 PRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGM 438 (660)
T ss_pred CceEEEeccccCcHHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCC
Confidence 579999999998655 57788999999999986532 223444567899999999999999998 79999999887763
Q ss_pred CC-----chhh-------cccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------------
Q 015570 93 GF-----PAAI-------LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK----------------- 139 (404)
Q Consensus 93 ~~-----~~~~-------~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~----------------- 139 (404)
.. +... ..+.+.|+.+|..+|++++. .|++++++|++++||++....
T Consensus 439 ~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~ 518 (660)
T PRK08125 439 CTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 518 (660)
T ss_pred CCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHH
Confidence 21 1111 02335799999999999964 589999999999999864210
Q ss_pred --CcccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 140 --ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 140 --~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
....+.+.+++...+++||++|++++++.++++.. ...+++|||++++. ..++.|+++.+.+..|.
T Consensus 519 ~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~--~~s~~el~~~i~~~~g~ 587 (660)
T PRK08125 519 LVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDN--EASIRELAEMLLASFEK 587 (660)
T ss_pred hcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCC--ceeHHHHHHHHHHHhcc
Confidence 01223344455566789999999999999998653 22468999998741 28999999999998884
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=158.01 Aligned_cols=185 Identities=17% Similarity=0.118 Sum_probs=133.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCC-cchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~-~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|++|.+.+.++++++|+|||||+.......+.. .++++|+.++.+|++++.+. +++||||+||..+++..
T Consensus 59 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~ 138 (338)
T PLN00198 59 GDLKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSIN 138 (338)
T ss_pred CceEEEEcCCCChHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeecc
Confidence 36899999999999999999999999999986532222222 34688999999999999886 68999999998775421
Q ss_pred C---------ch---------hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCcc---------
Q 015570 94 F---------PA---------AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH--------- 142 (404)
Q Consensus 94 ~---------~~---------~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~~--------- 142 (404)
. +. ....+...|+.+|..+|++++. .|++++++|++++||++.......
T Consensus 139 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~ 218 (338)
T PLN00198 139 KLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLI 218 (338)
T ss_pred CCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHH
Confidence 0 00 0123456799999999998874 589999999999999864211000
Q ss_pred ---cEEEcc-CCcc----ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 143 ---NITLSQ-EDTL----FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 143 ---~i~~~~-~~~~----~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+.+.+ .+.. .+++||++|++++++.+++.... ++.|+..+ .. .++.|+++.+.+..+
T Consensus 219 ~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~--~~~~~~~~-~~---~s~~el~~~i~~~~~ 284 (338)
T PLN00198 219 TGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESA--SGRYICCA-AN---TSVPELAKFLIKRYP 284 (338)
T ss_pred cCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCc--CCcEEEec-CC---CCHHHHHHHHHHHCC
Confidence 111111 1111 14799999999999999987542 34674444 32 789999999887765
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.8e-17 Score=152.91 Aligned_cols=193 Identities=12% Similarity=0.027 Sum_probs=161.5
Q ss_pred CCCCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCC--CCCCCCCCcchhhHHHHHHHHHHHHHhCCCC-EEEEeccC
Q 015570 13 QPVEMLELVECDLEKRVQIEPALG--NASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSL 87 (404)
Q Consensus 13 ~~~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~--~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVk-rfI~vSS~ 87 (404)
...++..++++|+.|.+.+.++++ ..|+|+|.|+-+ +.+..++..+.+.|+.|+.+|++++++...+ ||+++|+-
T Consensus 48 ~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTD 127 (340)
T COG1088 48 EDSPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTD 127 (340)
T ss_pred hcCCCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccc
Confidence 345799999999999999999998 699999999865 5556778889999999999999999998754 89999999
Q ss_pred cccCCCC-------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEE
Q 015570 88 GTNKFGF-------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNIT 145 (404)
Q Consensus 88 gv~~~~~-------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~ 145 (404)
.+++.-. +.+..++-.+|.++|+....+++. .||+++|.|+++-||+..... ....+.
T Consensus 128 EVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lp 207 (340)
T COG1088 128 EVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLP 207 (340)
T ss_pred cccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCc
Confidence 8876432 234677888999999999988875 799999999999999876542 224567
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKE 210 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~ 210 (404)
+.+++...++|++++|-++++..++..... |++|||+++.. .+-.|++..|++.+|+.+.
T Consensus 208 vYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~--GE~YNIgg~~E---~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 208 VYGDGLQIRDWLYVEDHCRAIDLVLTKGKI--GETYNIGGGNE---RTNLEVVKTICELLGKDKP 267 (340)
T ss_pred eecCCcceeeeEEeHhHHHHHHHHHhcCcC--CceEEeCCCcc---chHHHHHHHHHHHhCcccc
Confidence 888888899999999999999999998884 99999999986 6666777777777775443
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.7e-17 Score=158.41 Aligned_cols=181 Identities=13% Similarity=0.034 Sum_probs=131.1
Q ss_pred EEEcCCCCHh---h-HHHHhC-----CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 20 LVECDLEKRV---Q-IEPALG-----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 20 iV~gDl~d~~---~-l~~aL~-----gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
++.+|+.|.. . +..++. ++|+|||||+.......+....++.|+.++.+|+++|++.++ +|||+||.+++
T Consensus 42 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vy 120 (308)
T PRK11150 42 LVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATY 120 (308)
T ss_pred hhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHh
Confidence 4456665543 2 333332 699999999864332223344678999999999999999998 69999999886
Q ss_pred CCCC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC--------------cc-cEEE
Q 015570 91 KFGF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-NITL 146 (404)
Q Consensus 91 ~~~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~--------------~~-~i~~ 146 (404)
+... +.....+...|+.+|..+|++++. .+++++++|++++||+++.... .+ ...+
T Consensus 121 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i 200 (308)
T PRK11150 121 GGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKL 200 (308)
T ss_pred CcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEE
Confidence 5421 112244567899999999998875 5899999999999998653211 00 1112
Q ss_pred c-cCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 147 S-QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 147 ~-~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
. +.+...+.+||++|++++++.+++... +++|||++++. +++.|+++.+.+..|.
T Consensus 201 ~~g~~~~~r~~i~v~D~a~a~~~~~~~~~---~~~yni~~~~~---~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 201 FEGSENFKRDFVYVGDVAAVNLWFWENGV---SGIFNCGTGRA---ESFQAVADAVLAYHKK 256 (308)
T ss_pred ecCCCceeeeeeeHHHHHHHHHHHHhcCC---CCeEEcCCCCc---eeHHHHHHHHHHHhCC
Confidence 2 223345678999999999999887643 57999999875 8999999999998874
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=158.97 Aligned_cols=186 Identities=11% Similarity=-0.088 Sum_probs=141.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCC---EEEEeccCc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLG 88 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVk---rfI~vSS~g 88 (404)
.+++++.+|++|.+.+.+++++ +|+|||||+..... ..+......+|+.++.+|+++|++.|++ +|||+||.+
T Consensus 55 ~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~ 134 (343)
T TIGR01472 55 ARMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSE 134 (343)
T ss_pred cceeEEEeccCCHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHH
Confidence 4689999999999999999984 69999999975321 1122334567888999999999998864 899999998
Q ss_pred ccCCC-----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc--C-----------cc--cE
Q 015570 89 TNKFG-----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--E-----------TH--NI 144 (404)
Q Consensus 89 v~~~~-----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~--~-----------~~--~i 144 (404)
+++.. .+.....+...|+.+|..+|.+++. .|++++++|+..+||++.... . .+ ..
T Consensus 135 vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (343)
T TIGR01472 135 LYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEK 214 (343)
T ss_pred hhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCc
Confidence 87632 1222345677899999999999964 589999999998888743210 0 01 11
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
.+.+++...+++||++|++++++.++++.. +++|||++++. +++.|+++.+.+.+|.
T Consensus 215 ~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~---~~~yni~~g~~---~s~~e~~~~i~~~~g~ 271 (343)
T TIGR01472 215 LYLGNLDAKRDWGHAKDYVEAMWLMLQQDK---PDDYVIATGET---HSVREFVEVSFEYIGK 271 (343)
T ss_pred eeeCCCccccCceeHHHHHHHHHHHHhcCC---CccEEecCCCc---eeHHHHHHHHHHHcCC
Confidence 233445556789999999999999997653 46899999875 8999999999988884
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-17 Score=155.01 Aligned_cols=167 Identities=26% Similarity=0.234 Sum_probs=135.7
Q ss_pred CeEEEEcCCCCHhhHHHHhCCC--CEEEEcCcCCC--CCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 17 MLELVECDLEKRVQIEPALGNA--SVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gv--DvVI~~ag~~~--~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
+++++.+|+.|.+.+.+++++. |+|||+++... ....+....++.|+.++.+|+++|++.+++||||+||.++++.
T Consensus 43 ~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~ 122 (236)
T PF01370_consen 43 NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGD 122 (236)
T ss_dssp TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTS
T ss_pred eEEEEEeeccccccccccccccCceEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8899999999999999999866 99999999752 1123445667889999999999999999999999999888665
Q ss_pred CC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCC---CCcc-----------CcccEEEccC
Q 015570 93 GF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPT---DAYK-----------ETHNITLSQE 149 (404)
Q Consensus 93 ~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~---~~~~-----------~~~~i~~~~~ 149 (404)
.. +.....+...|+.+|+..|++++. .++++++||++.+||+. .... ....+.+.+.
T Consensus 123 ~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (236)
T PF01370_consen 123 PDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGD 202 (236)
T ss_dssp SSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEEST
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCC
Confidence 41 122345677899999999999975 58999999999999988 1111 1123666667
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEE
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVI 184 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~ 184 (404)
+...++++|++|+|++++.+++++. ..+++|||+
T Consensus 203 ~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~yNig 236 (236)
T PF01370_consen 203 GSQVRDFIHVDDLAEAIVAALENPK-AAGGIYNIG 236 (236)
T ss_dssp SSCEEEEEEHHHHHHHHHHHHHHSC-TTTEEEEES
T ss_pred CCCccceEEHHHHHHHHHHHHhCCC-CCCCEEEeC
Confidence 7777899999999999999999988 679999984
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=156.29 Aligned_cols=185 Identities=21% Similarity=0.144 Sum_probs=140.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC-C
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-F 94 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~-~ 94 (404)
.+++++.+|+.|.+++.++++++|+|||+++.......++...+++|+.++.+|++++++.+++|||++||.++++.. .
T Consensus 43 ~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~ 122 (328)
T TIGR03466 43 LDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGD 122 (328)
T ss_pred CCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCC
Confidence 378999999999999999999999999999865433344566788999999999999999999999999998776531 1
Q ss_pred -----chhhc---ccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-cc---------cEEEccCCcc
Q 015570 95 -----PAAIL---NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-TH---------NITLSQEDTL 152 (404)
Q Consensus 95 -----~~~~~---~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-~~---------~i~~~~~~~~ 152 (404)
+.... .....|+.+|..+|++++. .|++++++|++.+||++..... .. .+.... ..
T Consensus 123 ~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 200 (328)
T TIGR03466 123 GTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV--DT 200 (328)
T ss_pred CCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee--CC
Confidence 11111 1245799999999999875 5899999999999998643111 00 111111 11
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+||++|+|++++.++++.. .++.|++.+ +. +++.|+++.+.+.+|.+
T Consensus 201 ~~~~i~v~D~a~a~~~~~~~~~--~~~~~~~~~-~~---~s~~e~~~~i~~~~g~~ 250 (328)
T TIGR03466 201 GLNLVHVDDVAEGHLLALERGR--IGERYILGG-EN---LTLKQILDKLAEITGRP 250 (328)
T ss_pred CcceEEHHHHHHHHHHHHhCCC--CCceEEecC-CC---cCHHHHHHHHHHHhCCC
Confidence 2358999999999999998744 467887754 43 99999999999998854
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.9e-17 Score=163.48 Aligned_cols=174 Identities=15% Similarity=0.129 Sum_probs=129.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC-
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF- 94 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~- 94 (404)
.+++++.+|+.|.+.+. ...++|+|||+++. +..++++|+++|++.|++||||+||.++++...
T Consensus 110 ~~v~~v~~D~~d~~~~~-~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~ 174 (378)
T PLN00016 110 AGVKTVWGDPADVKSKV-AGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDE 174 (378)
T ss_pred cCceEEEecHHHHHhhh-ccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCC
Confidence 46899999998733322 23589999999763 145789999999999999999999998876421
Q ss_pred -chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc----------CcccEEEccCCccccCcccHHHHH
Q 015570 95 -PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK----------ETHNITLSQEDTLFGGQVSNLQVA 163 (404)
Q Consensus 95 -~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~----------~~~~i~~~~~~~~~~~~Is~~DVA 163 (404)
+.........+. +|..+|+++++.+++|++|||+++||+.+... ....+.+.+.+...+.+||++|+|
T Consensus 175 ~p~~E~~~~~p~~-sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva 253 (378)
T PLN00016 175 PPHVEGDAVKPKA-GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLA 253 (378)
T ss_pred CCCCCCCcCCCcc-hHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHH
Confidence 111111111222 79999999999999999999999999854321 112234444455556799999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 164 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 164 ~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
++++.++.++. ..+++|||++++. +++.|+++.+.+.+|.+.
T Consensus 254 ~ai~~~l~~~~-~~~~~yni~~~~~---~s~~el~~~i~~~~g~~~ 295 (378)
T PLN00016 254 SMFALVVGNPK-AAGQIFNIVSDRA---VTFDGMAKACAKAAGFPE 295 (378)
T ss_pred HHHHHHhcCcc-ccCCEEEecCCCc---cCHHHHHHHHHHHhCCCC
Confidence 99999998865 3469999999875 899999999999888654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=157.75 Aligned_cols=190 Identities=14% Similarity=0.049 Sum_probs=142.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++.+|+.|.+.+..+++ ++|+||||++.... ...++...++.|+.++.+|+++|++.++++|||+||.++++
T Consensus 58 ~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (352)
T PLN02240 58 DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYG 137 (352)
T ss_pred ccceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 468999999999999998886 78999999986532 12244456789999999999999999999999999987764
Q ss_pred CC-----CchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCC---------cc-C-----------
Q 015570 92 FG-----FPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDA---------YK-E----------- 140 (404)
Q Consensus 92 ~~-----~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~---------~~-~----------- 140 (404)
.. .+.....+...|+.+|..+|++++. .++.++++|++.+||.... .. .
T Consensus 138 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 217 (352)
T PLN02240 138 QPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVG 217 (352)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhC
Confidence 32 1222345567899999999999863 4688999999999885310 00 0
Q ss_pred -cccEEEcc------CCccccCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 141 -THNITLSQ------EDTLFGGQVSNLQVAELLACMAKNR---SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 141 -~~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~---~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+.+.+ ++...+.+|+++|+|++++.++++. ....+++|||++++. +++.|+++.+.+.+|.+
T Consensus 218 ~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~---~s~~el~~~i~~~~g~~ 292 (352)
T PLN02240 218 RRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKG---TSVLEMVAAFEKASGKK 292 (352)
T ss_pred CCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCc---EeHHHHHHHHHHHhCCC
Confidence 00122222 3344567899999999998888642 223468999998885 89999999999988843
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.72 E-value=9e-17 Score=165.38 Aligned_cols=180 Identities=13% Similarity=0.045 Sum_probs=136.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|+.+. ++.++|+|||||+.... ...++...+++|+.++.+|+++|++.|+ +|||+||..+++..
T Consensus 167 ~~~~~i~~D~~~~-----~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~ 240 (442)
T PLN02206 167 PNFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP 240 (442)
T ss_pred CceEEEECCccCh-----hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCC
Confidence 5788899998764 35689999999986532 2234556778999999999999999997 89999999887532
Q ss_pred C-----ch-----hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-------------CcccEEE
Q 015570 94 F-----PA-----AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------ETHNITL 146 (404)
Q Consensus 94 ~-----~~-----~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-------------~~~~i~~ 146 (404)
. +. ........|+.+|..+|++++. .+++++++|++.+||++.... ....+.+
T Consensus 241 ~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i 320 (442)
T PLN02206 241 LQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV 320 (442)
T ss_pred CCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEE
Confidence 1 11 0122346799999999998864 689999999999999863211 1123444
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
.+++...+++||++|+|++++.++++.. +++|||++++. +++.|+++.+.+..|.
T Consensus 321 ~g~G~~~rdfi~V~Dva~ai~~a~e~~~---~g~yNIgs~~~---~sl~Elae~i~~~~g~ 375 (442)
T PLN02206 321 YGDGKQTRSFQFVSDLVEGLMRLMEGEH---VGPFNLGNPGE---FTMLELAKVVQETIDP 375 (442)
T ss_pred eCCCCEEEeEEeHHHHHHHHHHHHhcCC---CceEEEcCCCc---eeHHHHHHHHHHHhCC
Confidence 4555556789999999999999987543 46999999875 8999999999888873
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.5e-16 Score=171.05 Aligned_cols=188 Identities=15% Similarity=0.106 Sum_probs=140.0
Q ss_pred CCeEEEEcCCCCH------hhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 16 EMLELVECDLEKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 16 ~gveiV~gDl~d~------~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
.+++++.+|++|. +.+..+ .++|+||||++..... .+....+++|+.++.+|+++|++.++++|||+||.++
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v 128 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAV 128 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEecccc
Confidence 5799999999984 345444 8999999999975432 2334567899999999999999999999999999987
Q ss_pred cCCCCc----hh---hcccchHHHHHHHHHHHHHHH-CCCCEEEEEcCccCCCCCCccCc---------------c----
Q 015570 90 NKFGFP----AA---ILNLFWGVLLWKRKAEEALIA-SGLPYTIVRPGGMERPTDAYKET---------------H---- 142 (404)
Q Consensus 90 ~~~~~~----~~---~~~~~~~y~~sK~~~E~~l~~-~gl~~tIlRpg~~~G~~~~~~~~---------------~---- 142 (404)
++.... .. .......|+.+|+++|+++++ .|+++++|||+++||+....... .
T Consensus 129 ~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 208 (657)
T PRK07201 129 AGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPS 208 (657)
T ss_pred ccCccCccccccchhhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCc
Confidence 643211 10 122345799999999999985 78999999999999964321000 0
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
.+.+...+.....+|+++||++++..++.... ..+++|||++++. +++.|+++.+.+.+|.+.
T Consensus 209 ~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~-~~g~~~ni~~~~~---~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 209 WLPMVGPDGGRTNIVPVDYVADALDHLMHKDG-RDGQTFHLTDPKP---QRVGDIYNAFARAAGAPP 271 (657)
T ss_pred ccccccCCCCeeeeeeHHHHHHHHHHHhcCcC-CCCCEEEeCCCCC---CcHHHHHHHHHHHhCCCc
Confidence 00111112223468999999999999987654 4578999999875 999999999999888655
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.7e-16 Score=152.06 Aligned_cols=167 Identities=13% Similarity=0.042 Sum_probs=127.8
Q ss_pred CCCeEEEEcCCCCHhhHHHHh------CC-CCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccC
Q 015570 15 VEMLELVECDLEKRVQIEPAL------GN-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 87 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL------~g-vDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~ 87 (404)
..+++++.+|+.|.+.|..+| .| +|+||||++.... ......+++++|+++||+|||++|+.
T Consensus 38 ~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~-----------~~~~~~~~i~aa~~~gv~~~V~~Ss~ 106 (285)
T TIGR03649 38 GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPD-----------LAPPMIKFIDFARSKGVRRFVLLSAS 106 (285)
T ss_pred CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCC-----------hhHHHHHHHHHHHHcCCCEEEEeecc
Confidence 357889999999999999999 67 9999999875321 13467899999999999999999997
Q ss_pred cccCCCCchhhcccchHHHHHHHHHHHHHHHC-CCCEEEEEcCccCCCCCCc------cCcccEEEccCCccccCcccHH
Q 015570 88 GTNKFGFPAAILNLFWGVLLWKRKAEEALIAS-GLPYTIVRPGGMERPTDAY------KETHNITLSQEDTLFGGQVSNL 160 (404)
Q Consensus 88 gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~~-gl~~tIlRpg~~~G~~~~~------~~~~~i~~~~~~~~~~~~Is~~ 160 (404)
+++... ..+..+|+++++. |++||+|||++||+..... ...+.+.. ..+.....+|+++
T Consensus 107 ~~~~~~-------------~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~v~~~ 172 (285)
T TIGR03649 107 IIEKGG-------------PAMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYS-ATGDGKIPFVSAD 172 (285)
T ss_pred ccCCCC-------------chHHHHHHHHHhccCCCEEEEeccHHhhhhcccccccccccCCeEEe-cCCCCccCcccHH
Confidence 764321 1244567888885 9999999999998643111 11122222 2334456799999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCCC
Q 015570 161 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKE 210 (404)
Q Consensus 161 DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~ 210 (404)
|||++++.++.++. ..+++|++++++. +++.|+++.+.+.+|++..
T Consensus 173 Dva~~~~~~l~~~~-~~~~~~~l~g~~~---~s~~eia~~l~~~~g~~v~ 218 (285)
T TIGR03649 173 DIARVAYRALTDKV-APNTDYVVLGPEL---LTYDDVAEILSRVLGRKIT 218 (285)
T ss_pred HHHHHHHHHhcCCC-cCCCeEEeeCCcc---CCHHHHHHHHHHHhCCceE
Confidence 99999999998865 4578999999875 9999999999999997543
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.3e-16 Score=154.77 Aligned_cols=190 Identities=13% Similarity=0.056 Sum_probs=140.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++.+|+.|.+.+..++. ++|+|||+++..... ..+....+++|+.++.+|+++|++.|+++||++||.++++
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg 129 (338)
T PRK10675 50 KHPTFVEGDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYG 129 (338)
T ss_pred CCceEEEccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhC
Confidence 357889999999999998886 699999999865321 2233456789999999999999999999999999987764
Q ss_pred CCC-----chhhc-ccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCC--------Cc--cC----------
Q 015570 92 FGF-----PAAIL-NLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTD--------AY--KE---------- 140 (404)
Q Consensus 92 ~~~-----~~~~~-~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~--------~~--~~---------- 140 (404)
... +.... .+...|+.+|..+|++++. .++.++++|++.+||+.. .. ..
T Consensus 130 ~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~ 209 (338)
T PRK10675 130 DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAV 209 (338)
T ss_pred CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHh
Confidence 321 11122 4567899999999999974 378999999988887521 00 00
Q ss_pred --cccEEEcc------CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 141 --THNITLSQ------EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 141 --~~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+.+.+ ++...+++||++|+|++++.+++.. ....+++|||++++. +++.|+++.+.+..|..
T Consensus 210 ~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 283 (338)
T PRK10675 210 GRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVG---SSVLDVVNAFSKACGKP 283 (338)
T ss_pred cCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCc---eeHHHHHHHHHHHhCCC
Confidence 00122221 2334467999999999999998752 213368999998875 89999999999988854
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.9e-16 Score=150.61 Aligned_cols=189 Identities=19% Similarity=0.124 Sum_probs=141.6
Q ss_pred CeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 17 MLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
+++++.+|+.+.+.+.+++. ++|+||||+|..... ..+....++.|+.++.+|+++|++.++++||++||.++++.
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 48 RVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGE 127 (328)
T ss_pred ceEEEECCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCC
Confidence 57899999999999999886 799999999975321 22344567889999999999999999999999999877542
Q ss_pred C-----CchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCcc---------------------Cc
Q 015570 93 G-----FPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYK---------------------ET 141 (404)
Q Consensus 93 ~-----~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~---------------------~~ 141 (404)
. .+.....+...|+.+|..+|.+++. .++++++||++.+||+..... ..
T Consensus 128 ~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (328)
T TIGR01179 128 PSSIPISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKR 207 (328)
T ss_pred CCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCC
Confidence 2 1122334567899999999998874 689999999999999743210 00
Q ss_pred ccEEEcc------CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 142 HNITLSQ------EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 142 ~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
..+.+.+ .+.....+||++|+|++++.++... ....+++||+++++. +++.|+++.+.+..|.+
T Consensus 208 ~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~---~s~~ei~~~~~~~~g~~ 278 (328)
T TIGR01179 208 DKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQG---FSVLEVIEAFKKVSGVD 278 (328)
T ss_pred CCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCc---ccHHHHHHHHHHHhCCC
Confidence 1111111 1223346899999999999998753 223578999998875 89999999999988854
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.7e-17 Score=151.48 Aligned_cols=178 Identities=25% Similarity=0.246 Sum_probs=130.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.+.|.++|+|+|+||++.+... ........+|++||+++||+|||+ |+++......
T Consensus 43 ~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~----------~~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~~~- 110 (233)
T PF05368_consen 43 LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH----------PSELEQQKNLIDAAKAAGVKHFVP-SSFGADYDES- 110 (233)
T ss_dssp TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC----------CCHHHHHHHHHHHHHHHT-SEEEE-SEESSGTTTT-
T ss_pred ccceEeecccCCHHHHHHHHcCCceEEeecCcch----------hhhhhhhhhHHHhhhccccceEEE-EEeccccccc-
Confidence 6889999999999999999999999999998653 133678899999999999999996 5444432211
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCC-------ccCcc-cEEEccCCccccCc-ccHHHHHHHH
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA-------YKETH-NITLSQEDTLFGGQ-VSNLQVAELL 166 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~-------~~~~~-~i~~~~~~~~~~~~-Is~~DVA~ai 166 (404)
....+...+...|..+|++|++.+++||+||+|+|+..... ....+ .+.+...+.....+ ++.+|||+++
T Consensus 111 -~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~v 189 (233)
T PF05368_consen 111 -SGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAV 189 (233)
T ss_dssp -TTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHH
T ss_pred -ccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHH
Confidence 01122345667899999999999999999999998753211 11112 34555444432334 5999999999
Q ss_pred HHHHhCCCCC-CCcEEEEEcCCCCCCccHHHHHHHcccccCCCCC
Q 015570 167 ACMAKNRSLS-YCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKE 210 (404)
Q Consensus 167 ~~~l~~~~~~-~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~ 210 (404)
+.++.++..+ .++.+.+.++. +++.|+++.+.+.+|+.-+
T Consensus 190 a~il~~p~~~~~~~~~~~~~~~----~t~~eia~~~s~~~G~~v~ 230 (233)
T PF05368_consen 190 AAILLDPEKHNNGKTIFLAGET----LTYNEIAAILSKVLGKKVK 230 (233)
T ss_dssp HHHHHSGGGTTEEEEEEEGGGE----EEHHHHHHHHHHHHTSEEE
T ss_pred HHHHcChHHhcCCEEEEeCCCC----CCHHHHHHHHHHHHCCccE
Confidence 9999998765 57888887764 8999999999999997543
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.9e-16 Score=151.70 Aligned_cols=168 Identities=14% Similarity=0.085 Sum_probs=122.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcccCCC-
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG- 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv~~~~- 93 (404)
.+++++.+|++|.+.+..++.++|+|||+++.......++...+++|+.++.+|+++|.+. +++|||++||.++....
T Consensus 57 ~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~ 136 (297)
T PLN02583 57 ERLKVFDVDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRD 136 (297)
T ss_pred CceEEEEecCCCHHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheeccc
Confidence 4789999999999999999999999999886543222234567899999999999999886 68999999998653211
Q ss_pred ---------Cchhhcccc------hHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC---cccEEEccCCc
Q 015570 94 ---------FPAAILNLF------WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---THNITLSQEDT 151 (404)
Q Consensus 94 ---------~~~~~~~~~------~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~---~~~i~~~~~~~ 151 (404)
++....... ..|+.+|..+|++++. .|+++++|||+++||++..... .+...... .
T Consensus 137 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~--~ 214 (297)
T PLN02583 137 DNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYE--N 214 (297)
T ss_pred ccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCc--c
Confidence 000011111 1599999999999853 6999999999999998653211 11111111 1
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
....+|+++|||++++.+++++.. ++.|.+.+++
T Consensus 215 ~~~~~v~V~Dva~a~~~al~~~~~--~~r~~~~~~~ 248 (297)
T PLN02583 215 GVLVTVDVNFLVDAHIRAFEDVSS--YGRYLCFNHI 248 (297)
T ss_pred cCcceEEHHHHHHHHHHHhcCccc--CCcEEEecCC
Confidence 224689999999999999987653 3478888886
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-16 Score=155.81 Aligned_cols=188 Identities=13% Similarity=0.035 Sum_probs=140.2
Q ss_pred CeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccC
Q 015570 17 MLELVECDLEKRVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNK 91 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~ 91 (404)
+++++.+|++|.+.+.+++++ +|+|||+++.... ...++...+++|+.++.+|+++|++.+ +++||++||..+++
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg 132 (349)
T TIGR02622 53 KIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYR 132 (349)
T ss_pred CceEEEccCCCHHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhC
Confidence 577899999999999999884 6999999985422 223445667899999999999999877 88999999987765
Q ss_pred CC------CchhhcccchHHHHHHHHHHHHHHH-----------CCCCEEEEEcCccCCCCCCcc------------Ccc
Q 015570 92 FG------FPAAILNLFWGVLLWKRKAEEALIA-----------SGLPYTIVRPGGMERPTDAYK------------ETH 142 (404)
Q Consensus 92 ~~------~~~~~~~~~~~y~~sK~~~E~~l~~-----------~gl~~tIlRpg~~~G~~~~~~------------~~~ 142 (404)
.. .+.....+.+.|+.+|..+|.+++. .|+++++||++.+||+++... ...
T Consensus 133 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~ 212 (349)
T TIGR02622 133 NDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNK 212 (349)
T ss_pred CCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCC
Confidence 32 1112345567899999999999864 289999999999999864211 112
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNR---SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~---~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+.+. ++...+.+||++|++++++.+++.. ....+++|||+++.. ...++.++++.+.+..+
T Consensus 213 ~~~~~-~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~-~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 213 IVIIR-NPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRAS-DNARVVELVVDALEFWW 277 (349)
T ss_pred CeEEC-CCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcc-cCcCHHHHHHHHHHHhc
Confidence 23343 3455678999999999999887642 112257999987421 13999999999988765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.9e-16 Score=150.66 Aligned_cols=187 Identities=17% Similarity=0.120 Sum_probs=141.0
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCC-cchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKF 92 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~-~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~ 92 (404)
..+++++.+||.|.+++..+++|||+|||+|........+.+ ...+.++.|+.|++++|++.+ |+||||.||..+-..
T Consensus 56 ~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~ 135 (327)
T KOG1502|consen 56 KERLKLFKADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRY 135 (327)
T ss_pred cccceEEeccccccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhcc
Confidence 356999999999999999999999999999999866544433 577899999999999999988 999999999876321
Q ss_pred C----Cchh------hc------ccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCccc----EE-Ec
Q 015570 93 G----FPAA------IL------NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN----IT-LS 147 (404)
Q Consensus 93 ~----~~~~------~~------~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~~~----i~-~~ 147 (404)
. .... +. .--+-|..+|..+|+..++ .|++.++|.|+.++|+......... +. +.
T Consensus 136 ~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~ 215 (327)
T KOG1502|consen 136 NGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIK 215 (327)
T ss_pred CCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHh
Confidence 1 1100 00 0113699999999998874 7899999999999998765421110 00 11
Q ss_pred c----CCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 148 Q----EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 148 ~----~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
+ .......+||++|||++.+.+++.+.. +++|.+.++. ..+.|++..+......
T Consensus 216 G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~----~~~~ei~~~l~~~~P~ 273 (327)
T KOG1502|consen 216 GLAETYPNFWLAFVDVRDVALAHVLALEKPSA--KGRYICVGEV----VSIKEIADILRELFPD 273 (327)
T ss_pred cccccCCCCceeeEeHHHHHHHHHHHHcCccc--CceEEEecCc----ccHHHHHHHHHHhCCC
Confidence 1 111222489999999999999999885 5788888887 5688888887776653
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.7e-16 Score=155.33 Aligned_cols=187 Identities=14% Similarity=0.086 Sum_probs=135.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCC--CCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccCc--cc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLG--TN 90 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~--~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~g--v~ 90 (404)
.+++++.+|++|.+.+.++++++|+|||+++...... ..+....++|++++.+|+++|.+. +|+||||+||.. ++
T Consensus 107 ~~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vy 186 (367)
T PLN02686 107 DGIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVW 186 (367)
T ss_pred CceEEEEcCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcc
Confidence 3688999999999999999999999999998753211 112345678999999999999986 899999999963 33
Q ss_pred CC----C-----Cch------hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCc--------cc
Q 015570 91 KF----G-----FPA------AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET--------HN 143 (404)
Q Consensus 91 ~~----~-----~~~------~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~--------~~ 143 (404)
+. . .+. ....+...|+.+|..+|++++. .|+++++|||+++||++...... +.
T Consensus 187 g~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~ 266 (367)
T PLN02686 187 RQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGA 266 (367)
T ss_pred cccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCC
Confidence 21 0 000 0112345799999999999863 58999999999999986532110 11
Q ss_pred EEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 144 ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 144 i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+.+.+++ ...+++++||+++++.+++.. ....+++| |++++. +++.|+++.|.+.+|.+
T Consensus 267 ~~~~g~g--~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~---~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 267 QEMLADG--LLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHV---VSREDEAEELARQIGLP 326 (367)
T ss_pred CccCCCC--CcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCC---ccHHHHHHHHHHHcCCC
Confidence 1121111 235899999999999999752 11235678 777664 89999999999999854
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.4e-16 Score=153.84 Aligned_cols=186 Identities=12% Similarity=-0.072 Sum_probs=142.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCC-----EEEEecc
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-----HFIMVSS 86 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVk-----rfI~vSS 86 (404)
.+++++.+|++|.+.+..+++ ++|+|||||+..... ..++...+++|+.++.+|+++|++.+++ +|||+||
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss 139 (340)
T PLN02653 60 ARMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS 139 (340)
T ss_pred CceEEEEecCCCHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc
Confidence 468999999999999999887 469999999975321 2234455688999999999999998875 8999999
Q ss_pred CcccCCC----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc--------------CcccE
Q 015570 87 LGTNKFG----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--------------ETHNI 144 (404)
Q Consensus 87 ~gv~~~~----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~--------------~~~~i 144 (404)
.++++.. .+.....+...|+.+|..+|++++. .++.++.+|+...||++.... ....+
T Consensus 140 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~ 219 (340)
T PLN02653 140 SEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQK 219 (340)
T ss_pred HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCC
Confidence 8776642 1222445677899999999999864 578888889988888743211 00112
Q ss_pred E-EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 145 T-LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 145 ~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
. +.+++...+++||++|+|++++.++++.. +++|||++++. +++.|+++.+.+..|.
T Consensus 220 ~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~---~~~yni~~g~~---~s~~e~~~~i~~~~g~ 277 (340)
T PLN02653 220 KLFLGNLDASRDWGFAGDYVEAMWLMLQQEK---PDDYVVATEES---HTVEEFLEEAFGYVGL 277 (340)
T ss_pred ceEeCCCcceecceeHHHHHHHHHHHHhcCC---CCcEEecCCCc---eeHHHHHHHHHHHcCC
Confidence 2 22444556789999999999999998643 57899999885 8999999999998884
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.1e-16 Score=162.54 Aligned_cols=189 Identities=12% Similarity=0.017 Sum_probs=141.0
Q ss_pred CCeEEEEcCCC-------CHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccC
Q 015570 16 EMLELVECDLE-------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSL 87 (404)
Q Consensus 16 ~gveiV~gDl~-------d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~ 87 (404)
.+++++.||+. +.+.+..+++++|+|||||+..... .+.....++|+.++.+|+++|++. ++++|||+||.
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~ 162 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTA 162 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee
Confidence 68999999998 4455777888999999999986532 345567889999999999999985 78999999999
Q ss_pred cccCCCCc----------h--------h--------------------------------------hcccchHHHHHHHH
Q 015570 88 GTNKFGFP----------A--------A--------------------------------------ILNLFWGVLLWKRK 111 (404)
Q Consensus 88 gv~~~~~~----------~--------~--------------------------------------~~~~~~~y~~sK~~ 111 (404)
++++.... . + .....+.|+.+|..
T Consensus 163 ~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~ 242 (491)
T PLN02996 163 YVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAM 242 (491)
T ss_pred EEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHH
Confidence 88643210 0 0 00122469999999
Q ss_pred HHHHHHH--CCCCEEEEEcCccCCCCCCccC-----------------cccE-EEccCCccccCcccHHHHHHHHHHHHh
Q 015570 112 AEEALIA--SGLPYTIVRPGGMERPTDAYKE-----------------THNI-TLSQEDTLFGGQVSNLQVAELLACMAK 171 (404)
Q Consensus 112 ~E~~l~~--~gl~~tIlRpg~~~G~~~~~~~-----------------~~~i-~~~~~~~~~~~~Is~~DVA~ai~~~l~ 171 (404)
+|+++++ .||+++|+||+++||+...... .+.+ .+.+++....++|+++||+++++.++.
T Consensus 243 aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~ 322 (491)
T PLN02996 243 GEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMA 322 (491)
T ss_pred HHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHH
Confidence 9999986 5899999999999997543211 1112 233445556789999999999998887
Q ss_pred CC--CCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 172 NR--SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 172 ~~--~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.. ....+++|||+++.. ..++|.++++.+.+..+
T Consensus 323 ~~~~~~~~~~vYNi~s~~~-~~~s~~ei~~~~~~~~~ 358 (491)
T PLN02996 323 AHAGGQGSEIIYHVGSSLK-NPVKFSNLHDFAYRYFS 358 (491)
T ss_pred HhhccCCCCcEEEecCCCC-CcccHHHHHHHHHHHhh
Confidence 53 112367999998821 23899999998887665
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.1e-16 Score=152.08 Aligned_cols=174 Identities=12% Similarity=0.117 Sum_probs=133.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|++|.+.+.++++++|+|||+||.... ...+....+++|+.++.+|+++|.+.++++||++||....
T Consensus 53 ~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~--- 129 (324)
T TIGR03589 53 PCLRFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA--- 129 (324)
T ss_pred CcEEEEEccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC---
Confidence 46899999999999999999999999999997532 1233445678999999999999999999999999996432
Q ss_pred CchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-------cc--cEEEccCCccccCcc
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-------TH--NITLSQEDTLFGGQV 157 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-------~~--~i~~~~~~~~~~~~I 157 (404)
.+...|+.+|..+|++++. .|+.+++||+|++||++..... .+ .+.+. ++...+.|+
T Consensus 130 ------~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i 202 (324)
T TIGR03589 130 ------NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWI 202 (324)
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeE
Confidence 2235799999999998853 5899999999999997542110 11 13333 334445789
Q ss_pred cHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 158 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 158 s~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
+++|++++++.++++.. .+++|+ ..+. .+++.|+++.+....
T Consensus 203 ~v~D~a~a~~~al~~~~--~~~~~~-~~~~---~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 203 TLEQGVNFVLKSLERML--GGEIFV-PKIP---SMKITDLAEAMAPEC 244 (324)
T ss_pred EHHHHHHHHHHHHhhCC--CCCEEc-cCCC---cEEHHHHHHHHHhhC
Confidence 99999999999998643 356774 4443 389999999998753
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=151.94 Aligned_cols=185 Identities=16% Similarity=0.111 Sum_probs=130.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC----CCCCCcch-----hhHHHHHHHHHHHHHhCC-CCEEEEec
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKE----VFDITGPY-----RIDFQATKNLVDAATIAK-VNHFIMVS 85 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~----~~d~~~~~-----~vnv~~~~~Ll~Aa~~ag-VkrfI~vS 85 (404)
.+++++.+|+.|.+.+.+++.++|+|||+|+..... ..+...++ +.|+.++.+|+++|.+.+ +++||++|
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~S 137 (353)
T PLN02896 58 DRLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTS 137 (353)
T ss_pred CeEEEEECCCCCHHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEe
Confidence 468999999999999999999999999999975422 12333333 334689999999998874 89999999
Q ss_pred cCcccCCCC---------chh---hc-------ccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCc-
Q 015570 86 SLGTNKFGF---------PAA---IL-------NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET- 141 (404)
Q Consensus 86 S~gv~~~~~---------~~~---~~-------~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~- 141 (404)
|..+++... .+. .. .....|+.+|..+|++++. .|++++++|++.+||++......
T Consensus 138 S~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~ 217 (353)
T PLN02896 138 SISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPS 217 (353)
T ss_pred chhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCc
Confidence 987764210 011 00 1223799999999998864 68999999999999986431100
Q ss_pred ----------ccEE-Ec--cCCcc---ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 142 ----------HNIT-LS--QEDTL---FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 142 ----------~~i~-~~--~~~~~---~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
+... +. .+... .+.+||++|+|++++.+++.... +.+|++. +.. +++.|+++.+.+..
T Consensus 218 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~--~~~~~~~-~~~---~s~~el~~~i~~~~ 291 (353)
T PLN02896 218 SIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA--EGRYICC-VDS---YDMSELINHLSKEY 291 (353)
T ss_pred hHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc--CccEEec-CCC---CCHHHHHHHHHHhC
Confidence 0000 00 00000 13689999999999999986542 3467554 432 89999999999887
Q ss_pred C
Q 015570 206 A 206 (404)
Q Consensus 206 g 206 (404)
+
T Consensus 292 ~ 292 (353)
T PLN02896 292 P 292 (353)
T ss_pred C
Confidence 6
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-17 Score=159.77 Aligned_cols=182 Identities=18% Similarity=0.093 Sum_probs=124.7
Q ss_pred EcCCCCHhhHHHHhC--CCCEEEEcCcCCC--CCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC----
Q 015570 22 ECDLEKRVQIEPALG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---- 93 (404)
Q Consensus 22 ~gDl~d~~~l~~aL~--gvDvVI~~ag~~~--~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~---- 93 (404)
.+|++|.+.+.+.+. +.|+|||||+... .+..++...+++|+.++.+|+++|.+.|+ +|||+||..+....
T Consensus 34 ~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~ 112 (286)
T PF04321_consen 34 DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGP 112 (286)
T ss_dssp CS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSS
T ss_pred hcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccc
Confidence 568999999998886 6899999999863 33456667789999999999999999997 89999999884322
Q ss_pred -CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc---------CcccEEEccCCccccCcccHHHHH
Q 015570 94 -FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVA 163 (404)
Q Consensus 94 -~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~---------~~~~i~~~~~~~~~~~~Is~~DVA 163 (404)
.+.+..++...|+++|.++|+.+++..-.++|||++++||...... ....+.+. ...++..++++|+|
T Consensus 113 y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~dlA 190 (286)
T PF04321_consen 113 YTEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLF--DDQYRSPTYVDDLA 190 (286)
T ss_dssp B-TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEE--SSCEE--EEHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEee--CCceeCCEEHHHHH
Confidence 3345677888999999999999998555999999999999833211 11222332 34456789999999
Q ss_pred HHHHHHHhCCCC--CCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 164 ELLACMAKNRSL--SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 164 ~ai~~~l~~~~~--~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+++..++++... ...++||+++.+. +++.|++..|.+..|...
T Consensus 191 ~~i~~l~~~~~~~~~~~Giyh~~~~~~---~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 191 RVILELIEKNLSGASPWGIYHLSGPER---VSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp HHHHHHHHHHHH-GGG-EEEE---BS----EEHHHHHHHHHHHHTHCT
T ss_pred HHHHHHHHhcccccccceeEEEecCcc---cCHHHHHHHHHHHhCCCC
Confidence 999999987541 2358999999986 999999999999888555
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.5e-15 Score=163.85 Aligned_cols=158 Identities=16% Similarity=0.162 Sum_probs=125.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.+.+..+++++|+|||||+.... .+++|+.++.+++++|++.|+++|||+||.+
T Consensus 40 ~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~-------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------- 105 (854)
T PRK05865 40 SSADFIAADIRDATAVESAMTGADVVAHCAWVRGR-------NDHINIDGTANVLKAMAETGTGRIVFTSSGH------- 105 (854)
T ss_pred cCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc-------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------
Confidence 46899999999999999999999999999986421 4689999999999999999999999999853
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCc--ccEEE--ccCCccccCcccHHHHHHHHHHHHh
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET--HNITL--SQEDTLFGGQVSNLQVAELLACMAK 171 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~--~~i~~--~~~~~~~~~~Is~~DVA~ai~~~l~ 171 (404)
|..+|+++++.|++++++|++++||++...... ..+.+ .+......++||++|+|++++.+++
T Consensus 106 -------------K~aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~ 172 (854)
T PRK05865 106 -------------QPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALL 172 (854)
T ss_pred -------------HHHHHHHHHHcCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence 788999999899999999999999985321101 11111 1222233468999999999999987
Q ss_pred CCCCCCCcEEEEEcCCCCCCccHHHHHHHcccc
Q 015570 172 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204 (404)
Q Consensus 172 ~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~ 204 (404)
+.. ..+++|||++++. +++.|+++.+...
T Consensus 173 ~~~-~~ggvyNIgsg~~---~Si~EIae~l~~~ 201 (854)
T PRK05865 173 DTV-IDSGPVNLAAPGE---LTFRRIAAALGRP 201 (854)
T ss_pred CCC-cCCCeEEEECCCc---ccHHHHHHHHhhh
Confidence 554 3467999999885 8899998887653
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.5e-15 Score=145.38 Aligned_cols=188 Identities=17% Similarity=0.145 Sum_probs=136.3
Q ss_pred CCeEEEEcCCCCH------hhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 16 EMLELVECDLEKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 16 ~gveiV~gDl~d~------~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
.+++++.+|+.+. +.+..+..++|+||||++..... ......++.|+.++.+|+++|.+.++++|||+||.++
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~-~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v 139 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWV-YPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISV 139 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccC-CcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccc
Confidence 5899999998753 45667778999999999976431 2233456789999999999999999999999999988
Q ss_pred cCCCCc-----hh-----hcccchHHHHHHHHHHHHHHH---CCCCEEEEEcCccCCCCCC--ccCcc----------cE
Q 015570 90 NKFGFP-----AA-----ILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDA--YKETH----------NI 144 (404)
Q Consensus 90 ~~~~~~-----~~-----~~~~~~~y~~sK~~~E~~l~~---~gl~~tIlRpg~~~G~~~~--~~~~~----------~i 144 (404)
+..... .. ......+|+.+|+.+|++++. .|++++++|+|.++|+... +.... ..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 219 (367)
T TIGR01746 140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLAL 219 (367)
T ss_pred cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHh
Confidence 653211 00 112245799999999999875 4999999999999986221 11000 00
Q ss_pred E-EccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 145 T-LSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 145 ~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
. +.........+++++|++++++.++.+... ..+++||+++++. +++.|+++.+.+ .|.+
T Consensus 220 ~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~---~s~~e~~~~i~~-~g~~ 281 (367)
T TIGR01746 220 GAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEP---VSLDEFLEWLER-AGYN 281 (367)
T ss_pred CCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCC---CCHHHHHHHHHH-cCCC
Confidence 0 111111234589999999999999877652 1278999999875 899999999888 6654
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.8e-15 Score=141.42 Aligned_cols=189 Identities=14% Similarity=0.104 Sum_probs=150.7
Q ss_pred CCCCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCC--CCCCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccC
Q 015570 13 QPVEMLELVECDLEKRVQIEPALG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSL 87 (404)
Q Consensus 13 ~~~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~--~~~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~ 87 (404)
...++.+++++|+.+...+...+. ..|.|||.|+... ..-.+.....+.|+.++..|+++++.. ++++|||+||.
T Consensus 54 ~n~p~ykfv~~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTd 133 (331)
T KOG0747|consen 54 RNSPNYKFVEGDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTD 133 (331)
T ss_pred ccCCCceEeeccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccc
Confidence 346899999999999988887774 7999999998752 223345566778999999999999998 79999999999
Q ss_pred cccCCCCc------hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEE
Q 015570 88 GTNKFGFP------AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITL 146 (404)
Q Consensus 88 gv~~~~~~------~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~ 146 (404)
.+|+.... ...+++..+|+++|+++|..++. .|++++++|.+++||++.... ......+
T Consensus 134 eVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i 213 (331)
T KOG0747|consen 134 EVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPI 213 (331)
T ss_pred ceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcce
Confidence 99876532 23567888999999999999985 689999999999999976432 1234566
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+++...+.+++++|+++++..+++... .|++|||+.+.. ++..|++..|.+...
T Consensus 214 ~g~g~~~rs~l~veD~~ea~~~v~~Kg~--~geIYNIgtd~e---~~~~~l~k~i~eli~ 268 (331)
T KOG0747|consen 214 HGDGLQTRSYLYVEDVSEAFKAVLEKGE--LGEIYNIGTDDE---MRVIDLAKDICELFE 268 (331)
T ss_pred ecCcccceeeEeHHHHHHHHHHHHhcCC--ccceeeccCcch---hhHHHHHHHHHHHHH
Confidence 6677777889999999999999998843 599999999986 566666666655443
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.2e-15 Score=145.16 Aligned_cols=192 Identities=17% Similarity=0.072 Sum_probs=138.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCC--CCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~--~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
..+++.+.+|+.|.-.+.++++++ .||||++.. .....+....+++|+.|+.+++++|.+.||++|||+||.++...
T Consensus 54 ~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~ 132 (361)
T KOG1430|consen 54 SGRVTVILGDLLDANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFG 132 (361)
T ss_pred CCceeEEecchhhhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeC
Confidence 578999999999999999999999 777777654 22234577788999999999999999999999999999988332
Q ss_pred CCc------h--hhcccchHHHHHHHHHHHHHHHC----CCCEEEEEcCccCCCCCCccC--------ccc-EEEccCCc
Q 015570 93 GFP------A--AILNLFWGVLLWKRKAEEALIAS----GLPYTIVRPGGMERPTDAYKE--------THN-ITLSQEDT 151 (404)
Q Consensus 93 ~~~------~--~~~~~~~~y~~sK~~~E~~l~~~----gl~~tIlRpg~~~G~~~~~~~--------~~~-i~~~~~~~ 151 (404)
+.. . ........|..+|..+|+++++. +|..++||+..+||+++.... .+. +...+...
T Consensus 133 g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~ 212 (361)
T KOG1430|consen 133 GEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGE 212 (361)
T ss_pred CeecccCCCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccc
Confidence 211 1 12334468999999999999973 388999999999999886421 122 22223334
Q ss_pred cccCcccHHHHHHHHHH---HHh-CCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCCC
Q 015570 152 LFGGQVSNLQVAELLAC---MAK-NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKE 210 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~---~l~-~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~ 210 (404)
.+.++++.+.|+-+.+. .+. ......|+.|.|.+++. ..+|..+. .+....|-...
T Consensus 213 ~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p--~~~~~~~~-~l~~~lg~~~~ 272 (361)
T KOG1430|consen 213 NLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTP--VRFFDFLS-PLVKALGYCLP 272 (361)
T ss_pred cccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCc--chhhHHHH-HHHHhcCCCCC
Confidence 55567777666555432 223 44556799999999986 34444444 77777775444
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.2e-14 Score=141.68 Aligned_cols=252 Identities=30% Similarity=0.325 Sum_probs=176.5
Q ss_pred CCCeEEEEcCCCCHhhHHHHh-----CCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 15 VEMLELVECDLEKRVQIEPAL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL-----~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
+.++..+..|.....++..-+ .+..+|+.|+|...... |....++++..|++|+++||+.+||+|||++|+++.
T Consensus 126 d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~~~ggrp~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~ 204 (411)
T KOG1203|consen 126 DLGLQNVEADVVTAIDILKKLVEAVPKGVVIVIKGAGGRPEEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGG 204 (411)
T ss_pred ccccceeeeccccccchhhhhhhhccccceeEEecccCCCCcc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecC
Confidence 456777777766554433222 24557777777654332 445567899999999999999999999999999998
Q ss_pred cCCCCchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEc--cCCccccCcccHHHHHHHHH
Q 015570 90 NKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLS--QEDTLFGGQVSNLQVAELLA 167 (404)
Q Consensus 90 ~~~~~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~--~~~~~~~~~Is~~DVA~ai~ 167 (404)
.....+......++.+..+|+.+|++++++|++|+|||++.++............... .......+.|++.|||++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~ 284 (411)
T KOG1203|consen 205 TKFNQPPNILLLNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVA 284 (411)
T ss_pred cccCCCchhhhhhhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHH
Confidence 7766555444447788999999999999999999999999997643322211111111 11111113799999999999
Q ss_pred HHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC--CCCCCCCCCCCCCCccCCCCCCCCCCCCCcccccccC
Q 015570 168 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP--KESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKV 245 (404)
Q Consensus 168 ~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (404)
.++.+....+.++.+++.....+...+.++++.+....-.. ...+.+.-....... +...+.++...+.+....-..
T Consensus 285 ~all~~~~~~~k~~~~v~~~~gpg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~ 363 (411)
T KOG1203|consen 285 KALLNEAATFKKVVELVLKPEGPGRPYKVLLELFPLDESSQTYPVFAARPTEAGFCRV-VPFSAFRPANKEDPPLDPGLS 363 (411)
T ss_pred HHHhhhhhccceeEEeecCCCCCCccHHHHHhhcccccccccccceeccccccceeEe-cccccccccccccCccccccc
Confidence 99999987777899999888888888888888877654322 222222211114444 555555555566666666667
Q ss_pred CCCCCCCccCCCCCCCCCCCCCCC
Q 015570 246 TDPLSPYTSYEDLKPPTSPTPTAP 269 (404)
Q Consensus 246 ~~p~~~~~~~~dlkpp~sp~P~~~ 269 (404)
.|| +.|..|.+.+..........
T Consensus 364 ~~~-~~~~~~~~d~~~~~~~~~~t 386 (411)
T KOG1203|consen 364 ERP-ARFSSLIQDPVDGLAGEQQT 386 (411)
T ss_pred cCc-chhhhhccCCCccccccccc
Confidence 889 99999999998888777443
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.1e-14 Score=137.16 Aligned_cols=175 Identities=17% Similarity=0.083 Sum_probs=119.4
Q ss_pred hhHHHHhCCCCEEEEcCcCCCCC-C---CCCCcchhhHHHHHHHHHHHHHhCCCC--EEEEeccCcccCCCC-----chh
Q 015570 29 VQIEPALGNASVVICCIGASEKE-V---FDITGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNKFGF-----PAA 97 (404)
Q Consensus 29 ~~l~~aL~gvDvVI~~ag~~~~~-~---~d~~~~~~vnv~~~~~Ll~Aa~~agVk--rfI~vSS~gv~~~~~-----~~~ 97 (404)
..+..++.++|+||||++..... . .+...+++.|+.++.+|+++|++.+++ +||+.|+.++++... +..
T Consensus 49 ~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~ 128 (292)
T TIGR01777 49 LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEED 128 (292)
T ss_pred cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCccc
Confidence 45567788999999999864321 0 112345678999999999999999874 566667665544221 111
Q ss_pred hcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCccCCCCCCccCc----ccE---EEccCCccccCcccHHHHHHHHH
Q 015570 98 ILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKET----HNI---TLSQEDTLFGGQVSNLQVAELLA 167 (404)
Q Consensus 98 ~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~~G~~~~~~~~----~~i---~~~~~~~~~~~~Is~~DVA~ai~ 167 (404)
.......|...+.+.|+.++ +.++++++||++++||+.+..... ... ...+++..++++|+++|||++++
T Consensus 129 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~ 208 (292)
T TIGR01777 129 SPAGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLIL 208 (292)
T ss_pred CCCCCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHH
Confidence 11222234555666666554 368999999999999985421100 000 01123455568999999999999
Q ss_pred HHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 168 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 168 ~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+++++.. +++||+++++. +++.|+++.+.+..|.+
T Consensus 209 ~~l~~~~~--~g~~~~~~~~~---~s~~di~~~i~~~~g~~ 244 (292)
T TIGR01777 209 FALENASI--SGPVNATAPEP---VRNKEFAKALARALHRP 244 (292)
T ss_pred HHhcCccc--CCceEecCCCc---cCHHHHHHHHHHHhCCC
Confidence 99987553 56999998875 99999999999988853
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.5e-14 Score=133.26 Aligned_cols=179 Identities=21% Similarity=0.197 Sum_probs=142.7
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 14 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
...++-+...|+.|.++|+++++...+|||++|--. ....-.+.++|+.+...|.+.|+++||.|||++|.++++-..
T Consensus 107 dLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd~--eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s 184 (391)
T KOG2865|consen 107 DLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRDY--ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKS 184 (391)
T ss_pred cccceeeeccCCCCHHHHHHHHHhCcEEEEeecccc--ccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccC
Confidence 346788899999999999999999999999999632 122345678999999999999999999999999999865222
Q ss_pred CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccC--------cccEEEccCC-ccccCcccHHHHHH
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQED-TLFGGQVSNLQVAE 164 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~--------~~~i~~~~~~-~~~~~~Is~~DVA~ 164 (404)
-.-|.++|.++|..+++.=-+.|||||..|||..+...+ .+.+.++..+ ......|++.|||.
T Consensus 185 --------~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa 256 (391)
T KOG2865|consen 185 --------PSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAA 256 (391)
T ss_pred --------hHHHHHhhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHH
Confidence 245889999999999987667999999999997665422 2223343333 23345799999999
Q ss_pred HHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 165 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 165 ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
+|+.++.++. +.|++|+++++.. +.+.||++-+.....
T Consensus 257 ~IvnAvkDp~-s~Gktye~vGP~~---yql~eLvd~my~~~~ 294 (391)
T KOG2865|consen 257 AIVNAVKDPD-SMGKTYEFVGPDR---YQLSELVDIMYDMAR 294 (391)
T ss_pred HHHHhccCcc-ccCceeeecCCch---hhHHHHHHHHHHHHh
Confidence 9999999996 7899999999996 888888777666554
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.6e-14 Score=131.37 Aligned_cols=181 Identities=14% Similarity=0.061 Sum_probs=146.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCC--CCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~--~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
+++++++.-|+.. ..+.++|.|||+|+... +...++-.....|+.++.+++..|++.+ +||++.||..+|+.
T Consensus 74 ~~~fel~~hdv~~-----pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgd 147 (350)
T KOG1429|consen 74 HPNFELIRHDVVE-----PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGD 147 (350)
T ss_pred CcceeEEEeechh-----HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCC
Confidence 5677777777655 47889999999998763 3345667778899999999999999998 69999999999876
Q ss_pred CCchh----------hcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-------------cccEE
Q 015570 93 GFPAA----------ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------THNIT 145 (404)
Q Consensus 93 ~~~~~----------~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-------------~~~i~ 145 (404)
..... ..++...|...|+.+|.++.. .|+++.|.|+.+.||+++.+.. ...+.
T Consensus 148 p~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~eplt 227 (350)
T KOG1429|consen 148 PLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLT 227 (350)
T ss_pred cccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeE
Confidence 42211 234556899999999999974 7899999999999999887642 34578
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
+++++..-+.|++++|+.+.++.+++++. ..-+||++++. .+|.|+++.+.+..|.
T Consensus 228 v~g~G~qtRSF~yvsD~Vegll~Lm~s~~---~~pvNiGnp~e---~Tm~elAemv~~~~~~ 283 (350)
T KOG1429|consen 228 VYGDGKQTRSFQYVSDLVEGLLRLMESDY---RGPVNIGNPGE---FTMLELAEMVKELIGP 283 (350)
T ss_pred EEcCCcceEEEEeHHHHHHHHHHHhcCCC---cCCcccCCccc---eeHHHHHHHHHHHcCC
Confidence 88888888889999999999999999877 34499999985 8888888888887753
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-13 Score=129.67 Aligned_cols=191 Identities=15% Similarity=0.080 Sum_probs=147.9
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCC--CCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 15 VEMLELVECDLEKRVQIEPALG--NASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~--~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
..+++++++|+.|...|++.|+ +.|.|+|.|+.. ...+.++..+...|+.++.+|+++|+++++++|||.||..+|
T Consensus 53 ~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvY 132 (343)
T KOG1371|consen 53 GKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVY 132 (343)
T ss_pred CCceEEEEeccCCHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeee
Confidence 4789999999999999999987 789999999875 344678888999999999999999999999999999999998
Q ss_pred CCCCc-----hhhcc-cchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCC--CCCCccC---------c--------
Q 015570 91 KFGFP-----AAILN-LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMER--PTDAYKE---------T-------- 141 (404)
Q Consensus 91 ~~~~~-----~~~~~-~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G--~~~~~~~---------~-------- 141 (404)
+.... ..... +...|+.+|..+|+++.. .++.+++||.+..+| +.....+ .
T Consensus 133 G~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vai 212 (343)
T KOG1371|consen 133 GLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAI 212 (343)
T ss_pred cCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhh
Confidence 76522 22233 678899999999999986 468899999999887 2221100 0
Q ss_pred ---ccEEEcc------CCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 142 ---HNITLSQ------EDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 142 ---~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
..+.+.+ ++...++.|++.|.|+....++..... ...++||++.+.. .++.+|+..+...+|..
T Consensus 213 gr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g---~~V~~lv~a~~k~~g~~ 286 (343)
T KOG1371|consen 213 GRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKG---SSVLELVTAFEKALGVK 286 (343)
T ss_pred cccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCC---ccHHHHHHHHHHHhcCC
Confidence 0011111 234556789999999999999987653 3345999999986 67888888888877743
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.6e-13 Score=132.78 Aligned_cols=181 Identities=13% Similarity=0.004 Sum_probs=125.6
Q ss_pred eEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC-----CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 18 LELVECDLEKRVQIEPALG--NASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~-----~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
+.+..+|+.|.+.+...+. ++|+||||||.... ...++..++++|+.++.+|+++|++.|+++ |++||..++
T Consensus 36 V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~~vy 114 (298)
T PLN02778 36 FHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATGCIF 114 (298)
T ss_pred EEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecceEe
Confidence 3335678888888887776 78999999997632 123456678899999999999999999975 455555443
Q ss_pred CCC-----------Cchhhcc-cchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEE-E-ccCC--cccc
Q 015570 91 KFG-----------FPAAILN-LFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNIT-L-SQED--TLFG 154 (404)
Q Consensus 91 ~~~-----------~~~~~~~-~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~-~-~~~~--~~~~ 154 (404)
... .+.+... +...|+.+|+.+|++++... .+.+||+.+.++.+...... .+. + .... ....
T Consensus 115 ~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~-fi~~~~~~~~~~~~~~ 192 (298)
T PLN02778 115 EYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRN-FITKITRYEKVVNIPN 192 (298)
T ss_pred CCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHH-HHHHHHcCCCeeEcCC
Confidence 211 1122222 33689999999999998753 56789998877653211000 000 0 0000 1113
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 155 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
++++++|++++++.++.+.. +++|||++++. +++.|+++.+.+..|.
T Consensus 193 s~~yv~D~v~al~~~l~~~~---~g~yNigs~~~---iS~~el~~~i~~~~~~ 239 (298)
T PLN02778 193 SMTILDELLPISIEMAKRNL---TGIYNFTNPGV---VSHNEILEMYRDYIDP 239 (298)
T ss_pred CCEEHHHHHHHHHHHHhCCC---CCeEEeCCCCc---ccHHHHHHHHHHHhCC
Confidence 58999999999999987543 46999988875 8999999999998885
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.6e-13 Score=127.51 Aligned_cols=119 Identities=24% Similarity=0.236 Sum_probs=77.9
Q ss_pred CCCeEEEEcCCCCH------hhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCc
Q 015570 15 VEMLELVECDLEKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 88 (404)
Q Consensus 15 ~~gveiV~gDl~d~------~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~g 88 (404)
..+++++.|||.++ +.+....+.+|+|||||+..... .+....++.|+.++++|++.|.+.+.++|+|+||..
T Consensus 59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~ 137 (249)
T PF07993_consen 59 LSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAY 137 (249)
T ss_dssp TTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGG
T ss_pred hccEEEEeccccccccCCChHHhhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhccCcceEEecccc
Confidence 58999999999885 45666668999999999987653 355668899999999999999987777999999954
Q ss_pred ccCCCCch--------------hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCC
Q 015570 89 TNKFGFPA--------------AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERP 134 (404)
Q Consensus 89 v~~~~~~~--------------~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~ 134 (404)
+....... .......+|..+|+.+|+++++ .|++++|+|||.++|.
T Consensus 138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~ 201 (249)
T PF07993_consen 138 VAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGD 201 (249)
T ss_dssp GTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-S
T ss_pred ccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccccc
Confidence 53322110 0223456999999999999985 3999999999999983
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-12 Score=140.20 Aligned_cols=159 Identities=15% Similarity=0.108 Sum_probs=116.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.. +.+++.++|+||||++.... ....+|+.++.||+++|++.|+ +|||+||.+.. ..
T Consensus 40 ~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G~--~~- 108 (699)
T PRK12320 40 PRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTS------APGGVGITGLAHVANAAARAGA-RLLFVSQAAGR--PE- 108 (699)
T ss_pred CCceEEEccCCCHH-HHHHhcCCCEEEEcCccCcc------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCCCC--Cc-
Confidence 57899999999985 77888999999999986421 1235899999999999999998 79999986421 10
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccE----EEccCCccccCcccHHHHHHHHHHHHh
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNI----TLSQEDTLFGGQVSNLQVAELLACMAK 171 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i----~~~~~~~~~~~~Is~~DVA~ai~~~l~ 171 (404)
.| ..+|+++...+++++|+|++++||++........+ .....+. ...+||++|++++++.+++
T Consensus 109 --------~~----~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~-pI~vIyVdDvv~alv~al~ 175 (699)
T PRK12320 109 --------LY----RQAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSAR-PIRVLHLDDLVRFLVLALN 175 (699)
T ss_pred --------cc----cHHHHHHHhcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCC-ceEEEEHHHHHHHHHHHHh
Confidence 01 25788888888999999999999985432111111 0000111 1124799999999999997
Q ss_pred CCCCCCCcEEEEEcCCCCCCccHHHHHHHcccc
Q 015570 172 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204 (404)
Q Consensus 172 ~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~ 204 (404)
... +++|||++++. +++.|+++.+...
T Consensus 176 ~~~---~GiyNIG~~~~---~Si~el~~~i~~~ 202 (699)
T PRK12320 176 TDR---NGVVDLATPDT---TNVVTAWRLLRSV 202 (699)
T ss_pred CCC---CCEEEEeCCCe---eEHHHHHHHHHHh
Confidence 643 35999999986 8999988877654
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.3e-13 Score=130.33 Aligned_cols=173 Identities=14% Similarity=0.091 Sum_probs=117.3
Q ss_pred EEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCC--CCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 19 ELVECDLEKRVQIEPALG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~--~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+.||++|.+.+..+++ ++|+|||+|+.-. ....++....+.|+.|++|++++|.+.+|++||++||--+.+
T Consensus 57 ~~vigDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~--- 133 (293)
T PF02719_consen 57 VPVIGDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN--- 133 (293)
T ss_dssp E--CTSCCHHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS---
T ss_pred CceeecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC---
Confidence 346899999999999999 9999999999752 223466677899999999999999999999999999976543
Q ss_pred chhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc--------cCcccEEEccCCccccCcccH
Q 015570 95 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--------KETHNITLSQEDTLFGGQVSN 159 (404)
Q Consensus 95 ~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~--------~~~~~i~~~~~~~~~~~~Is~ 159 (404)
+.+.||.+|+.+|+++.. .+..+++||+|+|.|-++-- ...+.+.+...+ ..+-++++
T Consensus 134 ------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~-mtRffmti 206 (293)
T PF02719_consen 134 ------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPD-MTRFFMTI 206 (293)
T ss_dssp --------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT--EEEEE-H
T ss_pred ------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCC-cEEEEecH
Confidence 336799999999999985 24679999999999854321 123445555433 33457999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 160 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 160 ~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
++.++++..++.... ++++|.+--++. +.+.|+++.+.+..|
T Consensus 207 ~EAv~Lvl~a~~~~~--~geifvl~mg~~---v~I~dlA~~~i~~~g 248 (293)
T PF02719_consen 207 EEAVQLVLQAAALAK--GGEIFVLDMGEP---VKILDLAEAMIELSG 248 (293)
T ss_dssp HHHHHHHHHHHHH----TTEEEEE---TC---EECCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhCC--CCcEEEecCCCC---cCHHHHHHHHHhhcc
Confidence 999999999887655 377888887776 555555555555444
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.6e-12 Score=135.07 Aligned_cols=189 Identities=13% Similarity=0.073 Sum_probs=132.6
Q ss_pred CCCeEEEEcCCCCH------hhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccC
Q 015570 15 VEMLELVECDLEKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSL 87 (404)
Q Consensus 15 ~~gveiV~gDl~d~------~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~ 87 (404)
..+++++.||+++. +.+..+.+++|+|||+|+..... .+.....++|+.++.+|+++|++. ++++|||+||.
T Consensus 191 ~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa 269 (605)
T PLN02503 191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA 269 (605)
T ss_pred cccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc
Confidence 46899999999986 34556667899999999987532 345566889999999999999886 57899999999
Q ss_pred cccCCCC------ch-----------------------h------------h----------------------cccchH
Q 015570 88 GTNKFGF------PA-----------------------A------------I----------------------LNLFWG 104 (404)
Q Consensus 88 gv~~~~~------~~-----------------------~------------~----------------------~~~~~~ 104 (404)
++++... .. + . ....+.
T Consensus 270 yVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNt 349 (605)
T PLN02503 270 YVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDT 349 (605)
T ss_pred eeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCCh
Confidence 8754321 00 0 0 011257
Q ss_pred HHHHHHHHHHHHHH--CCCCEEEEEcCccC----------CCCCCcc-------CcccEE-EccCCccccCcccHHHHHH
Q 015570 105 VLLWKRKAEEALIA--SGLPYTIVRPGGME----------RPTDAYK-------ETHNIT-LSQEDTLFGGQVSNLQVAE 164 (404)
Q Consensus 105 y~~sK~~~E~~l~~--~gl~~tIlRpg~~~----------G~~~~~~-------~~~~i~-~~~~~~~~~~~Is~~DVA~ 164 (404)
|..+|..+|+++++ .+|+++||||+.|. ++++... ..+.++ +.++.....+.|.+|.|+.
T Consensus 350 Yt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvn 429 (605)
T PLN02503 350 YVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVN 429 (605)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHH
Confidence 99999999999986 58999999999993 3321110 112222 2233344456899999999
Q ss_pred HHHHHHhC-CC--CCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 165 LLACMAKN-RS--LSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 165 ai~~~l~~-~~--~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
+++.++.. .. ....++||++++. ...++|.++++.+.+..
T Consensus 430 a~i~a~a~~~~~~~~~~~vYn~ts~~-~nP~t~~~~~~~~~~~~ 472 (605)
T PLN02503 430 ATLAAMAKHGGAAKPEINVYQIASSV-VNPLVFQDLARLLYEHY 472 (605)
T ss_pred HHHHHHHhhhcccCCCCCEEEeCCCC-CCCeEHHHHHHHHHHHH
Confidence 98887432 11 1236899999873 23488999988877643
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.5e-12 Score=131.01 Aligned_cols=177 Identities=16% Similarity=0.136 Sum_probs=141.7
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCC--CCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 15 VEMLELVECDLEKRVQIEPALGN--ASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~--~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
+.++..+.||++|.+.+..++++ +|+|||+|+.- ...+.++....+.|+.|++|+++||.+.||++||++||--+-
T Consensus 301 ~~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV 380 (588)
T COG1086 301 ELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV 380 (588)
T ss_pred CcceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc
Confidence 57889999999999999999998 99999999974 445677888899999999999999999999999999997553
Q ss_pred CCCCchhhcccchHHHHHHHHHHHHHHH-----C--CCCEEEEEcCccCCCCCCc--------cCcccEEEccCCccccC
Q 015570 91 KFGFPAAILNLFWGVLLWKRKAEEALIA-----S--GLPYTIVRPGGMERPTDAY--------KETHNITLSQEDTLFGG 155 (404)
Q Consensus 91 ~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~--gl~~tIlRpg~~~G~~~~~--------~~~~~i~~~~~~~~~~~ 155 (404)
++.+-||.+|+.+|.++.. . +-.++++|+|++.|-++.- ...+.+.+-.. .+-+-
T Consensus 381 ---------~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp-~mtRy 450 (588)
T COG1086 381 ---------NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDP-DMTRF 450 (588)
T ss_pred ---------CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCC-CceeE
Confidence 3346799999999999975 2 3679999999999964421 11233333322 23345
Q ss_pred cccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 156 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 156 ~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
|+++.+.+++++.+..... +|.+|-+--++. ..+.|+++++....|
T Consensus 451 fMTI~EAv~LVlqA~a~~~--gGeifvldMGep---vkI~dLAk~mi~l~g 496 (588)
T COG1086 451 FMTIPEAVQLVLQAGAIAK--GGEIFVLDMGEP---VKIIDLAKAMIELAG 496 (588)
T ss_pred EEEHHHHHHHHHHHHhhcC--CCcEEEEcCCCC---eEHHHHHHHHHHHhC
Confidence 8999999999999887654 488998887765 888888888877776
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-12 Score=146.10 Aligned_cols=184 Identities=21% Similarity=0.150 Sum_probs=131.5
Q ss_pred CCeEEEEcCCCC------HhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 16 EMLELVECDLEK------RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 16 ~gveiV~gDl~d------~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
.+++++.+|+.+ .+.+..++.++|+||||++..... .........|+.++.+++++|.+.++++|+|+||.++
T Consensus 1034 ~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v 1112 (1389)
T TIGR03443 1034 SRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWV-YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSA 1112 (1389)
T ss_pred cceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCc-cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeee
Confidence 479999999974 455677778999999999976432 2223344679999999999999999999999999877
Q ss_pred cCCC----------------Cchh------hcccchHHHHHHHHHHHHHHH---CCCCEEEEEcCccCCCCCCcc-Cc--
Q 015570 90 NKFG----------------FPAA------ILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYK-ET-- 141 (404)
Q Consensus 90 ~~~~----------------~~~~------~~~~~~~y~~sK~~~E~~l~~---~gl~~tIlRpg~~~G~~~~~~-~~-- 141 (404)
++.. .... ......+|+.+|+.+|+++.. .|++++++|+|.+||+..... ..
T Consensus 1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~ 1192 (1389)
T TIGR03443 1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDD 1192 (1389)
T ss_pred cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchh
Confidence 5321 0000 111235799999999999875 689999999999999743211 00
Q ss_pred -------c--cEEEccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCCCCCCccHHHHHHHccc
Q 015570 142 -------H--NITLSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPS 203 (404)
Q Consensus 142 -------~--~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~~~~~~si~ell~~i~~ 203 (404)
. .+...........+++++||+++++.++.+... ..+.+||+.++.. +++.++++.+.+
T Consensus 1193 ~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~l~~ 1261 (1389)
T TIGR03443 1193 FLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR---IRFNDFLGTLKT 1261 (1389)
T ss_pred HHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC---CcHHHHHHHHHH
Confidence 0 000111112235689999999999999876542 2356899998864 888998888865
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.3e-12 Score=137.26 Aligned_cols=181 Identities=12% Similarity=-0.035 Sum_probs=126.1
Q ss_pred eEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC-----CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 18 LELVECDLEKRVQIEPALG--NASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~-----~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
+.+..+|++|.+.+...+. ++|+|||||+.... +..++...+++|+.++.+|+++|++.|++ +|++||.+++
T Consensus 407 v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~ 485 (668)
T PLN02260 407 YEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIF 485 (668)
T ss_pred EEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEccccee
Confidence 3345688999999888876 79999999997632 12356677899999999999999999995 6677776654
Q ss_pred CCC-----------Cchhhccc-chHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCC---ccCcccEEEccCCccccC
Q 015570 91 KFG-----------FPAAILNL-FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA---YKETHNITLSQEDTLFGG 155 (404)
Q Consensus 91 ~~~-----------~~~~~~~~-~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~---~~~~~~i~~~~~~~~~~~ 155 (404)
... .+.+...+ ...|+.+|+.+|++++.. -++.++|..++|+.... ......+.....-....+
T Consensus 486 ~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~ 564 (668)
T PLN02260 486 EYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNS 564 (668)
T ss_pred cCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccCCC
Confidence 311 11222233 478999999999999875 36788899888863211 000111111110011234
Q ss_pred cccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 156 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 156 ~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+.++|+..+++.+++... +++|||+++.. +++.|+++.|.+..+
T Consensus 565 ~~~~~~~~~~~~~l~~~~~---~giyni~~~~~---~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 565 MTVLDELLPISIEMAKRNL---RGIWNFTNPGV---VSHNEILEMYKDYID 609 (668)
T ss_pred ceehhhHHHHHHHHHHhCC---CceEEecCCCc---CcHHHHHHHHHHhcC
Confidence 5778888888888886422 58999999875 999999999988775
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.9e-12 Score=116.30 Aligned_cols=166 Identities=14% Similarity=0.132 Sum_probs=116.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|+.|.+++.+++. ++|+|||++|...... .++...+++|+.+..+|++++ ++.++
T Consensus 56 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 135 (249)
T PRK12825 56 RRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRG 135 (249)
T ss_pred CceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 568999999999998887764 6799999999653221 122344677888888888876 56678
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
++||++||.+.+... .....|+.+|..++.+++ ..|+.+++||||+++++.................
T Consensus 136 ~~~i~~SS~~~~~~~------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~ 209 (249)
T PRK12825 136 GRIVNISSVAGLPGW------PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAET 209 (249)
T ss_pred CEEEEECccccCCCC------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccC
Confidence 899999998765332 224579999988876664 2689999999999998754321100000000012
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+++.+|+++++..++.+.. ...+++|+|.++.
T Consensus 210 ~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~ 246 (249)
T PRK12825 210 PLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGV 246 (249)
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCE
Confidence 23458999999999999997643 3458999999874
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.5e-11 Score=118.18 Aligned_cols=178 Identities=15% Similarity=0.095 Sum_probs=123.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|++|.+++.+++. ++|+||||+|...... .++...+++|+.++.+|++++ ++.+.
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 127 (276)
T PRK06482 48 DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG 127 (276)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 478999999999988877653 5899999999764321 112334668999999999987 56677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCcc---CCCCCCccCcccEEEcc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGM---ERPTDAYKETHNITLSQ 148 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~---~G~~~~~~~~~~i~~~~ 148 (404)
++||++||.+..... .....|+.+|+.+|.+++. .|+++++||||.+ ||.+.... ..+....
T Consensus 128 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~--~~~~~~~ 199 (276)
T PRK06482 128 GRIVQVSSEGGQIAY------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRG--APLDAYD 199 (276)
T ss_pred CEEEEEcCcccccCC------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccccccc--CCCcccc
Confidence 899999997653221 2346799999999977752 5899999999998 44322110 0000000
Q ss_pred -----------CCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 149 -----------EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 149 -----------~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
....+.-+.+.+|++++++.++.+... +..|++++++. .++.++++++.+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~~~--~~~~~~g~~~~---~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 200 DTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQTPA--PRRLTLGSDAY---ASIRAALSERLAALE 263 (276)
T ss_pred chhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCCCC--CeEEecChHHH---HHHHHHHHHHHHHHH
Confidence 000111135889999999999976542 56799998875 788888887777654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.9e-11 Score=110.76 Aligned_cols=167 Identities=14% Similarity=0.111 Sum_probs=115.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|+.|.+++.++++ .+|+|||++|...... .++...+..|+.+..++++++ ++.+.
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 134 (251)
T PRK12826 55 GKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG 134 (251)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 358999999999998887764 6899999998764211 122334667888888888776 45567
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc-EEEccCC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQED 150 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~-i~~~~~~ 150 (404)
++||++||.+..... ......|+.+|..++.+++. .|+.+++||||+++++......... .......
T Consensus 135 ~~ii~~ss~~~~~~~-----~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~ 209 (251)
T PRK12826 135 GRIVLTSSVAGPRVG-----YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAA 209 (251)
T ss_pred cEEEEEechHhhccC-----CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhc
Confidence 899999998765211 12235799999888877753 5899999999999987543211111 0011111
Q ss_pred ccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~ 187 (404)
..+..+++.+|+|++++.++..... ..+++|++.++.
T Consensus 210 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 210 IPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 2223578999999999998876442 357899988765
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.6e-11 Score=113.59 Aligned_cols=185 Identities=15% Similarity=0.113 Sum_probs=127.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-------CCCCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-------~~~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|.... ...++...+++|+.+..++++++.+ .+
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (276)
T PRK05875 58 GAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG 137 (276)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 468899999999988887765 78999999986421 1112334467788888888876654 34
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~~ 148 (404)
..+||++||....... ..+..|+.+|..+|.+++. .++.+++||||++.++....... ... ....
T Consensus 138 ~g~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~ 211 (276)
T PRK05875 138 GGSFVGISSIAASNTH------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYR 211 (276)
T ss_pred CcEEEEEechhhcCCC------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHH
Confidence 4589999998764432 2246799999999998873 57999999999987653221100 000 0001
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCC-CCccHHHHHHHcccccC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA-PLTPMEELLAKIPSQRA 206 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~-~~~si~ell~~i~~~~g 206 (404)
.......+++.+|||++++.++.+.. ...++++++.++... ...++.|+++.+.+..|
T Consensus 212 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 212 ACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred cCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence 11122346789999999999998754 224789999888752 22489999998886544
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=110.08 Aligned_cols=170 Identities=16% Similarity=0.100 Sum_probs=117.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEecc
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSS 86 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS 86 (404)
.++.++.+|++|.+++.++++ ++|+|||++|.......++...+++|+.+..++++++... ...+||++||
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 56 GRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 357889999999998877664 6899999998754334456677889999999999999864 2348999999
Q ss_pred CcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE--EccCCccccCcc
Q 015570 87 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQV 157 (404)
Q Consensus 87 ~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~--~~~~~~~~~~~I 157 (404)
.+........ ....+..|+.+|..+|.+++. .|+.+++|+++.+.++........... +.......+.++
T Consensus 136 ~~~~~~~~~~-~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (248)
T PRK07806 136 HQAHFIPTVK-TMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLY 214 (248)
T ss_pred chhhcCcccc-CCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccC
Confidence 6543111100 112256899999999998874 578999999988765421100000000 000011123578
Q ss_pred cHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 158 SNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 158 s~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
+++|||++++.++++.. ..+++|++.+++
T Consensus 215 ~~~dva~~~~~l~~~~~-~~g~~~~i~~~~ 243 (248)
T PRK07806 215 TVSEFAAEVARAVTAPV-PSGHIEYVGGAD 243 (248)
T ss_pred CHHHHHHHHHHHhhccc-cCccEEEecCcc
Confidence 99999999999998654 468899999886
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.3e-10 Score=109.58 Aligned_cols=166 Identities=14% Similarity=0.039 Sum_probs=110.5
Q ss_pred CCeEEEEcCCCCHhhHHHH-------hCCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a-------L~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|+.|.+++..+ +.+.|+|||++|...... .++...+..|+.+..++++++ ++.++
T Consensus 50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~ 129 (255)
T TIGR01963 50 GSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGW 129 (255)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 4688999999999865543 457899999998753211 112233457888877776665 56788
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-----cccEEE
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----THNITL 146 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-----~~~i~~ 146 (404)
++|||+||.+..... .....|..+|..++.+++. .++.+++||||+++++...... ......
T Consensus 130 ~~~v~~ss~~~~~~~------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~ 203 (255)
T TIGR01963 130 GRIINIASAHGLVAS------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPE 203 (255)
T ss_pred eEEEEEcchhhcCCC------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCc
Confidence 899999987654321 1235688999888877752 4899999999999986421100 000000
Q ss_pred -------ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 147 -------SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 147 -------~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.......+.+++.+|+|++++.++.+.. ...++.|++.++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 204 EQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGW 252 (255)
T ss_pred hHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence 0012223458999999999999997643 2346789888774
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.7e-11 Score=111.43 Aligned_cols=166 Identities=13% Similarity=0.044 Sum_probs=112.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHH----HHHHHHHH-HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQA----TKNLVDAA-TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~----~~~Ll~Aa-~~ag 77 (404)
.++.++.+|+.|.+.+.+++. ++|+||||+|...... .++...+.+|+.+ +.++++++ ++.+
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~ 135 (262)
T PRK13394 56 GKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR 135 (262)
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Confidence 357889999999988877654 4899999999753211 1123345678888 67777777 6778
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cc--ccE---
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET--HNI--- 144 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~--~~i--- 144 (404)
+++||++||.+..... .....|+.+|...+.+++. .++.+++||||+++++..... .. ...
T Consensus 136 ~~~iv~~ss~~~~~~~------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~ 209 (262)
T PRK13394 136 GGVVIYMGSVHSHEAS------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGIS 209 (262)
T ss_pred CcEEEEEcchhhcCCC------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCC
Confidence 8999999997654321 1235688999888877652 589999999999998642110 00 000
Q ss_pred ------EEccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCC
Q 015570 145 ------TLSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 187 (404)
Q Consensus 145 ------~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~ 187 (404)
.+..++...+.+++.+|++++++.++..... ..++.|++.++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 210 EEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 0111222345689999999999999976532 236778777663
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.1e-11 Score=105.11 Aligned_cols=152 Identities=18% Similarity=0.230 Sum_probs=114.0
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 14 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
....+..+..|+...+++...++|.|+.|||.|.+..... -+++++++.+....+.++|++.|+++|+.+||.|++...
T Consensus 60 t~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRgkaG-adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sS 138 (238)
T KOG4039|consen 60 TDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRGKAG-ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSS 138 (238)
T ss_pred ccceeeeEEechHHHHHHHhhhcCCceEEEeecccccccc-cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCccc
Confidence 3467888999999999999999999999999998865433 677889999999999999999999999999999997654
Q ss_pred CchhhcccchHHHHHHHHHHHHHHHCCCC-EEEEEcCccCCCCCCccCc---ccEEEccCCc--cccCcccHHHHHHHHH
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPGGMERPTDAYKET---HNITLSQEDT--LFGGQVSNLQVAELLA 167 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~~gl~-~tIlRpg~~~G~~~~~~~~---~~i~~~~~~~--~~~~~Is~~DVA~ai~ 167 (404)
. ..|.+.|.++|+.+.+.+++ ++|+|||.+.+.+.+.... +++....-.. ...-...+.-++.+|+
T Consensus 139 r--------FlY~k~KGEvE~~v~eL~F~~~~i~RPG~ll~~R~esr~geflg~~~~a~l~~~~~R~~s~pv~~~~~amv 210 (238)
T KOG4039|consen 139 R--------FLYMKMKGEVERDVIELDFKHIIILRPGPLLGERTESRQGEFLGNLTAALLRSRFQRLLSYPVYGDEVAMV 210 (238)
T ss_pred c--------eeeeeccchhhhhhhhccccEEEEecCcceecccccccccchhhheehhhhhhHHHhccCCchhhhhHhHh
Confidence 2 46999999999999998886 8899999999875543221 1111111010 1111245556677777
Q ss_pred HHHhCCC
Q 015570 168 CMAKNRS 174 (404)
Q Consensus 168 ~~l~~~~ 174 (404)
..+....
T Consensus 211 n~~~~~~ 217 (238)
T KOG4039|consen 211 NVLNTSG 217 (238)
T ss_pred hccccCC
Confidence 7665554
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.4e-11 Score=116.79 Aligned_cols=122 Identities=22% Similarity=0.230 Sum_probs=97.8
Q ss_pred CCCCeEEEEcCCCC------HhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccC
Q 015570 14 PVEMLELVECDLEK------RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 87 (404)
Q Consensus 14 ~~~gveiV~gDl~d------~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~ 87 (404)
..++++++.||+.. ...|.+..+.+|.|||+++...+ .......++.|+.|+..+++.|...+.|.|+|+||+
T Consensus 58 ~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~-v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsi 136 (382)
T COG3320 58 SADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNH-VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSI 136 (382)
T ss_pred hcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcc-cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeee
Confidence 45899999999974 35677777789999999998753 334456678999999999999999999999999999
Q ss_pred cccCCCCch--------------hhcccchHHHHHHHHHHHHHHH---CCCCEEEEEcCccCCCCC
Q 015570 88 GTNKFGFPA--------------AILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTD 136 (404)
Q Consensus 88 gv~~~~~~~--------------~~~~~~~~y~~sK~~~E~~l~~---~gl~~tIlRpg~~~G~~~ 136 (404)
++....... ......++|+++|+.+|.++++ .|++++|+|||.+.|...
T Consensus 137 sv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~ 202 (382)
T COG3320 137 SVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR 202 (382)
T ss_pred eeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence 884322111 1223467999999999999986 799999999999988643
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.3e-10 Score=98.37 Aligned_cols=159 Identities=18% Similarity=0.156 Sum_probs=115.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC---
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF--- 92 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~--- 92 (404)
.++.+++.|+.|.+.+.+.|.|.|+||...+.... +...........|++.++.+|+.|++.++..|.-..
T Consensus 41 ~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~------~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g 114 (211)
T COG2910 41 QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGAS------DNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG 114 (211)
T ss_pred ccceeecccccChhhhHhhhcCCceEEEeccCCCC------ChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC
Confidence 78899999999999999999999999999987621 112334556888999999999999999988765211
Q ss_pred CCchh-hcccchHHHHHHHHHH--HHHHH-CCCCEEEEEcCccCCCCCCccCcccEEEccCCccc----cCcccHHHHHH
Q 015570 93 GFPAA-ILNLFWGVLLWKRKAE--EALIA-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF----GGQVSNLQVAE 164 (404)
Q Consensus 93 ~~~~~-~~~~~~~y~~sK~~~E--~~l~~-~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~----~~~Is~~DVA~ 164 (404)
..-.+ ...+--.|...+..+| +.|+. .+|+||+|-|..++.++. .+++++++++.-.. ..+|+..|.|-
T Consensus 115 ~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGe---rTg~yrlggD~ll~n~~G~SrIS~aDYAi 191 (211)
T COG2910 115 TRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGE---RTGNYRLGGDQLLVNAKGESRISYADYAI 191 (211)
T ss_pred ceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCcc---ccCceEeccceEEEcCCCceeeeHHHHHH
Confidence 11111 1122233445555555 55554 579999999999998844 36777777653222 25899999999
Q ss_pred HHHHHHhCCCCCCCcEEEEE
Q 015570 165 LLACMAKNRSLSYCKVVEVI 184 (404)
Q Consensus 165 ai~~~l~~~~~~~~~i~nI~ 184 (404)
+|++.++++. +.++.|.+.
T Consensus 192 A~lDe~E~~~-h~rqRftv~ 210 (211)
T COG2910 192 AVLDELEKPQ-HIRQRFTVA 210 (211)
T ss_pred HHHHHHhccc-ccceeeeec
Confidence 9999999998 677777664
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-10 Score=105.91 Aligned_cols=182 Identities=14% Similarity=0.083 Sum_probs=133.9
Q ss_pred EcCCCCHhhHHHHhC--CCCEEEEcCcCCC---CCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCch
Q 015570 22 ECDLEKRVQIEPALG--NASVVICCIGASE---KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA 96 (404)
Q Consensus 22 ~gDl~d~~~l~~aL~--gvDvVI~~ag~~~---~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~~ 96 (404)
.+||++..+.+..|+ ..-.|||+|+... ++.....++++.|+.-..|++..|.+.||+++|++.|..++....+.
T Consensus 38 d~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~y 117 (315)
T KOG1431|consen 38 DADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSY 117 (315)
T ss_pred cccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCC
Confidence 579999999998886 6789999997652 34455677889999999999999999999999998887775433221
Q ss_pred h----------hcccchHHHHHHHHHHHHH----HHCCCCEEEEEcCccCCCCCCcc--------------------Ccc
Q 015570 97 A----------ILNLFWGVLLWKRKAEEAL----IASGLPYTIVRPGGMERPTDAYK--------------------ETH 142 (404)
Q Consensus 97 ~----------~~~~~~~y~~sK~~~E~~l----~~~gl~~tIlRpg~~~G~~~~~~--------------------~~~ 142 (404)
. .-..-.+|...|+.+.-.. .+.|..++.+.|.++||+.+.+. .+.
T Consensus 118 PIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd 197 (315)
T KOG1431|consen 118 PIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTD 197 (315)
T ss_pred CCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCc
Confidence 1 1112346888886664333 35799999999999999877642 122
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+.+++.+...+.||+.+|+|+++++++.+-.. -+-+++..++ ....+|+|+++.+.++.+
T Consensus 198 ~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~--vEpiils~ge-~~EVtI~e~aeaV~ea~~ 258 (315)
T KOG1431|consen 198 ELTVWGSGSPLRQFIYSDDLADLFIWVLREYEG--VEPIILSVGE-SDEVTIREAAEAVVEAVD 258 (315)
T ss_pred eEEEecCCChHHHHhhHhHHHHHHHHHHHhhcC--ccceEeccCc-cceeEHHHHHHHHHHHhC
Confidence 467787787788899999999999999987552 2344455443 123788888887777654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-10 Score=107.09 Aligned_cols=166 Identities=14% Similarity=0.108 Sum_probs=111.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|+.|.+++.++++ .+|+|||++|....... ++...++.|+.+..++++++ .+.++
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 133 (246)
T PRK05653 54 GEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARY 133 (246)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988877665 46999999987543211 12334667888888888777 45678
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
++||++|+.+..... .....|..+|...|.+++. .++.+++||||.++++.................
T Consensus 134 ~~ii~~ss~~~~~~~------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~ 207 (246)
T PRK05653 134 GRIVNISSVSGVTGN------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEI 207 (246)
T ss_pred cEEEEECcHHhccCC------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcC
Confidence 899999997653321 2245688888877666542 589999999999988644310100000000111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+++.+|++++++.++.... ...+++|++.++.
T Consensus 208 ~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 208 PLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGM 244 (246)
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence 22457889999999999996533 2357888888774
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-09 Score=104.27 Aligned_cols=179 Identities=21% Similarity=0.149 Sum_probs=132.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.+...+..+++|+|.++++.+... .. . ..+........++.+++. .++++++++|.+++....
T Consensus 42 ~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~--~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~~-- 114 (275)
T COG0702 42 GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS--D-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAAS-- 114 (275)
T ss_pred CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc--c-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCCC--
Confidence 7899999999999999999999999999998654 21 1 223333434444444443 458899999998876532
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCc-c---Cc-ccEEEccCCccccCcccHHHHHHHHHHHH
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY-K---ET-HNITLSQEDTLFGGQVSNLQVAELLACMA 170 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~-~---~~-~~i~~~~~~~~~~~~Is~~DVA~ai~~~l 170 (404)
...|...|..+|+.++.+|++|+++|+..+|...... . .. +........ .....+..+|++++++..+
T Consensus 115 ------~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~d~a~~~~~~l 187 (275)
T COG0702 115 ------PSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGI-GRLSPIAVDDVAEALAAAL 187 (275)
T ss_pred ------ccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCC-CceeeeEHHHHHHHHHHHh
Confidence 2468999999999999999999999966665432221 1 01 111122211 1456799999999999999
Q ss_pred hCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCCCCC
Q 015570 171 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESI 212 (404)
Q Consensus 171 ~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~~~ 212 (404)
..+. ..+++|++.+.+. .++.++++.+....|++...+
T Consensus 188 ~~~~-~~~~~~~l~g~~~---~~~~~~~~~l~~~~gr~~~~~ 225 (275)
T COG0702 188 DAPA-TAGRTYELAGPEA---LTLAELASGLDYTIGRPVGLI 225 (275)
T ss_pred cCCc-ccCcEEEccCCce---ecHHHHHHHHHHHhCCcceee
Confidence 9887 6789999999864 999999999999999887663
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.2e-10 Score=106.79 Aligned_cols=166 Identities=10% Similarity=0.001 Sum_probs=113.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC-------CCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALGN-------ASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g-------vDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|+.|.+.+.++++. +|+||||+|...... .++...+++|+.+..++++++.. .+.
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 135 (247)
T PRK12935 56 HDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEE 135 (247)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 3588899999999988877653 799999999753221 22334467899999888888763 345
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... ..+..|+.+|..++.+++. .++.+++++||++.++.................
T Consensus 136 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 209 (247)
T PRK12935 136 GRIISISSIIGQAGG------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKI 209 (247)
T ss_pred cEEEEEcchhhcCCC------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhC
Confidence 689999997553221 1235799999988777642 489999999999976422110000000001111
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
..+.+++.+|++++++.++....+..+++|++.++.
T Consensus 210 ~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 210 PKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred CCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence 234578999999999999976544467899988874
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.9e-10 Score=106.57 Aligned_cols=166 Identities=11% Similarity=-0.025 Sum_probs=110.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHH----HHHHHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQA----TKNLVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~----~~~Ll~Aa~~agV 78 (404)
.+++++.+|+.|.+++..+++ ++|+|||++|...... .++...+++|+.+ +.+++.++++.++
T Consensus 53 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 132 (258)
T PRK12429 53 GKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG 132 (258)
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC
Confidence 568899999999998877665 6899999998653211 1112234566666 5666666677788
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-----cEE-
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-----NIT- 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-----~i~- 145 (404)
++||++||....... .....|+.+|...+.+.+. .++.+++||||+++++........ .+.
T Consensus 133 ~~iv~iss~~~~~~~------~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~ 206 (258)
T PRK12429 133 GRIINMASVHGLVGS------AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISE 206 (258)
T ss_pred eEEEEEcchhhccCC------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCCh
Confidence 999999997654321 2245788888888766642 579999999999987643210000 000
Q ss_pred ------EccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCC
Q 015570 146 ------LSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 187 (404)
Q Consensus 146 ------~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~ 187 (404)
........+.+++.+|+|++++.++..... ..++.|++.++-
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 207 EEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred HHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence 011111234689999999999999876432 246788887763
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.1e-10 Score=106.81 Aligned_cols=178 Identities=14% Similarity=0.055 Sum_probs=118.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC---CCC---CcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV---FDI---TGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~---~d~---~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|+.|.+++..++. ++|+|||++|...... .+. ...+.+|+.+..++++++ .+.+.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 128 (257)
T PRK07074 49 ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR 128 (257)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 468999999999998877665 5899999998753221 111 122457778777777766 44566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEE---cc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL---SQ 148 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~---~~ 148 (404)
.+||++||....... ....|+.+|..++.+++. .|+.++++|||++++............+ ..
T Consensus 129 ~~iv~~sS~~~~~~~-------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 201 (257)
T PRK07074 129 GAVVNIGSVNGMAAL-------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELK 201 (257)
T ss_pred eEEEEEcchhhcCCC-------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHH
Confidence 789999996443211 123689999998887763 4799999999999875422110000000 00
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCCCCCccHHHHHHHccc
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPS 203 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~~~~~si~ell~~i~~ 203 (404)
.....+.+++++|++++++.++.+. ....++++++.++.. ....|+++.+..
T Consensus 202 ~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~---~~~~~~~~~~~~ 254 (257)
T PRK07074 202 KWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLT---AGNREMARTLTL 254 (257)
T ss_pred hcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcC---cCChhhhhhhcc
Confidence 1122356899999999999999653 223467787877764 667777776654
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.5e-10 Score=105.48 Aligned_cols=167 Identities=11% Similarity=0.059 Sum_probs=112.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC---CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA---KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a---gVk 79 (404)
..++++.+|++|.+.+..+++ ++|+||||+|..... ..++...+++|+.++.+|++++... .-.
T Consensus 57 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 136 (249)
T PRK09135 57 GSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRG 136 (249)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCe
Confidence 358899999999998887765 579999999964321 1223456779999999999998642 123
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccE-EEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i-~~~~~~~~ 152 (404)
+++++++...... ......|+.+|..+|.+++. .++.+++||||+++++.+...-...+ ........
T Consensus 137 ~~~~~~~~~~~~~------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~ 210 (249)
T PRK09135 137 AIVNITDIHAERP------LKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTP 210 (249)
T ss_pred EEEEEeChhhcCC------CCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCC
Confidence 5666665433221 23456899999999998864 36999999999999875421100000 00001111
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
...+.+.+|+|++++.++.+.....+++|++.++..
T Consensus 211 ~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~ 246 (249)
T PRK09135 211 LKRIGTPEDIAEAVRFLLADASFITGQILAVDGGRS 246 (249)
T ss_pred cCCCcCHHHHHHHHHHHcCccccccCcEEEECCCee
Confidence 223457899999997777654434688999998863
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.2e-10 Score=108.25 Aligned_cols=179 Identities=15% Similarity=0.071 Sum_probs=117.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|+.|.+++..++. ++|+||||+|...... .++...+++|+.++.++++++ ++.+.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 128 (275)
T PRK08263 49 DRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRS 128 (275)
T ss_pred CCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 468889999999988776553 6799999999763211 223445678999877776664 56677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEE----
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNIT---- 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~---- 145 (404)
++||++||.+..... .....|+.+|..++.+.+. .|+.+++||||++..+..... ......
T Consensus 129 ~~iv~vsS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~ 202 (275)
T PRK08263 129 GHIIQISSIGGISAF------PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDT 202 (275)
T ss_pred CEEEEEcChhhcCCC------CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhh
Confidence 899999998664432 1235699999998876642 689999999999875432100 000000
Q ss_pred E---ccCCccccCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccc
Q 015570 146 L---SQEDTLFGGQ-VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204 (404)
Q Consensus 146 ~---~~~~~~~~~~-Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~ 204 (404)
+ .........+ ++.+|+|++++.+++... ..++.++..+.. .+++.++++.+...
T Consensus 203 ~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~ 261 (275)
T PRK08263 203 LREELAEQWSERSVDGDPEAAAEALLKLVDAEN-PPLRLFLGSGVL---DLAKADYERRLATW 261 (275)
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC-CCeEEEeCchHH---HHHHHHHHHHHHHH
Confidence 0 0000111235 789999999999998765 234444433333 27788887777653
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-09 Score=103.61 Aligned_cols=165 Identities=15% Similarity=0.132 Sum_probs=112.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------------CCCEEEEcCcCCCCCC-CC-----CCcchhhHHHHHHHHHHHHHhC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------------NASVVICCIGASEKEV-FD-----ITGPYRIDFQATKNLVDAATIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------------gvDvVI~~ag~~~~~~-~d-----~~~~~~vnv~~~~~Ll~Aa~~a 76 (404)
.+++++.+|+.|.+++.++++ ++|+|||++|...... .+ +...+++|+.+..+|++++.+.
T Consensus 56 ~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 135 (254)
T PRK12746 56 GKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPL 135 (254)
T ss_pred CcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 458899999999999887665 5899999999753321 11 1334568999999999988763
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-E
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-T 145 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~ 145 (404)
+..+||++||..+.... .....|+.+|..+|.+++. .++.+++||||+++++....... ..+ .
T Consensus 136 ~~~~~~~v~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~ 209 (254)
T PRK12746 136 LRAEGRVINISSAEVRLGF------TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRN 209 (254)
T ss_pred hhcCCEEEEECCHHhcCCC------CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHH
Confidence 33589999998764322 2235699999999877642 57999999999998764321100 001 1
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
+......++.+++.+|||++++.++.+.. ...+++|+|.++
T Consensus 210 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 210 FATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred HHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 11122233456799999999998887643 224678888765
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.4e-09 Score=102.13 Aligned_cols=163 Identities=13% Similarity=0.104 Sum_probs=111.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH-----hCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT-----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~-----~ag 77 (404)
.+++++.+|+.|.+++..++ .++|+|||++|...... .++...+.+|+.+..++++++. +.+
T Consensus 59 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 138 (249)
T PRK12827 59 GKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR 138 (249)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC
Confidence 46889999999998888776 36899999999764211 1223446789999999999887 566
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
.++||++||.+..... .....|..+|..++.+++. .++.+++||||++.++.......... + ...
T Consensus 139 ~~~iv~~sS~~~~~~~------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~-~-~~~ 210 (249)
T PRK12827 139 GGRIVNIASVAGVRGN------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEH-L-LNP 210 (249)
T ss_pred CeEEEEECCchhcCCC------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHH-H-Hhh
Confidence 7899999998664322 1235699999888776652 48999999999998763321100000 0 001
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.....+++.+|+|++++.++.+.. ...++++++.++
T Consensus 211 ~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 211 VPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred CCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence 111224589999999999996643 223677887665
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1e-09 Score=102.26 Aligned_cols=158 Identities=16% Similarity=0.129 Sum_probs=110.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC---C---CCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV---F---DITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~---~---d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|+.|.+++..+++ ++|+|||++|...... . ++...+.+|+.+..++++++. +.++
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 133 (239)
T PRK12828 54 DALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGG 133 (239)
T ss_pred cCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCC
Confidence 467889999999888776654 6899999998643211 1 112335677888888777764 4678
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
++||++||.+.+... ..+..|+.+|...+.+++. .++.+.+||+|+++++..... .. ..
T Consensus 134 ~~iv~~sS~~~~~~~------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------~~--~~ 199 (239)
T PRK12828 134 GRIVNIGAGAALKAG------PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------MP--DA 199 (239)
T ss_pred CEEEEECchHhccCC------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------CC--ch
Confidence 899999998765432 2345688899877766642 589999999999987632110 01 11
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.+..+++.+|||+++..++.+.. ...++.+++.++.
T Consensus 200 ~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~ 236 (239)
T PRK12828 200 DFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGV 236 (239)
T ss_pred hhhcCCCHHHHHHHHHHHhCcccccccceEEEecCCE
Confidence 12347999999999999998653 2346777777764
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-09 Score=103.80 Aligned_cols=178 Identities=15% Similarity=0.101 Sum_probs=118.7
Q ss_pred hhHHHHhC-CCCEEEEcCcCCCCCC----CCCCcchhhHHHHHHHHHHHHHh--CCCCEEEEeccCcccCCCCch-----
Q 015570 29 VQIEPALG-NASVVICCIGASEKEV----FDITGPYRIDFQATKNLVDAATI--AKVNHFIMVSSLGTNKFGFPA----- 96 (404)
Q Consensus 29 ~~l~~aL~-gvDvVI~~ag~~~~~~----~d~~~~~~vnv~~~~~Ll~Aa~~--agVkrfI~vSS~gv~~~~~~~----- 96 (404)
+.+..... ++|+|||+||..-... ..++..++..+..+..|+++..+ .+.+.||--|..|.|+.....
T Consensus 47 ~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~ 126 (297)
T COG1090 47 EGLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEE 126 (297)
T ss_pred chhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecC
Confidence 34445555 7999999999863321 22344566788899999998884 466677766666766544211
Q ss_pred h-hcccchHHHHHHHHHHHHHH-HCCCCEEEEEcCccCCCCCC-ccCc-ccEEEc-----cCCccccCcccHHHHHHHHH
Q 015570 97 A-ILNLFWGVLLWKRKAEEALI-ASGLPYTIVRPGGMERPTDA-YKET-HNITLS-----QEDTLFGGQVSNLQVAELLA 167 (404)
Q Consensus 97 ~-~~~~~~~y~~sK~~~E~~l~-~~gl~~tIlRpg~~~G~~~~-~~~~-~~i~~~-----~~~~~~~~~Is~~DVA~ai~ 167 (404)
. .-+.|-.-.+..++-|..-. ..|..++++|.|.|.++... .... ..+.++ +.+..+..|||++|+.++|.
T Consensus 127 ~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~ 206 (297)
T COG1090 127 SPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAIL 206 (297)
T ss_pred CCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHH
Confidence 1 11223233333344333333 36899999999999985332 2111 112222 23445567999999999999
Q ss_pred HHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCCCC
Q 015570 168 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKES 211 (404)
Q Consensus 168 ~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~~ 211 (404)
.++++... .+.||++++.. ++..++...+...+++|.+-
T Consensus 207 fll~~~~l--sGp~N~taP~P---V~~~~F~~al~r~l~RP~~~ 245 (297)
T COG1090 207 FLLENEQL--SGPFNLTAPNP---VRNKEFAHALGRALHRPAIL 245 (297)
T ss_pred HHHhCcCC--CCcccccCCCc---CcHHHHHHHHHHHhCCCccc
Confidence 99999774 67999999986 99999999999999977653
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.6e-09 Score=102.54 Aligned_cols=163 Identities=14% Similarity=0.107 Sum_probs=106.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHH----HHHHHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQA----TKNLVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~----~~~Ll~Aa~~agV 78 (404)
.+++++.+|++|.+++..+++ ++|+|||++|...... .++...+++|+.+ +++++..+++.+.
T Consensus 46 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~ 125 (273)
T PRK06182 46 LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS 125 (273)
T ss_pred CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC
Confidence 368899999999998887765 7899999999753321 1233445677776 5566667777777
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEcc---
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQ--- 148 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~--- 148 (404)
.+||++||.+..... .....|+.+|..++.+.+ ..|+.+++||||++..+..............
T Consensus 126 g~iv~isS~~~~~~~------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 199 (273)
T PRK06182 126 GRIINISSMGGKIYT------PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGA 199 (273)
T ss_pred CEEEEEcchhhcCCC------CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccc
Confidence 899999997643221 112459999999988753 2589999999999987532110000000000
Q ss_pred -------------CCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 149 -------------EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 149 -------------~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
.....+.+.+.+|||++++.++..... ...|.+..+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~--~~~~~~g~~ 248 (273)
T PRK06182 200 YAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTARRP--KTRYAVGFG 248 (273)
T ss_pred hHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCCC--CceeecCcc
Confidence 000112357999999999999986431 345554433
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=9e-10 Score=103.83 Aligned_cols=166 Identities=14% Similarity=0.082 Sum_probs=111.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-C-----CCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-F-----DITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-~-----d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|+.|.+++..+++ ++|+|||++|...... . ++...+.+|+.+..++++++.. .+.
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 133 (250)
T PRK08063 54 RKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGG 133 (250)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999998887765 5899999998653211 1 1122356788888887777754 456
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccEE-EccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNIT-LSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i~-~~~~ 149 (404)
++||++||.+..... ..+..|+.+|..+|.+++. .|+.+++||||++..+....... ..+. ....
T Consensus 134 g~iv~~sS~~~~~~~------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~ 207 (250)
T PRK08063 134 GKIISLSSLGSIRYL------ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARA 207 (250)
T ss_pred eEEEEEcchhhccCC------CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhc
Confidence 799999997654321 2345799999999998863 68999999999997643211100 0000 0001
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
....+.+++.+|+|++++.++.+.. ...++.+++.++.
T Consensus 208 ~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~ 246 (250)
T PRK08063 208 KTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGR 246 (250)
T ss_pred CCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence 1122347899999999999997643 2347788877664
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-09 Score=102.70 Aligned_cols=165 Identities=13% Similarity=0.058 Sum_probs=109.7
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC-------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
+++++.+|+.|.+.+..++ .++|+|||++|..... ..++...+++|+.++.++++++ +..+.
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 138 (264)
T PRK12829 59 KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH 138 (264)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 5689999999998887765 3789999999976211 1122344678888988888876 44455
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc------cc-
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET------HN- 143 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~------~~- 143 (404)
++||++|+.+..... ..+..|+.+|..+|.+++. .++.+++||||+++++....... +.
T Consensus 139 ~~~vv~~ss~~~~~~~------~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~ 212 (264)
T PRK12829 139 GGVIIALSSVAGRLGY------PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIG 212 (264)
T ss_pred CeEEEEecccccccCC------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCC
Confidence 578888876542211 1234699999998888764 48999999999998864321100 00
Q ss_pred -EEEc---cCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 144 -ITLS---QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 144 -i~~~---~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.... ........+++.+|+|+++..++... ....++.|++.++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~ 261 (264)
T PRK12829 213 LDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNV 261 (264)
T ss_pred hhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence 0000 00111234799999999998888643 22357788888875
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.7e-09 Score=98.85 Aligned_cols=158 Identities=15% Similarity=0.101 Sum_probs=105.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCCCC------CCCcchhhHHHH----HHHHHHHHHhCCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEKEVF------DITGPYRIDFQA----TKNLVDAATIAKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~----~~~Ll~Aa~~agVkrfI 82 (404)
.+++++++|+.|.+++.++++ ++|+|||++|....... ++...+..|+.+ +.++++++++.+ .+||
T Consensus 47 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v 125 (227)
T PRK08219 47 PGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVV 125 (227)
T ss_pred ccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEE
Confidence 368899999999999998886 69999999997532211 122234566666 555555555553 6899
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CC-CCEEEEEcCccCCCCCCccCcccEEEccCCccccCc
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SG-LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ 156 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~g-l~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~ 156 (404)
++||..++... .....|+.+|..++.+++. .+ +.+..|+||.+.++....... ........+.+
T Consensus 126 ~~ss~~~~~~~------~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~----~~~~~~~~~~~ 195 (227)
T PRK08219 126 FINSGAGLRAN------PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA----QEGGEYDPERY 195 (227)
T ss_pred EEcchHhcCcC------CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh----hhccccCCCCC
Confidence 99987664332 2245799999988876653 34 899999999876542211000 00111122457
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 157 VSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 157 Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
++++|+|++++.++++.. .+.++++.-.
T Consensus 196 ~~~~dva~~~~~~l~~~~--~~~~~~~~~~ 223 (227)
T PRK08219 196 LRPETVAKAVRFAVDAPP--DAHITEVVVR 223 (227)
T ss_pred CCHHHHHHHHHHHHcCCC--CCccceEEEe
Confidence 999999999999998765 3567776543
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=2e-09 Score=100.76 Aligned_cols=165 Identities=14% Similarity=0.080 Sum_probs=108.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|....... ++...+..|+.+..++++++.. .+.
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 134 (248)
T PRK05557 55 GKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRS 134 (248)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988877654 68999999987532211 1223356788888888777754 466
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
++||++||.+..... .....|+.+|..++.+++ ..++.+++||||++..+.................
T Consensus 135 ~~~v~iss~~~~~~~------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~ 208 (248)
T PRK05557 135 GRIINISSVVGLMGN------PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQI 208 (248)
T ss_pred eEEEEEcccccCcCC------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcC
Confidence 789999997443221 123568999988886665 2589999999999865432211000000001111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
..+.+++.+|+|+++..++.... ...+++|+|.++
T Consensus 209 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~ 244 (248)
T PRK05557 209 PLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGG 244 (248)
T ss_pred CCCCCcCHHHHHHHHHHHcCcccCCccccEEEecCC
Confidence 22346899999999998886622 234678988766
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.4e-09 Score=102.38 Aligned_cols=166 Identities=10% Similarity=0.053 Sum_probs=112.5
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.+++++.+|+.|.+++.+++ .++|+||||+|...... .++...+..|+.+..++++++.. .+.
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 135 (250)
T PRK12939 56 GRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGR 135 (250)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 46899999999999887766 46899999999754221 12223356888888888877654 344
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccEEEccCC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQED 150 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i~~~~~~ 150 (404)
.+||++||.+..... .....|+.+|..+|.+++. .++.+++|+||.+..+....... .........
T Consensus 136 g~iv~isS~~~~~~~------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 209 (250)
T PRK12939 136 GRIVNLASDTALWGA------PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKG 209 (250)
T ss_pred eEEEEECchhhccCC------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhc
Confidence 599999997654322 1235699999999888763 57999999999987653321111 000001111
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.....+++.+|||++++.++.+.. ...|+.+++.++.
T Consensus 210 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 210 RALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 223457899999999999997643 3457888887763
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.9e-09 Score=100.59 Aligned_cols=164 Identities=14% Similarity=0.080 Sum_probs=108.9
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agVk 79 (404)
.+.++.+|++|.+++.+++. .+|+|||++|...... .++...+++|+.+..++++++.. .+.+
T Consensus 49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 128 (239)
T TIGR01830 49 KALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSG 128 (239)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe
Confidence 47899999999998877764 4799999999753211 12334567888899998888764 4567
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||.+..... .....|+.+|..++.+++. .|+.++++|||++.++..................
T Consensus 129 ~~v~~sS~~~~~g~------~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~ 202 (239)
T TIGR01830 129 RIINISSVVGLMGN------AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIP 202 (239)
T ss_pred EEEEECCccccCCC------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCC
Confidence 99999997543221 1235688899877766542 5899999999998654221110000000011112
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...+.+.+|+|++++.++.+.. ...+++|++.++
T Consensus 203 ~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 203 LGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred cCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 2346789999999998885532 235778988655
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.7e-09 Score=102.72 Aligned_cols=163 Identities=13% Similarity=0.057 Sum_probs=108.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|++|.+++..+++ ++|+|||++|...... .++...+.+|+.++.++++++. +.+.
T Consensus 59 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~ 138 (274)
T PRK07775 59 GEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRR 138 (274)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 357889999999998876664 6899999998753211 1122335788888888887764 3455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE------
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT------ 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~------ 145 (404)
.+||++||...+... .....|+.+|..+|.+++. .|+.+++||||.+............+.
T Consensus 139 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~ 212 (274)
T PRK07775 139 GDLIFVGSDVALRQR------PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDW 212 (274)
T ss_pred ceEEEECChHhcCCC------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHH
Confidence 689999998654322 1235799999999988863 389999999998754321110000000
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
........+.+++.+|+|++++.++.++. .+.+||+.-.
T Consensus 213 ~~~~~~~~~~~~~~~dva~a~~~~~~~~~--~~~~~~~~~~ 251 (274)
T PRK07775 213 AKWGQARHDYFLRASDLARAITFVAETPR--GAHVVNMEVQ 251 (274)
T ss_pred HHhcccccccccCHHHHHHHHHHHhcCCC--CCCeeEEeec
Confidence 00011122457999999999999998754 3456776633
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=7e-09 Score=99.90 Aligned_cols=153 Identities=12% Similarity=0.072 Sum_probs=103.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|+.|.+++..+++ ++|+|||++|....... ++...+++|+.++.++++++ ++.+.
T Consensus 50 ~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 129 (277)
T PRK06180 50 DRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRR 129 (277)
T ss_pred CCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCC
Confidence 468899999999988877665 58999999997532211 12334678999999988884 44566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc---ccEEE--
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET---HNITL-- 146 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~---~~i~~-- 146 (404)
.+||++||.+..... .....|+.+|..+|.+++. .|+++++||||+++++....... ..+..
T Consensus 130 ~~iv~iSS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~ 203 (277)
T PRK06180 130 GHIVNITSMGGLITM------PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYD 203 (277)
T ss_pred CEEEEEecccccCCC------CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHH
Confidence 799999997654321 2345799999998887753 48999999999997643211000 00000
Q ss_pred --------ccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 147 --------SQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 147 --------~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.........++..+|+|++++.++.+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~ 239 (277)
T PRK06180 204 ALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESDE 239 (277)
T ss_pred HHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCC
Confidence 0000011235789999999999998765
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.8e-09 Score=100.30 Aligned_cols=164 Identities=11% Similarity=0.071 Sum_probs=109.4
Q ss_pred CCeEEEEcCCCCHhhHHH------HhCCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHH----HHhCCCC
Q 015570 16 EMLELVECDLEKRVQIEP------ALGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~------aL~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~A----a~~agVk 79 (404)
.+++++.+|+.|.+++.. .+.++|+||||+|...... .++...+.+|+.+..+++++ +++.+..
T Consensus 54 ~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 133 (280)
T PRK06914 54 QNIKVQQLDVTDQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG 133 (280)
T ss_pred CceeEEecCCCCHHHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 478999999999987764 1246799999998754221 11223356788887777776 4666778
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cEEEccC--
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITLSQE-- 149 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i~~~~~-- 149 (404)
+||++||.+..... .....|+.+|..++.+++. .|+.+++||||.++.+........ .......
T Consensus 134 ~iv~vsS~~~~~~~------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~ 207 (280)
T PRK06914 134 KIINISSISGRVGF------PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSP 207 (280)
T ss_pred EEEEECcccccCCC------CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccc
Confidence 99999987543221 2245799999998887753 489999999999987532210000 0000000
Q ss_pred ------------CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 150 ------------DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 150 ------------~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
....+.+++.+|+|++++.++.+... ...|++.++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~--~~~~~~~~~~ 255 (280)
T PRK06914 208 YKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKRP--KLRYPIGKGV 255 (280)
T ss_pred hHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCCC--CcccccCCch
Confidence 01123468999999999999988763 3568877665
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.03 E-value=6e-09 Score=98.10 Aligned_cols=166 Identities=10% Similarity=0.037 Sum_probs=111.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+..+|++++. +.+.
T Consensus 52 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 131 (250)
T TIGR03206 52 GNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGA 131 (250)
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 468999999999988887764 6899999998642211 1123346789999988877664 5677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC----c-ccE-E
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE----T-HNI-T 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~----~-~~i-~ 145 (404)
++||++||.+.+... .....|+.+|..++.+++. .++.++++|||+++++...... . ..+ .
T Consensus 132 ~~ii~iss~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~ 205 (250)
T TIGR03206 132 GRIVNIASDAARVGS------SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLRE 205 (250)
T ss_pred eEEEEECchhhccCC------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHH
Confidence 899999998765432 1235699999888777653 4899999999999876321100 0 000 0
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
........+.+...+|||+++..++.... ...++++++.++.
T Consensus 206 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 206 AFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred HHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence 00011112335789999999999987643 2346788887653
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.7e-09 Score=100.56 Aligned_cols=165 Identities=12% Similarity=-0.005 Sum_probs=108.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC---C---CCCcchhhHHHHHHHHHH----HHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV---F---DITGPYRIDFQATKNLVD----AATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~---~---d~~~~~~vnv~~~~~Ll~----Aa~~agV 78 (404)
.++.++.+|+.|.+++.++++ ++|+||||+|...... . ++...+.+|+.+..++++ ++++.+.
T Consensus 53 ~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 132 (252)
T PRK06138 53 GRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGG 132 (252)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Confidence 458899999999998887654 7899999999753211 1 122235678887766555 4456677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccE-----E-
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-----T- 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i-----~- 145 (404)
++||++||.+..... .....|+.+|..++.+++. .|+.+++||||+++++.......... .
T Consensus 133 ~~ii~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~ 206 (252)
T PRK06138 133 GSIVNTASQLALAGG------RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALRE 206 (252)
T ss_pred eEEEEECChhhccCC------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHH
Confidence 899999998653321 1235799999998887763 48999999999998764321100000 0
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
..........+++.+|+|++++.++.+.... .+..+.+.++
T Consensus 207 ~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 207 ALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 0001112234789999999999999876532 2455555444
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.8e-09 Score=100.30 Aligned_cols=164 Identities=11% Similarity=0.005 Sum_probs=107.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-------CCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-------~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++.++.+|+.|.+++..+++ ++|+|||++|...... .++...+.+|+.+..++++.+ ++.+
T Consensus 53 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 132 (251)
T PRK07231 53 GRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG 132 (251)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 357899999999999887764 5799999998742211 122334667777766655554 4567
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc----c-cEE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----H-NIT 145 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~----~-~i~ 145 (404)
.++||++||.+..... .....|+.+|..++.+++. .++.+++||||++..+....... . ...
T Consensus 133 ~~~iv~~sS~~~~~~~------~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~ 206 (251)
T PRK07231 133 GGAIVNVASTAGLRPR------PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAK 206 (251)
T ss_pred CcEEEEEcChhhcCCC------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHH
Confidence 7899999998765432 2345789999888877653 48999999999986543211000 0 000
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
+. .....+.+++++|+|++++.++.+.... .++.+.+.++
T Consensus 207 ~~-~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 247 (251)
T PRK07231 207 FL-ATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGG 247 (251)
T ss_pred Hh-cCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCC
Confidence 10 1112345789999999999999765422 3556666554
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.1e-09 Score=100.89 Aligned_cols=164 Identities=13% Similarity=0.045 Sum_probs=111.3
Q ss_pred CeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----C-CCEEE
Q 015570 17 MLELVECDLEKRVQIEPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K-VNHFI 82 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----g-VkrfI 82 (404)
+++++.+|+.|.+.+..++. ++|+|||++|...... .++...+.+|+.+..++++++.+. + ..+||
T Consensus 54 ~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv 133 (245)
T PRK07060 54 GCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIV 133 (245)
T ss_pred CCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 46789999999988887775 5899999999753211 123334568888888888877642 2 36899
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC--ccCcccEEEccCCccc
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA--YKETHNITLSQEDTLF 153 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~--~~~~~~i~~~~~~~~~ 153 (404)
++||.+.+... .....|+.+|..+|.+++. .|+.++.||||+++++... +...............
T Consensus 134 ~~sS~~~~~~~------~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~ 207 (245)
T PRK07060 134 NVSSQAALVGL------PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPL 207 (245)
T ss_pred EEccHHHcCCC------CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCC
Confidence 99998654332 1235799999999987753 4799999999999876432 1110000000011123
Q ss_pred cCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcC
Q 015570 154 GGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAE 186 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~ 186 (404)
+.+++.+|+|++++.++.+... ..++++++.++
T Consensus 208 ~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK07060 208 GRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG 241 (245)
T ss_pred CCCCCHHHHHHHHHHHcCcccCCccCcEEeECCC
Confidence 4579999999999999976542 24677776655
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.6e-09 Score=102.56 Aligned_cols=165 Identities=15% Similarity=0.090 Sum_probs=114.8
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-------CCCCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-------~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
++.++.+|+.|.+++.++++ ++|+|||++|.... ...++...+++|+.+..++++++... .-.+
T Consensus 107 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 186 (300)
T PRK06128 107 KAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGAS 186 (300)
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCE
Confidence 57789999999988776653 78999999996421 11234556789999999999988753 2248
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC--cccEEEccCCc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNITLSQEDT 151 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--~~~i~~~~~~~ 151 (404)
||++||...+... ..+..|+.+|..++.+++. .|+.+++|+||++.++...... ...+.......
T Consensus 187 iv~~sS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~ 260 (300)
T PRK06128 187 IINTGSIQSYQPS------PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSET 260 (300)
T ss_pred EEEECCccccCCC------CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCC
Confidence 9999998765432 1235699999999888763 5899999999999876432110 00010111122
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+...+|||++++.++.+.. +..+++|++.++.
T Consensus 261 p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~ 297 (300)
T PRK06128 261 PMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGL 297 (300)
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCE
Confidence 23446789999999999987643 3357888888774
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.5e-09 Score=100.14 Aligned_cols=166 Identities=16% Similarity=0.068 Sum_probs=111.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC--------CCCCCcchhhHHHHHHHHHHHHHhC----
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATIA---- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~--------~~d~~~~~~vnv~~~~~Ll~Aa~~a---- 76 (404)
.++.++.+|++|.+++.+++ ..+|+||||+|..... ..++...+++|+.+..+|++++...
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (256)
T PRK12745 52 VEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQ 131 (256)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhc
Confidence 46899999999988876654 3689999999864211 1223344678999998988877432
Q ss_pred -C-----CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc
Q 015570 77 -K-----VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN 143 (404)
Q Consensus 77 -g-----VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~ 143 (404)
+ +.+||++||....... .....|+.+|..+|.+++. .|+.+++||||.++++.........
T Consensus 132 ~~~~~~~~~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~ 205 (256)
T PRK12745 132 PEPEELPHRSIVFVSSVNAIMVS------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKY 205 (256)
T ss_pred cCcCCCCCcEEEEECChhhccCC------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhH
Confidence 1 5689999997664322 1234699999999877652 5899999999999875432111000
Q ss_pred EEEc-cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 144 ITLS-QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 144 i~~~-~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.... ........+.+..|+++++..++.... ...+++|+|.++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~ 251 (256)
T PRK12745 206 DALIAKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGL 251 (256)
T ss_pred HhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCe
Confidence 0000 011122346789999999999886542 2246789887764
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1e-08 Score=97.99 Aligned_cols=154 Identities=14% Similarity=0.059 Sum_probs=105.1
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHH----HHhCC
Q 015570 15 VEMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDA----ATIAK 77 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~A----a~~ag 77 (404)
..+++++++|+.|.+++.++++ .+|+||||+|....... ++...+++|+.+..+++++ +++.+
T Consensus 44 ~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 123 (270)
T PRK06179 44 IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG 123 (270)
T ss_pred cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 3578999999999999888775 47999999998643211 2234567888888877776 46678
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc--cEEEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--NITLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~--~i~~~~ 148 (404)
+++||++||....... .....|+.+|..+|.+++. .|+.+++||||++.++........ .+....
T Consensus 124 ~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~ 197 (270)
T PRK06179 124 SGRIINISSVLGFLPA------PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYD 197 (270)
T ss_pred CceEEEECCccccCCC------CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhH
Confidence 8899999997653321 1235799999999877653 699999999999876533211100 000000
Q ss_pred ---------CCccccCcccHHHHHHHHHHHHhCCC
Q 015570 149 ---------EDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 149 ---------~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...........+|+|++++.++....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~ 232 (270)
T PRK06179 198 RERAVVSKAVAKAVKKADAPEVVADTVVKAALGPW 232 (270)
T ss_pred HHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence 00011234678999999999997654
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-09 Score=100.93 Aligned_cols=153 Identities=22% Similarity=0.158 Sum_probs=115.5
Q ss_pred CCCCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 13 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 13 ~~~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
.+...+.++.+|..-..-+...+.++..|+.|+|... +...+.++|-+...+-+++++++||++|+|+|.. .+
T Consensus 93 sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg----n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~---d~ 165 (283)
T KOG4288|consen 93 SWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG----NIILMDRINGTANINAVKAAAKAGVPRFVYISAH---DF 165 (283)
T ss_pred CCCcccchhhccccccCcchhhhcCCcccHHHhcCcc----chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhh---hc
Confidence 4557788899998888888888999999999998754 4455678888888899999999999999999953 22
Q ss_pred CCchhhcccchHHHHHHHHHHHHHHH-CCCCEEEEEcCccCCCCCCccCcc-------------c-E-----EEccCCcc
Q 015570 93 GFPAAILNLFWGVLLWKRKAEEALIA-SGLPYTIVRPGGMERPTDAYKETH-------------N-I-----TLSQEDTL 152 (404)
Q Consensus 93 ~~~~~~~~~~~~y~~sK~~~E~~l~~-~gl~~tIlRpg~~~G~~~~~~~~~-------------~-i-----~~~~~~~~ 152 (404)
+.. .....+|...|+++|..|.. .++.-+|||||+|||.+....... . . .+..-+..
T Consensus 166 ~~~---~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l 242 (283)
T KOG4288|consen 166 GLP---PLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPL 242 (283)
T ss_pred CCC---CccchhhhccchHHHHHHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccc
Confidence 211 12335899999999999986 678889999999999743211000 0 0 12223344
Q ss_pred ccCcccHHHHHHHHHHHHhCCCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
....++.++||.+++.++.++.+
T Consensus 243 ~~ppvnve~VA~aal~ai~dp~f 265 (283)
T KOG4288|consen 243 LAPPVNVESVALAALKAIEDPDF 265 (283)
T ss_pred cCCCcCHHHHHHHHHHhccCCCc
Confidence 45689999999999999999985
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.1e-09 Score=99.05 Aligned_cols=154 Identities=14% Similarity=0.004 Sum_probs=100.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC-------CCCCCcchhhHHHHHHH----HHHHHHhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKN----LVDAATIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~~~~----Ll~Aa~~ag 77 (404)
.+++++.+|+.|.+++..+++ ++|+|||++|..... ..++...+++|+.+..+ ++.++++.+
T Consensus 46 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 125 (248)
T PRK10538 46 DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN 125 (248)
T ss_pred cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 368899999999988876653 799999999874211 11223346777777544 555556677
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~i~~~~~ 149 (404)
..+||++||.+..... .....|+.+|..++.+.+. .|+.+++|+||.+.+....... .........
T Consensus 126 ~~~iv~isS~~~~~~~------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~ 199 (248)
T PRK10538 126 HGHIINIGSTAGSWPY------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK 199 (248)
T ss_pred CcEEEEECCcccCCCC------CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHh
Confidence 7899999998654321 2235799999999888753 5799999999999753221000 000000000
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
......++..+|+|++++.++..+..
T Consensus 200 ~~~~~~~~~~~dvA~~~~~l~~~~~~ 225 (248)
T PRK10538 200 TYQNTVALTPEDVSEAVWWVATLPAH 225 (248)
T ss_pred hccccCCCCHHHHHHHHHHHhcCCCc
Confidence 00012357999999999999976653
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.3e-09 Score=101.80 Aligned_cols=166 Identities=11% Similarity=0.058 Sum_probs=114.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC----C-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA----K- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a----g- 77 (404)
.+++++.+|+.|.+++..+++ .+|+|||++|..... ..++...+++|+.+..+|++++... +
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 131 (257)
T PRK07067 52 PAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR 131 (257)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC
Confidence 358899999999988877664 689999999875321 1223445778999999999888642 1
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--c------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--H------ 142 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~------ 142 (404)
-.+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++....... .
T Consensus 132 ~~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~ 205 (257)
T PRK07067 132 GGKIINMASQAGRRGE------ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRP 205 (257)
T ss_pred CcEEEEeCCHHhCCCC------CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCC
Confidence 2489999997543221 2345799999998887752 68999999999998863211000 0
Q ss_pred ---cEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 143 ---NITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 143 ---~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...........+.+++.+|||++++.++.... ...+++|++.++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 254 (257)
T PRK07067 206 PGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGN 254 (257)
T ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCE
Confidence 00011122234567899999999999997643 2347899988775
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.7e-09 Score=98.96 Aligned_cols=164 Identities=14% Similarity=0.023 Sum_probs=112.0
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCEE
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHF 81 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrf 81 (404)
++.++.+|+++.+++..+++ ++|+|||++|...... .++...+++|+.+..++++++.+. ...+|
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~i 136 (252)
T PRK06077 57 EGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAI 136 (252)
T ss_pred eeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEE
Confidence 56788999999988776654 6899999999743211 112344678888888888877653 23589
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCc-ccE---EEccCCc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET-HNI---TLSQEDT 151 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~-~~i---~~~~~~~ 151 (404)
|++||...+... ..+..|+.+|..+|.+++. .++.+.+|+||++.+........ ... .......
T Consensus 137 v~~sS~~~~~~~------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~ 210 (252)
T PRK06077 137 VNIASVAGIRPA------YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFT 210 (252)
T ss_pred EEEcchhccCCC------CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcC
Confidence 999998664322 2346899999999888863 37899999999997653211000 000 0000111
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
..+.+++++|+|++++.++.... ..+++|++.++.
T Consensus 211 ~~~~~~~~~dva~~~~~~~~~~~-~~g~~~~i~~g~ 245 (252)
T PRK06077 211 LMGKILDPEEVAEFVAAILKIES-ITGQVFVLDSGE 245 (252)
T ss_pred cCCCCCCHHHHHHHHHHHhCccc-cCCCeEEecCCe
Confidence 23357999999999999997554 457899998885
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.9e-09 Score=98.92 Aligned_cols=166 Identities=12% Similarity=0.062 Sum_probs=110.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHH----HHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLV----DAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll----~Aa~~agV 78 (404)
.++.++.+|+.|.+++..+++ .+|+|||++|..... ..++...+++|+.+..+++ +.+++.+.
T Consensus 52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 131 (245)
T PRK12824 52 DQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGY 131 (245)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC
Confidence 468999999999988777654 589999999975321 1122334568888877764 45566677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||.+.+... .....|..+|..++.+++. .|+.+++|+||++.++.................
T Consensus 132 ~~iv~iss~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~ 205 (245)
T PRK12824 132 GRIINISSVNGLKGQ------FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQI 205 (245)
T ss_pred eEEEEECChhhccCC------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcC
Confidence 899999998765332 1235799999887766653 589999999999976532211110000001111
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+...+||++++..++... ....++++++.++.
T Consensus 206 ~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12824 206 PMKRLGTPEEIAAAVAFLVSEAAGFITGETISINGGL 242 (245)
T ss_pred CCCCCCCHHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence 2334678999999999888653 33457888887773
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.7e-09 Score=99.62 Aligned_cols=163 Identities=6% Similarity=-0.060 Sum_probs=111.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------C---CCCCcchhhHHHHHHHHHHHHHh----
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------V---FDITGPYRIDFQATKNLVDAATI---- 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~---~d~~~~~~vnv~~~~~Ll~Aa~~---- 75 (404)
.++.++.+|++|.+++..+++ ++|+|||++|..... . .++...+.+|+.+..++++++..
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (250)
T PRK07774 55 GTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAK 134 (250)
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 367889999999988776554 689999999975311 0 12223467899999998888764
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccE-EEc
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLS 147 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i-~~~ 147 (404)
.+.++||++||.+++.. ...|+.+|..+|.+++. .|+.+++|+||.+..+.........+ ...
T Consensus 135 ~~~~~iv~~sS~~~~~~---------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~ 205 (250)
T PRK07774 135 RGGGAIVNQSSTAAWLY---------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADM 205 (250)
T ss_pred hCCcEEEEEecccccCC---------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHH
Confidence 34569999999876432 24699999999988763 47899999999987654321100000 001
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
........+.+.+|++++++.++.+.. ...+++|++.++.
T Consensus 206 ~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~ 246 (250)
T PRK07774 206 VKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQ 246 (250)
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCe
Confidence 111112235689999999999987642 2457899998875
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.1e-08 Score=95.93 Aligned_cols=146 Identities=11% Similarity=0.039 Sum_probs=103.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|+.|.+++..+++ ++|+|||++|...... .++...+++|+.+..++++++. +.+.
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 135 (239)
T PRK07666 56 VKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQS 135 (239)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 368899999999998887765 7999999998753211 1223446788888878777665 4567
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
+++|++||....... .....|+.+|..++.+++ ..|+.+++||||++........ .. .. .
T Consensus 136 ~~iv~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---~~--~~--~ 202 (239)
T PRK07666 136 GDIINISSTAGQKGA------AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---GL--TD--G 202 (239)
T ss_pred cEEEEEcchhhccCC------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---cc--cc--c
Confidence 799999997654332 123468999988877764 2589999999999976532110 01 11 1
Q ss_pred cccCcccHHHHHHHHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
....++..+|+|+++..++.++.
T Consensus 203 ~~~~~~~~~~~a~~~~~~l~~~~ 225 (239)
T PRK07666 203 NPDKVMQPEDLAEFIVAQLKLNK 225 (239)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCC
Confidence 12346899999999999998754
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.9e-09 Score=100.68 Aligned_cols=167 Identities=13% Similarity=0.082 Sum_probs=102.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CC---CCCcchhhHHHHH----HHHHHHHHh
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VF---DITGPYRIDFQAT----KNLVDAATI 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~---d~~~~~~vnv~~~----~~Ll~Aa~~ 75 (404)
..+.++.+|+.|.+++..+++ ++|+||||++..... .. ++...+.+|+.+. +++++.+++
T Consensus 55 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 134 (256)
T PRK09186 55 KKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKK 134 (256)
T ss_pred CceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 356788999999998887765 389999999753211 01 1122234555444 445556666
Q ss_pred CCCCEEEEeccCcccCCCC----chhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccE
Q 015570 76 AKVNHFIMVSSLGTNKFGF----PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI 144 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~----~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i 144 (404)
.+.++||++||.+...... ..........|+.+|...+.+.+ ..|+.+++|+||++++.... ...
T Consensus 135 ~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~----~~~ 210 (256)
T PRK09186 135 QGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE----AFL 210 (256)
T ss_pred cCCceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH----HHH
Confidence 6778999999975432110 00111122369999998888875 25799999999998764211 000
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
...........+++.+|||++++.++.+.... .++.+.+.++
T Consensus 211 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 211 NAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred HHHHhcCCccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence 00001111235789999999999999765422 3566665554
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-08 Score=94.91 Aligned_cols=157 Identities=14% Similarity=0.049 Sum_probs=108.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh---CCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI---AKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~---agVk 79 (404)
.+++++.+|+.|.+++..+++ ++|+|||++|...... .++...+++|+.+..++++++.+ .+.+
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 133 (237)
T PRK07326 54 GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGG 133 (237)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCe
Confidence 578999999999988877664 7899999998653211 11223466788888887777653 3456
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||....... .....|..+|..++.+.+. .|+++++||||++......... . ..
T Consensus 134 ~iv~~ss~~~~~~~------~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-----~---~~- 198 (237)
T PRK07326 134 YIINISSLAGTNFF------AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-----S---EK- 198 (237)
T ss_pred EEEEECChhhccCC------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc-----c---hh-
Confidence 89999997653321 2235688898877665543 5899999999999764321110 0 00
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
....+..+|+|++++.++..+.......+++..+.
T Consensus 199 ~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~ 233 (237)
T PRK07326 199 DAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVRPSR 233 (237)
T ss_pred hhccCCHHHHHHHHHHHHhCCccccccceEEecCC
Confidence 11248999999999999998876667777776543
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.7e-09 Score=99.57 Aligned_cols=165 Identities=12% Similarity=0.070 Sum_probs=111.9
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agVk 79 (404)
++.++.+|+.|.+++..+++ ..|+|||++|...... .++...+.+|+.+..++++++.+ .+.+
T Consensus 60 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g 139 (255)
T PRK07523 60 SAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAG 139 (255)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe
Confidence 47889999999988877764 5899999999753221 11233456888888888887764 3667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cccEE-EccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~i~-~~~~~ 150 (404)
+||++||....... ..+..|+.+|..+|.+++. .|+.+++||||++.++...... ...+. .....
T Consensus 140 ~iv~iss~~~~~~~------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~ 213 (255)
T PRK07523 140 KIINIASVQSALAR------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKR 213 (255)
T ss_pred EEEEEccchhccCC------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhc
Confidence 99999997653321 2345799999999888763 5899999999999876432110 00000 00111
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...+.+...+|||++++.++.+.. +..++++++.++.
T Consensus 214 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~ 251 (255)
T PRK07523 214 TPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGGI 251 (255)
T ss_pred CCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCe
Confidence 123346789999999999997543 2346788877764
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.3e-09 Score=96.76 Aligned_cols=164 Identities=13% Similarity=0.034 Sum_probs=105.9
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHH----HHHHHHhCCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKN----LVDAATIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~----Ll~Aa~~agVk 79 (404)
.+..+.+|+.|.+++.++++ ++|+||||+|..... ..++...+++|+.+..+ +++.+++.++.
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 133 (246)
T PRK12938 54 DFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWG 133 (246)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe
Confidence 56778999999988876653 689999999975321 11233446778777555 45555566778
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||....... .....|+.+|..++.+++. .|+.+++|+||++.++.........+........
T Consensus 134 ~iv~isS~~~~~~~------~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~ 207 (246)
T PRK12938 134 RIINISSVNGQKGQ------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIP 207 (246)
T ss_pred EEEEEechhccCCC------CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCC
Confidence 99999997543221 2245799999988776642 5899999999999865322100000000001112
Q ss_pred ccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 153 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
...+...+|++++++.++.+. ....++++.+.++
T Consensus 208 ~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 208 VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred ccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence 233578899999999998764 3334667776654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.8e-09 Score=98.16 Aligned_cols=166 Identities=13% Similarity=0.101 Sum_probs=108.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC--CC-----CCCcchhhHHHHHHHHHHHHHhC-----
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE--VF-----DITGPYRIDFQATKNLVDAATIA----- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~--~~-----d~~~~~~vnv~~~~~Ll~Aa~~a----- 76 (404)
.++.++.+|++|.+++.+++. .+|+|||++|..... .. ++...+++|+.+..++++++...
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (248)
T PRK06123 52 GEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRH 131 (248)
T ss_pred CcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 357889999999988887765 689999999975321 11 22244788999988888776542
Q ss_pred -C-CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc-EEE
Q 015570 77 -K-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITL 146 (404)
Q Consensus 77 -g-VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~-i~~ 146 (404)
+ -.+||++||.+...... ..+..|+.+|..+|.+++. .|+.+++||||+++++......... +..
T Consensus 132 ~~~~g~iv~~sS~~~~~~~~-----~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~ 206 (248)
T PRK06123 132 GGRGGAIVNVSSMAARLGSP-----GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDR 206 (248)
T ss_pred CCCCeEEEEECchhhcCCCC-----CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHH
Confidence 1 13689999975432211 1123599999999987753 4899999999999987432110000 000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+..+.+.+|++++++.++.... ...+++|++.++
T Consensus 207 ~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 207 VKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence 0001111223578999999999987643 235778888764
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.4e-08 Score=95.08 Aligned_cols=166 Identities=13% Similarity=0.048 Sum_probs=108.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|+.|.+++..++. ++|+|||++|...... .++...+.+|+.+..++++++. +.+.
T Consensus 55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 134 (247)
T PRK05565 55 GDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKS 134 (247)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 458899999999998877664 7999999999763211 1123346778888777776665 4566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
++||++||.+..... .....|+.+|...+.+++ ..|+.+++||||++....................
T Consensus 135 ~~~v~~sS~~~~~~~------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 208 (247)
T PRK05565 135 GVIVNISSIWGLIGA------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEI 208 (247)
T ss_pred cEEEEECCHhhccCC------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcC
Confidence 789999997654321 123468888877776654 2689999999999865432211100000000011
Q ss_pred cccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~ 187 (404)
....++..+|++++++.++..... ..++++++.++.
T Consensus 209 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~ 245 (247)
T PRK05565 209 PLGRLGKPEEIAKVVLFLASDDASYITGQIITVDGGW 245 (247)
T ss_pred CCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence 123467999999999999976442 346677776653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=97.15 Aligned_cols=164 Identities=16% Similarity=0.124 Sum_probs=105.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC--C-----CCCCCcchhhHHHHHH----HHHHHHHhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK--E-----VFDITGPYRIDFQATK----NLVDAATIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~--~-----~~d~~~~~~vnv~~~~----~Ll~Aa~~ag 77 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|.... . ..++...+++|+.+.. +++..+++.+
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK12823 56 GEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG 135 (260)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 357789999999887766554 68999999985321 0 1112223456666555 4555555667
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-------Cc-c
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-------ET-H 142 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-------~~-~ 142 (404)
..+||++||...+... ...|+.+|..++.+++. .|+.++.|+||+++++..... .. .
T Consensus 136 ~g~iv~~sS~~~~~~~--------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 207 (260)
T PRK12823 136 GGAIVNVSSIATRGIN--------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEK 207 (260)
T ss_pred CCeEEEEcCccccCCC--------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhcccccccc
Confidence 7799999998654321 24699999999987763 489999999999998631100 00 0
Q ss_pred cE-----EEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 143 NI-----TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 143 ~i-----~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.. ...........+.+.+|||++++.++.+.. +..++++++.+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 208 AWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred ccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 00 000011122335688999999999987643 2346788887664
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.5e-08 Score=93.87 Aligned_cols=151 Identities=17% Similarity=0.116 Sum_probs=103.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC----C---CCcchhhHHHHHHHHHHHHHh---CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF----D---ITGPYRIDFQATKNLVDAATI---AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~----d---~~~~~~vnv~~~~~Ll~Aa~~---agV 78 (404)
.++.++.+|+.|.+.+..+++ ++|+||||+|....... + +...+++|+.+..++++.+.. .+.
T Consensus 50 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 129 (263)
T PRK06181 50 GEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR 129 (263)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 368899999999988877664 68999999987543211 1 123367899999999888753 234
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~~ 149 (404)
.+||++||...+... .....|+.+|..+|.+++. .++.++++|||++........ ..+. .....
T Consensus 130 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~-~~~~~ 202 (263)
T PRK06181 130 GQIVVVSSLAGLTGV------PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGK-PLGKS 202 (263)
T ss_pred CEEEEEecccccCCC------CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccc-ccccc
Confidence 689999997664322 2235799999998887752 589999999999876432210 1111 11111
Q ss_pred CccccCcccHHHHHHHHHHHHhCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~ 173 (404)
......+++.+|+|++++.++...
T Consensus 203 ~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 203 PMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred cccccCCCCHHHHHHHHHHHhhCC
Confidence 111235799999999999999753
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.5e-08 Score=95.54 Aligned_cols=165 Identities=11% Similarity=0.047 Sum_probs=111.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|+.|.+++.++++ .+|+||||+|...... .++...+++|+.+..++++++. +.+.
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 127 (252)
T PRK08220 48 YPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRS 127 (252)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence 468899999999998887765 4899999999753211 1233446788888888887764 3455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cc---ccEEE-
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET---HNITL- 146 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~---~~i~~- 146 (404)
.+||++||.+..... ..+..|+.+|..++.+++. .|+.+++||||.++++..... .. ....+
T Consensus 128 g~iv~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~ 201 (252)
T PRK08220 128 GAIVTVGSNAAHVPR------IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIA 201 (252)
T ss_pred CEEEEECCchhccCC------CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhh
Confidence 689999998654322 2246799999999887752 589999999999988643210 00 00000
Q ss_pred -----ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 -----SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 -----~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+..+++.+|||++++.++.+.. ...++++.+.++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg 247 (252)
T PRK08220 202 GFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGG 247 (252)
T ss_pred hHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence 0111223457899999999999997543 334566666665
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.3e-08 Score=93.88 Aligned_cols=147 Identities=15% Similarity=0.078 Sum_probs=101.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++..+++ ++|+|||++|...... .++...+.+|+.+..++++++ ++.+.
T Consensus 55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 134 (241)
T PRK07454 55 VKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGG 134 (241)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988877654 5899999999753211 123334567777766665554 55566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||...+... .....|+.+|..++.+.+. .|+.+++||||++..+.... ...... .
T Consensus 135 ~~iv~isS~~~~~~~------~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~---~~~~~~---~ 202 (241)
T PRK07454 135 GLIINVSSIAARNAF------PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT---ETVQAD---F 202 (241)
T ss_pred cEEEEEccHHhCcCC------CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc---cccccc---c
Confidence 799999998765432 2245799999998877652 58999999999987643210 011100 0
Q ss_pred cccCcccHHHHHHHHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
....++..+|+|++++.++.++.
T Consensus 203 ~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 203 DRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred ccccCCCHHHHHHHHHHHHcCCc
Confidence 11246899999999999998775
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.2e-08 Score=95.62 Aligned_cols=165 Identities=13% Similarity=0.082 Sum_probs=106.6
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|+.|.+++..++ .++|+||||+|..... ..++...+++|+.+..++++++. +.+.
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 131 (245)
T PRK12936 52 ERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRY 131 (245)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCC
Confidence 36889999999998887664 4689999999975321 12334456788888888777654 3456
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCcc-CcccEEEccCC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQED 150 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~~~ 150 (404)
.+||++||....... .....|+.+|..++.+++ ..|+.++.|+||++........ ....... ...
T Consensus 132 ~~iv~~sS~~~~~~~------~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~-~~~ 204 (245)
T PRK12936 132 GRIINITSVVGVTGN------PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAI-MGA 204 (245)
T ss_pred CEEEEECCHHhCcCC------CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHH-hcC
Confidence 799999997543221 112458888886665554 2589999999999865422110 0000000 011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.....+.+.+|++++++.++.+.. ...++++++.++.
T Consensus 205 ~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 205 IPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred CCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 122335689999999999886543 2347788887763
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.2e-08 Score=96.93 Aligned_cols=166 Identities=16% Similarity=0.096 Sum_probs=109.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----C-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----g- 77 (404)
.++.++.+|+.|.+++..+++ .+|+|||++|...... .++...+.+|+.+..+|++++... +
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 131 (256)
T PRK12743 52 VRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ 131 (256)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 368899999999988776653 6899999999753211 123344678999999998877542 2
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
-.+||++||....... .....|+.+|..++.+++. .|+.++.|+||+++.+................
T Consensus 132 ~g~ii~isS~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~ 205 (256)
T PRK12743 132 GGRIINITSVHEHTPL------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPG 205 (256)
T ss_pred CeEEEEEeeccccCCC------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhc
Confidence 2489999997653322 2346899999999887753 57999999999998753321100000000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~ 187 (404)
.....+.+.+|||+++..++..... ..+.++.+.++.
T Consensus 206 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 206 IPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred CCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 1122356899999999999875432 235666666654
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.7e-08 Score=94.49 Aligned_cols=166 Identities=13% Similarity=0.047 Sum_probs=106.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHH----HHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKN----LVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~----Ll~Aa~~agV 78 (404)
.++.++.+|+.|.+++..+++ .+|+|||++|...... .++...+++|+.+... ++..+++.++
T Consensus 50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 129 (242)
T TIGR01829 50 FDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGW 129 (242)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988766553 6899999998753211 1223335677777666 4555566778
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|..+|...+.+++. .|+.+++++||++.++.........+.......
T Consensus 130 ~~iv~iss~~~~~~~------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~ 203 (242)
T TIGR01829 130 GRIINISSVNGQKGQ------FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQI 203 (242)
T ss_pred cEEEEEcchhhcCCC------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcC
Confidence 899999997543221 1235688999877766542 589999999999986533211000000011111
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+...+|+++++..++.+. ....++++.+.++.
T Consensus 204 ~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 204 PVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL 240 (242)
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 2234567899999998888654 33457788877763
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.6e-08 Score=94.82 Aligned_cols=165 Identities=12% Similarity=0.038 Sum_probs=109.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+..++++++.+. ...+
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 134 (245)
T PRK12937 55 GRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGR 134 (245)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcE
Confidence 468899999999988887765 6899999999753211 122334678888998988877653 2358
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccEEEccCCcc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTL 152 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i~~~~~~~~ 152 (404)
||++||.+..... .....|+.+|..++.+++. .|+.+++++||++..+....... ..+........
T Consensus 135 iv~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~ 208 (245)
T PRK12937 135 IINLSTSVIALPL------PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAP 208 (245)
T ss_pred EEEEeeccccCCC------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCC
Confidence 9999987654321 2245799999999988763 57899999999986542110000 00000001112
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
+..+.+.+|+|++++.++.+.. +..++++++.++
T Consensus 209 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 209 LERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred CCCCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence 2345689999999999997643 234667776554
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.1e-08 Score=91.53 Aligned_cols=162 Identities=14% Similarity=0.096 Sum_probs=104.8
Q ss_pred eEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHH----HHHhCCCCEE
Q 015570 18 LELVECDLEKRVQIEPALG------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVD----AATIAKVNHF 81 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~----Aa~~agVkrf 81 (404)
.+++.+|+.|.+++.+++. ++|+||||+|...... .++...+.+|+.+..++++ ++++.+..+|
T Consensus 43 ~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 122 (234)
T PRK07577 43 GELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRI 122 (234)
T ss_pred ceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEE
Confidence 3689999999988877665 6899999999754321 1222345667777666544 4455677899
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEE---ccCCc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL---SQEDT 151 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~---~~~~~ 151 (404)
|++||.+.+... ....|+.+|..+|.+++. .|+.+++||||++..+............ .....
T Consensus 123 v~~sS~~~~~~~-------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~ 195 (234)
T PRK07577 123 VNICSRAIFGAL-------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI 195 (234)
T ss_pred EEEccccccCCC-------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC
Confidence 999998654321 236799999998877653 5899999999999765322110000000 00011
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
........+|+|++++.++.+.. ...++.+.+.++
T Consensus 196 ~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~ 231 (234)
T PRK07577 196 PMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGG 231 (234)
T ss_pred CCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCC
Confidence 11224578999999999997653 234566766554
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.8e-08 Score=94.49 Aligned_cols=163 Identities=11% Similarity=0.067 Sum_probs=108.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA----KV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a----gV 78 (404)
.+++++.+|++|.+++.++++ ++|+||||+|..... ..++...+++|+.+..+|++++... +.
T Consensus 59 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 138 (258)
T PRK09134 59 RRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADAR 138 (258)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988877664 579999999975321 1123445788999999998877653 33
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
.++|++++....... ..+..|+.+|..+|.+.+. .++.+++|+||+++...... ...+........
T Consensus 139 ~~iv~~~s~~~~~~~------p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--~~~~~~~~~~~~ 210 (258)
T PRK09134 139 GLVVNMIDQRVWNLN------PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS--PEDFARQHAATP 210 (258)
T ss_pred ceEEEECchhhcCCC------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC--hHHHHHHHhcCC
Confidence 578888775443221 1235799999988877763 24889999999986532110 000000001112
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
.+...+.+|+|++++.+++.+. ..++.|.+.++.
T Consensus 211 ~~~~~~~~d~a~~~~~~~~~~~-~~g~~~~i~gg~ 244 (258)
T PRK09134 211 LGRGSTPEEIAAAVRYLLDAPS-VTGQMIAVDGGQ 244 (258)
T ss_pred CCCCcCHHHHHHHHHHHhcCCC-cCCCEEEECCCe
Confidence 2345789999999999998654 457788877765
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.3e-08 Score=94.75 Aligned_cols=143 Identities=14% Similarity=-0.011 Sum_probs=98.4
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
+++++.+|+.|.+++..++ .++|+|||++|....... ++...+++|+.+..++++++ .+.+..
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g 130 (273)
T PRK07825 51 LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRG 130 (273)
T ss_pred cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5889999999998876554 468999999997643211 12234567887777755554 556778
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||.+..... .....|+.+|..++.+.+ ..|+.+++||||++....... . ....
T Consensus 131 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~--~-------~~~~ 195 (273)
T PRK07825 131 HVVNVASLAGKIPV------PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAG--T-------GGAK 195 (273)
T ss_pred EEEEEcCccccCCC------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcc--c-------cccc
Confidence 99999998654321 224578999987765443 368999999999986532110 0 0111
Q ss_pred ccCcccHHHHHHHHHHHHhCCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...+++.+|+|++++.++.++.
T Consensus 196 ~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 196 GFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred CCCCCCHHHHHHHHHHHHhCCC
Confidence 2246899999999999998765
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.2e-08 Score=93.22 Aligned_cols=165 Identities=13% Similarity=0.027 Sum_probs=112.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 86 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS 86 (404)
.+++++.+|+.|.+++.++++ .+|++||++|..... ..++...+++|+.+..+++++....+..+||++||
T Consensus 45 ~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss 124 (230)
T PRK07041 45 APVRTAALDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSG 124 (230)
T ss_pred CceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECc
Confidence 468899999999999988876 479999999975322 11234456788999999999766666789999999
Q ss_pred CcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCcc-Ccc---cEEEccCCccccCcc
Q 015570 87 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYK-ETH---NITLSQEDTLFGGQV 157 (404)
Q Consensus 87 ~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~-~~~---~i~~~~~~~~~~~~I 157 (404)
.+.+... .....|+.+|..++.+++. .++.++.++||++..+..... ... .+.........+...
T Consensus 125 ~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (230)
T PRK07041 125 FAAVRPS------ASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVG 198 (230)
T ss_pred hhhcCCC------CcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCc
Confidence 8775432 2345799999999988874 357889999998754321100 000 000000011112345
Q ss_pred cHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 158 SNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 158 s~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
..+|||++++.++.+.. ..+++|++.++.
T Consensus 199 ~~~dva~~~~~l~~~~~-~~G~~~~v~gg~ 227 (230)
T PRK07041 199 QPEDVANAILFLAANGF-TTGSTVLVDGGH 227 (230)
T ss_pred CHHHHHHHHHHHhcCCC-cCCcEEEeCCCe
Confidence 78999999999997643 457888887764
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.3e-08 Score=94.69 Aligned_cols=151 Identities=15% Similarity=0.050 Sum_probs=99.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC-C
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-V 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag-V 78 (404)
++.++.+|++|.+++.++++ .+|+|||++|...... .++...+++|+.+..++++++. +.+ .
T Consensus 56 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~ 135 (275)
T PRK05876 56 DVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTG 135 (275)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence 57889999999988877654 5799999999743211 1223345788888888888764 344 4
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH----H---CCCCEEEEEcCccCCCCCCccCc-ccE------
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A---SGLPYTIVRPGGMERPTDAYKET-HNI------ 144 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~----~---~gl~~tIlRpg~~~G~~~~~~~~-~~i------ 144 (404)
.+||++||....... .....|+.+|..++.+.+ + .|+.+++|+||++.++....... ...
T Consensus 136 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 209 (275)
T PRK05876 136 GHVVFTASFAGLVPN------AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSS 209 (275)
T ss_pred CEEEEeCChhhccCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccc
Confidence 689999998654321 234579999987544333 2 58999999999997653221100 000
Q ss_pred --EEccCCccccCcccHHHHHHHHHHHHhCC
Q 015570 145 --TLSQEDTLFGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 145 --~~~~~~~~~~~~Is~~DVA~ai~~~l~~~ 173 (404)
...........+++.+|||+.++.++.+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~ 240 (275)
T PRK05876 210 TTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 (275)
T ss_pred cccccccccccccCCCHHHHHHHHHHHHHcC
Confidence 01111112234789999999999999754
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.7e-08 Score=95.74 Aligned_cols=166 Identities=8% Similarity=-0.008 Sum_probs=107.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|++|.+++..++. .+|+|||++|...... .++...+++|+.++.++++++. +.+.
T Consensus 53 ~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 132 (259)
T PRK12384 53 GMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI 132 (259)
T ss_pred ceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC
Confidence 458999999999988776653 6899999998653211 1223345778888776666554 3453
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcc--------
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-------- 142 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~-------- 142 (404)
.+||++||....... .....|+.+|..++.+++ ..|+.+.+||||.+++.........
T Consensus 133 ~~~iv~~ss~~~~~~~------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~ 206 (259)
T PRK12384 133 QGRIIQINSKSGKVGS------KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGI 206 (259)
T ss_pred CcEEEEecCcccccCC------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCC
Confidence 589999886432111 123579999998877664 2689999999998876422110000
Q ss_pred ----cEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 143 ----NITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 143 ----~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...........+.+++.+||+++++.++.+.. ...+++|++.++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~ 256 (259)
T PRK12384 207 KPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQ 256 (259)
T ss_pred ChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCE
Confidence 00011112233457899999999999987543 2347889988875
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.3e-08 Score=96.46 Aligned_cols=165 Identities=13% Similarity=0.035 Sum_probs=109.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHHHhC---CC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIA---KV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa~~a---gV 78 (404)
.+++++.+|++|.+++..++ .++|+|||++|.... . ..++...+++|+.+...+++++... ..
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 133 (258)
T PRK07890 54 RRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG 133 (258)
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC
Confidence 46789999999998877655 368999999987422 1 1123344678888899998888652 22
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-----cc---
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HN--- 143 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-----~~--- 143 (404)
.+||++||....... ..+..|..+|..++.+++. .++.+++||||+++++....... ..
T Consensus 134 ~~ii~~sS~~~~~~~------~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~ 207 (258)
T PRK07890 134 GSIVMINSMVLRHSQ------PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTV 207 (258)
T ss_pred CEEEEEechhhccCC------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCH
Confidence 589999998654321 2345799999999887763 48999999999999864311000 00
Q ss_pred ---EEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 144 ---ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 144 ---i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
+...........++..+|||++++.++.+.. ...++++.+.++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg 254 (258)
T PRK07890 208 EQIYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCG 254 (258)
T ss_pred HHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence 0000011122346788999999999887532 234566655554
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.1e-08 Score=94.53 Aligned_cols=165 Identities=12% Similarity=0.039 Sum_probs=109.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------C-CCEEEEcCcCCCC-------CC-----CCCCcchhhHHHHHHHHHHHHH-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------N-ASVVICCIGASEK-------EV-----FDITGPYRIDFQATKNLVDAAT- 74 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------g-vDvVI~~ag~~~~-------~~-----~d~~~~~~vnv~~~~~Ll~Aa~- 74 (404)
.++.++.+|+.|.+++.++++ + +|+|||++|.... .. .++...+++|+.+..++++++.
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (253)
T PRK08642 52 DRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALP 131 (253)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 468899999999988877664 2 8999999986311 00 1122346788888888888875
Q ss_pred ---hCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cccc
Q 015570 75 ---IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHN 143 (404)
Q Consensus 75 ---~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~ 143 (404)
+.+..+||++||...... ...+..|+.+|..+|.+++. .|+.+..|+||++..+..... ....
T Consensus 132 ~~~~~~~g~iv~iss~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~ 205 (253)
T PRK08642 132 GMREQGFGRIINIGTNLFQNP------VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEV 205 (253)
T ss_pred HHHhcCCeEEEEECCccccCC------CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHH
Confidence 345579999998654322 12345799999999998874 478899999999865321110 0000
Q ss_pred EEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 144 ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 144 i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
..........+.+.+.+|||++++.++... ....|.++.+.++
T Consensus 206 ~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 206 FDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred HHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 000011122345789999999999999754 3344666766555
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.2e-08 Score=95.06 Aligned_cols=166 Identities=13% Similarity=0.036 Sum_probs=109.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHHHh---CCCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAATI---AKVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa~~---agVkr 80 (404)
.++.++.+|+.|.+++..+++ ++|+|||++|...... .++...+.+|+.+..++++++.. .+..+
T Consensus 55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 134 (258)
T PRK08628 55 PRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGA 134 (258)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcE
Confidence 468899999999998887764 6899999999643211 12233456788888887776643 23468
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-cCc-cc----EE-E
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KET-HN----IT-L 146 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~~~-~~----i~-~ 146 (404)
||++||....... ..+..|+.+|..+|.+++. .|+.++.||||.++++.... ... .. .. +
T Consensus 135 iv~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~ 208 (258)
T PRK08628 135 IVNISSKTALTGQ------GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAI 208 (258)
T ss_pred EEEECCHHhccCC------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHH
Confidence 9999997654321 2345799999999888863 47999999999998863211 000 00 00 0
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.........++..+|||++++.++.... ...++.+.+.++.
T Consensus 209 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 250 (258)
T PRK08628 209 TAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY 250 (258)
T ss_pred HhcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence 0000111246789999999999997643 2346677766554
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.6e-08 Score=92.39 Aligned_cols=153 Identities=13% Similarity=0.074 Sum_probs=102.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--------CCCEEEEcCcCCCCCCC------CCCcchhhHHHH----HHHHHHHHHhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG--------NASVVICCIGASEKEVF------DITGPYRIDFQA----TKNLVDAATIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~----~~~Ll~Aa~~ag 77 (404)
.+++++.+|++|.+++..+++ ++|+|||++|....... ++...+++|+.+ ++++++.+++.+
T Consensus 47 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~ 126 (277)
T PRK05993 47 EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG 126 (277)
T ss_pred CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC
Confidence 368899999999988776553 57999999987543211 122346788877 667788888888
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCc---ccEEEc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET---HNITLS 147 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~---~~i~~~ 147 (404)
..+||++||....... .....|+.+|..+|.+.+ ..|+.+++||||++..+....... ..+...
T Consensus 127 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~ 200 (277)
T PRK05993 127 QGRIVQCSSILGLVPM------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIE 200 (277)
T ss_pred CCEEEEECChhhcCCC------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccc
Confidence 8899999997553321 234679999999998765 368999999999986542211000 000000
Q ss_pred ----------------cCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 148 ----------------QEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 148 ----------------~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.........++.++||+.++.++....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~~ 243 (277)
T PRK05993 201 NSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAPR 243 (277)
T ss_pred cchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCCC
Confidence 000001123689999999999998665
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.7e-08 Score=94.43 Aligned_cols=165 Identities=10% Similarity=0.088 Sum_probs=109.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC--------CCCCCcchhhHHHHHHHHHHHHHh---CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATI---AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~--------~~d~~~~~~vnv~~~~~Ll~Aa~~---ag 77 (404)
.++.++.+|+.|.+++..+++ .+|+|||++|..... ..++...+++|+.+..++++++.. ..
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (255)
T PRK05717 56 ENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH 135 (255)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 357899999999988765443 589999999975321 112335678999999999999863 22
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccE-EEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i-~~~~~~ 150 (404)
..+||++||....... ..+..|+.+|..++.+++. .++.+..|+||++.++.........+ ......
T Consensus 136 ~g~ii~~sS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~ 209 (255)
T PRK05717 136 NGAIVNLASTRARQSE------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQ 209 (255)
T ss_pred CcEEEEEcchhhcCCC------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhc
Confidence 3589999987654321 1235699999999988863 35889999999998753221100000 000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...+...+.+|||+++..++.+.. +..++++.+.++
T Consensus 210 ~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 246 (255)
T PRK05717 210 HPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGG 246 (255)
T ss_pred CCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence 122346789999999999886542 234677776554
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.3e-08 Score=94.31 Aligned_cols=166 Identities=11% Similarity=0.094 Sum_probs=110.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC--------CCCCCcchhhHHHHHHHHHHHHHh----C
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATI----A 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~--------~~d~~~~~~vnv~~~~~Ll~Aa~~----a 76 (404)
.+++++.+|+.|.+++.+++. ++|+|||++|..... ..++...+++|+.+..++++++.. .
T Consensus 66 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 145 (280)
T PLN02253 66 PNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL 145 (280)
T ss_pred CceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 468999999999988887765 689999999875321 112344578899999888887753 3
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--Cc----cc
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ET----HN 143 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~----~~ 143 (404)
+..++|++||........ ....|+.+|..+|.+.+. .|+.+..|+||++........ .. ..
T Consensus 146 ~~g~ii~isS~~~~~~~~------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~ 219 (280)
T PLN02253 146 KKGSIVSLCSVASAIGGL------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDA 219 (280)
T ss_pred CCceEEEecChhhcccCC------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhh
Confidence 345789998875522110 124699999999988863 479999999999876432100 00 00
Q ss_pred E---E-Ecc-CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 144 I---T-LSQ-EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 144 i---~-~~~-~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+ . ... .....+..++.+|||++++.++.+.. +..++++.+.++.
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~ 269 (280)
T PLN02253 220 LAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGF 269 (280)
T ss_pred hhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCch
Confidence 0 0 000 11111234789999999999987543 2346788887764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.6e-08 Score=94.61 Aligned_cols=169 Identities=13% Similarity=0.004 Sum_probs=109.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC-----C
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA-----K 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a-----g 77 (404)
.++.++.+|++|.+++..++ .++|+||||+|...... .++...+++|+.+..++++++... +
T Consensus 61 ~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~ 140 (259)
T PRK08213 61 IDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG 140 (259)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC
Confidence 46788999999998886554 36899999998642211 112234568999999999987554 6
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
..+||++||.+....... .......|..+|..+|.+++. .|+.+.+++||++..+................
T Consensus 141 ~~~~v~~sS~~~~~~~~~--~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~ 218 (259)
T PRK08213 141 YGRIINVASVAGLGGNPP--EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAH 218 (259)
T ss_pred CeEEEEECChhhccCCCc--cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhc
Confidence 679999999755322111 012346799999999988763 47999999999986543211000000000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.....+...+|||++++.++.... ...|+++.+.++
T Consensus 219 ~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 219 TPLGRLGDDEDLKGAALLLASDASKHITGQILAVDGG 255 (259)
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 111234578999999999886643 334677776655
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-07 Score=90.06 Aligned_cols=153 Identities=12% Similarity=0.090 Sum_probs=99.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHH----HHHHHHhCCCCEEEEe
Q 015570 16 EMLELVECDLEKRVQIEPALG-NASVVICCIGASEKEVF------DITGPYRIDFQATKN----LVDAATIAKVNHFIMV 84 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~----Ll~Aa~~agVkrfI~v 84 (404)
.+++++.+|+.|.+.+..++. ++|+||||+|....... ++...+.+|+.+..+ ++..+++.+.++||++
T Consensus 51 ~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ 130 (257)
T PRK09291 51 LALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFT 130 (257)
T ss_pred CcceEEEeeCCCHHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 368999999999999999887 89999999997532211 112234566665544 4555666777899999
Q ss_pred ccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCcc-C-cccEE------Ec-c
Q 015570 85 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E-THNIT------LS-Q 148 (404)
Q Consensus 85 SS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~-~-~~~i~------~~-~ 148 (404)
||.+..... .....|+.+|..+|.+.+ ..|+.+++||||+|........ . ...+. +. .
T Consensus 131 SS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 204 (257)
T PRK09291 131 SSMAGLITG------PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPE 204 (257)
T ss_pred cChhhccCC------CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhh
Confidence 997543221 123579999999987654 3699999999999854321100 0 00000 00 0
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
......+.+..+|+++.++.++.++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (257)
T PRK09291 205 DLAFPLEQFDPQEMIDAMVEVIPADT 230 (257)
T ss_pred hhhccccCCCHHHHHHHHHHHhcCCC
Confidence 01112245788999999999887654
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.8e-08 Score=94.55 Aligned_cols=166 Identities=11% Similarity=0.042 Sum_probs=104.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC--CC-----CCCcchhhHHHHHHHHHHHHHhC-----
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE--VF-----DITGPYRIDFQATKNLVDAATIA----- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~--~~-----d~~~~~~vnv~~~~~Ll~Aa~~a----- 76 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|..... .. ++...+.+|+.+..++++++...
T Consensus 51 ~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 130 (247)
T PRK09730 51 GKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKH 130 (247)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 357889999999998887665 568999999974211 11 12245678888887776655432
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEE-
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL- 146 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~- 146 (404)
+..+||++||.+...... ..+..|+.+|..+|.+++. .|+.+++||||+++++............
T Consensus 131 ~~~~g~~v~~sS~~~~~~~~-----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~ 205 (247)
T PRK09730 131 GGSGGAIVNVSSAASRLGAP-----GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDR 205 (247)
T ss_pred CCCCcEEEEECchhhccCCC-----CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHH
Confidence 124799999976533211 1123599999998877652 5899999999999987432111000000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+....+.+|+|++++.++.+.. ...+..+++.++
T Consensus 206 ~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 206 VKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred HHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence 0001111123488999999999887542 233556666553
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.5e-08 Score=93.74 Aligned_cols=167 Identities=18% Similarity=0.131 Sum_probs=109.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC--------CCCCCCcchhhHHHHHHHHHHH----HHhC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDA----ATIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~--------~~~d~~~~~~vnv~~~~~Ll~A----a~~a 76 (404)
.++.++.+|+.|.+.+..++ .++|+|||++|.... ...++...+++|+.+..+++++ +++.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 128 (260)
T PRK06523 49 EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR 128 (260)
T ss_pred CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 46889999999998776543 478999999995421 1122344567888887666544 4555
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-----cccE
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----THNI 144 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-----~~~i 144 (404)
+..+||++||....... ...+..|+.+|..++.+++. .|+.+.+|+||++..+...... ....
T Consensus 129 ~~g~ii~isS~~~~~~~-----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~ 203 (260)
T PRK06523 129 GSGVIIHVTSIQRRLPL-----PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGT 203 (260)
T ss_pred CCcEEEEEecccccCCC-----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCC
Confidence 66789999998664321 11346799999999877653 5899999999999876421100 0000
Q ss_pred EE---------ccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 145 TL---------SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 145 ~~---------~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.. .......+.+...+|||++++.++.+. ....++++.+.++.
T Consensus 204 ~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~ 256 (260)
T PRK06523 204 DYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGT 256 (260)
T ss_pred CHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCc
Confidence 00 001112233568899999999999764 33446778777764
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-08 Score=107.37 Aligned_cols=167 Identities=14% Similarity=0.145 Sum_probs=113.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||++|..... ..++...+.+|+.+..++++++. +.+.
T Consensus 470 ~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~ 549 (681)
T PRK08324 470 DRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL 549 (681)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 478899999999988877664 789999999975322 11233456788888888866664 4454
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccC-CCCCCccC-------cc
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKE-------TH 142 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~-G~~~~~~~-------~~ 142 (404)
.+||++||..+.... ..+..|+.+|..++.+++. .|+.+++|+|+++| +....... ..
T Consensus 550 ~g~iV~vsS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~ 623 (681)
T PRK08324 550 GGSIVFIASKNAVNPG------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAY 623 (681)
T ss_pred CcEEEEECCccccCCC------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhc
Confidence 689999997654322 1246799999999988864 47999999999997 32211000 00
Q ss_pred cEE------EccCCccccCcccHHHHHHHHHHHHhC-CCCCCCcEEEEEcCCC
Q 015570 143 NIT------LSQEDTLFGGQVSNLQVAELLACMAKN-RSLSYCKVVEVIAETT 188 (404)
Q Consensus 143 ~i~------~~~~~~~~~~~Is~~DVA~ai~~~l~~-~~~~~~~i~nI~~~~~ 188 (404)
.+. ....+...+.+++.+|||++++.++.. .....++++++.++..
T Consensus 624 g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 624 GLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred cCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence 000 111223344679999999999999852 2334578999988753
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-08 Score=96.12 Aligned_cols=166 Identities=11% Similarity=0.045 Sum_probs=111.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC--C-----CCCCcchhhHHHHHHHHHHHHHhC--CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE--V-----FDITGPYRIDFQATKNLVDAATIA--KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~--~-----~d~~~~~~vnv~~~~~Ll~Aa~~a--gVk 79 (404)
.++.++.+|+.|.+.+..+++ ++|+|||++|..... . .++...+++|+.+..++++++... ...
T Consensus 96 ~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g 175 (290)
T PRK06701 96 VKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGS 175 (290)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCC
Confidence 357889999999988877653 689999999974211 1 122345778999999999988652 235
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccEEEccCCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDT 151 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i~~~~~~~ 151 (404)
+||++||...+.... ....|..+|..++.+++. .|+.++.||||+++.+....... ..+.......
T Consensus 176 ~iV~isS~~~~~~~~------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK06701 176 AIINTGSITGYEGNE------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNT 249 (290)
T ss_pred eEEEEecccccCCCC------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcC
Confidence 899999987654321 124699999998877753 48999999999998753211000 0000001112
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.++.... ...+.++++.++.
T Consensus 250 ~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 250 PMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred CcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence 23457889999999999997643 2346777776653
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.7e-08 Score=95.38 Aligned_cols=165 Identities=16% Similarity=0.094 Sum_probs=110.6
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-------CCCCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-------~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
++.++.+|+.|.+++..++ .++|++||++|.... ...++...+++|+.+...+++++... .-.+
T Consensus 101 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~ 180 (294)
T PRK07985 101 KAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGAS 180 (294)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCE
Confidence 5778999999998776554 368999999986421 11234455789999999999888652 1258
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEccCCc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDT 151 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~~~~ 151 (404)
||++||..++... ..+..|+.+|..++.+.+. .|+.+.+|+||+++++..... ....+.......
T Consensus 181 iv~iSS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~ 254 (294)
T PRK07985 181 IITTSSIQAYQPS------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQT 254 (294)
T ss_pred EEEECCchhccCC------CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccC
Confidence 9999998765432 1235799999999877752 589999999999987642110 000000001111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+...+|||++++.++.+.. +..+.++.+.++.
T Consensus 255 ~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 255 PMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred CCCCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence 22346789999999999997643 3346777766653
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=9.6e-08 Score=91.50 Aligned_cols=153 Identities=11% Similarity=0.041 Sum_probs=99.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHH----HHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNL----VDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~L----l~Aa~~agV 78 (404)
.++.++.+|+.|.+++..+++ ++|+|||++|....... ++...+++|+.+..++ +..+++.+.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 128 (270)
T PRK05650 49 GDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKS 128 (270)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC
Confidence 468889999999988776654 78999999997643211 1222346776665554 444566777
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccE--EEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i--~~~~~ 149 (404)
.+||++||....... .....|+.+|...+.+.+ ..|+.+++|+||++..+.......... .....
T Consensus 129 ~~iv~vsS~~~~~~~------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 202 (270)
T PRK05650 129 GRIVNIASMAGLMQG------PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVG 202 (270)
T ss_pred CEEEEECChhhcCCC------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHH
Confidence 899999998654321 224579999998766654 258999999999997653221100000 00000
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
......+++.+|+|+.++.++.+..
T Consensus 203 ~~~~~~~~~~~~vA~~i~~~l~~~~ 227 (270)
T PRK05650 203 KLLEKSPITAADIADYIYQQVAKGE 227 (270)
T ss_pred HHhhcCCCCHHHHHHHHHHHHhCCC
Confidence 1112346899999999999998643
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.6e-08 Score=92.55 Aligned_cols=166 Identities=10% Similarity=0.015 Sum_probs=110.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|+.+.+++..++. ++|+|||++|...... .++...+.+|+.+..++++++.. .+.
T Consensus 61 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 140 (255)
T PRK06841 61 GNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGG 140 (255)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC
Confidence 356789999999988876654 6899999999753211 12233567888898888887754 466
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEEccCC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQED 150 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~~~ 150 (404)
.+||++||.+..... .....|+.+|...+.+.+. .|+.++.|+||++........ ...........
T Consensus 141 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 214 (255)
T PRK06841 141 GKIVNLASQAGVVAL------ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL 214 (255)
T ss_pred ceEEEEcchhhccCC------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc
Confidence 799999997653221 1235799999988877753 589999999999976532110 00000000111
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.....+.+.+|+|++++.++.... ...|+++.+.++.
T Consensus 215 ~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 215 IPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGY 252 (255)
T ss_pred CCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 223457899999999999997643 2346777776653
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=9.7e-08 Score=90.99 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=97.0
Q ss_pred CeEEEEcCCCCHhhHHHHh------CCCCEEEEcCcCCCCCCCCCCc------chhhHHHHHHH----HHHHHHhCCCCE
Q 015570 17 MLELVECDLEKRVQIEPAL------GNASVVICCIGASEKEVFDITG------PYRIDFQATKN----LVDAATIAKVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL------~gvDvVI~~ag~~~~~~~d~~~------~~~vnv~~~~~----Ll~Aa~~agVkr 80 (404)
+++++.+|+.|.+++.+++ .++|++||++|........+.. .+++|+.+... +++++++.+..+
T Consensus 61 ~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~ 140 (253)
T PRK07904 61 SVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQ 140 (253)
T ss_pred ceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCce
Confidence 6899999999988755443 2799999999875332222221 35777766654 677778778889
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHH-------HHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 153 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l-------~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~ 153 (404)
||++||....... .....|+.+|..+..+. +..|+.+++||||++..+.... ... .
T Consensus 141 iv~isS~~g~~~~------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~---------~~~--~ 203 (253)
T PRK07904 141 IIAMSSVAGERVR------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH---------AKE--A 203 (253)
T ss_pred EEEEechhhcCCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc---------CCC--C
Confidence 9999998643211 12245888998776443 3468999999999997542210 000 1
Q ss_pred cCcccHHHHHHHHHHHHhCCC
Q 015570 154 GGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...+..+|+|+.++.++.+..
T Consensus 204 ~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 204 PLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred CCCCCHHHHHHHHHHHHHcCC
Confidence 235799999999999998655
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.4e-08 Score=93.94 Aligned_cols=164 Identities=11% Similarity=0.059 Sum_probs=105.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC---------------CCCCcchhhHHHHHHHHHHHH
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV---------------FDITGPYRIDFQATKNLVDAA 73 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~---------------~d~~~~~~vnv~~~~~Ll~Aa 73 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+..++++++
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 133 (253)
T PRK08217 54 TEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREA 133 (253)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 467889999999887765543 5799999999643211 111223467777777665443
Q ss_pred H----hC-CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc
Q 015570 74 T----IA-KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET 141 (404)
Q Consensus 74 ~----~a-gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~ 141 (404)
. +. +-.+||++|+.+.++.. ....|+.+|..+|.+++. .|+.++.|+||++.++.......
T Consensus 134 ~~~l~~~~~~~~iv~~ss~~~~~~~-------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~ 206 (253)
T PRK08217 134 AAKMIESGSKGVIINISSIARAGNM-------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKP 206 (253)
T ss_pred HHHHHhcCCCeEEEEEccccccCCC-------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCH
Confidence 3 32 22478999987654322 246799999999887652 58999999999997654321110
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
............+.+.+.+|+|+++..++... ...+++|++.++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~-~~~g~~~~~~gg~ 251 (253)
T PRK08217 207 EALERLEKMIPVGRLGEPEEIAHTVRFIIEND-YVTGRVLEIDGGL 251 (253)
T ss_pred HHHHHHHhcCCcCCCcCHHHHHHHHHHHHcCC-CcCCcEEEeCCCc
Confidence 00000011112234578999999999999654 3467889888763
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1e-07 Score=90.47 Aligned_cols=162 Identities=16% Similarity=0.075 Sum_probs=107.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----KV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----gV 78 (404)
.+++++.+|+.|.+++..+++ .+|+|||++|...... .++...+.+|+.+...+++++... +.
T Consensus 67 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 146 (256)
T PRK12748 67 VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAG 146 (256)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC
Confidence 358999999999988766553 6899999998753211 112334678999999999887542 44
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+++. .|+.++.|+||.+............+. ...
T Consensus 147 ~~iv~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~---~~~ 217 (256)
T PRK12748 147 GRIINLTSGQSLGPM------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLV---PKF 217 (256)
T ss_pred eEEEEECCccccCCC------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhh---ccC
Confidence 689999997654321 1235799999999988653 589999999999865422100000010 011
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
....+...+|+|+++..++.... ...++++++.++
T Consensus 218 ~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 218 PQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred CCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 11234578999999998887643 233677777655
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=7.9e-08 Score=91.22 Aligned_cols=166 Identities=12% Similarity=0.085 Sum_probs=108.0
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHH----HHHHHHHHhCCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQAT----KNLVDAATIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~----~~Ll~Aa~~agVk 79 (404)
++.++.+|+.|.+++.++++ ++|+||||+|..... ..++...+++|+.+. +.+++.+++.+..
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g 131 (255)
T PRK06463 52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNG 131 (255)
T ss_pred CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc
Confidence 57899999999988877654 689999999875321 112334467888885 4455556555667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc----EE-Ec
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN----IT-LS 147 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~----i~-~~ 147 (404)
+||++||........ .....|+.+|..++.+++. .|+.+++|+||++..+......... +. ..
T Consensus 132 ~iv~isS~~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~ 206 (255)
T PRK06463 132 AIVNIASNAGIGTAA-----EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELF 206 (255)
T ss_pred EEEEEcCHHhCCCCC-----CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHH
Confidence 999999976543211 1235699999999887763 5899999999998543211000000 00 00
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
......+.+...+|+|++++.++.+.. ...++++.+.++.
T Consensus 207 ~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 207 RNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADGGR 247 (255)
T ss_pred HhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence 111223345789999999999987643 2346777776664
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.7e-08 Score=91.89 Aligned_cols=142 Identities=13% Similarity=0.045 Sum_probs=100.3
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-------CCCCcchhhHHHHHHHHHH----HHHhCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVD----AATIAKV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-------~d~~~~~~vnv~~~~~Ll~----Aa~~agV 78 (404)
++.++.+|++|.+++.++++ .+|+|||++|...... .++...+++|+.+..++++ ++++.+.
T Consensus 51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~ 130 (257)
T PRK07024 51 RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARR 130 (257)
T ss_pred eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCC
Confidence 78999999999988877654 4799999999753211 1123446788888888665 5566677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+++. .|+.+++||||++.++..... ..
T Consensus 131 ~~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~ 194 (257)
T PRK07024 131 GTLVGIASVAGVRGL------PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN----------PY 194 (257)
T ss_pred CEEEEEechhhcCCC------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC----------CC
Confidence 799999987653221 1235699999999887742 589999999999987532110 00
Q ss_pred cccCcccHHHHHHHHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
....++..+|+|+.++.++.+..
T Consensus 195 ~~~~~~~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 195 PMPFLMDADRFAARAARAIARGR 217 (257)
T ss_pred CCCCccCHHHHHHHHHHHHhCCC
Confidence 01124689999999999997644
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.78 E-value=7.6e-08 Score=90.67 Aligned_cols=165 Identities=13% Similarity=0.049 Sum_probs=108.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++.++.+|++|.+++..++ .++|+|||++|...... .++...+++|+.+..++++++.. .+
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 131 (248)
T TIGR01832 52 RRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR 131 (248)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 46889999999998887655 36899999999753211 12334467888888888887753 33
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE--Ecc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~--~~~ 148 (404)
..++|++||....... .....|..+|..++.+++. .|+.+++|+||++..+........... ...
T Consensus 132 ~g~iv~~sS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 205 (248)
T TIGR01832 132 GGKIINIASMLSFQGG------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAIL 205 (248)
T ss_pred CeEEEEEecHHhccCC------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHH
Confidence 4589999997654322 1234699999999888763 489999999999976532210000000 000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
.....+.+++.+|||++++.++...... .++++.+.++
T Consensus 206 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 206 ERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred hcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence 1112245789999999999999754322 3555554443
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.1e-08 Score=92.40 Aligned_cols=165 Identities=15% Similarity=0.111 Sum_probs=108.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|+.|.+++.++++ .+|+|||++|...... .++...+.+|+.+..++++++. +.+.
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 139 (256)
T PRK06124 60 GAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGY 139 (256)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 358899999999988876654 5699999999753211 1223346778888888775554 4677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccE-EEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i-~~~~~ 149 (404)
.+||++||....... .....|+.+|..++.+++. .|+.++.|+||++.++..... ....+ .....
T Consensus 140 ~~iv~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~ 213 (256)
T PRK06124 140 GRIIAITSIAGQVAR------AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQ 213 (256)
T ss_pred cEEEEEeechhccCC------CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHh
Confidence 899999997653321 1235799999988877653 489999999999987642110 00000 00011
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
....+.+++.+|++++++.++.+.... .++.+.+.++
T Consensus 214 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 214 RTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred cCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence 112345789999999999999875432 3555555443
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=7.3e-08 Score=92.03 Aligned_cols=167 Identities=16% Similarity=0.104 Sum_probs=110.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh-----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI-----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~-----ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||++|..... ..++...+.+|+.+..++++++.. .+
T Consensus 59 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 138 (263)
T PRK07814 59 RRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG 138 (263)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC
Confidence 468899999999998876654 789999999864321 122344567899999999998863 45
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccC-cccEE-EccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~-~~~i~-~~~~ 149 (404)
..+||++||.+..... .....|+.+|..++.+++. .++.++.|+||++......... ...+. ....
T Consensus 139 ~g~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~ 212 (263)
T PRK07814 139 GGSVINISSTMGRLAG------RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEK 212 (263)
T ss_pred CeEEEEEccccccCCC------CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHh
Confidence 5689999997553221 2245799999999988874 3578899999998643211100 00000 0000
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
..........+|+|++++.++.+. ....++.+.+.++..
T Consensus 213 ~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~ 252 (263)
T PRK07814 213 ATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLT 252 (263)
T ss_pred cCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCcc
Confidence 111223568899999999999764 233467777766543
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.3e-08 Score=92.03 Aligned_cols=165 Identities=14% Similarity=0.097 Sum_probs=108.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|+.|.+.+..+++ ++|++||++|..... ..++...+.+|+.+..++++++ ++.+.
T Consensus 63 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 142 (258)
T PRK06935 63 RKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGS 142 (258)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988877665 689999999975321 1123334567877766666544 45566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cE-EEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NI-TLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i-~~~~~ 149 (404)
.++|++||....... ..+..|+.+|..++.+++. .|+.+++|+||++..+........ .. .....
T Consensus 143 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~ 216 (258)
T PRK06935 143 GKIINIASMLSFQGG------KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILK 216 (258)
T ss_pred eEEEEECCHHhccCC------CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHh
Confidence 799999998664322 1235799999999888763 589999999999876432110000 00 00001
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
....+.+...+|||++++.++.+.. +..+.++.+.++
T Consensus 217 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 217 RIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred cCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 1122346788999999999887543 234667766655
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1e-07 Score=91.69 Aligned_cols=164 Identities=15% Similarity=0.043 Sum_probs=106.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC---------------------CCCCcchhhHHHHHHH
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV---------------------FDITGPYRIDFQATKN 68 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~---------------------~d~~~~~~vnv~~~~~ 68 (404)
++.++.+|+.|.+++..+++ ++|+|||++|...... .++...+++|+.+...
T Consensus 60 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 139 (278)
T PRK08277 60 EALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLL 139 (278)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHH
Confidence 57889999999988776653 7899999999642110 1122345677777665
Q ss_pred HH----HHHHhCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC
Q 015570 69 LV----DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA 137 (404)
Q Consensus 69 Ll----~Aa~~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~ 137 (404)
++ ..+.+.+..+||++||...+... .....|+.+|..++.+++. .|+.+..|+||++..+...
T Consensus 140 ~~~~~~~~~~~~~~g~ii~isS~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~ 213 (278)
T PRK08277 140 PTQVFAKDMVGRKGGNIINISSMNAFTPL------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNR 213 (278)
T ss_pred HHHHHHHHHHhcCCcEEEEEccchhcCCC------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchh
Confidence 44 44455566799999998765432 2245799999999988763 4899999999999875322
Q ss_pred cc---CcccEE----EccCCccccCcccHHHHHHHHHHHHhC-CC-CCCCcEEEEEcC
Q 015570 138 YK---ETHNIT----LSQEDTLFGGQVSNLQVAELLACMAKN-RS-LSYCKVVEVIAE 186 (404)
Q Consensus 138 ~~---~~~~i~----~~~~~~~~~~~Is~~DVA~ai~~~l~~-~~-~~~~~i~nI~~~ 186 (404)
.. ..+... ........+.+...+|||++++.++.. .. +..++++.+.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 214 ALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred hhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 10 000000 000111223467899999999999876 33 334667766555
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.6e-08 Score=90.46 Aligned_cols=166 Identities=12% Similarity=0.027 Sum_probs=110.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh-----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI-----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~-----ag 77 (404)
.+++++.+|+.|.+++.+++. .+|+|||++|...... .++...+++|+.+..++++++.. .+
T Consensus 47 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 126 (252)
T PRK07856 47 RPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG 126 (252)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988877664 5699999999753211 12334567899999999887754 23
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCcc--CcccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~~ 149 (404)
..+||++||....... .....|+.+|..+|.+++. ..+.+..|+||.+..+..... ....+.....
T Consensus 127 ~g~ii~isS~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~ 200 (252)
T PRK07856 127 GGSIVNIGSVSGRRPS------PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAA 200 (252)
T ss_pred CcEEEEEcccccCCCC------CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhh
Confidence 4689999998664322 1235799999999988863 237888999999875432110 0000000001
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+...+|+|++++.++... .+..++++.+.++.
T Consensus 201 ~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~ 239 (252)
T PRK07856 201 TVPLGRLATPADIAWACLFLASDLASYVSGANLEVHGGG 239 (252)
T ss_pred cCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence 112234578999999999999754 33456777776663
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.1e-07 Score=91.63 Aligned_cols=152 Identities=13% Similarity=0.026 Sum_probs=98.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHH----HHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~A----a~~agV 78 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+..+++++ +.+.+.
T Consensus 55 ~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 134 (287)
T PRK06194 55 AEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAE 134 (287)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC
Confidence 357889999999998887765 5799999999864321 12233467888888886666 455443
Q ss_pred ------CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCccc
Q 015570 79 ------NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHN 143 (404)
Q Consensus 79 ------krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~ 143 (404)
.+||++||.+..... .....|+.+|..+|.+++. .++.+..+.||++............
T Consensus 135 ~~~~~~g~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~ 208 (287)
T PRK06194 135 KDPAYEGHIVNTASMAGLLAP------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRP 208 (287)
T ss_pred CCCCCCeEEEEeCChhhccCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCc
Confidence 589999998664322 2235799999999888753 2467778899888543221110111
Q ss_pred EEEccCCcc---------------ccCcccHHHHHHHHHHHHhCC
Q 015570 144 ITLSQEDTL---------------FGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 144 i~~~~~~~~---------------~~~~Is~~DVA~ai~~~l~~~ 173 (404)
..+..++.. ..+.+++.|+|+.++.++...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 209 ADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred hhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHHHcC
Confidence 111111110 112479999999999988543
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.3e-08 Score=91.72 Aligned_cols=166 Identities=13% Similarity=0.095 Sum_probs=103.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC--CC-----CCCcchhhHHHHHHHHHHHHH-hCC---
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE--VF-----DITGPYRIDFQATKNLVDAAT-IAK--- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~--~~-----d~~~~~~vnv~~~~~Ll~Aa~-~ag--- 77 (404)
.++.++.+|+.|.+++..+++ .+|+|||++|..... .. ++...+.+|+.+..++++++. ...
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (248)
T PRK06947 52 GRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDR 131 (248)
T ss_pred CcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence 368899999999988776553 689999999975321 11 122346788888877765433 221
Q ss_pred ---CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cEEE
Q 015570 78 ---VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITL 146 (404)
Q Consensus 78 ---VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i~~ 146 (404)
-.+||++||.+...... ..+..|+.+|..++.+++. .|+.+++||||++..+........ ....
T Consensus 132 ~~~~~~ii~~sS~~~~~~~~-----~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~ 206 (248)
T PRK06947 132 GGRGGAIVNVSSIASRLGSP-----NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAAR 206 (248)
T ss_pred CCCCcEEEEECchhhcCCCC-----CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHH
Confidence 23699999875432211 1123699999998866642 489999999999976532211000 0000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.............+|+|++++.++.+.. ...++++.+.++
T Consensus 207 ~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 207 LGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred HhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence 0011111234688999999999988754 234666665443
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.6e-07 Score=87.95 Aligned_cols=140 Identities=13% Similarity=0.022 Sum_probs=101.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcC-CCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCCCEE
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGA-SEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~-~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrf 81 (404)
.+++++.+|+.|.+.+.++++ .+|+|||++|. .... ..++...+++|+.+..++++++. +.+..+|
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 128 (238)
T PRK08264 49 PRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAI 128 (238)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEE
Confidence 478999999999999888776 58999999997 2211 11223346788888888888765 4567789
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcccc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 154 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~ 154 (404)
|++||....... .....|+.+|..+|.+++. .|++++++|||.+.++.... ...
T Consensus 129 v~~sS~~~~~~~------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-------------~~~ 189 (238)
T PRK08264 129 VNVLSVLSWVNF------PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-------------LDA 189 (238)
T ss_pred EEEcChhhccCC------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-------------CCc
Confidence 999997654321 2346799999999877653 48999999999997642110 011
Q ss_pred CcccHHHHHHHHHHHHhCCC
Q 015570 155 GQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~ 174 (404)
..++.+|+++.++..+....
T Consensus 190 ~~~~~~~~a~~~~~~~~~~~ 209 (238)
T PRK08264 190 PKASPADVARQILDALEAGD 209 (238)
T ss_pred CCCCHHHHHHHHHHHHhCCC
Confidence 25889999999999987543
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.2e-08 Score=91.98 Aligned_cols=167 Identities=10% Similarity=0.030 Sum_probs=106.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHH----HHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDA----ATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~A----a~~agV 78 (404)
.++..+.+|+.|.+++.+++. .+|+||||+|..... ..++...+++|+.+...++++ +++.+.
T Consensus 58 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 137 (254)
T PRK06114 58 RRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGG 137 (254)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC
Confidence 367889999999988776654 579999999975321 122334466787777665554 445556
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc-EEEccCC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQED 150 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~-i~~~~~~ 150 (404)
.+||++||......... .....|..+|..++.+.+. .|+.+.+|+||++..+......... .......
T Consensus 138 ~~iv~isS~~~~~~~~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~ 213 (254)
T PRK06114 138 GSIVNIASMSGIIVNRG----LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQ 213 (254)
T ss_pred cEEEEECchhhcCCCCC----CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhc
Confidence 79999998764322110 1135699999988877653 5899999999999765322100000 0000111
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...+.+...+|||++++.++.+.. +..|+++.+.++
T Consensus 214 ~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 214 TPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred CCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence 122345688999999999987643 334667766555
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=9.5e-08 Score=90.77 Aligned_cols=164 Identities=13% Similarity=0.128 Sum_probs=106.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.+++++.+|+.|.+++.+++. ++|+|||++|..... ..++...+++|+.+...+++++... ...+
T Consensus 61 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~ 140 (257)
T PRK12744 61 AKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGK 140 (257)
T ss_pred CcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC
Confidence 368899999999988887654 689999999974211 1123345678999988888887653 1235
Q ss_pred EEEe-ccC-cccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-cc--EEE--
Q 015570 81 FIMV-SSL-GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN--ITL-- 146 (404)
Q Consensus 81 fI~v-SS~-gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~--i~~-- 146 (404)
+|++ ||. +... ..+..|+.+|..+|.+.+. .|+.+++|+||++..+....... .. ...
T Consensus 141 iv~~~ss~~~~~~--------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 212 (257)
T PRK12744 141 IVTLVTSLLGAFT--------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTA 212 (257)
T ss_pred EEEEecchhcccC--------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccccc
Confidence 6665 443 2221 1235799999999988874 37999999999997643211000 00 000
Q ss_pred c-cCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 147 S-QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 147 ~-~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
. ......+.+...+|||+++..++....+..++++++.++.
T Consensus 213 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~ 254 (257)
T PRK12744 213 AALSPFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGY 254 (257)
T ss_pred ccccccccCCCCCHHHHHHHHHHhhcccceeecceEeecCCc
Confidence 0 0011112578899999999999985433347788777663
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=9.4e-08 Score=90.55 Aligned_cols=165 Identities=9% Similarity=0.016 Sum_probs=109.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|+.|.+++..++. ++|+|||++|..... ..++...+++|+.+...+++++.. .+.
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 137 (254)
T PRK08085 58 IKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQA 137 (254)
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 357789999999988776653 589999999974321 123344577888887777776653 456
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-EEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~~~ 149 (404)
.+||++||....... ..+..|..+|..++.+++. .|+.+.+|+||++..+....... ..+ .....
T Consensus 138 ~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~ 211 (254)
T PRK08085 138 GKIINICSMQSELGR------DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCK 211 (254)
T ss_pred cEEEEEccchhccCC------CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHh
Confidence 799999997543221 2235799999999888864 58999999999998753321100 000 00011
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+...+|||++++.++.... +..++++.+.++
T Consensus 212 ~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg 249 (254)
T PRK08085 212 RTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGG 249 (254)
T ss_pred cCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 1222346789999999999997643 234556655554
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2e-07 Score=87.75 Aligned_cols=143 Identities=13% Similarity=0.083 Sum_probs=99.8
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|++|.+++.+++ .++|+|||++|....... ++...+++|+.+..++++++ ++.+.
T Consensus 53 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 132 (248)
T PRK08251 53 IKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS 132 (248)
T ss_pred ceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 46889999999998876654 378999999997543211 11234578888888877765 45577
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||.+..... ......|+.+|..++.+.+. .++.+++|+||++..+...... .
T Consensus 133 ~~iv~~sS~~~~~~~-----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--------~-- 197 (248)
T PRK08251 133 GHLVLISSVSAVRGL-----PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK--------S-- 197 (248)
T ss_pred CeEEEEeccccccCC-----CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc--------c--
Confidence 899999997553221 11235799999998877652 4789999999999764322100 0
Q ss_pred cccCcccHHHHHHHHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
....++.+|+|+.++..+++..
T Consensus 198 -~~~~~~~~~~a~~i~~~~~~~~ 219 (248)
T PRK08251 198 -TPFMVDTETGVKALVKAIEKEP 219 (248)
T ss_pred -CCccCCHHHHHHHHHHHHhcCC
Confidence 1125789999999999997644
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.2e-07 Score=89.38 Aligned_cols=163 Identities=12% Similarity=0.031 Sum_probs=104.7
Q ss_pred eEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCC------CCCcchhhHHH----HHHHHHHHHHhCCCCE
Q 015570 18 LELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQ----ATKNLVDAATIAKVNH 80 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~------d~~~~~~vnv~----~~~~Ll~Aa~~agVkr 80 (404)
+.++.+|+.|.+++.+++ .++|+|||++|....... ++...+++|+. ++.+++.++++.+.++
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 132 (251)
T PRK07069 53 AFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPAS 132 (251)
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcE
Confidence 456889999998877655 368999999997543211 12223456666 7788888888877889
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------C--CCCEEEEEcCccCCCCCCccCc----c-cEEE
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------S--GLPYTIVRPGGMERPTDAYKET----H-NITL 146 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~--gl~~tIlRpg~~~G~~~~~~~~----~-~i~~ 146 (404)
||++||....... .....|+.+|..++.+.+. . ++.++.|+||++.++....... . .+..
T Consensus 133 ii~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 206 (251)
T PRK07069 133 IVNISSVAAFKAE------PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRK 206 (251)
T ss_pred EEEecChhhccCC------CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHH
Confidence 9999998764432 1234699999988877752 2 4788999999998764321000 0 0000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.........+.+.+|+|++++.++.+.. +..++.+.+.++
T Consensus 207 ~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 207 LARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred HhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 0011122345689999999999886543 223455555443
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.3e-07 Score=89.34 Aligned_cols=152 Identities=13% Similarity=0.024 Sum_probs=100.3
Q ss_pred CeEEEEcCCCCHhhHHHHh--------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHH----HHHHHhCCC
Q 015570 17 MLELVECDLEKRVQIEPAL--------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNL----VDAATIAKV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL--------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~L----l~Aa~~agV 78 (404)
+++++.+|+.|.+++..++ .++|.|||++|...... .++...++.|+.++.++ ++++++.+.
T Consensus 46 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~ 125 (256)
T PRK08017 46 GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGE 125 (256)
T ss_pred CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC
Confidence 6789999999987766544 35799999998653211 11223467777776664 677777788
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcc--cEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~--~i~~~~~ 149 (404)
+++|++||....... .....|+.+|..+|.+.+ ..++.+++||||.+........... ...+...
T Consensus 126 ~~iv~~ss~~~~~~~------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~ 199 (256)
T PRK08017 126 GRIVMTSSVMGLIST------PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENP 199 (256)
T ss_pred CEEEEEcCcccccCC------CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhh
Confidence 899999997543221 224579999999987653 3689999999998865322111000 1111111
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
+...+.+++.+|+++++..++.+..
T Consensus 200 ~~~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 200 GIAARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred HHHhhcCCCHHHHHHHHHHHHhCCC
Confidence 1111346899999999999998766
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.9e-08 Score=89.44 Aligned_cols=164 Identities=12% Similarity=0.117 Sum_probs=106.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEec
Q 015570 17 MLELVECDLEKRVQIEPALG---NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVS 85 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vS 85 (404)
+++++.+|+.|.+.+.+++. ++|+|||++|..... ..++...+++|+.+...++..+... +..++|++|
T Consensus 52 ~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 131 (237)
T PRK12742 52 GATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIG 131 (237)
T ss_pred CCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 46788999999988777664 589999999875321 1123445678888888886655442 345899999
Q ss_pred cCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCccc
Q 015570 86 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS 158 (404)
Q Consensus 86 S~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is 158 (404)
|....... ......|+.+|..+|.+++. .|+.+++|+||++..+....... .............+.+
T Consensus 132 S~~~~~~~-----~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~ 205 (237)
T PRK12742 132 SVNGDRMP-----VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-MKDMMHSFMAIKRHGR 205 (237)
T ss_pred ccccccCC-----CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-HHHHHHhcCCCCCCCC
Confidence 97653211 12345799999999988763 57999999999997543211000 0000000111234678
Q ss_pred HHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 159 NLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 159 ~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
.+|+|+++..++.+.... .+.++.+.++
T Consensus 206 p~~~a~~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 206 PEEVAGMVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred HHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence 999999999998765422 3556655444
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=9.7e-08 Score=90.20 Aligned_cols=167 Identities=16% Similarity=0.144 Sum_probs=109.5
Q ss_pred eEEEEcCCCCHhhHHHHhC----CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCcccC
Q 015570 18 LELVECDLEKRVQIEPALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNK 91 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~----gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~gv~~ 91 (404)
.+++.+|+.|.+++.++++ ++|+|||+||... ..++...+.+|+.+...+++++... +-.+||++||...+.
T Consensus 25 ~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~--~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 25 DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG--TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAE 102 (241)
T ss_pred hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC--CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhc
Confidence 4678999999999888775 5899999999753 2345667889999999999988653 225899999987653
Q ss_pred CCCch---------------------hhcccchHHHHHHHHHHHHHH--------HCCCCEEEEEcCccCCCCCCccCcc
Q 015570 92 FGFPA---------------------AILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKETH 142 (404)
Q Consensus 92 ~~~~~---------------------~~~~~~~~y~~sK~~~E~~l~--------~~gl~~tIlRpg~~~G~~~~~~~~~ 142 (404)
..... .....+..|+.+|..++.+.+ ..|+.++.|+||++..+........
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~ 182 (241)
T PRK12428 103 WPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM 182 (241)
T ss_pred cccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhh
Confidence 11000 012234689999999876553 2589999999999987532210000
Q ss_pred --cEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 143 --NITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 143 --~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...........+.+...+|+|++++.++.... +..++.+.+.++
T Consensus 183 ~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg 229 (241)
T PRK12428 183 LGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG 229 (241)
T ss_pred hhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence 00000001112335689999999999886543 233555555444
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.9e-07 Score=88.41 Aligned_cols=165 Identities=14% Similarity=0.086 Sum_probs=107.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a 76 (404)
.++..+.+|+.+.+++..++ .++|+|||++|...... .++...+++|+.+...+++++...
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 133 (252)
T PRK12747 54 GSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSR 133 (252)
T ss_pred CceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34678899999987655332 16899999999753211 113445678999999988877653
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccE--E
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI--T 145 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i--~ 145 (404)
+..+||++||....... ..+..|+.+|..++.+++. .|+.+..|+||++..+.......... .
T Consensus 134 ~~~~g~iv~isS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~ 207 (252)
T PRK12747 134 LRDNSRIINISSAATRISL------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQ 207 (252)
T ss_pred hhcCCeEEEECCcccccCC------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHH
Confidence 23589999998764322 1235799999999987763 58999999999998764321000000 0
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
+.......+.+...+|||++++.++.... +..++++.+.++
T Consensus 208 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg 249 (252)
T PRK12747 208 YATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 249 (252)
T ss_pred HHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCC
Confidence 00001112346799999999999886533 234667766555
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.5e-07 Score=89.92 Aligned_cols=165 Identities=13% Similarity=0.094 Sum_probs=106.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC-----CCCCCcchhhHHHHHHHHHHHHHh---CCCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAATI---AKVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~-----~~d~~~~~~vnv~~~~~Ll~Aa~~---agVkr 80 (404)
.++.++.+|+.|.+++.++++ .+|+|||++|..... ..++...+++|+.+..++++++.. .+-.+
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ 131 (261)
T PRK08265 52 ERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGA 131 (261)
T ss_pred CeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcE
Confidence 358899999999988876654 679999999975321 112334466788888887776643 23358
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccE----EEccC
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI----TLSQE 149 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i----~~~~~ 149 (404)
||++||....... .....|+.+|..++.+.+. .|+.++.|+||++..+.......... .+...
T Consensus 132 ii~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~ 205 (261)
T PRK08265 132 IVNFTSISAKFAQ------TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP 205 (261)
T ss_pred EEEECchhhccCC------CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc
Confidence 9999997553221 1235799999998887763 58999999999986542210000000 00001
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
....+.+...+|||++++.++.+.. +..++++.+.++
T Consensus 206 ~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 206 FHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG 243 (261)
T ss_pred cCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence 1122345688999999999997643 334667776666
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.6e-07 Score=90.17 Aligned_cols=150 Identities=13% Similarity=0.029 Sum_probs=99.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC---C---CCCcchhhHHHHH----HHHHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV---F---DITGPYRIDFQAT----KNLVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~---~---d~~~~~~vnv~~~----~~Ll~Aa~~agV 78 (404)
.++.++.+|+.|.+++..++ ..+|++||++|...... . ++...+++|+.+. ++++..+++.+.
T Consensus 57 ~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~ 136 (334)
T PRK07109 57 GEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDR 136 (334)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 36788999999998887764 37899999999753221 1 1122345555544 456666666666
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
.+||++||.+.+... .....|+.+|..++.+.+. .++.+++|+||.+..+....... . ....
T Consensus 137 g~iV~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~-~--~~~~ 207 (334)
T PRK07109 137 GAIIQVGSALAYRSI------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS-R--LPVE 207 (334)
T ss_pred cEEEEeCChhhccCC------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh-h--cccc
Confidence 799999998775432 2346799999987766541 46999999999987643221110 0 1111
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.......++.+|||++++.++.++.
T Consensus 208 ~~~~~~~~~pe~vA~~i~~~~~~~~ 232 (334)
T PRK07109 208 PQPVPPIYQPEVVADAILYAAEHPR 232 (334)
T ss_pred ccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 1112345789999999999998653
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.2e-07 Score=89.68 Aligned_cols=166 Identities=8% Similarity=0.013 Sum_probs=108.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC-------CCCCCcchhhHHHHHHHHHHH----HHhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDA----ATIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~~~~Ll~A----a~~ag 77 (404)
.+++++.+|+.|.+++..+++ .+|+|||++|..... ..++...+.+|+.+...++++ +.+.+
T Consensus 56 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 135 (253)
T PRK06172 56 GEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG 135 (253)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 468899999999988877654 569999999974221 112334466888887666554 44455
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccE-EEc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNI-TLS 147 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i-~~~ 147 (404)
..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||.+..+....... ..+ ...
T Consensus 136 ~~~ii~~sS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~ 209 (253)
T PRK06172 136 GGAIVNTASVAGLGAA------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFA 209 (253)
T ss_pred CcEEEEECchhhccCC------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHH
Confidence 6789999998654332 2346799999999887763 47999999999986543211100 000 000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
........+...+|+|+.+++++.+. .+..|+++.+.++.
T Consensus 210 ~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 210 AAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred hccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 01111234578999999999999764 33456777776663
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.8e-07 Score=87.27 Aligned_cols=165 Identities=16% Similarity=0.055 Sum_probs=104.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++.++.+|+.|.+.+.++++ ++|+||||+|....... ++...+++|+.+...+++++.. .+
T Consensus 51 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 130 (256)
T PRK08643 51 GKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH 130 (256)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 467889999999988776654 68999999987532211 1233466788887766665543 23
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC------cccE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE------THNI 144 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~------~~~i 144 (404)
-.+||++||....... .....|+.+|..++.+++. .|+.++.|+||++..+...... .+..
T Consensus 131 ~~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~ 204 (256)
T PRK08643 131 GGKIINATSQAGVVGN------PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKP 204 (256)
T ss_pred CCEEEEECccccccCC------CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCC
Confidence 2489999987553221 1235799999998877653 5899999999999764321000 0000
Q ss_pred EE-----ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 145 TL-----SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 145 ~~-----~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.. .......+.+...+|||++++.++.... ...+.++.+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg 252 (256)
T PRK08643 205 DEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGG 252 (256)
T ss_pred chHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 00 0011122346789999999999997643 234556655444
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=2e-07 Score=87.61 Aligned_cols=163 Identities=12% Similarity=0.057 Sum_probs=105.3
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCEE
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHF 81 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrf 81 (404)
++.++.+|+.|.+++..++ .++|+|||++|...... .++...+++|+.+..+|++++... ...++
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 132 (249)
T PRK06500 53 SALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASI 132 (249)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEE
Confidence 5778999999987765443 47899999998753211 223345789999999999999742 23477
Q ss_pred EEeccCcc-cCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEE----Ec
Q 015570 82 IMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNIT----LS 147 (404)
Q Consensus 82 I~vSS~gv-~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~----~~ 147 (404)
|++||... ++. .....|+.+|..+|.+++. .|+.+++||||.++++..... ...... ..
T Consensus 133 i~~~S~~~~~~~-------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~ 205 (249)
T PRK06500 133 VLNGSINAHIGM-------PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQI 205 (249)
T ss_pred EEEechHhccCC-------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHH
Confidence 77777543 221 1236799999999988852 489999999999987632110 000000 00
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
........+...+|+|++++.++.+.. +..+..+.+.++
T Consensus 206 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 206 QALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred HhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 001112235688999999999987543 233556655554
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.5e-07 Score=90.93 Aligned_cols=158 Identities=15% Similarity=0.081 Sum_probs=100.4
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC----CCCCCcchhhHHHHHHH----HHHHHHhCCCCEE
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE----VFDITGPYRIDFQATKN----LVDAATIAKVNHF 81 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~----~~d~~~~~~vnv~~~~~----Ll~Aa~~agVkrf 81 (404)
+++++.+|+.|.+++.+++ .++|+|||++|..... ..++...+.+|+.+... ++.++++.+..||
T Consensus 72 ~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~i 151 (315)
T PRK06196 72 GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARV 151 (315)
T ss_pred hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeE
Confidence 4789999999998887665 3689999999975321 11234446788888544 4555556666799
Q ss_pred EEeccCcccCCCCc------hhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cEEE-
Q 015570 82 IMVSSLGTNKFGFP------AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITL- 146 (404)
Q Consensus 82 I~vSS~gv~~~~~~------~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i~~- 146 (404)
|++||.+....... ......+..|+.+|..++.+.+. .|+.+++||||++.++........ ....
T Consensus 152 V~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~ 231 (315)
T PRK06196 152 VALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALG 231 (315)
T ss_pred EEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhh
Confidence 99999754221100 01123356799999998877642 589999999999987643211110 0000
Q ss_pred cc--CCcccc-CcccHHHHHHHHHHHHhCCC
Q 015570 147 SQ--EDTLFG-GQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 147 ~~--~~~~~~-~~Is~~DVA~ai~~~l~~~~ 174 (404)
.. ....+. .+.+.+|+|..++.++..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 232 WVDEHGNPIDPGFKTPAQGAATQVWAATSPQ 262 (315)
T ss_pred hhhhhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence 00 001111 24578999999999997654
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.2e-07 Score=90.65 Aligned_cols=145 Identities=17% Similarity=0.114 Sum_probs=99.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC--------CCCCcchhhHHHHHHHHHHHH----HhC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAA----TIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~--------~d~~~~~~vnv~~~~~Ll~Aa----~~a 76 (404)
.++.++.+|+.|.+++.++++ ++|+||||+|...... .++...+.+|+.+..++++++ ++.
T Consensus 89 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 168 (293)
T PRK05866 89 GDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER 168 (293)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 357899999999998887765 7899999999753221 111234567888877766654 466
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
+..+||++||.++..... ..+..|+.+|..++.+++. .|+.+++|+||.+-.+.... .. ..
T Consensus 169 ~~g~iv~isS~~~~~~~~-----p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~-----~~-~~- 236 (293)
T PRK05866 169 GDGHIINVATWGVLSEAS-----PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP-----TK-AY- 236 (293)
T ss_pred CCcEEEEECChhhcCCCC-----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc-----cc-cc-
Confidence 778999999976543211 1235799999999877653 58999999999875432210 00 00
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.....++.+++|+.++.++.+..
T Consensus 237 --~~~~~~~pe~vA~~~~~~~~~~~ 259 (293)
T PRK05866 237 --DGLPALTADEAAEWMVTAARTRP 259 (293)
T ss_pred --cCCCCCCHHHHHHHHHHHHhcCC
Confidence 01124799999999999998643
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.8e-07 Score=89.24 Aligned_cols=166 Identities=11% Similarity=0.063 Sum_probs=109.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+...+++++. +.+.
T Consensus 44 ~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 123 (258)
T PRK06398 44 NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDK 123 (258)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 468899999999988877654 6899999999753211 1233446789888888777664 3456
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccC------c-cc--
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE------T-HN-- 143 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~------~-~~-- 143 (404)
.+||++||....... ..+..|+.+|..++.+.+. .++.+..|+||++..+...... . ..
T Consensus 124 g~iv~isS~~~~~~~------~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~ 197 (258)
T PRK06398 124 GVIINIASVQSFAVT------RNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVE 197 (258)
T ss_pred eEEEEeCcchhccCC------CCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhH
Confidence 799999998664322 2346799999999988873 2488999999998654211000 0 00
Q ss_pred --EEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 144 --ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 144 --i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+.........+.+...+|||+++++++.... ...++++.+.++.
T Consensus 198 ~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 198 RKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred HHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence 0000111122345689999999999987543 3346667666654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.3e-07 Score=89.99 Aligned_cols=150 Identities=15% Similarity=-0.010 Sum_probs=99.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 16 EMLELVECDLEKRVQIEPALG--------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
.+++++.+|+.|.+++.+++. .+|+||||+|...... .++...+.+|+.+..++++++. ..+
T Consensus 48 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 127 (260)
T PRK08267 48 GNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP 127 (260)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 468999999999988876654 5699999999763221 1233456789998888877764 445
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
..+||++||....... .....|+.+|..++.+++. .|+.+++||||++....... ......... .
T Consensus 128 ~~~iv~isS~~~~~~~------~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~-~ 199 (260)
T PRK08267 128 GARVINTSSASAIYGQ------PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG-TSNEVDAGS-T 199 (260)
T ss_pred CCEEEEeCchhhCcCC------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc-ccchhhhhh-H
Confidence 6789999997543221 1235799999988877653 57999999999986542211 000000000 0
Q ss_pred ccccCcccHHHHHHHHHHHHhCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~ 173 (404)
...+..+..+|+|++++.++.+.
T Consensus 200 ~~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 200 KRLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred hhccCCCCHHHHHHHHHHHHhCC
Confidence 01122477899999999999754
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.2e-07 Score=89.92 Aligned_cols=165 Identities=10% Similarity=0.074 Sum_probs=110.0
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHHH----hCCCCE
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAAT----IAKVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa~----~agVkr 80 (404)
++.++.+|++|.+++.++++ ++|+||||+|...... .++...+.+|+.+..++++++. +.+..+
T Consensus 61 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 140 (255)
T PRK06113 61 QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGV 140 (255)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcE
Confidence 57889999999988776543 6799999999753211 1222336789999999888875 344468
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccE-EEccCCcc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTL 152 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i-~~~~~~~~ 152 (404)
||++||....... .....|+.+|..++.+++. .|+.+++|+||.+..+.........+ ........
T Consensus 141 iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~ 214 (255)
T PRK06113 141 ILTITSMAAENKN------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP 214 (255)
T ss_pred EEEEecccccCCC------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCC
Confidence 9999997654321 2235799999999988863 57899999999986542210000000 00001111
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...+...+|+++++..++.... +..++++++.++.
T Consensus 215 ~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~ 250 (255)
T PRK06113 215 IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_pred CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 2335789999999999997543 2347788877764
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.9e-07 Score=89.20 Aligned_cols=165 Identities=12% Similarity=0.045 Sum_probs=107.4
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
++.++.+|++|.+++.+++. .+|+||||+|..... ..++...+.+|+.+...+++++ ++.+..
T Consensus 60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g 139 (265)
T PRK07097 60 EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHG 139 (265)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCc
Confidence 68899999999988877663 589999999975321 1122333567877777666655 345667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc----cc---EE
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----HN---IT 145 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~----~~---i~ 145 (404)
+||++||....... ..+..|+.+|..++.+++. .|+.++.|+||++..+....... +. +.
T Consensus 140 ~iv~isS~~~~~~~------~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 213 (265)
T PRK07097 140 KIINICSMMSELGR------ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFD 213 (265)
T ss_pred EEEEEcCccccCCC------CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHH
Confidence 99999997543211 2246799999998888763 58999999999997653211000 00 00
Q ss_pred -EccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 146 -LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 146 -~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..........+...+|+|+.++.++.+. ....++++.+.++.
T Consensus 214 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 214 QFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred HHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence 0000111234678899999999999864 33346667666654
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.7e-07 Score=87.96 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=104.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC------CCCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~------~~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
..+..+..|++|.+++..++ ..+|++||+||.... ...+|..++++|+.|..++.++. .+.+-
T Consensus 53 ~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~ 132 (246)
T COG4221 53 GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKS 132 (246)
T ss_pred CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCC
Confidence 46889999999998855443 479999999998632 23456677889999888876665 45565
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccC--
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE-- 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~-- 149 (404)
.|+|.+||......... ...|+.+|+.+..+... .++.++.|-||.+.... ...++..++
T Consensus 133 G~IiN~~SiAG~~~y~~------~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~-----~s~v~~~g~~~ 201 (246)
T COG4221 133 GHIINLGSIAGRYPYPG------GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTE-----FSTVRFEGDDE 201 (246)
T ss_pred ceEEEeccccccccCCC------CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceeccee-----cccccCCchhh
Confidence 69999999875332211 24699999988776642 68999999999985421 111121111
Q ss_pred ---Cc-cccCcccHHHHHHHHHHHHhCCC
Q 015570 150 ---DT-LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ---~~-~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.. .....+..+|||++|++++..+.
T Consensus 202 ~~~~~y~~~~~l~p~dIA~~V~~~~~~P~ 230 (246)
T COG4221 202 RADKVYKGGTALTPEDIAEAVLFAATQPQ 230 (246)
T ss_pred hHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence 11 12247899999999999999887
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2e-07 Score=88.32 Aligned_cols=166 Identities=10% Similarity=0.033 Sum_probs=106.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC--C--C---CCCCcchhhHHHHHHHH----HHHHHhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK--E--V---FDITGPYRIDFQATKNL----VDAATIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~--~--~---~d~~~~~~vnv~~~~~L----l~Aa~~ag 77 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|.... . . .++...+++|+.+...+ +..+++.+
T Consensus 55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~ 134 (254)
T PRK07478 55 GEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG 134 (254)
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 357889999999988776654 78999999997421 1 1 12344567888766655 44555566
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~i-~~~~ 148 (404)
..+||++||....... ...+..|+.+|..++.+.+. .|+.++.|+||++..+...... .... ....
T Consensus 135 ~~~iv~~sS~~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~ 209 (254)
T PRK07478 135 GGSLIFTSTFVGHTAG-----FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVA 209 (254)
T ss_pred CceEEEEechHhhccC-----CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHH
Confidence 6789999997553221 12245799999999877763 4799999999999654221100 0000 0000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.......+...+|+|+++++++.+.. +..++++.+.++
T Consensus 210 ~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 210 GLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred hcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence 11112345789999999999997643 334667766554
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.7e-07 Score=88.54 Aligned_cols=165 Identities=13% Similarity=0.110 Sum_probs=103.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|+.|.+++.+++. .+|+|||++|..... ..++...+++|+.+...+++++. +.+.
T Consensus 49 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 128 (254)
T TIGR02415 49 GKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH 128 (254)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC
Confidence 358899999999998877653 579999999975321 11223446788887776665543 3332
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC--ccc---EE
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THN---IT 145 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--~~~---i~ 145 (404)
.+||++||....... ..+..|+.+|..++.+++. .++.+++|+||++..+...... ... ..
T Consensus 129 ~~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~ 202 (254)
T TIGR02415 129 GGKIINAASIAGHEGN------PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKP 202 (254)
T ss_pred CeEEEEecchhhcCCC------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCc
Confidence 589999987553321 1245799999999888763 4799999999998654211000 000 00
Q ss_pred Ecc------CCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 146 LSQ------EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 146 ~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
+.. .....+.+++.+|+++++..++.+......+.+...++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~ 249 (254)
T TIGR02415 203 IGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDG 249 (254)
T ss_pred hHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecC
Confidence 000 01112336889999999999998765333344444433
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.8e-07 Score=88.46 Aligned_cols=165 Identities=12% Similarity=0.056 Sum_probs=105.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.+++++.+|+.+.+++.++++ .+|+|||++|..... ..++...+.+|+.+..++++++.. ..
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 137 (258)
T PRK06949 58 GAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAK 137 (258)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC
Confidence 468899999999988887765 689999999964321 112334466787788777776542 22
Q ss_pred -------CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Ccc
Q 015570 78 -------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETH 142 (404)
Q Consensus 78 -------VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~ 142 (404)
..+||++||.+..... .....|+.+|..++.+++. .|+.+++||||+++++..... ...
T Consensus 138 ~~~~~~~~g~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~ 211 (258)
T PRK06949 138 GAGNTKPGGRIINIASVAGLRVL------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETE 211 (258)
T ss_pred cCCCCCCCeEEEEECcccccCCC------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChH
Confidence 2589999998664321 2245799999988887753 589999999999987643211 000
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.............+...+|||+++++++.... +..|.++.+.++
T Consensus 212 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg 256 (258)
T PRK06949 212 QGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDG 256 (258)
T ss_pred HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence 00000000111235678999999999987543 233555554443
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.5e-07 Score=87.82 Aligned_cols=165 Identities=11% Similarity=0.034 Sum_probs=107.4
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|+.|.+++..++ .++|+|||++|..... ..++...+.+|+.+..++++++. +.+.
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 139 (257)
T PRK09242 60 REVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHAS 139 (257)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 46888999999988766554 4689999999974211 12233446788888888877764 4556
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cccc-EEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHN-ITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~-i~~~~~ 149 (404)
.+||++||....... .....|+.+|..++.+++. .|+.++.|+||++..+..... .... ......
T Consensus 140 ~~ii~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~ 213 (257)
T PRK09242 140 SAIVNIGSVSGLTHV------RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIE 213 (257)
T ss_pred ceEEEECccccCCCC------CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHh
Confidence 799999998654322 2234689999998887763 589999999999977543211 0000 000001
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+...+||+.++..++.+.. ...++++.+.++
T Consensus 214 ~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 214 RTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred cCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 1112234578999999999986543 224666666554
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.1e-07 Score=88.46 Aligned_cols=165 Identities=12% Similarity=0.020 Sum_probs=108.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|+.|.+++..+++ ++|+|||++|..... ..++...+++|+.+..++++++. +.+.
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 137 (260)
T PRK07063 58 ARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGR 137 (260)
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCC
Confidence 468899999999988877664 789999999964321 12333446788888888777764 3455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-cCc----c-cEE
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KET----H-NIT 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~~~----~-~i~ 145 (404)
.+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++-.+.... ... . ...
T Consensus 138 g~iv~isS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 211 (260)
T PRK07063 138 GSIVNIASTHAFKII------PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARA 211 (260)
T ss_pred eEEEEECChhhccCC------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHH
Confidence 689999998654322 1235799999999888863 57999999999986542210 000 0 000
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
........+.+...+|||++++.++.+.. +..++++.+.++
T Consensus 212 ~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg 253 (260)
T PRK07063 212 ETLALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGG 253 (260)
T ss_pred HHHhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCC
Confidence 00011122345689999999999997643 334566666555
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-07 Score=89.67 Aligned_cols=166 Identities=12% Similarity=0.092 Sum_probs=109.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++.++.+|+.|.+++.++++ ++|+||||+|...... .++...+.+|+.+..++++++.. .+
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK06198 56 AKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA 135 (260)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 357789999999988877654 6899999999753211 11233467888888888777643 22
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cc--ccE-E-
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET--HNI-T- 145 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~--~~i-~- 145 (404)
..+||++||....... .....|+.+|..+|.+.+. .++.++.|+||+++++..... .. ... .
T Consensus 136 ~g~iv~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~ 209 (260)
T PRK06198 136 EGTIVNIGSMSAHGGQ------PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDW 209 (260)
T ss_pred CCEEEEECCcccccCC------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHH
Confidence 3589999998764322 1245799999999888763 468899999999987643110 00 000 0
Q ss_pred --EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 146 --LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 146 --~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.......+..+++.+|+|+++++++.+.. ...++++.+.++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 210 LEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred HHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence 00011123346899999999999986543 2347778776664
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.4e-07 Score=86.51 Aligned_cols=165 Identities=15% Similarity=0.108 Sum_probs=106.9
Q ss_pred CCeEEEEcCCCCH-hhHHHHhCCCCEEEEcCcCCCC--C-----CCCCCcchhhHHHHHHHHHHHHHh----CCCCEEEE
Q 015570 16 EMLELVECDLEKR-VQIEPALGNASVVICCIGASEK--E-----VFDITGPYRIDFQATKNLVDAATI----AKVNHFIM 83 (404)
Q Consensus 16 ~gveiV~gDl~d~-~~l~~aL~gvDvVI~~ag~~~~--~-----~~d~~~~~~vnv~~~~~Ll~Aa~~----agVkrfI~ 83 (404)
.++.++.+|+.+. +.+.+.+..+|+|||++|.... . ..++...+.+|+.+..++++++.. .+..+||+
T Consensus 45 ~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 124 (235)
T PRK06550 45 GNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIIN 124 (235)
T ss_pred CcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 4688999999987 5555556789999999986421 1 112334467888888888887753 44468999
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEE-EccCCcccc
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNIT-LSQEDTLFG 154 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~-~~~~~~~~~ 154 (404)
+||....... .....|+.+|..++.+.+. .|+.+++|+||++..+..... ....+. ........+
T Consensus 125 ~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 198 (235)
T PRK06550 125 MCSIASFVAG------GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIK 198 (235)
T ss_pred EcChhhccCC------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcC
Confidence 9997654321 1234688999988777653 589999999999976532110 000000 000111233
Q ss_pred CcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 155 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.+...+|+|++++.++.+.. ...+.++.+.++
T Consensus 199 ~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 199 RWAEPEEVAELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred CCCCHHHHHHHHHHHcChhhccCCCcEEEECCc
Confidence 46789999999999996543 334566666554
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-07 Score=89.60 Aligned_cols=166 Identities=14% Similarity=0.059 Sum_probs=107.8
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++..+.+|+.|.+++..++ .++|+||||+|...... .++...+++|+.+...+++++.. .+
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 137 (253)
T PRK05867 58 GKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ 137 (253)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC
Confidence 46788999999998877665 37999999999753211 12333457888888888777643 22
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
-.++|++||........ ...+..|+.+|..++.+.+. .|+.+..|+||++..+........ .......
T Consensus 138 ~g~iv~~sS~~~~~~~~----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~-~~~~~~~ 212 (253)
T PRK05867 138 GGVIINTASMSGHIINV----PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY-QPLWEPK 212 (253)
T ss_pred CcEEEEECcHHhcCCCC----CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH-HHHHHhc
Confidence 24789998875432110 01235799999999888863 589999999999965432110000 0000111
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...+.+...+|||++++.++.... +..++++.+.++
T Consensus 213 ~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG 249 (253)
T PRK05867 213 IPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGG 249 (253)
T ss_pred CCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCC
Confidence 223446799999999999997543 334667766665
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.6e-07 Score=86.30 Aligned_cols=164 Identities=11% Similarity=0.079 Sum_probs=106.3
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-------CCCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-------~~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+.++.+|+.|.+++..+++ .+|+|||++|.... ...++...+++|+.+...+++++ ++.+.
T Consensus 58 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 137 (252)
T PRK07035 58 KAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGG 137 (252)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence 57789999999988776553 58999999986421 01112345678888887776655 45566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cccc-EEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHN-ITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~-i~~~~~ 149 (404)
.++|++||....... .....|+.+|..++.+++. .|+.++.|+||.+..+..... .... ......
T Consensus 138 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~ 211 (252)
T PRK07035 138 GSIVNVASVNGVSPG------DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALA 211 (252)
T ss_pred cEEEEECchhhcCCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHc
Confidence 799999987553321 2245799999999988863 589999999999865321110 0000 000001
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~ 186 (404)
......+...+|||+++..++.+... ..++++.+-++
T Consensus 212 ~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 212 HIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred cCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 11123467899999999999976542 34666666554
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.8e-07 Score=85.78 Aligned_cols=143 Identities=15% Similarity=0.111 Sum_probs=99.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC----CCCEEEEcCcCCCCCC---CC---CCcchhhHHHHHHHHHHHHH----hCCCCEE
Q 015570 16 EMLELVECDLEKRVQIEPALG----NASVVICCIGASEKEV---FD---ITGPYRIDFQATKNLVDAAT----IAKVNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~----gvDvVI~~ag~~~~~~---~d---~~~~~~vnv~~~~~Ll~Aa~----~agVkrf 81 (404)
.+++++.+|+.|.+++.++++ .+|+|||++|...... .+ +...+++|+.+..++++++. +.+..+|
T Consensus 51 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 130 (243)
T PRK07102 51 VAVSTHELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTI 130 (243)
T ss_pred CeEEEEecCCCChHHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEE
Confidence 478999999999988877665 4699999998753221 11 12345788888888877764 3567899
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcccc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 154 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~ 154 (404)
|++||....... .....|+.+|..++.+.+. .|+.++.|+||+++++.... . .. ...
T Consensus 131 v~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~-----~--~~---~~~ 194 (243)
T PRK07102 131 VGISSVAGDRGR------ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG-----L--KL---PGP 194 (243)
T ss_pred EEEecccccCCC------CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc-----c--CC---Ccc
Confidence 999997543221 1224689999888777653 58999999999998752210 0 00 112
Q ss_pred CcccHHHHHHHHHHHHhCCC
Q 015570 155 GQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~ 174 (404)
.+++.+|+|++++.++.+..
T Consensus 195 ~~~~~~~~a~~i~~~~~~~~ 214 (243)
T PRK07102 195 LTAQPEEVAKDIFRAIEKGK 214 (243)
T ss_pred ccCCHHHHHHHHHHHHhCCC
Confidence 35789999999999998644
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-06 Score=83.22 Aligned_cols=152 Identities=12% Similarity=0.066 Sum_probs=98.1
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh---CCCCE
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI---AKVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~---agVkr 80 (404)
+++++.+|+.|.+++.+++ .++|+|||++|...... .++...+++|+.+..++++++.. .+..+
T Consensus 45 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~ 124 (274)
T PRK05693 45 GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGL 124 (274)
T ss_pred CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCE
Confidence 5788999999998877665 36899999999753221 12234467888888888777633 23468
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCcc-
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL- 152 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~- 152 (404)
+|++||....... .....|+.+|..++.+.+ ..|+.+++||||.+..+..................
T Consensus 125 iv~isS~~~~~~~------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~ 198 (274)
T PRK05693 125 VVNIGSVSGVLVT------PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPW 198 (274)
T ss_pred EEEECCccccCCC------CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCcc
Confidence 9999987543221 123579999998887654 25899999999999754221110000000000000
Q ss_pred --------------ccCcccHHHHHHHHHHHHhCCC
Q 015570 153 --------------FGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 153 --------------~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
....+..+|+|+.++.++..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~ 234 (274)
T PRK05693 199 WPLREHIQARARASQDNPTPAAEFARQLLAAVQQSP 234 (274)
T ss_pred HHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence 0123678999999999998654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.1e-07 Score=88.01 Aligned_cols=166 Identities=13% Similarity=0.112 Sum_probs=106.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCC------CCCCCcchhhHHHH----HHHHHHHHHhCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGASEKE------VFDITGPYRIDFQA----TKNLVDAATIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~----~~~Ll~Aa~~agVk 79 (404)
.+++++.+|+.|.+++..+++ ++|++||++|..... ..++...+++|+.+ +++++..+++.+..
T Consensus 58 ~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g 137 (263)
T PRK08339 58 VDVSYIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFG 137 (263)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 468899999999988877664 689999999874321 12234445667555 44555666666667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-----------c
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----------T 141 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-----------~ 141 (404)
++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+...... .
T Consensus 138 ~Ii~isS~~~~~~~------~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 211 (263)
T PRK08339 138 RIIYSTSVAIKEPI------PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVE 211 (263)
T ss_pred EEEEEcCccccCCC------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHH
Confidence 99999998754321 1235688899988877753 5899999999999654211000 0
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
............+.+...+|||++++.++.+.. +..++++.+.++.
T Consensus 212 ~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~ 258 (263)
T PRK08339 212 EALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGR 258 (263)
T ss_pred HHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCc
Confidence 000000111122346789999999999997643 3346667666554
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.5e-07 Score=86.13 Aligned_cols=165 Identities=13% Similarity=0.033 Sum_probs=106.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag- 77 (404)
.++.++.+|++|.+++..+++ ++|++||++|..... ..++...+++|+.+...+++++. +.+
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~ 134 (251)
T PRK12481 55 RKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN 134 (251)
T ss_pred CeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC
Confidence 468899999999988877654 689999999975321 12344556788887777766553 333
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccC-cccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~-~~~i-~~~~ 148 (404)
-.+||++||....... .....|+.+|..++.+.+ ..|+.+..|+||++..+...... .... ....
T Consensus 135 ~g~ii~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~ 208 (251)
T PRK12481 135 GGKIINIASMLSFQGG------IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAIL 208 (251)
T ss_pred CCEEEEeCChhhcCCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHH
Confidence 3589999997654322 112469999999988776 26899999999998654221100 0000 0000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.....+.+...+|||++++.++.... +..++++.+.++
T Consensus 209 ~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 209 ERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence 11122346789999999999997533 334566665544
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.6e-07 Score=83.46 Aligned_cols=143 Identities=11% Similarity=0.047 Sum_probs=101.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC----CCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCEEEE
Q 015570 16 EMLELVECDLEKRVQIEPALGN----ASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIM 83 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g----vDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~ 83 (404)
.++.++.+|++|.+++.++++. .|.+||++|...... .++...+++|+.+..++++++... +..+||+
T Consensus 46 ~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~ 125 (240)
T PRK06101 46 ANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVI 125 (240)
T ss_pred CCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEE
Confidence 4688999999999999988764 588999998542111 112345789999999999988752 2357898
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCc
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ 156 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~ 156 (404)
+||....... .....|+.+|..++.+.+ ..|+.++.||||+++++..... .+ .....
T Consensus 126 isS~~~~~~~------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~---~~-------~~~~~ 189 (240)
T PRK06101 126 VGSIASELAL------PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN---TF-------AMPMI 189 (240)
T ss_pred EechhhccCC------CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC---CC-------CCCcc
Confidence 8886542211 123579999999988865 3689999999999987533211 00 01124
Q ss_pred ccHHHHHHHHHHHHhCCC
Q 015570 157 VSNLQVAELLACMAKNRS 174 (404)
Q Consensus 157 Is~~DVA~ai~~~l~~~~ 174 (404)
+..+|+|+.++..++...
T Consensus 190 ~~~~~~a~~i~~~i~~~~ 207 (240)
T PRK06101 190 ITVEQASQEIRAQLARGK 207 (240)
T ss_pred cCHHHHHHHHHHHHhcCC
Confidence 799999999999998654
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.8e-07 Score=84.54 Aligned_cols=161 Identities=11% Similarity=0.042 Sum_probs=101.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC----CCCcchhhHHHHHHHHHHHHHhC--CCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF----DITGPYRIDFQATKNLVDAATIA--KVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~----d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI 82 (404)
.+++++.+|+.|.+.+.++++ ++|.|||++|....... ++...+..|+.+..++++.+... ...+||
T Consensus 53 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv 132 (238)
T PRK05786 53 GNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIV 132 (238)
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEE
Confidence 368999999999988776543 57999999986432111 11223456666666666655442 124799
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccC
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG 155 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~ 155 (404)
++||....... ...+..|+.+|...+.+++. .|+++++||||+++++.... ..+... ......
T Consensus 133 ~~ss~~~~~~~-----~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~---~~~~~~--~~~~~~ 202 (238)
T PRK05786 133 LVSSMSGIYKA-----SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE---RNWKKL--RKLGDD 202 (238)
T ss_pred EEecchhcccC-----CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch---hhhhhh--ccccCC
Confidence 99987542111 12345799999988766542 58999999999999863211 001000 011123
Q ss_pred cccHHHHHHHHHHHHhCCCC-CCCcEEEEEcC
Q 015570 156 QVSNLQVAELLACMAKNRSL-SYCKVVEVIAE 186 (404)
Q Consensus 156 ~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~ 186 (404)
+++.+|++++++.++.+... ..++.+.+.++
T Consensus 203 ~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 203 MAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG 234 (238)
T ss_pred CCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence 68999999999999976442 24556655433
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.5e-07 Score=86.05 Aligned_cols=165 Identities=13% Similarity=0.021 Sum_probs=107.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++..+.+|+.|.+++..+++ ++|+||||+|..... ..++...+.+|+.+..+|++++.. .+
T Consensus 57 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 136 (253)
T PRK08993 57 RRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN 136 (253)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC
Confidence 357889999999988877664 689999999975321 123455678999998888887643 22
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~i-~~~~ 148 (404)
-.++|++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+...... .... ....
T Consensus 137 ~g~iv~isS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~ 210 (253)
T PRK08993 137 GGKIINIASMLSFQGG------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEIL 210 (253)
T ss_pred CeEEEEECchhhccCC------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHH
Confidence 2479999997654322 1134799999998877763 5899999999999654321100 0000 0000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
.....+.+...+|||++++.++.+.... .++++.+.++
T Consensus 211 ~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 211 DRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 1111234678999999999999765423 4556655443
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.3e-07 Score=87.93 Aligned_cols=151 Identities=15% Similarity=0.093 Sum_probs=96.8
Q ss_pred eEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----h-CCCC
Q 015570 18 LELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----I-AKVN 79 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~-agVk 79 (404)
+.++.+|+.|.+++..++ .++|+|||++|...... .++...+++|+.+..++++++. + .+..
T Consensus 52 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 131 (272)
T PRK07832 52 PEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGG 131 (272)
T ss_pred ceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc
Confidence 456789999988776544 36899999999753211 1223446889999999988864 2 2245
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCccc---EE--E-
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN---IT--L- 146 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~---i~--~- 146 (404)
+||++||....... .....|+.+|..++.+.+ ..|+.+++|+||++.++......... .. +
T Consensus 132 ~ii~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 205 (272)
T PRK07832 132 HLVNVSSAAGLVAL------PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQ 205 (272)
T ss_pred EEEEEccccccCCC------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHH
Confidence 89999997543211 123468888887666553 36899999999999865322110000 00 0
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
..........++.+|||++++.++.+..
T Consensus 206 ~~~~~~~~~~~~~~~vA~~~~~~~~~~~ 233 (272)
T PRK07832 206 KWVDRFRGHAVTPEKAAEKILAGVEKNR 233 (272)
T ss_pred HHHHhcccCCCCHHHHHHHHHHHHhcCC
Confidence 0001122346899999999999996543
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1e-06 Score=87.70 Aligned_cols=150 Identities=16% Similarity=0.017 Sum_probs=100.4
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|+.|.+++.+++ .++|++|||+|...... .++...+++|+.+..++++++ ++.+.
T Consensus 56 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~ 135 (330)
T PRK06139 56 AEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGH 135 (330)
T ss_pred CcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCC
Confidence 35778999999998888765 47899999999753221 122334678888888776665 44555
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH----H----CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~----~----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
.+||++||.+..... .....|+.+|..++.+.+ + .|+.++.|+||++..+...... .+. ....
T Consensus 136 g~iV~isS~~~~~~~------p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~--~~~-~~~~ 206 (330)
T PRK06139 136 GIFINMISLGGFAAQ------PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA--NYT-GRRL 206 (330)
T ss_pred CEEEEEcChhhcCCC------CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc--ccc-cccc
Confidence 689999987654321 124579999997665554 2 3799999999999776432111 110 0011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
......++.+|+|++++.++.++.
T Consensus 207 ~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 207 TPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred cCCCCCCCHHHHHHHHHHHHhCCC
Confidence 112236799999999999998665
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.6e-07 Score=85.71 Aligned_cols=164 Identities=16% Similarity=0.098 Sum_probs=105.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++.++.+|+.|.+.+..+++ .+|+||||+|...... .++...+++|+.+...+++++.. .+
T Consensus 69 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 148 (262)
T PRK07831 69 GRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH 148 (262)
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 358899999999988776653 6899999999643211 12333456788888777776543 33
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~i~~~~~ 149 (404)
-.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++.+...... ...+.....
T Consensus 149 ~g~iv~~ss~~~~~~~------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~ 222 (262)
T PRK07831 149 GGVIVNNASVLGWRAQ------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAA 222 (262)
T ss_pred CcEEEEeCchhhcCCC------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHh
Confidence 3578888886543321 2235799999999988763 5899999999999865322110 000000011
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEc
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIA 185 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~ 185 (404)
...+..+...+|||++++.++.+.. +.-|+++.+.+
T Consensus 223 ~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 223 REAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred cCCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence 1223446789999999999997653 22455665544
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.3e-07 Score=84.42 Aligned_cols=164 Identities=13% Similarity=0.060 Sum_probs=105.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH-----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA-----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa-----~~ag 77 (404)
.++.++.+|+.|.+++..+++ ..|++||++|..... ..++...+.+|+.+..++++++ ++.+
T Consensus 48 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 127 (239)
T TIGR01831 48 GNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ 127 (239)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC
Confidence 468999999999988776653 579999999875321 1234445778999988888765 2345
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
..+||++||....... .....|+.+|..++.+.+ ..|+.++.|+||++..+....... ........
T Consensus 128 ~~~iv~vsS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~ 200 (239)
T TIGR01831 128 GGRIITLASVSGVMGN------RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH-DLDEALKT 200 (239)
T ss_pred CeEEEEEcchhhccCC------CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhH-HHHHHHhc
Confidence 5689999997543221 123468889987766554 258999999999987653221000 00000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...+.+...+|||+++++++.+.. +..+.++.+.++
T Consensus 201 ~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 237 (239)
T TIGR01831 201 VPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG 237 (239)
T ss_pred CCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence 112335688999999999997643 333445544443
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=6.5e-07 Score=84.74 Aligned_cols=166 Identities=12% Similarity=0.049 Sum_probs=106.6
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++.++.+|+.|.+++.+++ .++|+|||++|..... ..++...+++|+.+..+|++++.+ .+
T Consensus 50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 129 (252)
T PRK07677 50 GQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI 129 (252)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC
Confidence 46889999999998887655 3689999999854211 112344578899999998888743 22
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH--------CCCCEEEEEcCccCCCCCCc---cCcccEEE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA--------SGLPYTIVRPGGMERPTDAY---KETHNITL 146 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~--------~gl~~tIlRpg~~~G~~~~~---~~~~~i~~ 146 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++.+..... ........
T Consensus 130 ~g~ii~isS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~ 203 (252)
T PRK07677 130 KGNIINMVATYAWDAG------PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKR 203 (252)
T ss_pred CEEEEEEcChhhccCC------CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHH
Confidence 3589999987653321 1224688999988877662 48999999999997422110 00000000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
......++.+...+|+|+++..++.... ...++++.+.++.
T Consensus 204 ~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 204 TIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred HhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence 0011122346789999999999887542 3346666666553
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=6e-07 Score=91.92 Aligned_cols=190 Identities=12% Similarity=0.091 Sum_probs=127.7
Q ss_pred CCCCeEEEEcCCCCH------hhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEecc
Q 015570 14 PVEMLELVECDLEKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSS 86 (404)
Q Consensus 14 ~~~gveiV~gDl~d~------~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS 86 (404)
...++..|.||+.+. .++....+.+|+|||+|+...+.+. -.....+|..|++++++.|++. +.+-||++|+
T Consensus 77 ~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~-l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVST 155 (467)
T KOG1221|consen 77 ALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEP-LDVALGINTRGTRNVLQLAKEMVKLKALVHVST 155 (467)
T ss_pred ceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchh-hhhhhhhhhHhHHHHHHHHHHhhhhheEEEeeh
Confidence 457889999998765 4455566799999999998765422 1233578999999999999985 6778999999
Q ss_pred CcccCCC-----------C---chh--------------------hcccchHHHHHHHHHHHHHHH--CCCCEEEEEcCc
Q 015570 87 LGTNKFG-----------F---PAA--------------------ILNLFWGVLLWKRKAEEALIA--SGLPYTIVRPGG 130 (404)
Q Consensus 87 ~gv~~~~-----------~---~~~--------------------~~~~~~~y~~sK~~~E~~l~~--~gl~~tIlRpg~ 130 (404)
..++-.. . +.. .......|.-+|..+|+++.+ .+++.+|+||+.
T Consensus 156 Ay~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsi 235 (467)
T KOG1221|consen 156 AYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSI 235 (467)
T ss_pred hheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCc
Confidence 8774110 0 000 011123688899999999986 689999999998
Q ss_pred cCCCCCC----cc----C-c--------ccEE-EccCCccccCcccHHHHHHHHHHHHhCCCCC----CCcEEEEEcCCC
Q 015570 131 MERPTDA----YK----E-T--------HNIT-LSQEDTLFGGQVSNLQVAELLACMAKNRSLS----YCKVVEVIAETT 188 (404)
Q Consensus 131 ~~G~~~~----~~----~-~--------~~i~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~----~~~i~nI~~~~~ 188 (404)
+.....+ |. . . +.++ +..+.....+.|.+|.|+.+++.+.-..... ...+||+++.+
T Consensus 236 I~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~- 314 (467)
T KOG1221|consen 236 ITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSN- 314 (467)
T ss_pred eeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccc-
Confidence 8642211 11 0 1 1111 1112233345789999999987655221111 24599999865
Q ss_pred CCCccHHHHHHHccccc
Q 015570 189 APLTPMEELLAKIPSQR 205 (404)
Q Consensus 189 ~~~~si~ell~~i~~~~ 205 (404)
.+.++|.++.+......
T Consensus 315 ~Np~t~~~~~e~~~~~~ 331 (467)
T KOG1221|consen 315 DNPVTWGDFIELALRYF 331 (467)
T ss_pred cCcccHHHHHHHHHHhc
Confidence 57888999988776654
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.5e-07 Score=84.69 Aligned_cols=166 Identities=16% Similarity=0.102 Sum_probs=106.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|+.|.+++..++. .+|+|||++|...... .++...+++|+.+..++++++. +.+.
T Consensus 54 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 133 (263)
T PRK08226 54 HRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKD 133 (263)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 467889999999988877654 6799999999753211 1122236788888888888764 3455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc----C--cc--c
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----E--TH--N 143 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----~--~~--~ 143 (404)
.+||++||........ .....|+.+|...|.+++. .|+.++.|+||++.++..... . .. .
T Consensus 134 ~~iv~isS~~~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~ 208 (263)
T PRK08226 134 GRIVMMSSVTGDMVAD-----PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESV 208 (263)
T ss_pred cEEEEECcHHhcccCC-----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHH
Confidence 6899999865432111 1235799999988877763 479999999999976532110 0 00 0
Q ss_pred EEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 144 ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 144 i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
+...........+...+|+|+++..++.... +..++++.+.++
T Consensus 209 ~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 209 LTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence 0000011122345689999999999886532 334556655554
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-06 Score=84.17 Aligned_cols=165 Identities=15% Similarity=0.106 Sum_probs=104.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C-CC-----CCCcchhhHHHHHHHHHHH----HHhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E-VF-----DITGPYRIDFQATKNLVDA----ATIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~-~~-----d~~~~~~vnv~~~~~Ll~A----a~~ag 77 (404)
.++.++.+|+.|.+++..+++ ++|++||++|.... . .. ++...+.+|+.+...++++ +++.+
T Consensus 54 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 133 (272)
T PRK08589 54 GKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG 133 (272)
T ss_pred CeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 368899999999988776553 68999999997532 1 11 1223345677766655554 44445
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Ccc------c
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETH------N 143 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~------~ 143 (404)
.++|++||....... .....|+.+|..++.+++. .|+.++.|+||++..+..... ... .
T Consensus 134 -g~iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 206 (272)
T PRK08589 134 -GSIINTSSFSGQAAD------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKT 206 (272)
T ss_pred -CEEEEeCchhhcCCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHH
Confidence 689999997654321 1235799999999888763 589999999999875432110 000 0
Q ss_pred EE-EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 144 IT-LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 144 i~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+. ........+.+...+|||++++.++.+.. ...++++.+.++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 207 FRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred HhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence 00 00001122345789999999999997543 3346677766653
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.5e-07 Score=84.07 Aligned_cols=165 Identities=13% Similarity=0.050 Sum_probs=102.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHH----HHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKN----LVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~----Ll~Aa~~agV 78 (404)
.++.++.+|+.|.+++.++++ .+|+|||++|...... .++...+++|+.+... +++.+++.+.
T Consensus 57 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~ 136 (261)
T PRK08936 57 GEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI 136 (261)
T ss_pred CeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 357789999999988776653 6899999999753211 1223345777766654 4555555543
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEcc
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQ 148 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~ 148 (404)
.+||++||....... ..+..|+.+|..++.+.+. .|+.++.|+||++..+..... .........
T Consensus 137 ~g~iv~~sS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 210 (261)
T PRK08936 137 KGNIINMSSVHEQIPW------PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVE 210 (261)
T ss_pred CcEEEEEccccccCCC------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHH
Confidence 589999997543321 2245799999777766542 589999999999976532110 000000000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
.....+.+...+|+++++.+++...... .+..+.+.++
T Consensus 211 ~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 211 SMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred hcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence 1112234678999999999998764323 3445554444
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.6e-06 Score=81.03 Aligned_cols=162 Identities=12% Similarity=0.050 Sum_probs=103.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHH----HHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLV----DAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll----~Aa~~agV 78 (404)
.++.++.+|+.|.+++.+++. ..|+|||++|...... .++...+++|+.+...+. ..+++.+-
T Consensus 68 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 147 (256)
T PRK12859 68 VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSG 147 (256)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence 357789999999988876653 5799999998753211 122334677888777664 44444444
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... ..+..|+.+|..++.+.+. .|+.++.|+||++............+ ....
T Consensus 148 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~---~~~~ 218 (256)
T PRK12859 148 GRIINMTSGQFQGPM------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGL---LPMF 218 (256)
T ss_pred eEEEEEcccccCCCC------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHH---HhcC
Confidence 599999998653321 2346799999999877653 57999999999986532110000000 0111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.+..+...+|+|++++.++.... +..++++.+.++
T Consensus 219 ~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 219 PFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 12235688999999999986543 334556655444
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=9e-07 Score=80.82 Aligned_cols=147 Identities=15% Similarity=0.072 Sum_probs=99.5
Q ss_pred EEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCc
Q 015570 20 LVECDLEKRVQIEPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG 88 (404)
Q Consensus 20 iV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~g 88 (404)
.+.+|+.|.+++.++++ ++|+|||++|...... .++...+.+|+.+..++++++... +..+||++|+..
T Consensus 35 ~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 35 DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 57899999998887765 7899999999643211 123334567888888888877642 335799999876
Q ss_pred ccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHH
Q 015570 89 TNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV 162 (404)
Q Consensus 89 v~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DV 162 (404)
..... ..+..|+.+|..++.+.+. .|+.+..|+||++-...... .. .+ . ....+..+|+
T Consensus 115 ~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~---~~-~~--~---~~~~~~~~~~ 179 (199)
T PRK07578 115 SDEPI------PGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY---GP-FF--P---GFEPVPAARV 179 (199)
T ss_pred cCCCC------CCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhh---hh-cC--C---CCCCCCHHHH
Confidence 53221 2235799999888877652 58999999999985432110 00 00 1 1235899999
Q ss_pred HHHHHHHHhCCCCCCCcEEEE
Q 015570 163 AELLACMAKNRSLSYCKVVEV 183 (404)
Q Consensus 163 A~ai~~~l~~~~~~~~~i~nI 183 (404)
|+++..++.+. ..+++|++
T Consensus 180 a~~~~~~~~~~--~~g~~~~~ 198 (199)
T PRK07578 180 ALAYVRSVEGA--QTGEVYKV 198 (199)
T ss_pred HHHHHHHhccc--eeeEEecc
Confidence 99999999754 34566654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.7e-07 Score=85.16 Aligned_cols=154 Identities=18% Similarity=0.104 Sum_probs=98.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-----------CCCEEEEcCcCCCCC-C------CCCCcchhhHHHHHHHH----HHHH
Q 015570 16 EMLELVECDLEKRVQIEPALG-----------NASVVICCIGASEKE-V------FDITGPYRIDFQATKNL----VDAA 73 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-----------gvDvVI~~ag~~~~~-~------~d~~~~~~vnv~~~~~L----l~Aa 73 (404)
.+++++.+|+.|.+++.+++. ..|++||++|..... . .++...+.+|+.+...+ ++.+
T Consensus 45 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 124 (243)
T PRK07023 45 ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAA 124 (243)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHh
Confidence 368899999999988877432 478999999875321 1 12234456777775554 4444
Q ss_pred HhCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCccc---E
Q 015570 74 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHN---I 144 (404)
Q Consensus 74 ~~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~---i 144 (404)
++.+..+||++||....... ..+..|+.+|..+|.+++. .|+.+.+|+||++-.+......... .
T Consensus 125 ~~~~~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~ 198 (243)
T PRK07023 125 SDAAERRILHISSGAARNAY------AGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERF 198 (243)
T ss_pred hccCCCEEEEEeChhhcCCC------CCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccc
Confidence 55556799999998664322 2346899999999998872 4899999999998543211000000 0
Q ss_pred EE---ccCCccccCcccHHHHHHHHHHHHhCCCC
Q 015570 145 TL---SQEDTLFGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 145 ~~---~~~~~~~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
.. .......+..+..+|+|+.++..+..+.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~ 232 (243)
T PRK07023 199 PMRERFRELKASGALSTPEDAARRLIAYLLSDDF 232 (243)
T ss_pred hHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcccc
Confidence 00 00001123467899999988777776663
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.6e-06 Score=81.29 Aligned_cols=187 Identities=13% Similarity=-0.057 Sum_probs=129.7
Q ss_pred CCCCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCC--CCCCCCCcchhhHHHHHHHHHHHHHhCCC--CEEEEecc
Q 015570 13 QPVEMLELVECDLEKRVQIEPALG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSS 86 (404)
Q Consensus 13 ~~~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~--~~~~d~~~~~~vnv~~~~~Ll~Aa~~agV--krfI~vSS 86 (404)
....+++++.|||+|...+.++++ ..|.|+|+++.+. .+...+.....++-.|+.+|+++.+-.|- -||.+.||
T Consensus 52 ~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQASt 131 (345)
T COG1089 52 LNDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQAST 131 (345)
T ss_pred cCCceeEEEeccccchHHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEeccc
Confidence 344669999999999999999987 6799999998763 22345566678889999999999998764 38888998
Q ss_pred CcccCCC-----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCC-ccCc---------------
Q 015570 87 LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDA-YKET--------------- 141 (404)
Q Consensus 87 ~gv~~~~-----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~-~~~~--------------- 141 (404)
...++.. .+..+..+..+|+.+|.-+..+... .||-.+.-+..+=.++... ...+
T Consensus 132 SE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q 211 (345)
T COG1089 132 SELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQ 211 (345)
T ss_pred HHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHcccc
Confidence 8665532 2233455678999999888776653 4664443333322222111 0001
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
..+.++ .-...++|-+..|..++|+.+|+.+. ...|.|..+++ .+++|+++...+..|
T Consensus 212 ~~l~lG-NldAkRDWG~A~DYVe~mwlmLQq~~---PddyViATg~t---~sVrefv~~Af~~~g 269 (345)
T COG1089 212 DKLYLG-NLDAKRDWGHAKDYVEAMWLMLQQEE---PDDYVIATGET---HSVREFVELAFEMVG 269 (345)
T ss_pred ceEEec-cccccccccchHHHHHHHHHHHccCC---CCceEEecCce---eeHHHHHHHHHHHcC
Confidence 112222 23345678999999999999998876 78899998887 677777666665555
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.5e-06 Score=82.49 Aligned_cols=162 Identities=12% Similarity=0.031 Sum_probs=100.5
Q ss_pred EEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC---C-----CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 19 ELVECDLEKRVQIEPALG-------NASVVICCIGASEKE---V-----FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~---~-----~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
+++.+|+.|.+++.++++ ++|+|||++|..... . .++...+++|+.+..++++.+ ++.+..
T Consensus 54 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g 133 (255)
T PRK06057 54 LFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKG 133 (255)
T ss_pred cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCc
Confidence 688999999988887765 679999999875321 0 112344567877776666554 345556
Q ss_pred EEEEeccCcc-cCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCc---ccEEEcc
Q 015570 80 HFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET---HNITLSQ 148 (404)
Q Consensus 80 rfI~vSS~gv-~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~---~~i~~~~ 148 (404)
++|++||... .+.. ..+..|+.+|..++.+.+ ..|+.+++||||++.++....... .......
T Consensus 134 ~iv~~sS~~~~~g~~------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~ 207 (255)
T PRK06057 134 SIINTASFVAVMGSA------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRL 207 (255)
T ss_pred EEEEEcchhhccCCC------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHH
Confidence 8999988643 3221 123469999977666554 258999999999998753211000 0000000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
.....+.+...+|+|++++.++.+.... .+..+.+.++
T Consensus 208 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 208 VHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGG 246 (255)
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 0011234688999999999888764423 3556655544
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=8.6e-07 Score=84.81 Aligned_cols=166 Identities=14% Similarity=0.042 Sum_probs=106.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC---CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA---KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a---gVk 79 (404)
.++.++.+|++|.+++.++++ ++|+|||++|..... ..++...+.+|+.+..++++++... .-.
T Consensus 58 ~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g 137 (264)
T PRK07576 58 PEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGA 137 (264)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 356789999999988877654 579999999854211 1122234568999999998877542 125
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCC-CC-ccCcccEE-EccC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT-DA-YKETHNIT-LSQE 149 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~-~~-~~~~~~i~-~~~~ 149 (404)
+||++||....... .....|..+|..+|.+++. .|+.++.|+||++.+.. .. ......+. ....
T Consensus 138 ~iv~iss~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~ 211 (264)
T PRK07576 138 SIIQISAPQAFVPM------PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQ 211 (264)
T ss_pred EEEEECChhhccCC------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHh
Confidence 89999997543221 2235799999999888863 57899999999986421 10 00000000 0001
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~ 187 (404)
....+.++..+|||++++.++..... ..+..+.+.++.
T Consensus 212 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~ 250 (264)
T PRK07576 212 SVPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGGW 250 (264)
T ss_pred cCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence 11223467899999999999976432 245566665553
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.3e-06 Score=84.22 Aligned_cols=169 Identities=14% Similarity=0.130 Sum_probs=108.2
Q ss_pred CeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCc
Q 015570 17 MLELVECDLEKRVQIEPALG------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG 88 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~g 88 (404)
++.++.+|+.|.+++.++++ ++|+|||++|.... ..++...+++|+.+..++++++... .-.++|++||..
T Consensus 50 ~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~-~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 50 DVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSPS-QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred eEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCc-hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 57889999999988877663 68999999997532 2456677899999999998887642 113456777764
Q ss_pred ccCCC-C-----------------------chhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC
Q 015570 89 TNKFG-F-----------------------PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA 137 (404)
Q Consensus 89 v~~~~-~-----------------------~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~ 137 (404)
..... . .......+..|+.+|...+.+.+. .|+.+..|+||++..+...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~ 208 (275)
T PRK06940 129 GHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQ 208 (275)
T ss_pred cccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccch
Confidence 43221 0 000001245799999998877652 5899999999999764321
Q ss_pred c--cCc--ccEEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 138 Y--KET--HNITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 138 ~--~~~--~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
. ... ............+.+...+|||++++.++.+. .+..++++.+-++
T Consensus 209 ~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg 262 (275)
T PRK06940 209 DELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262 (275)
T ss_pred hhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence 0 000 00000001112234678999999999999654 3334566666555
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.3e-07 Score=85.40 Aligned_cols=165 Identities=10% Similarity=0.006 Sum_probs=100.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC---------C---CCCCcchhhHHHHHH----HHHHH
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE---------V---FDITGPYRIDFQATK----NLVDA 72 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~---------~---~d~~~~~~vnv~~~~----~Ll~A 72 (404)
.++.++.+|++|.+++.+++. ++|+|||++|..... . .++...+.+|+.+.. .++..
T Consensus 59 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 138 (260)
T PRK08416 59 IKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKR 138 (260)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 367899999999988776653 689999999853210 0 011122344554433 34444
Q ss_pred HHhCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE
Q 015570 73 ATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI 144 (404)
Q Consensus 73 a~~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i 144 (404)
+++.+..+||++||.+..... ..+..|+.+|..++.+.+. .|+.+..|+||++..+....... ...
T Consensus 139 ~~~~~~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~ 212 (260)
T PRK08416 139 MEKVGGGSIISLSSTGNLVYI------ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEV 212 (260)
T ss_pred hhccCCEEEEEEeccccccCC------CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHH
Confidence 555555699999997643221 1235799999999888863 58999999999985432110000 000
Q ss_pred -EEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 145 -TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 145 -~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...........+...+|+|++++.++.... +..++.+.+.++
T Consensus 213 ~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 213 KAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 000001112346789999999999987543 234566665544
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.3e-06 Score=81.85 Aligned_cols=162 Identities=9% Similarity=0.020 Sum_probs=101.6
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCC--
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK-- 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag-- 77 (404)
+++++.+|+.|.+++..++ .++|+|||++|..... ..++...+++|+.+...+++++. +.+
T Consensus 47 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~ 126 (236)
T PRK06483 47 GAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHA 126 (236)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCC
Confidence 4788999999998876654 3589999999974221 11233345677777665555443 333
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
..++|++||....... ..+..|+.+|..+|.+++. .++.+..|+||++............ ... ...
T Consensus 127 ~g~iv~~ss~~~~~~~------~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~-~~~-~~~ 198 (236)
T PRK06483 127 ASDIIHITDYVVEKGS------DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQ-KAL-AKS 198 (236)
T ss_pred CceEEEEcchhhccCC------CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHH-HHh-ccC
Confidence 4589999887543221 1235799999999988873 3588999999987432111000000 000 111
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
....+...+|||+++..++.. .+..++++.+.++.
T Consensus 199 ~~~~~~~~~~va~~~~~l~~~-~~~~G~~i~vdgg~ 233 (236)
T PRK06483 199 LLKIEPGEEEIIDLVDYLLTS-CYVTGRSLPVDGGR 233 (236)
T ss_pred ccccCCCHHHHHHHHHHHhcC-CCcCCcEEEeCccc
Confidence 122345789999999999974 33456777776653
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.4e-06 Score=84.98 Aligned_cols=153 Identities=14% Similarity=0.042 Sum_probs=101.5
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC---CCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA---KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a---gVk 79 (404)
..+..+.+|++|.+++.+++ ..+|+|||++|...... .++...+++|+.+..++++++... +..
T Consensus 57 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g 136 (296)
T PRK05872 57 DRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRG 136 (296)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 34566779999998877664 46899999999753211 122344678999999988877531 235
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc--cEE-Ecc-
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--NIT-LSQ- 148 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~--~i~-~~~- 148 (404)
+||++||.+..... ..+..|+.+|..++.+.+. .|+.+++++||++..+........ .+. +..
T Consensus 137 ~iv~isS~~~~~~~------~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~ 210 (296)
T PRK05872 137 YVLQVSSLAAFAAA------PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRAR 210 (296)
T ss_pred EEEEEeCHhhcCCC------CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhh
Confidence 89999998664322 2246799999999888753 689999999999865422110000 000 000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.......++..+|+|++++.++.+..
T Consensus 211 ~~~p~~~~~~~~~va~~i~~~~~~~~ 236 (296)
T PRK05872 211 LPWPLRRTTSVEKCAAAFVDGIERRA 236 (296)
T ss_pred CCCcccCCCCHHHHHHHHHHHHhcCC
Confidence 00122346799999999999997654
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.8e-07 Score=86.07 Aligned_cols=161 Identities=14% Similarity=0.046 Sum_probs=98.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCC-----------CEEEEcCcCCCCC--C-----CCCCcchhhHHHHHHH----HHHHH
Q 015570 16 EMLELVECDLEKRVQIEPALGNA-----------SVVICCIGASEKE--V-----FDITGPYRIDFQATKN----LVDAA 73 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gv-----------DvVI~~ag~~~~~--~-----~d~~~~~~vnv~~~~~----Ll~Aa 73 (404)
.+++++.+|++|.+++.++++.+ +++||++|..... . .++...+++|+.+... ++..+
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 127 (251)
T PRK06924 48 SNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHT 127 (251)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHH
Confidence 57889999999998888766422 2789999864211 0 1122234556666444 44444
Q ss_pred HhC-CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCcc---C
Q 015570 74 TIA-KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYK---E 140 (404)
Q Consensus 74 ~~a-gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~---~ 140 (404)
++. +.++||++||....... .....|+.+|..++.+++. .++.+..|+||++..+..... .
T Consensus 128 ~~~~~~~~iv~~sS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~ 201 (251)
T PRK06924 128 KDWKVDKRVINISSGAAKNPY------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSS 201 (251)
T ss_pred hccCCCceEEEecchhhcCCC------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcC
Confidence 443 34689999997654322 3356899999999988752 368899999998865321100 0
Q ss_pred cccEE---EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEE
Q 015570 141 THNIT---LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE 182 (404)
Q Consensus 141 ~~~i~---~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~n 182 (404)
..... ........+.+.+.+|||+.++.++.+.....|+.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~G~~~~ 246 (251)
T PRK06924 202 KEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETEDFPNGEVID 246 (251)
T ss_pred cccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcccCCCCCEee
Confidence 00000 0000001234689999999999999875433455544
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.7e-06 Score=82.01 Aligned_cols=163 Identities=13% Similarity=0.131 Sum_probs=103.5
Q ss_pred EEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC----------CCCCCcchhhHHHHHHHHHHHHHhC--CCC
Q 015570 19 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATIA--KVN 79 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~----------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVk 79 (404)
..+.+|+.|.+++..++ ..+|++||+||..... ..+|...+.+|+.+..++++++... +-.
T Consensus 60 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G 139 (271)
T PRK06505 60 FVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGG 139 (271)
T ss_pred eEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCc
Confidence 47899999998877654 4789999999975310 1123344678888877777665431 114
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cc-ccEEEccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET-HNITLSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~-~~i~~~~~~ 150 (404)
++|++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+..... .. .........
T Consensus 140 ~Iv~isS~~~~~~~------~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~ 213 (271)
T PRK06505 140 SMLTLTYGGSTRVM------PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRN 213 (271)
T ss_pred eEEEEcCCCccccC------CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhc
Confidence 89999987643211 2235799999999887763 589999999999865422100 00 000000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...+.+...+|||++++.++.... +..++++.+.++.
T Consensus 214 ~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 214 SPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred CCccccCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence 122345788999999999997543 2346666666653
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.2e-06 Score=83.58 Aligned_cols=165 Identities=12% Similarity=0.090 Sum_probs=106.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC---------------CCCCCcchhhHHHHHHHHHHHH
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE---------------VFDITGPYRIDFQATKNLVDAA 73 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~---------------~~d~~~~~~vnv~~~~~Ll~Aa 73 (404)
.++.++.+|+.|.+++.++++ .+|+||||+|..... ..++...+++|+.+...+++++
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 128 (266)
T PRK06171 49 ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAV 128 (266)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHH
Confidence 468899999999988776654 689999999964221 1122334678888888888877
Q ss_pred Hh----CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCC-CCCC--cc
Q 015570 74 TI----AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMER-PTDA--YK 139 (404)
Q Consensus 74 ~~----agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G-~~~~--~~ 139 (404)
.. .+..+||++||....... .....|+.+|..++.+++. .|+.+.+|+||++.. .... ..
T Consensus 129 ~~~~~~~~~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~ 202 (266)
T PRK06171 129 ARQMVKQHDGVIVNMSSEAGLEGS------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYE 202 (266)
T ss_pred HHHHHhcCCcEEEEEccccccCCC------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhh
Confidence 64 344589999997654321 1235799999999887763 589999999998842 1110 00
Q ss_pred Cc---------ccE--EEcc-CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 140 ET---------HNI--TLSQ-EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 140 ~~---------~~i--~~~~-~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.. ..+ .+.. .....+.+...+|||++++.++.+.. +..++++.+.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 203 EALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred hhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 00 000 0000 01122346788999999999987543 234666666555
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.3e-06 Score=92.30 Aligned_cols=144 Identities=14% Similarity=0.178 Sum_probs=102.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC--------CCCCcchhhHHHHHHHHHHHH----HhC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAA----TIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~--------~d~~~~~~vnv~~~~~Ll~Aa----~~a 76 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|...... .++...+.+|+.+..++++++ ++.
T Consensus 420 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 499 (657)
T PRK07201 420 GTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER 499 (657)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 468899999999998887765 6899999999742111 122344678888877765554 556
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
+..+||++||.+++... ..+..|+.+|..++.+++. .|+.+++|+||++..+..... .. .
T Consensus 500 ~~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~--~~--~--- 566 (657)
T PRK07201 500 RFGHVVNVSSIGVQTNA------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT--KR--Y--- 566 (657)
T ss_pred CCCEEEEECChhhcCCC------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc--cc--c---
Confidence 77799999998765432 2245799999999888763 589999999999976532211 00 0
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.....++.+++|+.++..+.+..
T Consensus 567 --~~~~~~~~~~~a~~i~~~~~~~~ 589 (657)
T PRK07201 567 --NNVPTISPEEAADMVVRAIVEKP 589 (657)
T ss_pred --cCCCCCCHHHHHHHHHHHHHhCC
Confidence 11235799999999999886543
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.8e-06 Score=81.74 Aligned_cols=148 Identities=10% Similarity=0.003 Sum_probs=100.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|+++.+++.++++ ++|+|||++|...... .++...+++|+.+..++++++.. .+-
T Consensus 62 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~ 141 (273)
T PRK08278 62 GQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSEN 141 (273)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCC
Confidence 357889999999988877654 7899999999753211 12233467899999999888853 233
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCC-CCCCccCcccEEEccCC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMER-PTDAYKETHNITLSQED 150 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G-~~~~~~~~~~i~~~~~~ 150 (404)
.++|++|+....... ....+..|+.+|..+|.+++. .|+.++.|+||++.. ... ..+. ...
T Consensus 142 g~iv~iss~~~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~-----~~~~--~~~ 210 (273)
T PRK08278 142 PHILTLSPPLNLDPK----WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAV-----RNLL--GGD 210 (273)
T ss_pred CEEEEECCchhcccc----ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHH-----Hhcc--ccc
Confidence 478888876432211 012346799999999998873 589999999995432 111 0110 111
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.....+...+|+|+.++.++....
T Consensus 211 ~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 211 EAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred ccccccCCHHHHHHHHHHHhcCcc
Confidence 122346799999999999997654
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.5e-06 Score=94.49 Aligned_cols=165 Identities=11% Similarity=0.085 Sum_probs=105.7
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHH----HHHHhCCC-
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLV----DAATIAKV- 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll----~Aa~~agV- 78 (404)
++..+.+|++|.+++..++. ++|+|||++|...... .++...+++|+.+...++ ..+++.+.
T Consensus 466 ~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~ 545 (676)
T TIGR02632 466 RAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG 545 (676)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 57789999999998887765 7899999999753211 112333556666655554 44444442
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc--------c
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--------N 143 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~--------~ 143 (404)
.+||++||....... .....|+.+|..++.+++. .|+.+..|+||.++.....+.... .
T Consensus 546 g~IV~iSS~~a~~~~------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~ 619 (676)
T TIGR02632 546 GNIVFIASKNAVYAG------KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYG 619 (676)
T ss_pred CEEEEEeChhhcCCC------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhccc
Confidence 489999997543221 1246899999999988863 479999999998863211111000 0
Q ss_pred EE------EccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 144 IT------LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 144 i~------~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
+. ........+.+++.+|||++++.++.+. ....++++++.++.
T Consensus 620 ~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~ 670 (676)
T TIGR02632 620 IPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV 670 (676)
T ss_pred CChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence 00 0111222345689999999999998643 33347788887765
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.1e-06 Score=81.54 Aligned_cols=165 Identities=15% Similarity=0.046 Sum_probs=105.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVkrfI 82 (404)
.++.++.+|++|.+++..+++ .+|++|||+|...... .++...+.+|+.+..++++++ ++.+-.++|
T Consensus 57 ~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 136 (259)
T PRK06125 57 VDVAVHALDLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIV 136 (259)
T ss_pred CceEEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 468899999999988877654 6999999999753211 122334567888777776655 444445899
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc--cCcc--------cEE
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETH--------NIT 145 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~--~~~~--------~i~ 145 (404)
++||....... ..+..|..+|..++.+.+. .|+.++.|+||.+..+.... .... .+.
T Consensus 137 ~iss~~~~~~~------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~ 210 (259)
T PRK06125 137 NVIGAAGENPD------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQ 210 (259)
T ss_pred EecCccccCCC------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHH
Confidence 99887553321 2245688899988777763 58999999999987542110 0000 000
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~ 186 (404)
........+.+...+|||++++.++.+... ..+.++.+.++
T Consensus 211 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg 252 (259)
T PRK06125 211 ELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGG 252 (259)
T ss_pred HHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCC
Confidence 000111123467899999999999875432 34566666655
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.46 E-value=9e-07 Score=92.86 Aligned_cols=165 Identities=16% Similarity=0.117 Sum_probs=109.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC-------CCCCCcchhhHHHHHHHHHHHHHhC--CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAATIA--KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVk 79 (404)
.++..+.+|+.|.+++.++++ .+|+||||+|..... ..++...+++|+.+..++++++... +..
T Consensus 315 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g 394 (520)
T PRK06484 315 DEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGG 394 (520)
T ss_pred CceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 356778999999988876653 589999999975211 1123445788999999888877653 335
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-ccc--EEEccC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THN--ITLSQE 149 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~--i~~~~~ 149 (404)
+||++||....... .....|+.+|..++.+.+. .|+.++.|+||++..+...... ... ......
T Consensus 395 ~iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 468 (520)
T PRK06484 395 VIVNLGSIASLLAL------PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRR 468 (520)
T ss_pred EEEEECchhhcCCC------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHh
Confidence 89999998664322 1235799999999887763 5899999999999765321100 000 000001
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+...+|||++++.++.... +..++++.+-++
T Consensus 469 ~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 469 RIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred cCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 1112345789999999999997543 334667766655
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.8e-06 Score=82.07 Aligned_cols=165 Identities=17% Similarity=0.130 Sum_probs=104.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-----C-----CCCCCcchhhHHHHHHHHHHHHHhC--
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-----E-----VFDITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-----~-----~~d~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
.++.++.+|++|.+++.+++ ..+|++||++|.... . ..++...+++|+.+...+++++...
T Consensus 55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~ 134 (252)
T PRK06079 55 EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN 134 (252)
T ss_pred CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc
Confidence 35789999999998877654 368999999997531 1 1123334567877777777766542
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC-ccCcccE-EEc
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETHNI-TLS 147 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~-~~~~~~i-~~~ 147 (404)
.-.++|++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+... ......+ ...
T Consensus 135 ~~g~Iv~iss~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~ 208 (252)
T PRK06079 135 PGASIVTLTYFGSERAI------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKES 208 (252)
T ss_pred cCceEEEEeccCccccC------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHH
Confidence 12489999987653221 1245799999999888863 5899999999999654211 0000000 000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+.+...+|||++++.++.... +..++++.+.++
T Consensus 209 ~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 209 DSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred HhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 011122346788999999999997643 334566655444
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=4e-06 Score=79.90 Aligned_cols=165 Identities=12% Similarity=0.067 Sum_probs=101.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHH----HHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNL----VDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~L----l~Aa~~agV 78 (404)
.++.++.+|+.|.+++.+++ .++|+|||++|...... .++...+++|+.+...+ +..+++.+.
T Consensus 59 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 138 (265)
T PRK07062 59 ARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAA 138 (265)
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCC
Confidence 36788999999998877654 36899999999753211 12333345665555444 444555556
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCc--c--Cccc--EE
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--K--ETHN--IT 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~--~--~~~~--i~ 145 (404)
.+||++||....... .....|..+|..++.+.+ ..|+.++.|+||++..+.... . .... +.
T Consensus 139 g~iv~isS~~~~~~~------~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~ 212 (265)
T PRK07062 139 ASIVCVNSLLALQPE------PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWE 212 (265)
T ss_pred cEEEEeccccccCCC------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChH
Confidence 799999998654321 123468888887766664 268999999999986542110 0 0000 00
Q ss_pred -----E-ccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 146 -----L-SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 146 -----~-~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
+ .......+.+...+|||++++.++.+. .+..++++.+.++
T Consensus 213 ~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 213 AWTAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred HHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 0 001112234678899999999998753 3334667766555
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.6e-06 Score=79.47 Aligned_cols=148 Identities=15% Similarity=0.039 Sum_probs=98.4
Q ss_pred CCeEEEEcCCCCHhhHHHHh------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agVk 79 (404)
.+++++.+|+.|.+++..++ .++|+|||++|...... .+....+++|+.++.++++++.. .+..
T Consensus 53 ~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~ 132 (263)
T PRK09072 53 GRHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSA 132 (263)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence 47899999999998877654 46899999998753211 11223456888888888877753 3456
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
++|++||....... .....|+.+|..++.+++. .|+.++.|.||++........ .. ......
T Consensus 133 ~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~----~~~~~~ 201 (263)
T PRK09072 133 MVVNVGSTFGSIGY------PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA-VQ----ALNRAL 201 (263)
T ss_pred EEEEecChhhCcCC------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhh-cc----cccccc
Confidence 89999886543221 1135699999988776642 578899999999865422110 00 000111
Q ss_pred ccCcccHHHHHHHHHHHHhCCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
....++.+|+|++++.++++..
T Consensus 202 ~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 202 GNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred cCCCCCHHHHHHHHHHHHhCCC
Confidence 1245789999999999998754
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=2e-06 Score=88.83 Aligned_cols=164 Identities=16% Similarity=0.063 Sum_probs=105.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhCCC----C
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKV----N 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~agV----k 79 (404)
+.+++.+|++|.+++..+++ ++|+|||++|..... ..++...+.+|+.+..+|++++..... .
T Consensus 257 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g 336 (450)
T PRK08261 257 GGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG 336 (450)
T ss_pred CCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCC
Confidence 44688999999988776653 689999999976422 122344567899999999999876432 6
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE-EccCCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDT 151 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~-~~~~~~ 151 (404)
+||++||....... .....|+.+|..++.+++. .|+.+..|+||++........ ..... ......
T Consensus 337 ~iv~~SS~~~~~g~------~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~ 409 (450)
T PRK08261 337 RIVGVSSISGIAGN------RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI-PFATREAGRRMN 409 (450)
T ss_pred EEEEECChhhcCCC------CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc-chhHHHHHhhcC
Confidence 89999987543211 1235799999877766652 589999999999854211100 00000 000001
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.+......+|||+++++++.... +..++++.+.++.
T Consensus 410 ~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~~ 446 (450)
T PRK08261 410 SLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQS 446 (450)
T ss_pred CcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 11123467899999999986533 2346777776653
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.7e-06 Score=80.40 Aligned_cols=163 Identities=15% Similarity=0.074 Sum_probs=100.3
Q ss_pred CeEEEEcCCCCHhhH----HHH-------hCCCCEEEEcCcCCCCCC---CC--------------CCcchhhHHHHHHH
Q 015570 17 MLELVECDLEKRVQI----EPA-------LGNASVVICCIGASEKEV---FD--------------ITGPYRIDFQATKN 68 (404)
Q Consensus 17 gveiV~gDl~d~~~l----~~a-------L~gvDvVI~~ag~~~~~~---~d--------------~~~~~~vnv~~~~~ 68 (404)
++.++.+|++|.+.+ ..+ +.++|+|||++|...... .+ +...+++|+.+...
T Consensus 53 ~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~ 132 (267)
T TIGR02685 53 SAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYF 132 (267)
T ss_pred ceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHH
Confidence 466789999998644 222 247999999999642111 11 22346788888888
Q ss_pred HHHHHHhC----------CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCcc
Q 015570 69 LVDAATIA----------KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGM 131 (404)
Q Consensus 69 Ll~Aa~~a----------gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~ 131 (404)
+++++... +..++|++++...... ...+..|+.+|..++.+++. .|+.++.|+||++
T Consensus 133 l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~ 206 (267)
T TIGR02685 133 LIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQP------LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLS 206 (267)
T ss_pred HHHHHHHHhhhcccccCCCCeEEEEehhhhccCC------CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCc
Confidence 87765421 1236777777654321 12345799999999988863 5899999999998
Q ss_pred CCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 132 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 132 ~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
..+......... .+.........+...+|+|++++.++.+.. ...++.+.+.++
T Consensus 207 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg 261 (267)
T TIGR02685 207 LLPDAMPFEVQE-DYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGG 261 (267)
T ss_pred cCccccchhHHH-HHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCc
Confidence 644221110000 000000111235789999999999997653 234666666554
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.2e-06 Score=81.90 Aligned_cols=164 Identities=15% Similarity=0.152 Sum_probs=104.3
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-----C-----CCCCCcchhhHHHHHHHHHHHHHhC--C
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-----E-----VFDITGPYRIDFQATKNLVDAATIA--K 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-----~-----~~d~~~~~~vnv~~~~~Ll~Aa~~a--g 77 (404)
.+.++.+|+.|.+++..++ ..+|++|||+|.... . ..++...+++|+.+...+++++... .
T Consensus 60 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~ 139 (258)
T PRK07370 60 PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE 139 (258)
T ss_pred cceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh
Confidence 4678899999998887655 368999999996421 1 1123445677888877776665431 1
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC--cccEEEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNITLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--~~~i~~~~ 148 (404)
-.+||++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+...... ...+....
T Consensus 140 ~g~Iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~ 213 (258)
T PRK07370 140 GGSIVTLTYLGGVRAI------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVE 213 (258)
T ss_pred CCeEEEEeccccccCC------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhh
Confidence 2589999997653221 2245799999999888763 5799999999999654211000 00000000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.......+...+|||++++.++.+.. +..++++.+.++
T Consensus 214 ~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 214 EKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred hcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence 11122346678999999999997543 234566666554
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.9e-06 Score=90.94 Aligned_cols=152 Identities=11% Similarity=-0.007 Sum_probs=100.6
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC-C
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-V 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag-V 78 (404)
+++++.+|++|.+.+.++++ .+|+||||+|...... .++...+++|+.+..++++++. +.+ -
T Consensus 365 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~ 444 (582)
T PRK05855 365 VAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTG 444 (582)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 68899999999988877654 5899999999853221 1233446789888888777653 333 2
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE------
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT------ 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~------ 145 (404)
.+||++||..++... .....|+.+|..++.+.+. .|+.++.|+||++-.+...........
T Consensus 445 g~iv~~sS~~~~~~~------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 518 (582)
T PRK05855 445 GHIVNVASAAAYAPS------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEAR 518 (582)
T ss_pred cEEEEECChhhccCC------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhh
Confidence 589999998765432 2346799999998877652 589999999999865322110000000
Q ss_pred --EccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 146 --LSQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 146 --~~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...........+..+|||+.+++++.+..
T Consensus 519 ~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 519 RRGRADKLYQRRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred HHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence 00000011123578999999999998655
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.4e-06 Score=81.34 Aligned_cols=165 Identities=14% Similarity=0.125 Sum_probs=107.0
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC----------CCCCCCcchhhHHHHHHHHHHHHHhC--C
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--K 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~----------~~~d~~~~~~vnv~~~~~Ll~Aa~~a--g 77 (404)
.+.++.+|+.|.+++.+++ ..+|++||+||.... ...++...+++|+.+...+++++... +
T Consensus 61 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 140 (272)
T PRK08159 61 AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD 140 (272)
T ss_pred CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 3567899999998877654 368999999997531 01133445688998888888876642 2
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~~ 148 (404)
-.++|++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++.......... ... ....
T Consensus 141 ~g~Iv~iss~~~~~~~------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~ 214 (272)
T PRK08159 141 GGSILTLTYYGAEKVM------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNE 214 (272)
T ss_pred CceEEEEeccccccCC------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHH
Confidence 2589999987553221 2245799999999888763 57999999999986532110000 000 0000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.....+.+...+|||+++++++.... +..++++.+.++.
T Consensus 215 ~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 215 YNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred hCCcccccCCHHHHHHHHHHHhCccccCccceEEEECCCc
Confidence 01122345788999999999997643 3345666666653
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.6e-07 Score=83.96 Aligned_cols=160 Identities=14% Similarity=0.043 Sum_probs=99.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC-----------CCEEEEcCcCCCCC---C------CCCCcchhhHHHHHHHHHHHHH-
Q 015570 16 EMLELVECDLEKRVQIEPALGN-----------ASVVICCIGASEKE---V------FDITGPYRIDFQATKNLVDAAT- 74 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g-----------vDvVI~~ag~~~~~---~------~d~~~~~~vnv~~~~~Ll~Aa~- 74 (404)
.++.++.+|+.|.+++..+++. .|+|||++|..... . .++...+++|+.+...+++++.
T Consensus 55 ~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~ 134 (256)
T TIGR01500 55 LRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLK 134 (256)
T ss_pred ceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3688899999999887766531 26899999964221 1 1223456788888776665553
Q ss_pred ---hC-C-CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--C
Q 015570 75 ---IA-K-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--E 140 (404)
Q Consensus 75 ---~a-g-VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~ 140 (404)
+. + ..+||++||.+..... ..+..|+.+|..++.+.+. .|+.+..|+||++..+..... .
T Consensus 135 ~l~~~~~~~~~iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~ 208 (256)
T TIGR01500 135 AFKDSPGLNRTVVNISSLCAIQPF------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREE 208 (256)
T ss_pred HHhhcCCCCCEEEEECCHHhCCCC------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHh
Confidence 32 2 2489999998653221 2246799999999887763 578999999999965321100 0
Q ss_pred --cccEE-EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEE
Q 015570 141 --THNIT-LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV 181 (404)
Q Consensus 141 --~~~i~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~ 181 (404)
..... ........+.+...+|+|++++.++.+..+.-|+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~~~~~~~G~~~ 252 (256)
T TIGR01500 209 SVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLEKDKFKSGAHV 252 (256)
T ss_pred cCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCcCCccee
Confidence 00000 000011123467999999999999975543333333
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.8e-06 Score=79.94 Aligned_cols=166 Identities=12% Similarity=0.077 Sum_probs=101.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC-----CCCCC---cchhhHHHHH----HHHHHHHH-h
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE-----VFDIT---GPYRIDFQAT----KNLVDAAT-I 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~-----~~d~~---~~~~vnv~~~----~~Ll~Aa~-~ 75 (404)
.++.++.+|+.|.+++.+++ .++|+|||++|..... ..+.. ..+.+|+.+. ..++..+. +
T Consensus 48 ~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 127 (259)
T PRK08340 48 GEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK 127 (259)
T ss_pred CCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc
Confidence 36889999999998887665 3789999999964211 11111 1223444443 33444443 3
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----Cccc
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----ETHN 143 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-----~~~~ 143 (404)
.+..+||++||..+.... ..+..|+.+|..++.+.+. .|+.+..|.||++-.+..... ....
T Consensus 128 ~~~g~iv~isS~~~~~~~------~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~ 201 (259)
T PRK08340 128 KMKGVLVYLSSVSVKEPM------PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERG 201 (259)
T ss_pred CCCCEEEEEeCcccCCCC------CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccC
Confidence 344689999998664321 2245799999998887763 578899999999865432100 0000
Q ss_pred EE-------EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 144 IT-------LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 144 i~-------~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.. ........+.+...+|||++++.++.+.. +..++++.+.++.
T Consensus 202 ~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 202 VSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred CchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence 00 00011122346789999999999998653 3345666665553
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.6e-06 Score=80.55 Aligned_cols=163 Identities=15% Similarity=0.135 Sum_probs=104.1
Q ss_pred eEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC-----------CCCCCcchhhHHHHHHHHHHHHHhC--C
Q 015570 18 LELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIA--K 77 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~-----------~~d~~~~~~vnv~~~~~Ll~Aa~~a--g 77 (404)
..++.+|+.|.+++.+++ ..+|++||++|..... ..++...+++|+.+...+++++... +
T Consensus 58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~ 137 (260)
T PRK06997 58 DLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD 137 (260)
T ss_pred cceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 347889999998887665 4689999999975321 1123344678888887777766542 2
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i-~~~~ 148 (404)
-.++|++||.+..... ..+..|..+|..++.+.+. .|+.+..|.||++..+..... ..... ....
T Consensus 138 ~g~Ii~iss~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~ 211 (260)
T PRK06997 138 DASLLTLSYLGAERVV------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVE 211 (260)
T ss_pred CceEEEEeccccccCC------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHH
Confidence 2589999987653221 1234699999999887763 589999999999865321100 00000 0000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.....+.+...+|||++++.++... .+..++++.+.++
T Consensus 212 ~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 250 (260)
T PRK06997 212 SNAPLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG 250 (260)
T ss_pred hcCcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence 1112234578999999999999764 3334566665544
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5e-06 Score=81.27 Aligned_cols=119 Identities=17% Similarity=0.043 Sum_probs=81.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC----CCCCCcchhhHHHH----HHHHHHHHHhCCCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE----VFDITGPYRIDFQA----TKNLVDAATIAKVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~----~~d~~~~~~vnv~~----~~~Ll~Aa~~agVkr 80 (404)
.+++++.+|+.|.+++.++++ ++|+|||+||..... ..++...+.+|+.+ +..|++.+++.+..+
T Consensus 67 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~ 146 (306)
T PRK06197 67 ADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSR 146 (306)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCE
Confidence 468899999999988876653 689999999975221 12344557888888 666777777766679
Q ss_pred EEEeccCcccCCC--Cc-----hhhcccchHHHHHHHHHHHHHHH-------CCCCEEEE--EcCccCCC
Q 015570 81 FIMVSSLGTNKFG--FP-----AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIV--RPGGMERP 134 (404)
Q Consensus 81 fI~vSS~gv~~~~--~~-----~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIl--Rpg~~~G~ 134 (404)
||++||.+..... .. .........|+.+|..++.+.+. .|+.++++ .||++..+
T Consensus 147 iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 147 VVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred EEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 9999998643211 00 01123456899999998877753 46665544 79998654
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.6e-06 Score=80.37 Aligned_cols=165 Identities=13% Similarity=0.109 Sum_probs=102.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC----C---CCC---CCcchhhHHHHHHHHHHHHHhC--
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK----E---VFD---ITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~----~---~~d---~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
.++.++.+|+.|.+++..++ ..+|++|||+|.... . ..+ +...+++|+.+...+++++...
T Consensus 59 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 138 (257)
T PRK08594 59 QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMT 138 (257)
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcc
Confidence 46788999999998877655 368999999986531 0 111 1223466777776666665432
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cc-ccEEEc
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET-HNITLS 147 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~-~~i~~~ 147 (404)
.-.++|++||....... ..+..|+.+|..++.+.+. .|+.+..|.||++..+..... .. ......
T Consensus 139 ~~g~Iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~ 212 (257)
T PRK08594 139 EGGSIVTLTYLGGERVV------QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEI 212 (257)
T ss_pred cCceEEEEcccCCccCC------CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHH
Confidence 12489999997653221 1235799999999888763 589999999999865421100 00 000000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+.+...+|+|+++++++.... +..++++.+.++
T Consensus 213 ~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 213 EERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred hhcCCccccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence 011122346788999999999997643 334566655444
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.2e-06 Score=81.08 Aligned_cols=149 Identities=15% Similarity=0.049 Sum_probs=100.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC---CCCC---CcchhhHHHHHHHH----HHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE---VFDI---TGPYRIDFQATKNL----VDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~---~~d~---~~~~~vnv~~~~~L----l~Aa~~agV 78 (404)
-.++++.+||.+.+++..... .+|++||+||..... ..++ ...+++|+.+...| +.-+.+.|-
T Consensus 56 v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~ 135 (265)
T COG0300 56 VEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA 135 (265)
T ss_pred ceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 467899999999988877653 699999999987433 2222 34467787666554 444556677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHH-------HHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~-------l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.++|.++|....... .....|+.+|..+-.+ |+..|+.++.|.||.+.-.+.. ..........
T Consensus 136 G~IiNI~S~ag~~p~------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~~~~~~~~--- 205 (265)
T COG0300 136 GHIINIGSAAGLIPT------PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKGSDVYLLS--- 205 (265)
T ss_pred ceEEEEechhhcCCC------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-cccccccccc---
Confidence 799999999876543 2245789999766333 3347899999999998754332 1111111111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
....+++.+|||+.++..++..+
T Consensus 206 ~~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 206 PGELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred chhhccCHHHHHHHHHHHHhcCC
Confidence 11236899999999999998655
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.7e-06 Score=82.22 Aligned_cols=162 Identities=14% Similarity=0.076 Sum_probs=103.2
Q ss_pred EEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-----C-----CCCCCcchhhHHHHHHHHHHHHHhC--CCC
Q 015570 19 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-----E-----VFDITGPYRIDFQATKNLVDAATIA--KVN 79 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-----~-----~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVk 79 (404)
.++.+|++|.+++.+++ ..+|++||++|.... . ..++...+++|+.+...+++++... .-.
T Consensus 58 ~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g 137 (274)
T PRK08415 58 YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA 137 (274)
T ss_pred eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Confidence 57899999998877654 468999999997421 0 1123345678888887777766532 124
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccE-EEccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i-~~~~~~ 150 (404)
++|++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+..... ..... ......
T Consensus 138 ~Iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 211 (274)
T PRK08415 138 SVLTLSYLGGVKYV------PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEIN 211 (274)
T ss_pred cEEEEecCCCccCC------CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhh
Confidence 89999987643221 1235799999998877763 589999999999865321100 00000 000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
...+.+...+|||++++.++.+. .+..++++.+.++
T Consensus 212 ~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG 248 (274)
T PRK08415 212 APLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG 248 (274)
T ss_pred CchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCc
Confidence 12234678899999999999764 3334666666555
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.4e-06 Score=78.96 Aligned_cols=165 Identities=13% Similarity=-0.011 Sum_probs=104.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC--C--CCC-------CCcchhhHHHHHHHHHHHHHhC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK--E--VFD-------ITGPYRIDFQATKNLVDAATIA- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~--~--~~d-------~~~~~~vnv~~~~~Ll~Aa~~a- 76 (404)
.++.++.+|+.|.+++..+++ .+|++||++|.... . ..+ +...+++|+.+...+++++...
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 131 (263)
T PRK06200 52 DHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPAL 131 (263)
T ss_pred CcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHH
Confidence 357899999999988776653 68999999997531 1 111 2334567888877777766532
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccC----c---
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE----T--- 141 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~----~--- 141 (404)
.-.++|++||....... .....|+.+|..++.+++. .++.+..|.||++..+...... .
T Consensus 132 ~~~~g~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~ 205 (263)
T PRK06200 132 KASGGSMIFTLSNSSFYPG------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSI 205 (263)
T ss_pred HhcCCEEEEECChhhcCCC------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCccc
Confidence 12479999987654322 1124699999999888863 3588999999998654211000 0
Q ss_pred ccEE----EccCCccccCcccHHHHHHHHHHHHhCC-C-CCCCcEEEEEcC
Q 015570 142 HNIT----LSQEDTLFGGQVSNLQVAELLACMAKNR-S-LSYCKVVEVIAE 186 (404)
Q Consensus 142 ~~i~----~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~-~~~~~i~nI~~~ 186 (404)
.... ........+.+...+|||++++.++.+. . +..++++.+.++
T Consensus 206 ~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 206 SDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred ccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 0000 0001112234678999999999998755 2 334667766555
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.1e-06 Score=84.66 Aligned_cols=118 Identities=9% Similarity=0.082 Sum_probs=81.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC----C---CCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE----V---FDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~----~---~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
.+++++.+|+.|.+++..+++ ++|+|||+||..... . .++...+.+|+.+..+|++++.. .+
T Consensus 55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 134 (322)
T PRK07453 55 DSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSP 134 (322)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC
Confidence 468899999999998887664 489999999964211 1 12344578999988888777653 32
Q ss_pred --CCEEEEeccCcccCC---CC-----c---------------------hhhcccchHHHHHHHHHHHHHH----H----
Q 015570 78 --VNHFIMVSSLGTNKF---GF-----P---------------------AAILNLFWGVLLWKRKAEEALI----A---- 118 (404)
Q Consensus 78 --VkrfI~vSS~gv~~~---~~-----~---------------------~~~~~~~~~y~~sK~~~E~~l~----~---- 118 (404)
..|||++||...+.. .. . .....++..|+.+|...+.+.+ +
T Consensus 135 ~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~ 214 (322)
T PRK07453 135 APDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHES 214 (322)
T ss_pred CCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhccc
Confidence 359999999754210 00 0 0112345689999987765443 2
Q ss_pred CCCCEEEEEcCccCC
Q 015570 119 SGLPYTIVRPGGMER 133 (404)
Q Consensus 119 ~gl~~tIlRpg~~~G 133 (404)
.|+.++.||||++++
T Consensus 215 ~gi~v~~v~PG~v~~ 229 (322)
T PRK07453 215 TGITFSSLYPGCVAD 229 (322)
T ss_pred CCeEEEEecCCcccC
Confidence 379999999999975
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=7e-06 Score=77.36 Aligned_cols=145 Identities=14% Similarity=0.072 Sum_probs=94.9
Q ss_pred CCeEEEEcCCC--CHhhHHH-------HhCCCCEEEEcCcCCCCC----C---CCCCcchhhHHHHHHHHHHHH----Hh
Q 015570 16 EMLELVECDLE--KRVQIEP-------ALGNASVVICCIGASEKE----V---FDITGPYRIDFQATKNLVDAA----TI 75 (404)
Q Consensus 16 ~gveiV~gDl~--d~~~l~~-------aL~gvDvVI~~ag~~~~~----~---~d~~~~~~vnv~~~~~Ll~Aa----~~ 75 (404)
.+++++.+|++ +.+++.. .+..+|+|||++|..... . .++...+++|+.+..++++++ ++
T Consensus 62 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~ 141 (247)
T PRK08945 62 PQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLK 141 (247)
T ss_pred CCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh
Confidence 35778888886 4444333 344789999999864221 1 123344678888877777665 45
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEcc
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQ 148 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~ 148 (404)
.+..+||++||....... .....|+.+|..++.+++. .|+.+++++||++-.+.... .+ .
T Consensus 142 ~~~~~iv~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~----~~--~- 208 (247)
T PRK08945 142 SPAASLVFTSSSVGRQGR------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS----AF--P- 208 (247)
T ss_pred CCCCEEEEEccHhhcCCC------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh----hc--C-
Confidence 677899999997543221 1234699999999887763 47889999999885532110 00 0
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
......+...+|+++++.+++.+..
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (247)
T PRK08945 209 -GEDPQKLKTPEDIMPLYLYLMGDDS 233 (247)
T ss_pred -cccccCCCCHHHHHHHHHHHhCccc
Confidence 0111246788999999999886543
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=7.2e-06 Score=76.87 Aligned_cols=142 Identities=16% Similarity=0.112 Sum_probs=93.1
Q ss_pred CeEEEEcCCCC--HhhHHHH-------h-CCCCEEEEcCcCCCC----CC---CCCCcchhhHHHHHHHHHHHHH----h
Q 015570 17 MLELVECDLEK--RVQIEPA-------L-GNASVVICCIGASEK----EV---FDITGPYRIDFQATKNLVDAAT----I 75 (404)
Q Consensus 17 gveiV~gDl~d--~~~l~~a-------L-~gvDvVI~~ag~~~~----~~---~d~~~~~~vnv~~~~~Ll~Aa~----~ 75 (404)
.+.++.+|+.+ .+++.++ + .++|+||||+|.... .. .++...+++|+.+..++++++. +
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 136 (239)
T PRK08703 57 EPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQ 136 (239)
T ss_pred CcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 46678899875 2333332 3 468999999996421 11 1122346788888777777664 3
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH--------CCCCEEEEEcCccCCCCCCccCcccEEEc
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA--------SGLPYTIVRPGGMERPTDAYKETHNITLS 147 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~--------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~ 147 (404)
.+..+||++||...... ...+..|+.+|..++.+++. .++.+++|+||+|+++......
T Consensus 137 ~~~~~iv~~ss~~~~~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~------- 203 (239)
T PRK08703 137 SPDASVIFVGESHGETP------KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH------- 203 (239)
T ss_pred CCCCEEEEEeccccccC------CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-------
Confidence 45568999998654321 12335799999999988753 2588999999999876432100
Q ss_pred cCCccccCcccHHHHHHHHHHHHhC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKN 172 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~ 172 (404)
.+.....+...+|++..++.++..
T Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 204 -PGEAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred -CCCCccccCCHHHHHHHHHHHhCc
Confidence 111122457999999999999974
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.1e-06 Score=80.08 Aligned_cols=165 Identities=14% Similarity=0.105 Sum_probs=102.2
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC--------CC---CCCcchhhHHHHHHHHHHHHHh---
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE--------VF---DITGPYRIDFQATKNLVDAATI--- 75 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~--------~~---d~~~~~~vnv~~~~~Ll~Aa~~--- 75 (404)
....+.+|+.|.+++.+++ .++|++||++|..... .. ++...+.+|+.+...+++++..
T Consensus 57 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~ 136 (261)
T PRK08690 57 SELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMR 136 (261)
T ss_pred CceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhh
Confidence 3467899999998887665 3689999999976321 01 1122245667666666655432
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCc-ccE-EE
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TL 146 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~ 146 (404)
.+-.++|++||.+..... ..+..|+.+|..++.+.+ ..|+.+..|.||++..+....... ... ..
T Consensus 137 ~~~g~Iv~iss~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~ 210 (261)
T PRK08690 137 GRNSAIVALSYLGAVRAI------PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGH 210 (261)
T ss_pred hcCcEEEEEcccccccCC------CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHH
Confidence 122589999987654321 123569999999887765 268999999999996542110000 000 00
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.......+.+...+|||++++.++.+.. +..++++.+.++.
T Consensus 211 ~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 211 VAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred HhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 0111223346789999999999998643 3346666665553
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=5e-06 Score=79.28 Aligned_cols=164 Identities=12% Similarity=0.096 Sum_probs=104.0
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC----------CCCCCCcchhhHHHHHHHHHHHHHhC--C
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--K 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~----------~~~d~~~~~~vnv~~~~~Ll~Aa~~a--g 77 (404)
.+.++.+|+.|.+++.+++ ..+|++|||+|.... ...++...+++|+.+...+++++... .
T Consensus 61 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~ 140 (258)
T PRK07533 61 APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN 140 (258)
T ss_pred cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc
Confidence 3467899999998877654 468999999987431 01123445678888888887766432 1
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~~ 148 (404)
-.++|++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+....... ... ....
T Consensus 141 ~g~Ii~iss~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 214 (258)
T PRK07533 141 GGSLLTMSYYGAEKVV------ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAA 214 (258)
T ss_pred CCEEEEEeccccccCC------ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHH
Confidence 2479999987653221 2245799999998877753 58999999999986532110000 000 0000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.....+.+...+|||+++++++.+. .+..++++.+.++
T Consensus 215 ~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 215 ERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred hcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence 1112234678899999999999753 3334666655544
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.9e-05 Score=72.50 Aligned_cols=160 Identities=13% Similarity=0.090 Sum_probs=101.1
Q ss_pred CCeEEEEcCCCCHhhHHHH---hCCCCEEEEcCcCCCCCCC---------C---CCcchhhHHHHHHHHHHHHH----hC
Q 015570 16 EMLELVECDLEKRVQIEPA---LGNASVVICCIGASEKEVF---------D---ITGPYRIDFQATKNLVDAAT----IA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a---L~gvDvVI~~ag~~~~~~~---------d---~~~~~~vnv~~~~~Ll~Aa~----~a 76 (404)
.++.++++|+.|.+++.++ +.++|+|||++|....... + +...+.+|+.+...+++++. +.
T Consensus 43 ~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 122 (235)
T PRK09009 43 DNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS 122 (235)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Confidence 5788999999998876654 5589999999998642111 1 11234667666666655554 34
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCcccEEEc
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLS 147 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~ 147 (404)
+..+++++|+........ ....+..|+.+|..++.+++. .++.+..|.||++....... +.
T Consensus 123 ~~~~i~~iss~~~~~~~~---~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-----~~-- 192 (235)
T PRK09009 123 ESAKFAVISAKVGSISDN---RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-----FQ-- 192 (235)
T ss_pred CCceEEEEeecccccccC---CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-----hh--
Confidence 456888888743211110 112345799999999887763 36778899999986543211 00
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
.....+.+++.+|+|+.+..++...... .+..+.+.++
T Consensus 193 -~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~ 231 (235)
T PRK09009 193 -QNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGE 231 (235)
T ss_pred -hccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence 0111234679999999999999876422 3445544333
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.31 E-value=5e-06 Score=79.23 Aligned_cols=165 Identities=15% Similarity=0.022 Sum_probs=105.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC--C--C-------CCCCcchhhHHHHHHHHHHHHHhC-
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK--E--V-------FDITGPYRIDFQATKNLVDAATIA- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~--~--~-------~d~~~~~~vnv~~~~~Ll~Aa~~a- 76 (404)
.++.++.+|+.|.+++..++ .++|++||++|.... . . .++...+++|+.+..++++++...
T Consensus 51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 130 (262)
T TIGR03325 51 DAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPAL 130 (262)
T ss_pred CceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHH
Confidence 35888999999988776655 368999999986421 0 0 124456788888888888877542
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCcc----Ccc--
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYK----ETH-- 142 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~----~~~-- 142 (404)
.-.++|++||....... .....|+.+|..++.+.+. ..+.+..|+||++..+..... ...
T Consensus 131 ~~~~g~iv~~sS~~~~~~~------~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~ 204 (262)
T TIGR03325 131 VASRGSVIFTISNAGFYPN------GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSI 204 (262)
T ss_pred hhcCCCEEEEeccceecCC------CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccc
Confidence 11468888876543221 1234699999999988863 248899999999875432110 000
Q ss_pred -cEEEc---cCCccccCcccHHHHHHHHHHHHhCCC--CCCCcEEEEEcC
Q 015570 143 -NITLS---QEDTLFGGQVSNLQVAELLACMAKNRS--LSYCKVVEVIAE 186 (404)
Q Consensus 143 -~i~~~---~~~~~~~~~Is~~DVA~ai~~~l~~~~--~~~~~i~nI~~~ 186 (404)
.+... ......+.+...+|||++++.++.+.. ...++++.+.++
T Consensus 205 ~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 205 STVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred cccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence 00000 011122346788999999999887532 234667766555
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.2e-06 Score=79.35 Aligned_cols=162 Identities=10% Similarity=0.074 Sum_probs=102.1
Q ss_pred EEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC----------CCCCCCcchhhHHHHHHHHHHHHHhC--CCC
Q 015570 19 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVN 79 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~----------~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVk 79 (404)
.++.+|+.|.+++.+++ ..+|++||++|.... ...++...+++|+.+...+++++... .-.
T Consensus 61 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G 140 (260)
T PRK06603 61 FVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGG 140 (260)
T ss_pred eEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence 46789999998877665 368999999986421 01123344678888888877765431 124
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-cC-cccEEEccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KE-THNITLSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~~-~~~i~~~~~~ 150 (404)
++|++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+.... .. ..........
T Consensus 141 ~Iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 214 (260)
T PRK06603 141 SIVTLTYYGAEKVI------PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAAT 214 (260)
T ss_pred eEEEEecCccccCC------CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhc
Confidence 89999987653221 1235699999998877752 68999999999986532110 00 0000000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...+.+...+|||+++++++.+.. +..++++.+-++
T Consensus 215 ~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 215 APLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred CCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence 122345789999999999997643 234566665554
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.5e-06 Score=79.52 Aligned_cols=165 Identities=15% Similarity=0.101 Sum_probs=103.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC-----------CCCCcchhhHHHHHHHHHHHHHhC-
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV-----------FDITGPYRIDFQATKNLVDAATIA- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~-----------~d~~~~~~vnv~~~~~Ll~Aa~~a- 76 (404)
.++.++.+|+.|.+++..++ ..+|++||++|...... .++...+++|+.+...+.+++...
T Consensus 56 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 135 (262)
T PRK07984 56 GSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 135 (262)
T ss_pred CCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 34678899999998888665 35899999999643211 112233466777777776665431
Q ss_pred -CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC-ccCcccE-EE
Q 015570 77 -KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETHNI-TL 146 (404)
Q Consensus 77 -gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~-~~~~~~i-~~ 146 (404)
.-.++|++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+... ....... ..
T Consensus 136 ~~~g~Iv~iss~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~ 209 (262)
T PRK07984 136 NPGSALLTLSYLGAERAI------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAH 209 (262)
T ss_pred cCCcEEEEEecCCCCCCC------CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHH
Confidence 12479999987653221 1235799999999888863 5899999999998643111 0000000 00
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.........+...+|||+++++++.+.. +..++++.+.++
T Consensus 210 ~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 210 CEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred HHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 0011122346788999999999997643 334566665554
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.7e-05 Score=73.62 Aligned_cols=152 Identities=11% Similarity=0.003 Sum_probs=101.2
Q ss_pred CeEEEEcCCCCHhhHHHHh---C--CCCEEEEcCcCCCCC--------CCCCCcchhhHHHHHHHHHHHHHh---CCCCE
Q 015570 17 MLELVECDLEKRVQIEPAL---G--NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATI---AKVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL---~--gvDvVI~~ag~~~~~--------~~d~~~~~~vnv~~~~~Ll~Aa~~---agVkr 80 (404)
+++++.+|+.|.+.+.+++ . .+|+|||++|..... ..++...+++|+.++.++++++.. .+..+
T Consensus 45 ~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ 124 (222)
T PRK06953 45 GAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGV 124 (222)
T ss_pred cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCe
Confidence 5678999999999888753 2 489999999975211 112344578899999999988864 22347
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccC
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG 155 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~ 155 (404)
||++||......... ....+.|..+|..++.+++. .++.++.|+||++..+... . ..
T Consensus 125 iv~isS~~~~~~~~~---~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~------------~---~~ 186 (222)
T PRK06953 125 LAVLSSRMGSIGDAT---GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG------------A---QA 186 (222)
T ss_pred EEEEcCccccccccc---CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC------------C---CC
Confidence 889888643211111 11123699999999988874 4678999999998654211 0 22
Q ss_pred cccHHHHHHHHHHHHhCCCCC-CCcEEEEEcC
Q 015570 156 QVSNLQVAELLACMAKNRSLS-YCKVVEVIAE 186 (404)
Q Consensus 156 ~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~ 186 (404)
.+..++.++.+..++...... .+..|.+.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T PRK06953 187 ALDPAQSVAGMRRVIAQATRRDNGRFFQYDGV 218 (222)
T ss_pred CCCHHHHHHHHHHHHHhcCcccCceEEeeCCc
Confidence 468899999998887654322 3445544433
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-05 Score=75.41 Aligned_cols=148 Identities=12% Similarity=0.040 Sum_probs=101.1
Q ss_pred CeEEEEcCCCCHhhHHHHhC----CCCEEEEcCcCCCC-----------CCCCCCcchhhHHHHHHHHHHHHHhC--CCC
Q 015570 17 MLELVECDLEKRVQIEPALG----NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~----gvDvVI~~ag~~~~-----------~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVk 79 (404)
+++++.+|+.|.+++.++++ ++|++||++|.... ...++...+++|+.+..++++++... .-.
T Consensus 45 ~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g 124 (223)
T PRK05884 45 DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGG 124 (223)
T ss_pred cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 46789999999999887764 68999999974210 01234455688998888888877542 225
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
++|++||... . ....|+.+|..++.+.+. .|+.+..|.||++..+... .. . .
T Consensus 125 ~Iv~isS~~~--~--------~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~-----~~--~--~-- 183 (223)
T PRK05884 125 SIISVVPENP--P--------AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD-----GL--S--R-- 183 (223)
T ss_pred eEEEEecCCC--C--------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh-----hc--c--C--
Confidence 8999998651 1 124699999998877752 5799999999998643210 00 0 0
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...-..+|+++++..++.... +..++++.+.++
T Consensus 184 -~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg 217 (223)
T PRK05884 184 -TPPPVAAEIARLALFLTTPAARHITGQTLHVSHG 217 (223)
T ss_pred -CCCCCHHHHHHHHHHHcCchhhccCCcEEEeCCC
Confidence 011278999999999987543 334666666554
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=9.7e-06 Score=79.50 Aligned_cols=161 Identities=12% Similarity=-0.005 Sum_probs=102.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC-------
Q 015570 16 EMLELVECDLEKRVQIEPAL------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA------- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a------- 76 (404)
.++.++.+|+.|.+.+.+++ .++|+|||++|..... ..++...+++|+.+..++++++...
T Consensus 62 ~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~ 141 (306)
T PRK07792 62 AKAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKA 141 (306)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc
Confidence 46789999999998877665 3689999999976432 1233445678988999988876421
Q ss_pred -C---CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE
Q 015570 77 -K---VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT 145 (404)
Q Consensus 77 -g---VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~ 145 (404)
+ ..+||++||....... .....|+.+|..++.+.+. .|+.+..|.|+......... .....
T Consensus 142 ~~~~~~g~iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~~t~~~~~~--~~~~~ 213 (306)
T PRK07792 142 AGGPVYGRIVNTSSEAGLVGP------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRARTAMTADV--FGDAP 213 (306)
T ss_pred cCCCCCcEEEEECCcccccCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCCCCchhhhh--ccccc
Confidence 1 2489999987543221 1234699999999887652 58999999998421110000 00000
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
... . .....+..+|||.+++.++.... ...+++|.+.++
T Consensus 214 ~~~-~-~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg 253 (306)
T PRK07792 214 DVE-A-GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGP 253 (306)
T ss_pred hhh-h-hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence 000 0 11234689999999999887543 234667776554
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.2e-05 Score=76.71 Aligned_cols=163 Identities=12% Similarity=0.045 Sum_probs=100.9
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC-------CCCCC---cchhhHHHHHHHHHHHHHhC--C
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE-------VFDIT---GPYRIDFQATKNLVDAATIA--K 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~-------~~d~~---~~~~vnv~~~~~Ll~Aa~~a--g 77 (404)
++.++.+|+.|.+++.+++ .++|++||++|..... ..+++ ..+++|+.+...+++++... .
T Consensus 58 ~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~ 137 (256)
T PRK07889 58 PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE 137 (256)
T ss_pred CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc
Confidence 5778999999998877654 4689999999975321 11222 23678888877777665431 1
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~~ 148 (404)
-.++|++|+.+... ...+..|+.+|..++.+.+. .|+.+..|.||++..+....... ... ....
T Consensus 138 ~g~Iv~is~~~~~~-------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~ 210 (256)
T PRK07889 138 GGSIVGLDFDATVA-------WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWD 210 (256)
T ss_pred CceEEEEeeccccc-------CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHH
Confidence 24788887643211 12235689999998877753 68999999999996542210000 000 0000
Q ss_pred CCcccc-CcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 149 EDTLFG-GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~-~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.....+ .+...+|||++++.++.+.. +..++++.+.++
T Consensus 211 ~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 211 ERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred hcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 011112 35789999999999997643 234566665544
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.7e-07 Score=84.26 Aligned_cols=164 Identities=19% Similarity=0.198 Sum_probs=105.8
Q ss_pred CeEEEEcCCCCHhhHHHH-------h-CCCCEEEEcCcCCCC----CC------CCCCcchhhHHHHHHHHHHHHHhC--
Q 015570 17 MLELVECDLEKRVQIEPA-------L-GNASVVICCIGASEK----EV------FDITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~a-------L-~gvDvVI~~ag~~~~----~~------~d~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
+.+++.+|+.|.+++..+ + .++|++||+++.... .. .++...+++|+.+...+++++...
T Consensus 45 ~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (241)
T PF13561_consen 45 GAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMK 124 (241)
T ss_dssp TSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355799999999887765 4 678999999988653 11 112233566666666666666432
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------H-CCCCEEEEEcCccCCCCCCcc-C-cccEEE
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYK-E-THNITL 146 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~-~gl~~tIlRpg~~~G~~~~~~-~-~~~i~~ 146 (404)
.-.++|++|+.+..... ..+..|+.+|..++.+.+ . .|+.+..|.||++..+..... . ......
T Consensus 125 ~~gsii~iss~~~~~~~------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~ 198 (241)
T PF13561_consen 125 KGGSIINISSIAAQRPM------PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEE 198 (241)
T ss_dssp HEEEEEEEEEGGGTSBS------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHH
T ss_pred hCCCcccccchhhcccC------ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhh
Confidence 11479999988664432 223579999999998886 2 589999999999975321100 0 000111
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.......+.+...+|||++++.++.+.. +.-|+++.|-++
T Consensus 199 ~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 199 LKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDGG 239 (241)
T ss_dssp HHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred hhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECCC
Confidence 1111223345799999999999998763 334666666554
|
... |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.8e-06 Score=77.43 Aligned_cols=184 Identities=13% Similarity=0.028 Sum_probs=129.2
Q ss_pred eEEEEcCCCCHhhHHHHh--CCCCEEEEcCcCC-CCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 18 LELVECDLEKRVQIEPAL--GNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL--~gvDvVI~~ag~~-~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
--+|..|+.|...+++.+ ..+|.+||..+.. ..++.+.....++|++|.-|+++.+++.+.+-| .-|++|+.+...
T Consensus 89 GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iF-VPSTIGAFGPtS 167 (366)
T KOG2774|consen 89 GPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVF-VPSTIGAFGPTS 167 (366)
T ss_pred CCchhhhhhccccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEe-ecccccccCCCC
Confidence 346778888888888876 4789999987653 233456677789999999999999999998544 478888865432
Q ss_pred chh------hcccchHHHHHHHHHHHHHH----HCCCCEEEEEcCccCCCCCCcc--------------CcccEEEccCC
Q 015570 95 PAA------ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK--------------ETHNITLSQED 150 (404)
Q Consensus 95 ~~~------~~~~~~~y~~sK~~~E~~l~----~~gl~~tIlRpg~~~G~~~~~~--------------~~~~i~~~~~~ 150 (404)
+.. ...+...|+.+|..+|-+-. +-|+++-.+|...++....-.. ..++.......
T Consensus 168 PRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrp 247 (366)
T KOG2774|consen 168 PRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRP 247 (366)
T ss_pred CCCCCCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCC
Confidence 221 34556678888877765443 5799999999988764211100 11222222222
Q ss_pred ccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
+....+++..|+-++++.++..+... ..++||+.+=. ++-+|+++.+.+.+.
T Consensus 248 dtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~~s----ftpee~~~~~~~~~p 300 (366)
T KOG2774|consen 248 DTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTGFS----FTPEEIADAIRRVMP 300 (366)
T ss_pred CccCceeehHHHHHHHHHHHhCCHHHhhhheeeeceec----cCHHHHHHHHHhhCC
Confidence 33345789999999998888766433 46799998875 888999999988765
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.2e-05 Score=84.27 Aligned_cols=162 Identities=13% Similarity=0.054 Sum_probs=102.5
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC--------CCCCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~--------~~~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
++..+.+|+.|.+++.+++ .++|+|||++|.... ...++...+++|+.+...+++++.. .+
T Consensus 52 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (520)
T PRK06484 52 DHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG 131 (520)
T ss_pred ceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 5678999999998877665 368999999987321 1122345578888888887776654 23
Q ss_pred CC-EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEE--
Q 015570 78 VN-HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITL-- 146 (404)
Q Consensus 78 Vk-rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~-- 146 (404)
.. +||++||....... .....|+.+|..++.+.+. .++.++.|+||++..+..... .......
T Consensus 132 ~g~~iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~ 205 (520)
T PRK06484 132 HGAAIVNVASGAGLVAL------PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSA 205 (520)
T ss_pred CCCeEEEECCcccCCCC------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHH
Confidence 33 89999987653321 1235799999999887752 579999999998865432110 0000000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEE
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVI 184 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~ 184 (404)
.........+...+|||++++.++.+.. +..++++.+.
T Consensus 206 ~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~ 244 (520)
T PRK06484 206 VRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVD 244 (520)
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEec
Confidence 0001111235688999999999887542 2234444443
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=8.9e-06 Score=78.97 Aligned_cols=163 Identities=10% Similarity=-0.017 Sum_probs=102.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hC--
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IA-- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~a-- 76 (404)
.++.++.+|+.|.+++.+++ ..+|++||++|..... ..++...+++|+.+...+++++. +.
T Consensus 64 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 143 (286)
T PRK07791 64 GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESK 143 (286)
T ss_pred CceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcc
Confidence 35778999999988876654 4789999999975321 12234456788888877776653 21
Q ss_pred -C---CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE
Q 015570 77 -K---VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT 145 (404)
Q Consensus 77 -g---VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~ 145 (404)
+ ..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|.|| +...... .....+.
T Consensus 144 ~~~~~~g~Iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~-~~~~~~~ 215 (286)
T PRK07791 144 AGRAVDARIINTSSGAGLQGS------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE-TVFAEMM 215 (286)
T ss_pred cCCCCCcEEEEeCchhhCcCC------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch-hhHHHHH
Confidence 1 2489999987553221 1235799999998877753 68999999998 4221110 0000000
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.............+|||+++++++... .+..++++.+.++.
T Consensus 216 -~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~ 257 (286)
T PRK07791 216 -AKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK 257 (286)
T ss_pred -hcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence 000000012468999999999998754 33356777766664
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.19 E-value=7.5e-06 Score=71.69 Aligned_cols=111 Identities=17% Similarity=0.147 Sum_probs=83.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhCCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI 82 (404)
.++.++.+|+.+.+.+..++. .+|+|||++|..... ..++...+++|+.+..+|++++.+.+.+++|
T Consensus 53 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii 132 (180)
T smart00822 53 AEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFV 132 (180)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEE
Confidence 357789999999887776643 469999999864321 1223445788999999999999888888999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---CCCCEEEEEcCccC
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGME 132 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---~gl~~tIlRpg~~~ 132 (404)
++||.+..... .....|+.+|..++.+++. .|++++.+.+|.+-
T Consensus 133 ~~ss~~~~~~~------~~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 133 LFSSVAGVLGN------PGQANYAAANAFLDALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred EEccHHHhcCC------CCchhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence 99997653221 1235789999998888753 68889999988764
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.8e-05 Score=71.46 Aligned_cols=141 Identities=13% Similarity=0.089 Sum_probs=91.4
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC---CCCC---cchhhHHHHHHHHH----HHHHhCC-C
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV---FDIT---GPYRIDFQATKNLV----DAATIAK-V 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~---~d~~---~~~~vnv~~~~~Ll----~Aa~~ag-V 78 (404)
++.++.+|+.|.+++.+++ .++|++||++|...... .+.. ....+|+.+..+++ ..+.+.+ -
T Consensus 50 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~ 129 (246)
T PRK05599 50 SVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAP 129 (246)
T ss_pred ceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC
Confidence 4789999999998877654 36899999999753211 1111 12345665655444 4444432 3
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... ..+..|+.+|..++.+.+. .|+.++.|.||++....... .. ..
T Consensus 130 g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~--~~------~~- 194 (246)
T PRK05599 130 AAIVAFSSIAGWRAR------RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTG--MK------PA- 194 (246)
T ss_pred CEEEEEeccccccCC------cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcC--CC------CC-
Confidence 589999997543221 1235799999988777652 57899999999996542110 00 00
Q ss_pred cccCcccHHHHHHHHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...+..+|+|++++.++.+..
T Consensus 195 --~~~~~pe~~a~~~~~~~~~~~ 215 (246)
T PRK05599 195 --PMSVYPRDVAAAVVSAITSSK 215 (246)
T ss_pred --CCCCCHHHHHHHHHHHHhcCC
Confidence 012578999999999998764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.3e-05 Score=73.49 Aligned_cols=133 Identities=15% Similarity=0.040 Sum_probs=89.5
Q ss_pred EEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC---CCCCCcchhhHHHHHHHHHHHHHhC-------CCCEEEEeccCc
Q 015570 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLG 88 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~---~~d~~~~~~vnv~~~~~Ll~Aa~~a-------gVkrfI~vSS~g 88 (404)
..+.+|++|.+++.+.+.++|++|||||..... ..++...+++|+.+..++++++... +-..+|..||.+
T Consensus 61 ~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a 140 (245)
T PRK12367 61 EWIKWECGKEESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEA 140 (245)
T ss_pred eEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccc
Confidence 578999999999999999999999999975322 2234556789999999988876532 112333344432
Q ss_pred ccCCCCchhhcccchHHHHHHHHHHHHH---H-------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCccc
Q 015570 89 TNKFGFPAAILNLFWGVLLWKRKAEEAL---I-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS 158 (404)
Q Consensus 89 v~~~~~~~~~~~~~~~y~~sK~~~E~~l---~-------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is 158 (404)
.... .....|+.+|..++.+. + ..++.++.+.+|.+..+.. . ...+.
T Consensus 141 ~~~~-------~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~--------------~--~~~~~ 197 (245)
T PRK12367 141 EIQP-------ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN--------------P--IGIMS 197 (245)
T ss_pred ccCC-------CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC--------------c--cCCCC
Confidence 2111 11346999999875322 1 2577888888888743210 0 12478
Q ss_pred HHHHHHHHHHHHhCCC
Q 015570 159 NLQVAELLACMAKNRS 174 (404)
Q Consensus 159 ~~DVA~ai~~~l~~~~ 174 (404)
.+|+|+.++.++.+..
T Consensus 198 ~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 198 ADFVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999999997655
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.3e-05 Score=76.87 Aligned_cols=159 Identities=13% Similarity=0.088 Sum_probs=95.2
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC--C-----CCCCcchhhHHHHHHHHHHH----HHhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE--V-----FDITGPYRIDFQATKNLVDA----ATIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~--~-----~d~~~~~~vnv~~~~~Ll~A----a~~ag 77 (404)
.++.++.+|+.|.+++.+++ .++|++||+||..... . .++...+++|+.+...++++ +++.+
T Consensus 47 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~ 126 (308)
T PLN00015 47 DSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD 126 (308)
T ss_pred CeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 46788999999998877665 3689999999975221 1 12234567888886666544 44444
Q ss_pred --CCEEEEeccCcccCC---C--Cc----h--------------------hhcccchHHHHHHHHHHHHHH----H----
Q 015570 78 --VNHFIMVSSLGTNKF---G--FP----A--------------------AILNLFWGVLLWKRKAEEALI----A---- 118 (404)
Q Consensus 78 --VkrfI~vSS~gv~~~---~--~~----~--------------------~~~~~~~~y~~sK~~~E~~l~----~---- 118 (404)
..++|++||...... . .+ . .....+..|+.+|...+.+.+ +
T Consensus 127 ~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~ 206 (308)
T PLN00015 127 YPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEE 206 (308)
T ss_pred CCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhccc
Confidence 469999999754311 0 00 0 011245679999998554432 2
Q ss_pred CCCCEEEEEcCccCC-CCCCc-cCcccEEEc-cCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 119 SGLPYTIVRPGGMER-PTDAY-KETHNITLS-QEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 119 ~gl~~tIlRpg~~~G-~~~~~-~~~~~i~~~-~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.|+.++.|+||++.. +.... ......... ......+.+...++.|+.++.++.+..
T Consensus 207 ~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~ 265 (308)
T PLN00015 207 TGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPS 265 (308)
T ss_pred CCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccccc
Confidence 479999999999953 21110 000000000 001111235788999999999887644
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00011 Score=68.35 Aligned_cols=147 Identities=11% Similarity=-0.052 Sum_probs=93.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-----CCCEEEEcCcCCCCCC--------CCCCcchhhHHHHHHHHHHHHHhC---CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-----NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAATIA---KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-----gvDvVI~~ag~~~~~~--------~d~~~~~~vnv~~~~~Ll~Aa~~a---gVk 79 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|...... .++...+.+|+.+..+|++++... +..
T Consensus 45 ~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 124 (225)
T PRK08177 45 PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQG 124 (225)
T ss_pred cccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCC
Confidence 467889999999988877665 5899999998753211 122334567777888887776532 335
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
++|++||........ ....+..|+.+|..++.+++. .++.++.|+||++-.+... .
T Consensus 125 ~iv~~ss~~g~~~~~---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~------------~-- 187 (225)
T PRK08177 125 VLAFMSSQLGSVELP---DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG------------D-- 187 (225)
T ss_pred EEEEEccCccccccC---CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC------------C--
Confidence 788888754321110 112344699999999988873 4688999999998543211 0
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcE
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKV 180 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i 180 (404)
...+.....++-++.++++.....++.
T Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (225)
T PRK08177 188 -NAPLDVETSVKGLVEQIEAASGKGGHR 214 (225)
T ss_pred -CCCCCHHHHHHHHHHHHHhCCccCCCc
Confidence 012455556666666666554333444
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=97.99 E-value=8.8e-05 Score=73.43 Aligned_cols=141 Identities=13% Similarity=0.034 Sum_probs=92.4
Q ss_pred CeEEEEcCCCC--Hhh---HHHHhCC--CCEEEEcCcCCCCC-----CC---CCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 17 MLELVECDLEK--RVQ---IEPALGN--ASVVICCIGASEKE-----VF---DITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 17 gveiV~gDl~d--~~~---l~~aL~g--vDvVI~~ag~~~~~-----~~---d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
++.++.+|+.+ .+. +.+.+.+ +|++||++|..... .. ++...+++|+.+..++++++. +.+
T Consensus 105 ~~~~~~~Dl~~~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~ 184 (320)
T PLN02780 105 QIKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK 184 (320)
T ss_pred EEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence 56788899975 222 3344444 56999999975311 11 123356788888888777653 456
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
..++|++||........ ......|+.+|..++.+.+. .|+.++.|+||++..+.... . ..
T Consensus 185 ~g~IV~iSS~a~~~~~~----~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~--------~-~~ 251 (320)
T PLN02780 185 KGAIINIGSGAAIVIPS----DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI--------R-RS 251 (320)
T ss_pred CcEEEEEechhhccCCC----CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc--------c-CC
Confidence 67999999976532110 01246799999999887753 58999999999996542210 0 01
Q ss_pred ccccCcccHHHHHHHHHHHHhC
Q 015570 151 TLFGGQVSNLQVAELLACMAKN 172 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~ 172 (404)
.. ..++.+++|+.++..+..
T Consensus 252 ~~--~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 252 SF--LVPSSDGYARAALRWVGY 271 (320)
T ss_pred CC--CCCCHHHHHHHHHHHhCC
Confidence 11 136889999999999954
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.93 E-value=7.9e-05 Score=72.13 Aligned_cols=148 Identities=16% Similarity=0.145 Sum_probs=92.8
Q ss_pred CeEEEEcCCCCHhhHHHH-------hCCCCEEEEcCcCCCCCCCC------CCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 17 MLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKEVFD------ITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~a-------L~gvDvVI~~ag~~~~~~~d------~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
++.++.+|+.|.+++.++ |.++|++||+||.......+ ....+++|+.|...+.+++ ++.+-.
T Consensus 64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~G 143 (282)
T KOG1205|consen 64 KVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDG 143 (282)
T ss_pred ccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCC
Confidence 799999999999988855 46999999999987432222 2234678888888776666 444546
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEE-EEEcCccCCCCCCccCcccEEEccCCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYT-IVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~t-IlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
|||.+||....... .....|..+|++++.+... .+..+. +|-||++--.... ..+.......
T Consensus 144 hIVvisSiaG~~~~------P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~----~~~~~~~~~~ 213 (282)
T KOG1205|consen 144 HIVVISSIAGKMPL------PFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTG----KELLGEEGKS 213 (282)
T ss_pred eEEEEeccccccCC------CcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccc----hhhccccccc
Confidence 99999998764432 1123699999999887752 222122 5889988532111 1111111101
Q ss_pred cccCcccHHHHHH--HHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAE--LLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~--ai~~~l~~~~ 174 (404)
..+.+...+|++. .++..+..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~i~~~~ 238 (282)
T KOG1205|consen 214 QQGPFLRTEDVADPEAVAYAISTPP 238 (282)
T ss_pred cccchhhhhhhhhHHHHHHHHhcCc
Confidence 2223455667755 6777766554
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00023 Score=72.76 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=89.9
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCC---CCCcchhhHHHHHHHHHHHHHh----CCC----CEEEEec
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVF---DITGPYRIDFQATKNLVDAATI----AKV----NHFIMVS 85 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~---d~~~~~~vnv~~~~~Ll~Aa~~----agV----krfI~vS 85 (404)
+++.+.+|+.|.+.+.+.+.++|++||++|....... ++...+++|+.+..++++++.. .+. ..+|.+|
T Consensus 225 ~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~S 304 (406)
T PRK07424 225 PVKTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTS 304 (406)
T ss_pred CeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEc
Confidence 4678999999999999999999999999987532222 2345578999999999888643 221 2345554
Q ss_pred cCcccCCCCchhhcccchHHHHHHHHHHHHH--HH--CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHH
Q 015570 86 SLGTNKFGFPAAILNLFWGVLLWKRKAEEAL--IA--SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ 161 (404)
Q Consensus 86 S~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l--~~--~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~D 161 (404)
+.+... .....|+.+|+.++.+. +. .++.+..+.+|.+.... . ....++.+|
T Consensus 305 sa~~~~--------~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~------~----------~~~~~spe~ 360 (406)
T PRK07424 305 EAEVNP--------AFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL------N----------PIGVMSADW 360 (406)
T ss_pred cccccC--------CCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC------C----------cCCCCCHHH
Confidence 422211 11246999999998753 22 45556666666653210 0 012479999
Q ss_pred HHHHHHHHHhCCC
Q 015570 162 VAELLACMAKNRS 174 (404)
Q Consensus 162 VA~ai~~~l~~~~ 174 (404)
+|+.++.++.++.
T Consensus 361 vA~~il~~i~~~~ 373 (406)
T PRK07424 361 VAKQILKLAKRDF 373 (406)
T ss_pred HHHHHHHHHHCCC
Confidence 9999999997765
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.89 E-value=9.1e-05 Score=67.34 Aligned_cols=163 Identities=20% Similarity=0.227 Sum_probs=105.6
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC------CCCCCCcchhhHHHHHHHHHHHHHhC----CC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~------~~~d~~~~~~vnv~~~~~Ll~Aa~~a----gV 78 (404)
.+.-.+.||+.+..+++..| ...+++|+|||.+.+ .+.+|+....+|+.+...+.+++.++ +.
T Consensus 62 ~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~ 141 (256)
T KOG1200|consen 62 GDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ 141 (256)
T ss_pred CccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC
Confidence 45567889999887766544 478999999999843 24567777888988888877776543 33
Q ss_pred C--EEEEeccCcc--cCCCCchhhcccchHHHHHHH-------HHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEc
Q 015570 79 N--HFIMVSSLGT--NKFGFPAAILNLFWGVLLWKR-------KAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLS 147 (404)
Q Consensus 79 k--rfI~vSS~gv--~~~~~~~~~~~~~~~y~~sK~-------~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~ 147 (404)
+ ++|.+||+-. ++++. ..|..+|. .+.+.+...++.+.+|.||++-.+....-....+..-
T Consensus 142 ~~~sIiNvsSIVGkiGN~GQ--------tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki 213 (256)
T KOG1200|consen 142 QGLSIINVSSIVGKIGNFGQ--------TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKI 213 (256)
T ss_pred CCceEEeehhhhcccccccc--------hhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHH
Confidence 3 8999999743 22322 23555552 3455666788999999999997654321111111111
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.....++.+--.++||.+++.+..+.. +.-+..+++.++
T Consensus 214 ~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 214 LGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLEVTGG 253 (256)
T ss_pred HccCCccccCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence 112223334578999999999885543 223778888876
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.84 E-value=9.8e-05 Score=72.74 Aligned_cols=159 Identities=11% Similarity=0.043 Sum_probs=94.5
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC----C---CCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE----V---FDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~----~---~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.+++++.+|+.|.+++..++ .++|++||++|..... . .++...+++|+.+...|++++ ++.+
T Consensus 53 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~ 132 (314)
T TIGR01289 53 DSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSP 132 (314)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC
Confidence 46788999999998877654 3699999999974211 1 122334678888876665544 4442
Q ss_pred --CCEEEEeccCcccCCCC------c---h------------------hhcccchHHHHHHHHHHHHHH----H----CC
Q 015570 78 --VNHFIMVSSLGTNKFGF------P---A------------------AILNLFWGVLLWKRKAEEALI----A----SG 120 (404)
Q Consensus 78 --VkrfI~vSS~gv~~~~~------~---~------------------~~~~~~~~y~~sK~~~E~~l~----~----~g 120 (404)
..|||++||...+.... . . .....+..|+.+|.....+.+ + .|
T Consensus 133 ~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g 212 (314)
T TIGR01289 133 NKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETG 212 (314)
T ss_pred CCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCC
Confidence 35999999986532100 0 0 011345679999998655443 1 37
Q ss_pred CCEEEEEcCccCC-CCCCc-cCcccEEEc-cCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 121 LPYTIVRPGGMER-PTDAY-KETHNITLS-QEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 121 l~~tIlRpg~~~G-~~~~~-~~~~~i~~~-~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
+.++.|+||++.+ +.... .......+. ......+++++.++.|+.++.++....
T Consensus 213 i~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~ 269 (314)
T TIGR01289 213 ITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPK 269 (314)
T ss_pred eEEEEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcc
Confidence 8899999999842 11110 000000000 000011235788999999998887654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00047 Score=67.77 Aligned_cols=155 Identities=14% Similarity=0.034 Sum_probs=92.7
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcC-cCCC-----CCC-----CCCCcchhhHHHHHHHHHHHHH----
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCI-GASE-----KEV-----FDITGPYRIDFQATKNLVDAAT---- 74 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~a-g~~~-----~~~-----~d~~~~~~vnv~~~~~Ll~Aa~---- 74 (404)
++.++.+|+.|.+++.+++ .++|++||++ |... ... .++...+++|+.+...+++++.
T Consensus 68 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~ 147 (305)
T PRK08303 68 RGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLI 147 (305)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhh
Confidence 4678999999998877664 3689999999 6421 111 1122234667766666655543
Q ss_pred hCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC-c-c-CcccE
Q 015570 75 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-Y-K-ETHNI 144 (404)
Q Consensus 75 ~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~-~-~-~~~~i 144 (404)
+.+-.+||++||......... ......|+.+|..+..+.+. .|+.+..|.||++..+... . . ....+
T Consensus 148 ~~~~g~IV~isS~~~~~~~~~---~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~ 224 (305)
T PRK08303 148 RRPGGLVVEITDGTAEYNATH---YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENW 224 (305)
T ss_pred hCCCcEEEEECCccccccCcC---CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccch
Confidence 333458999998643211000 11234699999998887752 5799999999998543210 0 0 00000
Q ss_pred -EEccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 145 -TLSQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 145 -~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.........+.+...+|||++++.++.+..
T Consensus 225 ~~~~~~~p~~~~~~~peevA~~v~fL~s~~~ 255 (305)
T PRK08303 225 RDALAKEPHFAISETPRYVGRAVAALAADPD 255 (305)
T ss_pred hhhhccccccccCCCHHHHHHHHHHHHcCcc
Confidence 000000111223478999999999997653
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00015 Score=71.31 Aligned_cols=119 Identities=12% Similarity=-0.013 Sum_probs=79.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHHHh---CCCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAATI---AKVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa~~---agVkr 80 (404)
.+++++.+|+.|.+++.++++ .+|++||+||...... .+++..+.+|+.+...|.+.+.. .+..|
T Consensus 65 ~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~r 144 (313)
T PRK05854 65 AKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRAR 144 (313)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCC
Confidence 368899999999988876653 5899999999753211 22334567888887766665542 23358
Q ss_pred EEEeccCcccCCC-Cc-----hhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCC
Q 015570 81 FIMVSSLGTNKFG-FP-----AAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERP 134 (404)
Q Consensus 81 fI~vSS~gv~~~~-~~-----~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~ 134 (404)
+|++||....... .. ......+..|+.+|...+.+.+. .|+.+..|.||++...
T Consensus 145 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 145 VTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred eEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 9999987542211 00 01123456899999988776642 3688999999998643
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0002 Score=66.47 Aligned_cols=167 Identities=11% Similarity=0.072 Sum_probs=101.5
Q ss_pred CCCEEEEcCcCCCC-CCCCCCcchhh-----HHHHHHHHHHHHHhCC--CCEEEEeccCcccCCCCc-----hhhcccch
Q 015570 37 NASVVICCIGASEK-EVFDITGPYRI-----DFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFP-----AAILNLFW 103 (404)
Q Consensus 37 gvDvVI~~ag~~~~-~~~d~~~~~~v-----nv~~~~~Ll~Aa~~ag--VkrfI~vSS~gv~~~~~~-----~~~~~~~~ 103 (404)
.|+.+++++|.+.- ...-|..-++. .+..++.|+++.+++- .+-+|.+|....|..... ...-..|.
T Consensus 73 sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd 152 (315)
T KOG3019|consen 73 SCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFD 152 (315)
T ss_pred ehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChH
Confidence 45556666654311 11223322332 3556788999998863 347888888877655321 11222233
Q ss_pred HHHHH--HHHHHHHHHHCCCCEEEEEcCccCCCCCCccC-c-ccEEEccCC-----ccccCcccHHHHHHHHHHHHhCCC
Q 015570 104 GVLLW--KRKAEEALIASGLPYTIVRPGGMERPTDAYKE-T-HNITLSQED-----TLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 104 ~y~~s--K~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~-~-~~i~~~~~~-----~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...+. +++.-.+.-......++||.|.+.|.+..... + ..+.++.++ ..+..|||++|++.+|..+|+++.
T Consensus 153 ~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~ 232 (315)
T KOG3019|consen 153 ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPS 232 (315)
T ss_pred HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCC
Confidence 33332 33333333345688999999999986543211 1 123333333 333469999999999999999987
Q ss_pred CCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 175 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 175 ~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
. .+++|-+..+. .+-.|+.+.+...++++
T Consensus 233 v--~GViNgvAP~~---~~n~Ef~q~lg~aL~Rp 261 (315)
T KOG3019|consen 233 V--KGVINGVAPNP---VRNGEFCQQLGSALSRP 261 (315)
T ss_pred C--CceecccCCCc---cchHHHHHHHHHHhCCC
Confidence 4 67888888875 66777777777777754
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00035 Score=68.77 Aligned_cols=146 Identities=10% Similarity=0.031 Sum_probs=87.9
Q ss_pred CCCCEEEEcCcCCC---C-----CCCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCcccCCCCchhhcccchHH
Q 015570 36 GNASVVICCIGASE---K-----EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFWGV 105 (404)
Q Consensus 36 ~gvDvVI~~ag~~~---~-----~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~gv~~~~~~~~~~~~~~~y 105 (404)
..+|++|||+|... . ...+|...+++|+.+...+++++... .-.++|++||....... + .....|
T Consensus 119 G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~-p----~~~~~Y 193 (303)
T PLN02730 119 GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERII-P----GYGGGM 193 (303)
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCCC-C----CCchhh
Confidence 46899999997421 1 11234445688888888877765442 11589999987653321 0 111369
Q ss_pred HHHHHHHHHHHHH--------CCCCEEEEEcCccCCCCCCccC-c-ccEEEccCCccccCcccHHHHHHHHHHHHhCCC-
Q 015570 106 LLWKRKAEEALIA--------SGLPYTIVRPGGMERPTDAYKE-T-HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS- 174 (404)
Q Consensus 106 ~~sK~~~E~~l~~--------~gl~~tIlRpg~~~G~~~~~~~-~-~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~- 174 (404)
+.+|..++.+.+. .|+.+..|.||++..+...... . ..............+...+|||.++++++....
T Consensus 194 ~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~ 273 (303)
T PLN02730 194 SSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLAS 273 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999887752 3789999999998654221000 0 000000011112335688999999999997543
Q ss_pred CCCCcEEEEEcC
Q 015570 175 LSYCKVVEVIAE 186 (404)
Q Consensus 175 ~~~~~i~nI~~~ 186 (404)
+.-++++.+-++
T Consensus 274 ~itG~~l~vdGG 285 (303)
T PLN02730 274 AITGATIYVDNG 285 (303)
T ss_pred CccCCEEEECCC
Confidence 334566665544
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00042 Score=60.87 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=74.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHHHhCCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI 82 (404)
.++.++++|+.+.+++.++++ ..|+||||+|....... ++...+++|+.+...+.+++...+-.+||
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv 131 (167)
T PF00106_consen 52 AKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIV 131 (167)
T ss_dssp SEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceE
Confidence 788999999999988776653 78999999998753222 22345678888999998888775556999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA 118 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~ 118 (404)
++||....... ..+..|..+|..++.+.+.
T Consensus 132 ~~sS~~~~~~~------~~~~~Y~askaal~~~~~~ 161 (167)
T PF00106_consen 132 NISSIAGVRGS------PGMSAYSASKAALRGLTQS 161 (167)
T ss_dssp EEEEGGGTSSS------TTBHHHHHHHHHHHHHHHH
T ss_pred EecchhhccCC------CCChhHHHHHHHHHHHHHH
Confidence 99998765432 2356899999999988763
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00096 Score=65.53 Aligned_cols=147 Identities=12% Similarity=0.032 Sum_probs=88.2
Q ss_pred hCCCCEEEEcCcCCC---CC-----CCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCcccCCCCchhhcccchH
Q 015570 35 LGNASVVICCIGASE---KE-----VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFWG 104 (404)
Q Consensus 35 L~gvDvVI~~ag~~~---~~-----~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~gv~~~~~~~~~~~~~~~ 104 (404)
+.++|++||++|... .. ..+|...+++|+.+..++++++... .-.++|++|+....... + .....
T Consensus 117 ~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~-p----~~~~~ 191 (299)
T PRK06300 117 FGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAV-P----GYGGG 191 (299)
T ss_pred cCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcC-C----CccHH
Confidence 357999999998532 11 1233444678888888887776542 12478888876543221 1 11126
Q ss_pred HHHHHHHHHHHHHH--------CCCCEEEEEcCccCCCCCCccC--cccEEEccCCccccCcccHHHHHHHHHHHHhCC-
Q 015570 105 VLLWKRKAEEALIA--------SGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQVAELLACMAKNR- 173 (404)
Q Consensus 105 y~~sK~~~E~~l~~--------~gl~~tIlRpg~~~G~~~~~~~--~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~- 173 (404)
|+.+|..++.+.+. .|+.+..|.||++..+...... ...................+|||+++++++...
T Consensus 192 Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~ 271 (299)
T PRK06300 192 MSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLA 271 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999877752 3899999999998654221000 000000000111233568899999999998754
Q ss_pred CCCCCcEEEEEcC
Q 015570 174 SLSYCKVVEVIAE 186 (404)
Q Consensus 174 ~~~~~~i~nI~~~ 186 (404)
.+..++++.+.++
T Consensus 272 ~~itG~~i~vdGG 284 (299)
T PRK06300 272 SAITGETLYVDHG 284 (299)
T ss_pred cCCCCCEEEECCC
Confidence 3344667766555
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0015 Score=63.25 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=95.1
Q ss_pred CeEEEEcCCCCHhhHHHH-------hCCCCEEEEcCcCCCCC-CC-----CCCcchhhHHHH----HHHHHHHHHhCCCC
Q 015570 17 MLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKE-VF-----DITGPYRIDFQA----TKNLVDAATIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~a-------L~gvDvVI~~ag~~~~~-~~-----d~~~~~~vnv~~----~~~Ll~Aa~~agVk 79 (404)
++....||++|.+++.+. +..+|++||+||..... .. +.+..+++|+.+ +++++-.+.+..-.
T Consensus 87 ~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~G 166 (300)
T KOG1201|consen 87 EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNG 166 (300)
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCc
Confidence 688999999999887654 34899999999986322 11 122345666555 45567777777667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHH-------HH---CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL-------IA---SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l-------~~---~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
|+|-++|....-.. .....|..+|..+.-.. +. .|++.|+|.|+.+- ++.+.....
T Consensus 167 HIV~IaS~aG~~g~------~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~--------Tgmf~~~~~ 232 (300)
T KOG1201|consen 167 HIVTIASVAGLFGP------AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN--------TGMFDGATP 232 (300)
T ss_pred eEEEehhhhcccCC------ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc--------ccccCCCCC
Confidence 99999887542111 12346888887664332 22 57889999999884 122222222
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
-..+.+.+..+.||+-|+..+...+
T Consensus 233 ~~~l~P~L~p~~va~~Iv~ai~~n~ 257 (300)
T KOG1201|consen 233 FPTLAPLLEPEYVAKRIVEAILTNQ 257 (300)
T ss_pred CccccCCCCHHHHHHHHHHHHHcCC
Confidence 2334467899999999999887655
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.001 Score=64.80 Aligned_cols=110 Identities=16% Similarity=0.057 Sum_probs=80.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC---------CCCEEEEcCcCC-CCCCCCC------CcchhhHHHHHHHHHHHH----H
Q 015570 15 VEMLELVECDLEKRVQIEPALG---------NASVVICCIGAS-EKEVFDI------TGPYRIDFQATKNLVDAA----T 74 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~---------gvDvVI~~ag~~-~~~~~d~------~~~~~vnv~~~~~Ll~Aa----~ 74 (404)
.+++..++.|+++.+++.++.+ |.-.|||+||.. .....+| ....++|+.|+..+..++ +
T Consensus 75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr 154 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR 154 (322)
T ss_pred CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 6899999999999999988753 779999999965 2222233 233577877776655544 4
Q ss_pred hCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCcc
Q 015570 75 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGM 131 (404)
Q Consensus 75 ~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~ 131 (404)
++. .|+|++||.+..... ...++|..+|..+|.+.. ..|+++.+|-||.|
T Consensus 155 ~ar-GRvVnvsS~~GR~~~------p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f 211 (322)
T KOG1610|consen 155 RAR-GRVVNVSSVLGRVAL------PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF 211 (322)
T ss_pred hcc-CeEEEecccccCccC------cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence 554 489999998753221 234789999999987653 37999999999955
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00094 Score=60.46 Aligned_cols=110 Identities=20% Similarity=0.183 Sum_probs=70.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC-C--CC---cchhhHHHHHHHHHHHHHhCCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF-D--IT---GPYRIDFQATKNLVDAATIAKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~-d--~~---~~~~vnv~~~~~Ll~Aa~~agVkrfI 82 (404)
..++++.+|++|.+++.+++. .++.|||++|....... + .. ..+..-+.+..+|.+++....+.+||
T Consensus 53 ~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i 132 (181)
T PF08659_consen 53 ARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFI 132 (181)
T ss_dssp -EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEE
T ss_pred CceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEE
Confidence 468899999999999998874 46899999998643321 1 11 12344577899999999988999999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCcc
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGM 131 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~ 131 (404)
++||+..--.. .....|......++.+.+ ..|++++.|.-+.+
T Consensus 133 ~~SSis~~~G~------~gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 133 LFSSISSLLGG------PGQSAYAAANAFLDALARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp EEEEHHHHTT-------TTBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred EECChhHhccC------cchHhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence 99998642111 012467777777776664 37889888887755
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0018 Score=60.32 Aligned_cols=152 Identities=9% Similarity=0.003 Sum_probs=94.8
Q ss_pred CCCCeEEEEcCCCCHhhHHHHh---------CCCCEEEEcCcCCCCCCCC-------CCcchhhHHHH----HHHHHHHH
Q 015570 14 PVEMLELVECDLEKRVQIEPAL---------GNASVVICCIGASEKEVFD-------ITGPYRIDFQA----TKNLVDAA 73 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL---------~gvDvVI~~ag~~~~~~~d-------~~~~~~vnv~~----~~~Ll~Aa 73 (404)
.+.++++++.|+++.+++.++. .|.+++|+++|........ +-..+++|..+ +++|+-.+
T Consensus 52 ~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLL 131 (249)
T KOG1611|consen 52 SDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLL 131 (249)
T ss_pred cCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence 4789999999999998877664 3789999999986322111 12234555444 34444444
Q ss_pred HhCCCC-----------EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCC
Q 015570 74 TIAKVN-----------HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT 135 (404)
Q Consensus 74 ~~agVk-----------rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~ 135 (404)
+++.-+ .+|++||...... ......+..|..+|.++....+. .++-++.++|||+--..
T Consensus 132 kkaas~~~gd~~s~~raaIinisS~~~s~~---~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM 208 (249)
T KOG1611|consen 132 KKAASKVSGDGLSVSRAAIINISSSAGSIG---GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM 208 (249)
T ss_pred HHHhhcccCCcccccceeEEEeeccccccC---CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC
Confidence 444333 6788888755421 11345567899999999888875 34557889999985321
Q ss_pred CCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEE
Q 015570 136 DAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEV 183 (404)
Q Consensus 136 ~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI 183 (404)
.. ....+.+++-+.-+++.+.+- ..+.|+.|+.
T Consensus 209 gg---------------~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~ 242 (249)
T KOG1611|consen 209 GG---------------KKAALTVEESTSKLLASINKLKNEHNGGFFNR 242 (249)
T ss_pred CC---------------CCcccchhhhHHHHHHHHHhcCcccCcceEcc
Confidence 11 123466666666666666542 2234555654
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00038 Score=64.83 Aligned_cols=165 Identities=15% Similarity=0.099 Sum_probs=105.8
Q ss_pred CCCCCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHH----HHHHHHhC-C--C
Q 015570 13 QPVEMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKN----LVDAATIA-K--V 78 (404)
Q Consensus 13 ~~~~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~----Ll~Aa~~a-g--V 78 (404)
.....+-++++|+++..+++.+|+ ..|++|+.||... +.||+....+|+.+..+ .+..+.+. | -
T Consensus 52 ~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~--dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~G 129 (261)
T KOG4169|consen 52 NPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD--DKDWERTINVNLTGVINGTQLALPYMDKKQGGKG 129 (261)
T ss_pred CCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc--chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCC
Confidence 445788999999999988887764 6899999999986 45778778888665554 56666542 1 2
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHH---------HHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA---------EEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~---------E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
.-+|.+||...-.. ...+.-|+.+|+.+ +.+++++|+.+..|+||+.--...+........+...
T Consensus 130 GiIvNmsSv~GL~P------~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~ 203 (261)
T KOG4169|consen 130 GIIVNMSSVAGLDP------MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYS 203 (261)
T ss_pred cEEEEeccccccCc------cccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCccccc
Confidence 35788888744221 12234577777533 5666779999999999987421111000001111111
Q ss_pred Cc-----cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 150 DT-----LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~-----~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
+. ......+..++|+-++.+++... .+.+|-+..+.
T Consensus 204 ~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~--NGaiw~v~~g~ 244 (261)
T KOG4169|consen 204 DSIKEALERAPKQSPACCAINIVNAIEYPK--NGAIWKVDSGS 244 (261)
T ss_pred HHHHHHHHHcccCCHHHHHHHHHHHHhhcc--CCcEEEEecCc
Confidence 10 01124577899999999999855 36677666654
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=64.12 Aligned_cols=150 Identities=16% Similarity=0.123 Sum_probs=94.4
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC-----CC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA-----KV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a-----gV 78 (404)
.+.+.-+|+.|-+++..+++ -.|.+|||||..-.+. .+....+++|+.++.|++.++..+ +.
T Consensus 85 ~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~ 164 (331)
T KOG1210|consen 85 DVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL 164 (331)
T ss_pred eeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC
Confidence 36688899988777776654 4699999999863221 122334688999999987766432 13
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHH-------HHHHHCCCCEEEEEcCccCCCCCCccCccc--EEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE-------EALIASGLPYTIVRPGGMERPTDAYKETHN--ITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E-------~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~--i~~~~~ 149 (404)
.|||++||..+.-. ...+..|..+|...- +.+...|+.++..-|+.+.-++.+..+... ......
T Consensus 165 g~I~~vsS~~a~~~------i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~ 238 (331)
T KOG1210|consen 165 GRIILVSSQLAMLG------IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIE 238 (331)
T ss_pred cEEEEehhhhhhcC------cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeec
Confidence 38888888644211 112345666665443 223346899999999999877654322211 111111
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
+ ..+.+..+++|.+++.-+...+
T Consensus 239 g--~ss~~~~e~~a~~~~~~~~rg~ 261 (331)
T KOG1210|consen 239 G--GSSVIKCEEMAKAIVKGMKRGN 261 (331)
T ss_pred C--CCCCcCHHHHHHHHHhHHhhcC
Confidence 1 2345889999999998887655
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0041 Score=60.21 Aligned_cols=168 Identities=17% Similarity=0.119 Sum_probs=107.5
Q ss_pred CCCeEEEEcCCCCHhhHHHH--------hCCCCEEEEcCcCCCCC-------CCCCCcchhhHHHH-HHHHHHHHHh---
Q 015570 15 VEMLELVECDLEKRVQIEPA--------LGNASVVICCIGASEKE-------VFDITGPYRIDFQA-TKNLVDAATI--- 75 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~a--------L~gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~-~~~Ll~Aa~~--- 75 (404)
..++..+.+|+.+.+++.++ +...|++|+++|..... ..+|+..+++|+.+ ..++..++..
T Consensus 59 ~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~ 138 (270)
T KOG0725|consen 59 GGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLK 138 (270)
T ss_pred CCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHH
Confidence 35688999999988765544 34699999999986422 12344456788884 5555555543
Q ss_pred -CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cc---cc
Q 015570 76 -AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET---HN 143 (404)
Q Consensus 76 -agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~---~~ 143 (404)
.+-..++++|+.+...... .....|..+|..++++.+. .|+.+..|-||.+..+..... .. ..
T Consensus 139 ~~~gg~I~~~ss~~~~~~~~-----~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~ 213 (270)
T KOG0725|consen 139 KSKGGSIVNISSVAGVGPGP-----GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEE 213 (270)
T ss_pred hcCCceEEEEeccccccCCC-----CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhH
Confidence 3456889888886544321 1114699999999999874 689999999998876531100 00 00
Q ss_pred E-EE--ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 144 I-TL--SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 144 i-~~--~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+ .. .......+.+...+|||..++.++.... +.-++.+.+.++-
T Consensus 214 ~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~ 261 (270)
T KOG0725|consen 214 FKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGF 261 (270)
T ss_pred HhhhhccccccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence 1 10 1111223456788999999999987754 3345666555553
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0015 Score=79.99 Aligned_cols=113 Identities=11% Similarity=0.069 Sum_probs=83.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFIM 83 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~ 83 (404)
.+++++.+|++|.+.+.+++. ++|+|||+||..... ..++...+++|+.|..+|++++.....++||+
T Consensus 2094 ~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~~~IV~ 2173 (2582)
T TIGR02813 2094 ASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAENIKLLAL 2173 (2582)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 357889999999988887664 589999999975321 12334457899999999999998877778999
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCC
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERP 134 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~ 134 (404)
+||....... .....|+.+|..++.+.+. .++.++.|.+|.+-+.
T Consensus 2174 ~SSvag~~G~------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2174 FSSAAGFYGN------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred EechhhcCCC------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 9997643211 1235799999887766542 3578889999987653
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00085 Score=67.03 Aligned_cols=95 Identities=18% Similarity=0.292 Sum_probs=72.2
Q ss_pred CCCCEEEEcCcCCCCCCCC-CCcchhhHHHHHHHHHHHHH----hCCCCEEEEeccCcccCCCCchhhcccchHHHHHHH
Q 015570 36 GNASVVICCIGASEKEVFD-ITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR 110 (404)
Q Consensus 36 ~gvDvVI~~ag~~~~~~~d-~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~ 110 (404)
.+++.+|++.|.+....+. ......++++....|+++.. +.+.+++|.++|.+.... ..+..|.+.|.
T Consensus 202 ~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~~-------s~~f~Yfk~K~ 274 (410)
T PF08732_consen 202 DDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNAI-------SSMFPYFKTKG 274 (410)
T ss_pred hhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcchh-------hhhhhhhHHHH
Confidence 4678999999998655433 33344677777777888777 778899999999876432 33568999999
Q ss_pred HHHHHHHHC---CC-CEEEEEcCccCCCCCC
Q 015570 111 KAEEALIAS---GL-PYTIVRPGGMERPTDA 137 (404)
Q Consensus 111 ~~E~~l~~~---gl-~~tIlRpg~~~G~~~~ 137 (404)
+.|+-|... .+ ..+|||||.+.|..+.
T Consensus 275 ~LE~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 275 ELENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred HHHHHHHhhcccccceEEEecCccccCCCCC
Confidence 999999863 24 4889999999997554
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0076 Score=56.49 Aligned_cols=135 Identities=7% Similarity=-0.071 Sum_probs=83.6
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------C-CCCEEEEcCcCCCCC-C---CCCCc---chhhHHHHHHHH----HHHHHhC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------G-NASVVICCIGASEKE-V---FDITG---PYRIDFQATKNL----VDAATIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~-gvDvVI~~ag~~~~~-~---~d~~~---~~~vnv~~~~~L----l~Aa~~a 76 (404)
.++..+.+|+.|.+++.+++ . ++|++||++|..... . .+++. .+.+|+.+...+ +..+++.
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~ 133 (227)
T PRK08862 54 DNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKR 133 (227)
T ss_pred CCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 35678889999998877554 3 689999999853211 1 11112 233444444444 4444443
Q ss_pred C-CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEcc
Q 015570 77 K-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQ 148 (404)
Q Consensus 77 g-VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~ 148 (404)
+ -.++|++||..... .+..|..+|..++.+.+. .|+.+..|.||++...... +
T Consensus 134 ~~~g~Iv~isS~~~~~---------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~---~------- 194 (227)
T PRK08862 134 NKKGVIVNVISHDDHQ---------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL---D------- 194 (227)
T ss_pred CCCceEEEEecCCCCC---------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc---C-------
Confidence 3 35899999864321 135799999998887753 5899999999999654110 0
Q ss_pred CCccccCccc-HHHHHHHHHHHHhCC
Q 015570 149 EDTLFGGQVS-NLQVAELLACMAKNR 173 (404)
Q Consensus 149 ~~~~~~~~Is-~~DVA~ai~~~l~~~ 173 (404)
.. .|.. .++++.++..++.+.
T Consensus 195 -~~---~~~~~~~~~~~~~~~l~~~~ 216 (227)
T PRK08862 195 -AV---HWAEIQDELIRNTEYIVANE 216 (227)
T ss_pred -HH---HHHHHHHHHHhheeEEEecc
Confidence 00 0111 178888888777533
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00097 Score=66.10 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=58.3
Q ss_pred EEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 20 LVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 20 iV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
+...+++|..++.++++|+|+||+++|.......++.+.+..|...++++++++++++++++|+++|..++
T Consensus 59 ~~v~~~td~~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd 129 (321)
T PTZ00325 59 AKVTGYADGELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN 129 (321)
T ss_pred ceEEEecCCCchHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 44556666666778999999999999986543345566788999999999999999999999999998763
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0033 Score=59.26 Aligned_cols=185 Identities=12% Similarity=0.005 Sum_probs=114.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC-CCCCCcc-hhhHHHHHHHHHHHHHhCCCC---EEEEeccCc
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE-VFDITGP-YRIDFQATKNLVDAATIAKVN---HFIMVSSLG 88 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~-~~d~~~~-~~vnv~~~~~Ll~Aa~~agVk---rfI~vSS~g 88 (404)
..+.+..||++|...|.+.+. ..+-|+|+++...-. -.|...+ -+++-.|+.+|++|.+..+.. ||-..|+..
T Consensus 83 ~~mkLHYgDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSE 162 (376)
T KOG1372|consen 83 ASMKLHYGDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSE 162 (376)
T ss_pred ceeEEeeccccchHHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHh
Confidence 567889999999999998886 678899999875221 1222222 357788999999999875421 677788877
Q ss_pred ccCCCCc--h---hhcccchHHHHHHHHHHHHHHHCCCCEE-EEEcCccCCCCC----CccCc-------ccEEE-----
Q 015570 89 TNKFGFP--A---AILNLFWGVLLWKRKAEEALIASGLPYT-IVRPGGMERPTD----AYKET-------HNITL----- 146 (404)
Q Consensus 89 v~~~~~~--~---~~~~~~~~y~~sK~~~E~~l~~~gl~~t-IlRpg~~~G~~~----~~~~~-------~~i~~----- 146 (404)
.++...+ . .+.-+..+|+.+|..+-.++....--|. +-+.|.++.... +...+ ..+.+
T Consensus 163 lyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~ 242 (376)
T KOG1372|consen 163 LYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEK 242 (376)
T ss_pred hcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceee
Confidence 7653321 1 1333456899888766444322111111 223444443111 11101 11111
Q ss_pred --ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 147 --SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 147 --~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+.-...++|-|..|..++|+.+|.++. ..-|.|..++. .+++|++......+|
T Consensus 243 ~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~---PdDfViATge~---hsVrEF~~~aF~~ig 298 (376)
T KOG1372|consen 243 IELGNLSALRDWGHAGDYVEAMWLMLQQDS---PDDFVIATGEQ---HSVREFCNLAFAEIG 298 (376)
T ss_pred EEecchhhhcccchhHHHHHHHHHHHhcCC---CCceEEecCCc---ccHHHHHHHHHHhhC
Confidence 1122334568899999999999998876 55677777764 888888877665555
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0082 Score=56.36 Aligned_cols=111 Identities=17% Similarity=0.154 Sum_probs=75.7
Q ss_pred CCeEEEEcCCCC-HhhHHHHh-------CCCCEEEEcCcCCCC--CC-----CCCCcchhhHHHHHHHHHHHHHhC-CCC
Q 015570 16 EMLELVECDLEK-RVQIEPAL-------GNASVVICCIGASEK--EV-----FDITGPYRIDFQATKNLVDAATIA-KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d-~~~l~~aL-------~gvDvVI~~ag~~~~--~~-----~d~~~~~~vnv~~~~~Ll~Aa~~a-gVk 79 (404)
..+..+.+|+++ .+.+..++ .++|++||++|.... .. .++...+.+|+.+...+.+++... .-+
T Consensus 57 ~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 136 (251)
T COG1028 57 GRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ 136 (251)
T ss_pred CcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC
Confidence 357778899998 76665443 369999999998532 11 233445678888777777744322 111
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGME 132 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~ 132 (404)
++|++||.... ..... +..|..+|..++.+.+ ..|+.++.|.||++.
T Consensus 137 ~Iv~isS~~~~-~~~~~-----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 137 RIVNISSVAGL-GGPPG-----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred eEEEECCchhc-CCCCC-----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 89999998765 32211 4679999998876654 257999999999654
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.045 Score=54.19 Aligned_cols=159 Identities=14% Similarity=0.011 Sum_probs=94.7
Q ss_pred CCCCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC-C---CCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 14 PVEMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV-F---DITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~-~---d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
....+.++++||.+..++.+.. ...|++|++||...... . ..+..+.+|+.|...|.+.+ +...-
T Consensus 84 ~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~ 163 (314)
T KOG1208|consen 84 ANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP 163 (314)
T ss_pred CCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC
Confidence 4567888999999998877653 37899999999874322 1 13445788888777765544 44433
Q ss_pred CEEEEeccCcccCCCCchh----h---cccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEE
Q 015570 79 NHFIMVSSLGTNKFGFPAA----I---LNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNIT 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~----~---~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~ 145 (404)
.|+|++||........-.+ . ......|+.+|........+ .|+....+.||.+....... ....++
T Consensus 164 ~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~ 242 (314)
T KOG1208|consen 164 SRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLR 242 (314)
T ss_pred CCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHH
Confidence 5999999976411101111 1 22233599999877555542 38999999999997642211 000000
Q ss_pred EccCCccccCc-ccHHHHHHHHHHHHhCCC
Q 015570 146 LSQEDTLFGGQ-VSNLQVAELLACMAKNRS 174 (404)
Q Consensus 146 ~~~~~~~~~~~-Is~~DVA~ai~~~l~~~~ 174 (404)
.. -....+.+ -+..+-|+.+..++.++.
T Consensus 243 ~l-~~~l~~~~~ks~~~ga~t~~~~a~~p~ 271 (314)
T KOG1208|consen 243 LL-AKKLSWPLTKSPEQGAATTCYAALSPE 271 (314)
T ss_pred HH-HHHHHHHhccCHHHHhhheehhccCcc
Confidence 00 00011112 256777777777776663
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.011 Score=58.79 Aligned_cols=69 Identities=22% Similarity=0.165 Sum_probs=56.7
Q ss_pred EcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 22 ECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 22 ~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
..++.+.+++..+++|+|+|||++|.......++.+....|...++++++++++++.+.+|+++|--++
T Consensus 71 i~~~~~~~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD 139 (323)
T PLN00106 71 VRGFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN 139 (323)
T ss_pred EEEEeCCCCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 334445556788999999999999987654456677788999999999999999999999999987664
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.034 Score=52.04 Aligned_cols=132 Identities=15% Similarity=0.108 Sum_probs=84.2
Q ss_pred CCCEEEEcCcCCCC---------CCCCCCcchhhHHHHHHHHHHHHHhC--C---CCEEEEeccCcccCCCCchhhcccc
Q 015570 37 NASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATIA--K---VNHFIMVSSLGTNKFGFPAAILNLF 102 (404)
Q Consensus 37 gvDvVI~~ag~~~~---------~~~d~~~~~~vnv~~~~~Ll~Aa~~a--g---VkrfI~vSS~gv~~~~~~~~~~~~~ 102 (404)
.-|.|||+||.... +..+|..++.+|+.....|...+... + .+.+|++||..+.+.. ..|
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~------~~w 155 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPF------SSW 155 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccc------cHH
Confidence 56999999997521 12235567888988888887766542 2 2578999998775542 446
Q ss_pred hHHHHHHHHHHHHHHH-----C-CCCEEEEEcCccCCCCCCccCccc-EE---Ecc--CCccccCcccHHHHHHHHHHHH
Q 015570 103 WGVLLWKRKAEEALIA-----S-GLPYTIVRPGGMERPTDAYKETHN-IT---LSQ--EDTLFGGQVSNLQVAELLACMA 170 (404)
Q Consensus 103 ~~y~~sK~~~E~~l~~-----~-gl~~tIlRpg~~~G~~~~~~~~~~-i~---~~~--~~~~~~~~Is~~DVA~ai~~~l 170 (404)
..|+.+|++.+-+.+. . ++....++||.+--.......... +. +.. .-...+..+...+.|+.+..++
T Consensus 156 a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~ 235 (253)
T KOG1204|consen 156 AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLL 235 (253)
T ss_pred HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHH
Confidence 7899999999988874 3 777888999998533221111110 00 000 0001123567788899999888
Q ss_pred hCCC
Q 015570 171 KNRS 174 (404)
Q Consensus 171 ~~~~ 174 (404)
+...
T Consensus 236 e~~~ 239 (253)
T KOG1204|consen 236 EKGD 239 (253)
T ss_pred HhcC
Confidence 8764
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.031 Score=51.84 Aligned_cols=111 Identities=14% Similarity=0.033 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----C
Q 015570 15 VEMLELVECDLEKRVQIEPALG--------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----A 76 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----a 76 (404)
..|+...+.|+.+.+++...+. ..|++|++||..... ..+.+..+++|+.|..++.++... +
T Consensus 51 ~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika 130 (289)
T KOG1209|consen 51 QFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA 130 (289)
T ss_pred hhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc
Confidence 3578999999999988876653 579999999976321 222344578888888888777653 3
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccC
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME 132 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~ 132 (404)
+ ..+|+++|+..+-... .-..|..+|.++..+.+. -|++++-+-+|.+-
T Consensus 131 K-GtIVnvgSl~~~vpfp------f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 131 K-GTIVNVGSLAGVVPFP------FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVA 186 (289)
T ss_pred c-ceEEEecceeEEeccc------hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEeccccee
Confidence 3 3799999987654321 125699999999888874 36777777777764
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.093 Score=53.14 Aligned_cols=55 Identities=25% Similarity=0.338 Sum_probs=41.1
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEec
Q 015570 14 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 85 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vS 85 (404)
...+++++++|+.|.+++.++++++|+||||++.. ....++++|.++|+ |+|-.|
T Consensus 44 ~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~----------------~~~~v~~~~i~~g~-~yvD~~ 98 (386)
T PF03435_consen 44 LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF----------------FGEPVARACIEAGV-HYVDTS 98 (386)
T ss_dssp TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG----------------GHHHHHHHHHHHT--EEEESS
T ss_pred cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc----------------hhHHHHHHHHHhCC-Ceeccc
Confidence 45799999999999999999999999999999864 14567777777776 566533
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.74 Score=43.39 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=87.6
Q ss_pred eEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCC--CCCcchhhHH-----HHHHHHHHHHHhC-----CC
Q 015570 18 LELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVF--DITGPYRIDF-----QATKNLVDAATIA-----KV 78 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~--d~~~~~~vnv-----~~~~~Ll~Aa~~a-----gV 78 (404)
.-++.||+++.+++..+|. +.|.+||++++..+... +..+.-+-++ -.+..|+..++++ +-
T Consensus 58 ~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~g 137 (259)
T COG0623 58 DLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNG 137 (259)
T ss_pred CeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCC
Confidence 4689999999988887764 78999999998764321 1111111111 1122233333332 11
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH----H---CCCCEEEEEcCccC-----CCCCCccCcccEEE
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A---SGLPYTIVRPGGME-----RPTDAYKETHNITL 146 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~----~---~gl~~tIlRpg~~~-----G~~~~~~~~~~i~~ 146 (404)
.-+|-++-.+..+.- .-++..+..|...|.-+| + .|+++..|-.|-+= |-.+. ...+..
T Consensus 138 gSiltLtYlgs~r~v------PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f---~~~l~~ 208 (259)
T COG0623 138 GSILTLTYLGSERVV------PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDF---RKMLKE 208 (259)
T ss_pred CcEEEEEeccceeec------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccH---HHHHHH
Confidence 256666665553321 223456778888886665 1 46777777666551 10000 000111
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~ 186 (404)
.......+..++.+||+...+.++.+-.. .-|++.++-++
T Consensus 209 ~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G 249 (259)
T COG0623 209 NEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSG 249 (259)
T ss_pred HHhhCCccCCCCHHHhhhhHHHHhcchhcccccceEEEcCC
Confidence 11112233458899999999999876432 23566665555
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.23 Score=49.13 Aligned_cols=61 Identities=23% Similarity=0.260 Sum_probs=48.8
Q ss_pred hhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 29 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 29 ~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
+++.+.++++|+||.|+|.......+..+....|....+++++++++.+.+++|.+.|-=+
T Consensus 61 ~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 61 EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV 121 (312)
T ss_pred CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence 4556778999999999998654333445667889999999999999999999998887533
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.51 Score=46.94 Aligned_cols=106 Identities=16% Similarity=0.080 Sum_probs=64.9
Q ss_pred HhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CC-EEEEeccCc------ccC--CCCchh
Q 015570 28 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSSLG------TNK--FGFPAA 97 (404)
Q Consensus 28 ~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-Vk-rfI~vSS~g------v~~--~~~~~~ 97 (404)
..++.++++++|+|||+||.......+....++.|+.-.+.+++.+++.. -. .+|.+|.-. +.. ...+..
T Consensus 69 ~~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~ 148 (325)
T cd01336 69 TTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKE 148 (325)
T ss_pred cCCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHH
Confidence 45677889999999999998765444446677899999999988888773 23 445555311 000 111111
Q ss_pred hcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCC
Q 015570 98 ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERP 134 (404)
Q Consensus 98 ~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~ 134 (404)
. -....+..+.+.-..+....+++..-|+-..++|.
T Consensus 149 ~-ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~Ge 184 (325)
T cd01336 149 N-FTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGN 184 (325)
T ss_pred H-EEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEc
Confidence 1 12233555555555555556777666666666665
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.23 Score=50.51 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=45.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEec
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 85 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vS 85 (404)
.+++.+++|..|.+.+.++|++.|+||+|+.... ...++++|.++|| ++|-+|
T Consensus 47 ~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~----------------~~~i~ka~i~~gv-~yvDts 99 (389)
T COG1748 47 GKVEALQVDAADVDALVALIKDFDLVINAAPPFV----------------DLTILKACIKTGV-DYVDTS 99 (389)
T ss_pred ccceeEEecccChHHHHHHHhcCCEEEEeCCchh----------------hHHHHHHHHHhCC-CEEEcc
Confidence 4899999999999999999999999999998642 3588999999998 455444
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.43 Score=43.15 Aligned_cols=109 Identities=10% Similarity=0.062 Sum_probs=73.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCC----EEEEe
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN----HFIMV 84 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVk----rfI~v 84 (404)
.+++++.+|+.|.+++.++++ +.|.+|+.+- ..+..++..+|++.||+ +||++
T Consensus 47 ~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh----------------~~~~~~~~~~~~~~gv~~~~~~~~h~ 110 (177)
T PRK08309 47 ESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIH----------------SSAKDALSVVCRELDGSSETYRLFHV 110 (177)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEecc----------------ccchhhHHHHHHHHccCCCCceEEEE
Confidence 468889999999988887764 4577776664 34689999999999999 88886
Q ss_pred ccCcccCCCCchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHH
Q 015570 85 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 164 (404)
Q Consensus 85 SS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ 164 (404)
=+..+... +...+.. ......|-=|.+|++... -...|.+.+.|++
T Consensus 111 ~gs~~~~~----------------~~~~~~~-~~~~~~~~~i~lgf~~~~-----------------~~~rwlt~~ei~~ 156 (177)
T PRK08309 111 LGSAASDP----------------RIPSEKI-GPARCSYRRVILGFVLED-----------------TYSRWLTHEEISD 156 (177)
T ss_pred eCCcCCch----------------hhhhhhh-hhcCCceEEEEEeEEEeC-----------------CccccCchHHHHH
Confidence 54433211 1111222 224456666667765321 1124678899999
Q ss_pred HHHHHHhCCC
Q 015570 165 LLACMAKNRS 174 (404)
Q Consensus 165 ai~~~l~~~~ 174 (404)
.+++++++..
T Consensus 157 gv~~~~~~~~ 166 (177)
T PRK08309 157 GVIKAIESDA 166 (177)
T ss_pred HHHHHHhcCC
Confidence 9999997655
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.69 Score=46.00 Aligned_cols=70 Identities=19% Similarity=0.138 Sum_probs=51.3
Q ss_pred CCeEEEEcCCCCH-----------hhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CC-EEE
Q 015570 16 EMLELVECDLEKR-----------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~-----------~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-Vk-rfI 82 (404)
+.++....||.|. .....+++++|+|||+||.......+-.+....|..-.+.++..+++.+ -. .+|
T Consensus 44 ~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iii 123 (323)
T cd00704 44 KALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVL 123 (323)
T ss_pred CccceeeeehhhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEE
Confidence 4566667777665 4566889999999999998755444555667889999999999998873 44 444
Q ss_pred Eec
Q 015570 83 MVS 85 (404)
Q Consensus 83 ~vS 85 (404)
.+|
T Consensus 124 vvs 126 (323)
T cd00704 124 VVG 126 (323)
T ss_pred EeC
Confidence 454
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.00 E-value=0.93 Score=42.10 Aligned_cols=113 Identities=14% Similarity=0.022 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCCC-CCc-------chhhHHHHHHHHHHHHHh----
Q 015570 15 VEMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVFD-ITG-------PYRIDFQATKNLVDAATI---- 75 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~d-~~~-------~~~vnv~~~~~Ll~Aa~~---- 75 (404)
.+.+..+.||+.|.++++..++ ..+++|+|||.....+.. .+. -..+|+.+..+|..++..
T Consensus 49 ~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~ 128 (245)
T COG3967 49 NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLR 128 (245)
T ss_pred CcchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 4778889999999887665442 789999999986432211 222 235677776666665543
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCC
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMER 133 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G 133 (404)
..--.+|.+||.-+.-. .....-|..+|..+.-+-. ..++++.-|-|..+--
T Consensus 129 q~~a~IInVSSGLafvP------m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t 187 (245)
T COG3967 129 QPEATIINVSSGLAFVP------MASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDT 187 (245)
T ss_pred CCCceEEEeccccccCc------ccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceec
Confidence 33236888888644211 1222357888877765442 3578888888887743
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=89.88 E-value=0.13 Score=46.21 Aligned_cols=165 Identities=13% Similarity=0.126 Sum_probs=94.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC------------CCCCCCcchhhHHHHHHHHHHHHHh-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAATI- 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~------------~~~d~~~~~~vnv~~~~~Ll~Aa~~- 75 (404)
.++-+...|++...++..+|. ..|+.|+|+|.... ...|.+...++|+.|+.|+++....
T Consensus 55 ~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~agl 134 (260)
T KOG1199|consen 55 GKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGL 134 (260)
T ss_pred CceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhh
Confidence 457788889999988888774 68999999997411 1112233346788888888775431
Q ss_pred -------CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHH-------HHHHHCCCCEEEEEcCccCCCCCCccCc
Q 015570 76 -------AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE-------EALIASGLPYTIVRPGGMERPTDAYKET 141 (404)
Q Consensus 76 -------agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E-------~~l~~~gl~~tIlRpg~~~G~~~~~~~~ 141 (404)
.+-+|-|.+.+.++-.+... .....|..+|..+- +-+...|+.++.|-||.|-.+.......
T Consensus 135 mg~nepdq~gqrgviintasvaafdgq----~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpe 210 (260)
T KOG1199|consen 135 MGENEPDQNGQRGVIINTASVAAFDGQ----TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPE 210 (260)
T ss_pred hcCCCCCCCCcceEEEeeceeeeecCc----cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhH
Confidence 23345555666655322110 11135666765442 2233468999999999886542211100
Q ss_pred cc-EEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEc
Q 015570 142 HN-ITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 185 (404)
Q Consensus 142 ~~-i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~ 185 (404)
.. -.+...-.+....-+....|.++-.+++|+- ..++++.+-+
T Consensus 211 kv~~fla~~ipfpsrlg~p~eyahlvqaiienp~-lngevir~dg 254 (260)
T KOG1199|consen 211 KVKSFLAQLIPFPSRLGHPHEYAHLVQAIIENPY-LNGEVIRFDG 254 (260)
T ss_pred HHHHHHHHhCCCchhcCChHHHHHHHHHHHhCcc-cCCeEEEecc
Confidence 00 0011101111123467788888888888876 3455665544
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=88.89 E-value=1 Score=44.77 Aligned_cols=69 Identities=17% Similarity=0.094 Sum_probs=51.4
Q ss_pred CeEEEEcCCCCHh-----------hHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CC-EEEE
Q 015570 17 MLELVECDLEKRV-----------QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIM 83 (404)
Q Consensus 17 gveiV~gDl~d~~-----------~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-Vk-rfI~ 83 (404)
.++.+..||.|.. .....++++|+||+++|.......+..+....|+.-.+.+++.+++.+ -+ .+|.
T Consensus 44 ~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiiv 123 (324)
T TIGR01758 44 VLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLV 123 (324)
T ss_pred ccceeEeehhcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 4667777777765 446789999999999998755434466777889999999999998873 43 4454
Q ss_pred ec
Q 015570 84 VS 85 (404)
Q Consensus 84 vS 85 (404)
+|
T Consensus 124 vs 125 (324)
T TIGR01758 124 VG 125 (324)
T ss_pred eC
Confidence 54
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=88.84 E-value=0.15 Score=46.07 Aligned_cols=162 Identities=9% Similarity=0.012 Sum_probs=94.4
Q ss_pred eEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCC------CCCCCCcchhhHHHHHHHHHHHHHh----CCCC-EEEE
Q 015570 18 LELVECDLEKRVQIEPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVN-HFIM 83 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~------~~~d~~~~~~vnv~~~~~Ll~Aa~~----agVk-rfI~ 83 (404)
++-+++|+.+-+.+.++|. -+|.+++.||.... ...+.+..|.+|+.+..++.+...+ .+++ -+|.
T Consensus 55 I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVN 134 (245)
T KOG1207|consen 55 IIPIVGDLSAWEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVN 134 (245)
T ss_pred eeeeEecccHHHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEE
Confidence 8889999999888888776 46999999987521 1223444567777776666665332 2332 5888
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHH----H---CCCCEEEEEcCccCCCC--CCccCcccEEEccCCcccc
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A---SGLPYTIVRPGGMERPT--DAYKETHNITLSQEDTLFG 154 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~----~---~gl~~tIlRpg~~~G~~--~~~~~~~~i~~~~~~~~~~ 154 (404)
+||....+.-. -...|..+|.+.+-+-+ + ..+.+..+.|..++... +.|..-.+..-..+.....
T Consensus 135 vSSqas~R~~~------nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~ 208 (245)
T KOG1207|consen 135 VSSQASIRPLD------NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLK 208 (245)
T ss_pred ecchhcccccC------CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchh
Confidence 99876644321 12357778877665443 2 34677788888876432 2222211111111222233
Q ss_pred CcccHHHHHHHHHHHHhCCC-CCCCcEEEEEc
Q 015570 155 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIA 185 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~ 185 (404)
.|--++.|..++..++.+.. +..|..+-+-+
T Consensus 209 rFaEV~eVVnA~lfLLSd~ssmttGstlpveG 240 (245)
T KOG1207|consen 209 RFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEG 240 (245)
T ss_pred hhhHHHHHHhhheeeeecCcCcccCceeeecC
Confidence 46677888888888776543 22344443333
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.23 E-value=0.7 Score=44.20 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCCHhhHHHH-------hCCCCEEEEcCcCCCCCCCCCC-------------------------------
Q 015570 15 VEMLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKEVFDIT------------------------------- 56 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~a-------L~gvDvVI~~ag~~~~~~~d~~------------------------------- 56 (404)
.-.+++|.+|+.|-.++.+| ++..|.|+.+||.+....-+|-
T Consensus 60 ~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~ 139 (341)
T KOG1478|consen 60 TIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADG 139 (341)
T ss_pred eeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccc
Confidence 34789999999998776655 4578999999998744333331
Q ss_pred --cchhhHHHHHHHHHHHHHhC----CCCEEEEeccCcccCCCCch-hh--cccchHHHHHHHHHHHHHHH-------CC
Q 015570 57 --GPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFGFPA-AI--LNLFWGVLLWKRKAEEALIA-------SG 120 (404)
Q Consensus 57 --~~~~vnv~~~~~Ll~Aa~~a----gVkrfI~vSS~gv~~~~~~~-~~--~~~~~~y~~sK~~~E~~l~~-------~g 120 (404)
..++.|+.|...|++-++.. .-.++|++||..+......- +. ...--+|..+|+..+-+-.. .|
T Consensus 140 lg~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g 219 (341)
T KOG1478|consen 140 LGEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLG 219 (341)
T ss_pred hhhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccc
Confidence 13567777877777766543 23489999999876544221 11 11123688888877644321 46
Q ss_pred CCEEEEEcCccCC
Q 015570 121 LPYTIVRPGGMER 133 (404)
Q Consensus 121 l~~tIlRpg~~~G 133 (404)
+..-++.||.+..
T Consensus 220 ~~qyvv~pg~~tt 232 (341)
T KOG1478|consen 220 INQYVVQPGIFTT 232 (341)
T ss_pred hhhhcccCceeec
Confidence 7778888888754
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=87.53 E-value=6.9 Score=36.84 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHh
Q 015570 108 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK 171 (404)
Q Consensus 108 sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~ 171 (404)
....+.+.|.+.++++++...-.-+|... ...+.+..++. ....+..++|+.++..+.
T Consensus 168 l~~~a~~kl~~~~~d~vvaN~~~~~~~~~----~~~~~i~~~~~--~~~~~K~~~a~~i~~~~~ 225 (229)
T PRK06732 168 LIKVARASLIKNQADYILANDLTDISADQ----HKALLVSKNEV--YTAQTKEEIADLLLERIE 225 (229)
T ss_pred HHHHHHHHHHHcCCCEEEEecccccCCCC----cEEEEEeCCCe--eeCCCHHHHHHHHHHHHH
Confidence 34455566667899998876543344211 12222332322 244688999999988765
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.01 E-value=0.87 Score=45.50 Aligned_cols=46 Identities=15% Similarity=0.265 Sum_probs=37.3
Q ss_pred EEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCC
Q 015570 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 78 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agV 78 (404)
-++.+|..|++++.+..+.+-+|+||+|+... -..+++.+|.+.|.
T Consensus 65 ~i~i~D~~n~~Sl~emak~~~vivN~vGPyR~--------------hGE~VVkacienG~ 110 (423)
T KOG2733|consen 65 VILIADSANEASLDEMAKQARVIVNCVGPYRF--------------HGEPVVKACIENGT 110 (423)
T ss_pred eEEEecCCCHHHHHHHHhhhEEEEecccccee--------------cCcHHHHHHHHcCC
Confidence 39999999999999999999999999998642 13556666666665
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.63 E-value=2.4 Score=37.92 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=26.4
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCC
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASE 49 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~ 49 (404)
.+.++.+|+.+.+++.+++ .++|++||++|...
T Consensus 66 ~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 66 EALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 4678899999988776643 47999999999764
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=81.85 E-value=12 Score=38.22 Aligned_cols=110 Identities=13% Similarity=0.131 Sum_probs=64.1
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCCC---------------CCc-----------------
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVFD---------------ITG----------------- 57 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~d---------------~~~----------------- 57 (404)
.+..+.||+++.+.+.+++ .++|+|||++|.......+ ..+
T Consensus 104 ~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~ 183 (398)
T PRK13656 104 YAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEP 183 (398)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEee
Confidence 3568899999987776554 4799999999986332100 000
Q ss_pred c------hhhHHHHHHH---HHHHHHhCCC----CEEEEeccCcccCCCCchhhcccc--hHHHHHHHHHHHHHHH----
Q 015570 58 P------YRIDFQATKN---LVDAATIAKV----NHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALIA---- 118 (404)
Q Consensus 58 ~------~~vnv~~~~~---Ll~Aa~~agV----krfI~vSS~gv~~~~~~~~~~~~~--~~y~~sK~~~E~~l~~---- 118 (404)
. ..+.+.|... .+++...+++ -++|-+|..|..... ..+ +..+..|...|...+.
T Consensus 184 ~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~------p~Y~~g~mG~AKa~LE~~~r~La~~ 257 (398)
T PRK13656 184 ATEEEIADTVKVMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTH------PIYWDGTIGKAKKDLDRTALALNEK 257 (398)
T ss_pred CCHHHHHHHHHhhccchHHHHHHHHHhcccccCCcEEEEEecCCcceee------cccCCchHHHHHHHHHHHHHHHHHH
Confidence 0 1123333322 3344444432 266767776653321 112 2567889988887763
Q ss_pred ---CCCCEEEEEcCccC
Q 015570 119 ---SGLPYTIVRPGGME 132 (404)
Q Consensus 119 ---~gl~~tIlRpg~~~ 132 (404)
.|+...++-.+.+.
T Consensus 258 L~~~giran~i~~g~~~ 274 (398)
T PRK13656 258 LAAKGGDAYVSVLKAVV 274 (398)
T ss_pred hhhcCCEEEEEecCccc
Confidence 46777777777653
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=81.12 E-value=5.7 Score=31.95 Aligned_cols=46 Identities=20% Similarity=0.196 Sum_probs=37.4
Q ss_pred hHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 30 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 30 ~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
.+...+..+|.||.+.+...+ ..+..+-+.|++.++ .|+|..+.+.
T Consensus 41 ~l~~~i~~aD~VIv~t~~vsH-------------~~~~~vk~~akk~~i-p~~~~~~~~~ 86 (97)
T PF10087_consen 41 RLPSKIKKADLVIVFTDYVSH-------------NAMWKVKKAAKKYGI-PIIYSRSRGV 86 (97)
T ss_pred HHHHhcCCCCEEEEEeCCcCh-------------HHHHHHHHHHHHcCC-cEEEECCCCH
Confidence 488889999999999998764 357888889999997 5888776554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 404 | ||||
| 1xq6_A | 253 | X-ray Structure Of Gene Product From Arabidopsis Th | 2e-11 |
| >pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 404 | |||
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 2e-41 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 4e-40 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 9e-35 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 3e-34 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 7e-26 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 4e-20 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 1e-13 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 4e-13 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 6e-12 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 5e-11 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 5e-11 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 6e-11 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 7e-09 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 2e-08 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 2e-08 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 3e-08 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 8e-08 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 8e-08 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 2e-07 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 5e-07 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 1e-06 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 3e-05 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 4e-04 |
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-41
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 16/192 (8%)
Query: 12 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVD 71
++ ++V +LE+ A + V+ G+ ID +
Sbjct: 61 LRERGASDIVVANLEE--DFSHAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQ 116
Query: 72 AATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 131
A + FIMVSS+GT P L+ KR A++ L S L YTIVRPG +
Sbjct: 117 EAEKRGIKRFIMVSSVGTVD---PDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPL 173
Query: 132 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL 191
++ + T +T+S + ++ VA+++A + + + K EV+
Sbjct: 174 ---SNE-ESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH-TIGKTFEVLNGD---- 224
Query: 192 TPMEELLAKIPS 203
TP+ +++ ++ S
Sbjct: 225 TPIAKVVEQLGS 236
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 4e-40
Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 19 ELVECDLEKRVQIEPALGNASVVICCIGAS---------------EKEVFDITGPYRIDF 63
++ D+ I PA ++ A E D P ++D+
Sbjct: 51 DVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDW 110
Query: 64 QATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPY 123
KN +DAA +A V H ++V S+G P L +L+WKRKAE+ L SG PY
Sbjct: 111 IGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLADSGTPY 169
Query: 124 TIVRPGGMERPTDAYKETHNITLSQEDTLFG---GQVSNLQVAELLACMAKNRSLSYCKV 180
TI+R GG+ +E + + ++D L V VAE+ + K
Sbjct: 170 TIIRAGGLLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE-AKNKA 225
Query: 181 VEVI---AETTAPLTPMEELLAKIPSQ 204
++ T+ P + L +++ S+
Sbjct: 226 FDLGSKPEGTSTPTKDFKALFSQVTSR 252
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 9e-35
Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 29/209 (13%)
Query: 6 ELANKGIQPV------------EMLELVECDLEKRVQ-IEPALGNASVVICCIGASEKEV 52
L+ Q ++ V D++ + + L +I G+ K
Sbjct: 19 SLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK-- 76
Query: 53 FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRK 111
++D L+ AA A+V FI++S++ + + A + + K
Sbjct: 77 ----SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHF 132
Query: 112 AEEALI-ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA 170
A+ L + L YTI++PG + T+ + T I ++ E + VA+ + +
Sbjct: 133 ADLYLTKETNLDYTIIQPGAL---TEE-EATGLIDINDE---VSASNTIGDVADTIKELV 185
Query: 171 KNRSLSYCKVVEVIAETTAPLTPMEELLA 199
S KV+ + TA +E LL
Sbjct: 186 MTDH-SIGKVISMHNGKTAIKEALESLLE 213
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 3e-34
Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 13/151 (8%)
Query: 18 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 77
+V D+ + ++ + VI +G P + + +N+V A
Sbjct: 48 AHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-----LSPTTVMSEGARNIVAAMKAHG 102
Query: 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MERPTD 136
V+ + +S P + V + + L SGL Y V P ++P
Sbjct: 103 VDKVVACTSAFL--LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQP-- 158
Query: 137 AYKETHNITLSQEDTLFGGQVSNLQVAELLA 167
T T++ + +S + +
Sbjct: 159 ---LTGAYTVTLDGRGPSRVISKHDLGHFML 186
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 7e-26
Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 21/181 (11%)
Query: 18 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 77
+++ D+ ++ A+ +V + +D QA +++ A
Sbjct: 69 SQIIMGDVLNHAALKQAMQGQDIVYANLTGE-----------DLDIQA-NSVIAAMKACD 116
Query: 78 VNHFIMVSSLGTNK---FGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MER 133
V I V SLG F + L R+A +A+ ASGL YTI+RP +
Sbjct: 117 VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDE 176
Query: 134 PTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTP 193
Y+ T + + G VS VA L+ + + + + T P
Sbjct: 177 DIIDYELTS-----RNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDGDKP 231
Query: 194 M 194
Sbjct: 232 F 232
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 87.4 bits (216), Expect = 4e-20
Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 21/159 (13%)
Query: 18 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 77
+ ++E + +E A+ NA VV ++V A +
Sbjct: 54 VTVIEGSFQNPGXLEQAVTNAEVVFVGAME--------------SGSDMASIVKALSRXN 99
Query: 78 VNHFIMVSSLGTN----KFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMER 133
+ I VS G + NL + +R+A L S L YTI+R +
Sbjct: 100 IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWL-- 157
Query: 134 PTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 172
+ + T + + QVS V + + +
Sbjct: 158 -YNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHA 195
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 1e-13
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 10/116 (8%)
Query: 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 74
+ + D EK A V CC+G + + R+D + A
Sbjct: 62 YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGF-VRVDRDYVLKSAELAK 120
Query: 75 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPG 129
HF ++SS G +K N + + K + E + Y++ RPG
Sbjct: 121 AGGCKHFNLLSSKGADKSS------NFLYLQV--KGEVEAKVEELKFDRYSVFRPG 168
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 4e-13
Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 17/128 (13%)
Query: 6 ELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQA 65
EL +G E+V+ D + +V +E AL A + + + +
Sbjct: 47 ELRLQGA------EVVQGDQDDQVIMELALNGAYATFIVT------NYWESCSQEQEVKQ 94
Query: 66 TKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTI 125
K L D A +++ + K F G K + EE G+P T
Sbjct: 95 GKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDG----KGEVEEYFRDIGVPMTS 150
Query: 126 VRPGG-ME 132
VR E
Sbjct: 151 VRLPCYFE 158
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 6e-12
Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 20/133 (15%)
Query: 14 PVEMLELVECDLEKRVQIEPAL-GNASVVICCIG-----ASEKEVFDITGPYRIDFQATK 67
+ ++ + ++ P L G+ CC+G A +E F +DF
Sbjct: 41 ALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAF-----RAVDFDLPL 95
Query: 68 NLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP-YTIV 126
+ A H+++VS+LG + + V K + E+AL G P TI
Sbjct: 96 AVGKRALEMGARHYLVVSALGADAKSS-----IFYNRV---KGELEQALQEQGWPQLTIA 147
Query: 127 RPGGMERPTDAYK 139
RP + P + ++
Sbjct: 148 RPSLLFGPREEFR 160
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 62.3 bits (151), Expect = 5e-11
Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 10/111 (9%)
Query: 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 78
+L+E L+ ++ AL VVI + G LV+A A
Sbjct: 58 KLIEASLDDHQRLVDALKQVDVVISALAG---------GVLSHHILEQLKLVEAIKEAGN 108
Query: 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 129
+ S G + A+ + KRK A+ A+ +PYT V
Sbjct: 109 IKRFLPSEFGMDPDIMEHALQP-GSITFIDKRKVRRAIEAASIPYTYVSSN 158
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 5e-11
Identities = 18/127 (14%), Positives = 35/127 (27%), Gaps = 12/127 (9%)
Query: 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI 75
E L++ + D+ ++ A VI Y + ++D
Sbjct: 46 EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN----PDIYDETIKVYLTIIDGVKK 101
Query: 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK--------AEEALIASGLPYTIVR 127
A VN F+MV G+ +++ + + +
Sbjct: 102 AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161
Query: 128 PGGMERP 134
P RP
Sbjct: 162 PAADMRP 168
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 6e-11
Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 15/112 (13%)
Query: 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 78
+V ++ + A+ N VVI +G+ + ++ N++ A
Sbjct: 59 NIVHGSIDDHASLVEAVKNVDVVISTVGS-------------LQIESQVNIIKAIKEVGT 105
Query: 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 130
S G + A V K K A+ A G+PYT V
Sbjct: 106 VKRFFPSEFGNDVDNVHAVEPAK--SVFEVKAKVRRAIEAEGIPYTYVSSNC 155
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 1e-09
Identities = 20/112 (17%), Positives = 32/112 (28%), Gaps = 15/112 (13%)
Query: 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 78
L+E D+ + A+ +VIC G + ++ A A
Sbjct: 58 ILLEGDINDHETLVKAIKQVDIVICAAGRL-------------LIEDQVKIIKAIKEAGN 104
Query: 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 130
S G + A V K + A G+PYT +
Sbjct: 105 VKKFFPSEFGLDVDRHDAVEPVRQ--VFEEKASIRRVIEAEGVPYTYLCCHA 154
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 2e-09
Identities = 75/459 (16%), Positives = 136/459 (29%), Gaps = 162/459 (35%)
Query: 7 LANKGIQPVEML--ELVECD---LEKRVQIE---PALGNASVVICCIGA--SEKEVFDIT 56
L +K + V+ E++ + L ++ E P++ + I ++ +VF
Sbjct: 71 LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM-MTRMYIEQRDRLYNDNQVFA-- 127
Query: 57 GPY---RIDFQATKNLVDAATIAKVNHFIMV--------SSLGTN---------KFGFPA 96
Y R+ Q L A + +++ + + + K F
Sbjct: 128 -KYNVSRL--QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF-- 182
Query: 97 AILNLFWGVLLWKRKAEEALIA--SGLPYTIVRPGGMERPTDAYKETHNITLSQE--DTL 152
+FW + L + E ++ L + P R + I Q L
Sbjct: 183 ---KIFW-LNLKNCNSPETVLEMLQKL-LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237
Query: 153 FGGQ-----------VSNLQVAEL--LAC----MAKNRS----LSYCKVVEV-IAETTAP 190
+ V N + L+C + + LS + + +
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 191 LTPME--ELLAKIPSQRAE--PKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVT 246
LTP E LL K R + P+E + ++P S+I+E I +
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVL---TTNPRRL-SIIAES----IRDGLATWD---- 345
Query: 247 DPLSPYTSYEDLKPPTSPTPTAPSGKKDSTI---VDGLPMSGISDAQTSTSGVKTGITET 303
+ + K + I ++ L
Sbjct: 346 -----NWKHVNCD------------KLTTIIESSLNVLE--------------------- 367
Query: 304 VSAPEELSKARPLSPYFAYEDLK--PPSSPSPTPSGPKEVLS------SSSTTGEVASQL 355
P E R + ++ L PPS+ PT +LS S V ++L
Sbjct: 368 ---PAEY---RKM-----FDRLSVFPPSAHIPT-----ILLSLIWFDVIKSDVMVVVNKL 411
Query: 356 TGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPP 394
SLVEK P ++I +Y +LK
Sbjct: 412 H---------KYSLVEKQPKESTISIP---SIYLELKVK 438
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 7e-09
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 29/127 (22%)
Query: 6 ELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQA 65
LA++G+ E+ D + ++ A S + I+GP+ +
Sbjct: 41 TLADQGV------EVRHGDYNQPESLQKAFAGVSKL-----------LFISGPHYDNTLL 83
Query: 66 T---KNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP 122
N+V AA A V H + P A E A+ + +P
Sbjct: 84 IVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLA---------HVHLATEYAIRTTNIP 134
Query: 123 YTIVRPG 129
YT +R
Sbjct: 135 YTFLRNA 141
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 2e-08
Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 23/116 (19%)
Query: 19 ELVECDLEKRVQ-IEPALGNASVVICCIGASEKEVFDITGPYRID-FQATKNLVDAA-TI 75
L + L V ++ A + F T D K+L DAA
Sbjct: 54 TLFQGPLLNNVPLMDTLFEGAHLA-----------FINTTSQAGDEIAIGKDLADAAKRA 102
Query: 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--KRKAEEALIASGLPYTIVRPG 129
+ H+I SS+ ++ + V +W K E + GLP T V G
Sbjct: 103 GTIQHYI-YSSMP------DHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAG 151
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 2e-08
Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 27/125 (21%)
Query: 6 ELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRID-FQ 64
LA +GI + + D + AL + I+
Sbjct: 40 ALAAQGI------TVRQADYGDEAALTSALQGVEKL-----------LLISSSEVGQRAP 82
Query: 65 ATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYT 124
+N+++AA A V S L + A + E+ L SG+ YT
Sbjct: 83 QHRNVINAAKAAGVKFIAYTSLLHADTSPLGLAD---------EHIETEKMLADSGIVYT 133
Query: 125 IVRPG 129
++R G
Sbjct: 134 LLRNG 138
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 3e-08
Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 21/129 (16%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYR 60
++L E + G+ ++E ++E+ ++ L +VI +
Sbjct: 47 VQLREEFRSMGV------TIIEGEMEEHEKMVSVLKQVDIVISALPFP------------ 88
Query: 61 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 120
+ ++++A A + S G + L F VL KR A+ A+
Sbjct: 89 -MISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKP--LPPFESVLEKKRIIRRAIEAAA 145
Query: 121 LPYTIVRPG 129
LPYT V
Sbjct: 146 LPYTYVSAN 154
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 8e-08
Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 15/112 (13%)
Query: 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 78
+V+ +L++ ++ + VVI + +++A +A
Sbjct: 61 IIVKGELDEHEKLVELMKKVDVVISALAFP-------------QILDQFKILEAIKVAGN 107
Query: 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 130
+ S G L F ++ KR A+ + +PYT V
Sbjct: 108 IKRFLPSDFGVE--EDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANC 157
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 8e-08
Identities = 25/127 (19%), Positives = 38/127 (29%), Gaps = 28/127 (22%)
Query: 6 ELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQA 65
+ + + + D + + A V+ I + F RI
Sbjct: 40 DDWRGKV------SVRQLDYFNQESMVEAFKGMDTVVF-IPSIIHPSFK-----RI--PE 85
Query: 66 TKNLVDAATIAKVNHFIMVSSLG---TNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP 122
+NLV AA + V H I + N F + A L SG+
Sbjct: 86 VENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSP-----------YFGYASRLLSTSGID 134
Query: 123 YTIVRPG 129
YT VR
Sbjct: 135 YTYVRMA 141
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 23/127 (18%), Positives = 34/127 (26%), Gaps = 13/127 (10%)
Query: 18 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 77
E ++ +E AL VI G T A A+
Sbjct: 58 PECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR 117
Query: 78 VNHFIMVSS---LGTNKFGFPA---AILNLFWGVLLW----KRKAEEA---LIASGLPYT 124
V + V S + + G P + K +E +GLP
Sbjct: 118 VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVV 177
Query: 125 IVRPGGM 131
I PG +
Sbjct: 178 IGIPGMV 184
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 5e-07
Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 24/163 (14%)
Query: 18 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 77
+ +++ D+ L + +VV+ G S + +L+
Sbjct: 44 INILQKDIFDLT--LSDLSDQNVVVDAYGIS-------PDEAEKHVTSLDHLISVLNGTV 94
Query: 78 VNHFIMVSSLGTNKFGFPAAIL--------NLFWGVLLWKRKAEEALIA--SGLPYTIVR 127
++V + + L ++ + K E L + + +T +
Sbjct: 95 SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYIS 154
Query: 128 PGGM---ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 167
P M T Y+ + L D +S A +
Sbjct: 155 PSAMFEPGERTGDYQIGKDHLLFGSDG--NSFISMEDYAIAVL 195
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 1e-06
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 23/132 (17%)
Query: 1 MKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL--GNASVVICCIGASEKEVFDITGP 58
K+ L +KG +V + ++ +E L +V+ +G
Sbjct: 51 AKIFKALEDKGA------IIVYGLINEQEAMEKILKEHEIDIVVSTVGGES--------- 95
Query: 59 YRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA 118
I Q LV A + S G + + + KR+ + +
Sbjct: 96 --ILDQ--IALVKAMKAVGTIKRFLPSEFGHDVNRADP--VEPGLNMYREKRRVRQLVEE 149
Query: 119 SGLPYTIVRPGG 130
SG+P+T +
Sbjct: 150 SGIPFTYICCNS 161
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 37/141 (26%)
Query: 6 ELANKGIQPVEMLELVECDLEKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRIDFQ 64
+ G+Q + D+ + + + +++ C+ ASE + +
Sbjct: 37 QPMPAGVQTLI------ADVTRPDTLASIVHLRPEILVYCVAASE---YSDEHYRLSYVE 87
Query: 65 ATKNLVDAATIAKVNHFIMVSSLG---------------TNKFGFPAAILNLFWGVLLWK 109
+N + A A + H VSS G F +
Sbjct: 88 GLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRM---------- 137
Query: 110 RKAEEALIASGLPYTIVRPGG 130
+AE L + TI+R G
Sbjct: 138 LEAEALL--AAYSSTILRFSG 156
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 4e-04
Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 15/118 (12%)
Query: 24 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 83
E V E L + V+ + +G + +LV + +
Sbjct: 49 VKEPLVLTEADLDSVDAVVDALSVPWG-----SGRGYLHLDFATHLVSLLRNSDTLAVFI 103
Query: 84 VSSL--------GTNKFGFPAAILNLFW--GVLLWKRKAEEALIASGLPYTIVRPGGM 131
+ S FP + + W G L + + + + + + + P
Sbjct: 104 LGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEA 161
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 404 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.87 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.87 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.87 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.86 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.85 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.85 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.84 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.84 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.84 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.84 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.83 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.83 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.83 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.82 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.82 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.82 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.82 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.82 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.82 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.82 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.81 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.81 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.81 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.81 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.8 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.8 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.8 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.8 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.8 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.8 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.8 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.8 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.8 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.79 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.79 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.79 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.79 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.79 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.78 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.78 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.78 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.78 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.78 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.78 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.77 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.77 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.77 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.77 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.76 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.76 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.76 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.76 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.76 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.76 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.76 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.75 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.75 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.75 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.75 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.75 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.75 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.75 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.74 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.74 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.73 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.73 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.73 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.72 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.72 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.71 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.71 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.71 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.71 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.71 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.7 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.7 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.7 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.7 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.7 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.69 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.69 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.69 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.69 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.69 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.69 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.67 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.65 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.64 | |
| 3mhp_C | 26 | TIC62_peptide, ferredoxin--NADP reductase, LEAF is | 99.59 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.58 | |
| 3mhp_C | 26 | TIC62_peptide, ferredoxin--NADP reductase, LEAF is | 99.52 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.47 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.47 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.4 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.4 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.39 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.38 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.37 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.37 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.36 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.35 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.34 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.34 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.34 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.33 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.33 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.33 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.32 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.32 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.31 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.31 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.31 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.3 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.3 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.3 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.3 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.3 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.29 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.28 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.28 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.28 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.28 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.27 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.27 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.26 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.26 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.25 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.25 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.25 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.25 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.24 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.24 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.24 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.24 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.23 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.23 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.23 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.23 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.23 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.23 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.22 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.22 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.22 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.22 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.22 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.21 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.21 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.21 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.21 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.21 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.2 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.2 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.2 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.2 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.19 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.19 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.19 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.19 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.19 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.18 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.18 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.18 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.18 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.18 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.18 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.18 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.17 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.17 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.17 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.17 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.16 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.16 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.16 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.16 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.16 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.16 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.16 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.16 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.16 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.15 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.15 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.15 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.15 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.15 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.15 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.15 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.14 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.14 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.14 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.14 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.14 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.13 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.13 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.13 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.13 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.13 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.12 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.12 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.12 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.12 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.12 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.12 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.12 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.11 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.11 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.11 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.11 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.11 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.11 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.1 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.1 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.1 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.1 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.1 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.1 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.1 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.09 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.09 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.09 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.08 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.08 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.07 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.07 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.07 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.07 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.06 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.06 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.05 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.05 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.05 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.05 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.05 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.05 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.05 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.04 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.04 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.04 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.04 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.04 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.03 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.03 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.03 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.02 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.02 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.02 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.02 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.01 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.01 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.01 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.01 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.0 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.99 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.99 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.98 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.98 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.97 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.96 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.96 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.96 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.95 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.95 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.95 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.94 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.94 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.92 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.92 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.92 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.92 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.91 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.9 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.89 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.89 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.89 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.88 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.88 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.85 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.82 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.81 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.81 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.79 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.76 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.76 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.74 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.74 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.7 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.67 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.66 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.64 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.63 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.59 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.58 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.58 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.58 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.51 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.5 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.41 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.4 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.39 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.39 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.38 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.38 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.32 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.24 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.12 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.08 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.88 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.79 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.7 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.45 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.41 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.39 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 97.29 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 97.14 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 96.61 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 96.38 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.19 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 96.03 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 95.86 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 95.76 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 94.95 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 93.97 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 92.79 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 92.53 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 91.71 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 89.71 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 88.85 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 88.4 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 87.14 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 87.12 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 84.54 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 82.64 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 80.46 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 80.02 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-21 Score=186.39 Aligned_cols=184 Identities=11% Similarity=0.013 Sum_probs=153.2
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC---
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG--- 93 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~--- 93 (404)
+++++.+|+. .+.+.++++++|+||||++..... ++...+++|+.++.+|+++|++.+++||||+||.++++..
T Consensus 43 ~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~ 119 (311)
T 3m2p_A 43 DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSL 119 (311)
T ss_dssp CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGC
T ss_pred ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCC
Confidence 8999999999 999999999999999999987544 6677889999999999999999999999999998886532
Q ss_pred --CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEEccCCccccCc
Q 015570 94 --FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQ 156 (404)
Q Consensus 94 --~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~~~~~~~~~~~ 156 (404)
.+.....+...|+.+|..+|++++. .|+++++||++++||+..... ....+.+.+.+...+.+
T Consensus 120 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 199 (311)
T 3m2p_A 120 PWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREF 199 (311)
T ss_dssp SBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEE
T ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEce
Confidence 1222345567899999999999986 799999999999999866421 12234454555566789
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 157 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 157 Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
|+++|+|++++.+++++. .+++|||++++. +++.|+++.+.+..|..
T Consensus 200 v~v~Dva~a~~~~~~~~~--~~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 246 (311)
T 3m2p_A 200 LYAKDAAKSVIYALKQEK--VSGTFNIGSGDA---LTNYEVANTINNAFGNK 246 (311)
T ss_dssp EEHHHHHHHHHHHTTCTT--CCEEEEECCSCE---ECHHHHHHHHHHHTTCT
T ss_pred EEHHHHHHHHHHHHhcCC--CCCeEEeCCCCc---ccHHHHHHHHHHHhCCC
Confidence 999999999999998875 489999999875 99999999999998854
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-22 Score=194.54 Aligned_cols=189 Identities=14% Similarity=0.030 Sum_probs=153.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|+.|.+.+.++++++|+||||||.... ...++...+++|+.++.+|+++|++.+++||||+||.++++..
T Consensus 79 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~ 158 (351)
T 3ruf_A 79 SRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDH 158 (351)
T ss_dssp TTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC
T ss_pred CceEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCC
Confidence 68999999999999999999999999999997532 1234455678999999999999999999999999999887543
Q ss_pred C-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc---------------CcccEEEccC
Q 015570 94 F-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQE 149 (404)
Q Consensus 94 ~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~---------------~~~~i~~~~~ 149 (404)
. +.....+...|+.+|..+|++++. .|+++++||++++||++.... ....+.+.++
T Consensus 159 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 238 (351)
T 3ruf_A 159 PALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGD 238 (351)
T ss_dssp CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESS
T ss_pred CCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCC
Confidence 1 122345567899999999999874 599999999999999865422 0122344445
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
+...+.+|+++|||++++.++.+.....+++|||++++. +++.|+++.+.+..|.
T Consensus 239 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~---~s~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 239 GETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDR---TTLNELSGYIYDELNL 293 (351)
T ss_dssp SCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCC---EEHHHHHHHHHHHHHT
T ss_pred CCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCc---ccHHHHHHHHHHHhCc
Confidence 556678999999999999999874335689999999875 9999999999999886
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=189.70 Aligned_cols=190 Identities=12% Similarity=0.046 Sum_probs=153.1
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 15 VEMLELVECDLEKRVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
..+++++.+|+.|.+.+..++++ +|+|||||+.... ...++...+++|+.++.+|+++|++.+++||||+||.+++
T Consensus 74 ~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy 153 (346)
T 4egb_A 74 HPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVY 153 (346)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGG
T ss_pred CCCeEEEEcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHh
Confidence 36899999999999999999987 9999999997642 2345677789999999999999999999999999999886
Q ss_pred CCC------CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEEccC
Q 015570 91 KFG------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQE 149 (404)
Q Consensus 91 ~~~------~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~~~~ 149 (404)
+.. .+.....+...|+.+|..+|++++. .|+++++||++++||++.... ....+.+.++
T Consensus 154 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (346)
T 4egb_A 154 GSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGD 233 (346)
T ss_dssp CCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETT
T ss_pred CCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCC
Confidence 643 1122345567899999999999986 699999999999999865321 1122445455
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+...+.+|+++|+|++++.++.+.. .+++|||++++. +++.|+++.+.+..|.+.
T Consensus 234 ~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~~~---~s~~e~~~~i~~~~g~~~ 288 (346)
T 4egb_A 234 GLNVRDWLHVTDHCSAIDVVLHKGR--VGEVYNIGGNNE---KTNVEVVEQIITLLGKTK 288 (346)
T ss_dssp SCCEECEEEHHHHHHHHHHHHHHCC--TTCEEEECCSCC---EEHHHHHHHHHHHHTCCG
T ss_pred CCeEEeeEEHHHHHHHHHHHHhcCC--CCCEEEECCCCc---eeHHHHHHHHHHHhCCCc
Confidence 5566789999999999999998876 478999999875 999999999999998643
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.7e-22 Score=190.24 Aligned_cols=189 Identities=14% Similarity=0.084 Sum_probs=149.4
Q ss_pred CeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCC---CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 17 MLELVECDLEKRVQIEPALGN--ASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~---~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
+++++.+|+.|.+.+.+++++ +|+|||||+.... ...++...+++|+.++.+|+++|++.+++||||+||.++++
T Consensus 39 ~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg 118 (319)
T 4b8w_A 39 FVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFP 118 (319)
T ss_dssp ECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSC
T ss_pred ccCceecccCCHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcC
Confidence 455568999999999999986 9999999998541 23455567899999999999999999999999999998865
Q ss_pred CCCc-----hh----hcccc-hHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc------------------
Q 015570 92 FGFP-----AA----ILNLF-WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK------------------ 139 (404)
Q Consensus 92 ~~~~-----~~----~~~~~-~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~------------------ 139 (404)
.... .. ...+. ..|+.+|..+|++++. .|+++++||++++||++....
T Consensus 119 ~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 198 (319)
T 4b8w_A 119 DKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAK 198 (319)
T ss_dssp SSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHh
Confidence 4211 11 12222 3699999999999875 699999999999999876421
Q ss_pred -CcccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 140 -ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 140 -~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
....+.+.+++...+.+|+++|||++++.++.+.....+++|||++++. +++.|+++.+.+..|..
T Consensus 199 ~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 265 (319)
T 4b8w_A 199 SSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDE---VSIKEAAEAVVEAMDFH 265 (319)
T ss_dssp HHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGC---EEHHHHHHHHHHHTTCC
T ss_pred ccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCc---eeHHHHHHHHHHHhCCC
Confidence 1123455555666678999999999999999886545678999998775 99999999999999854
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=190.84 Aligned_cols=189 Identities=17% Similarity=0.053 Sum_probs=152.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC--
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-- 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~-- 93 (404)
.+++++.+|+.|.+.+..++.++|+|||||+.......++...+++|+.++.+|+++|++.+++||||+||.++++..
T Consensus 56 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~ 135 (347)
T 4id9_A 56 TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRP 135 (347)
T ss_dssp SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSC
T ss_pred CCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCC
Confidence 689999999999999999999999999999987554444466788999999999999999999999999999887651
Q ss_pred -----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccC-------------CCCCCc-------------
Q 015570 94 -----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGME-------------RPTDAY------------- 138 (404)
Q Consensus 94 -----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~-------------G~~~~~------------- 138 (404)
.+.....+...|+.+|..+|++++. .|+++++||++++| |++...
T Consensus 136 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~ 215 (347)
T 4id9_A 136 EFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNA 215 (347)
T ss_dssp SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCH
T ss_pred CCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchh
Confidence 2222445677899999999999973 69999999999999 654211
Q ss_pred ---------cCcccEEEccCCccccCc----ccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 139 ---------KETHNITLSQEDTLFGGQ----VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 139 ---------~~~~~i~~~~~~~~~~~~----Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
.....+.+.+++...+.+ |+++|||++++.++.++. ..+++|||++++. +++.|+++.+.+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~~ni~~~~~---~s~~e~~~~i~~~~ 291 (347)
T 4id9_A 216 AIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE-AAGGTFNLGADEP---ADFAALLPKIAALT 291 (347)
T ss_dssp HHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG-GTTEEEEESCSSC---EEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc-cCCCeEEECCCCc---ccHHHHHHHHHHHh
Confidence 011123344444455567 999999999999999875 3589999999875 99999999999998
Q ss_pred CCC
Q 015570 206 AEP 208 (404)
Q Consensus 206 g~~ 208 (404)
|.+
T Consensus 292 g~~ 294 (347)
T 4id9_A 292 GLP 294 (347)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=172.20 Aligned_cols=171 Identities=20% Similarity=0.254 Sum_probs=141.2
Q ss_pred CCeEEEEcCCCC-HhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 16 EMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 16 ~gveiV~gDl~d-~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
.+++++.+|+.| .+++.++++++|+||||+|.... ..+++|+.++.+|+++|++.+++||||+||.+++....
T Consensus 41 ~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~ 114 (219)
T 3dqp_A 41 NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEK 114 (219)
T ss_dssp TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGG
T ss_pred CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCc
Confidence 789999999999 99999999999999999998652 35678899999999999999999999999987754221
Q ss_pred -chhhcccchHHHHHHHHHHHHH-HHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhC
Q 015570 95 -PAAILNLFWGVLLWKRKAEEAL-IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 172 (404)
Q Consensus 95 -~~~~~~~~~~y~~sK~~~E~~l-~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~ 172 (404)
......+...|+.+|..+|+++ +..|++|++|||+++||+.. .+.+.+. .....+++++|||++++.++.+
T Consensus 115 ~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~~----~~~~~~~---~~~~~~i~~~Dva~~i~~~l~~ 187 (219)
T 3dqp_A 115 WIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEA----TGLIDIN---DEVSASNTIGDVADTIKELVMT 187 (219)
T ss_dssp CCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECSCC----CSEEEES---SSCCCCEEHHHHHHHHHHHHTC
T ss_pred ccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecCCC----CCccccC---CCcCCcccHHHHHHHHHHHHhC
Confidence 0122345678999999999999 67899999999999998643 2333332 4456789999999999999998
Q ss_pred CCCCCCcEEEEEcCCCCCCccHHHHHHHcccc
Q 015570 173 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204 (404)
Q Consensus 173 ~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~ 204 (404)
+. ..+++|+|.++. .++.|++....+.
T Consensus 188 ~~-~~g~~~~i~~g~----~~~~e~~~~~~~~ 214 (219)
T 3dqp_A 188 DH-SIGKVISMHNGK----TAIKEALESLLEH 214 (219)
T ss_dssp GG-GTTEEEEEEECS----EEHHHHHHTTTTT
T ss_pred cc-ccCcEEEeCCCC----ccHHHHHHHHHHh
Confidence 76 568999999886 9999999876553
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=182.05 Aligned_cols=188 Identities=12% Similarity=0.026 Sum_probs=151.9
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
..+++++.+|+.| +.+.++++++|+||||++.... ...++...+++|+.++.+|+++|++.+++||||+||.++++.
T Consensus 42 ~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~ 120 (313)
T 3ehe_A 42 NEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGE 120 (313)
T ss_dssp CTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCS
T ss_pred CCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCc
Confidence 4679999999999 9999999999999999996422 234556678899999999999999999999999999988754
Q ss_pred CC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEEccCCcc
Q 015570 93 GF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTL 152 (404)
Q Consensus 93 ~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~~~~~~~ 152 (404)
.. +.....+...|+.+|..+|++++. .|+++++||++++||++.... ....+.+.+.+..
T Consensus 121 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 200 (313)
T 3ehe_A 121 AKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQ 200 (313)
T ss_dssp CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCe
Confidence 32 112344567899999999999874 699999999999999865421 1123445556666
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+.+|+++|||++++.+++.. ..+++|||++++. +++.|+++.+.+.+|.+
T Consensus 201 ~~~~i~v~Dva~a~~~~~~~~--~~~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 251 (313)
T 3ehe_A 201 NKSYIYISDCVDAMLFGLRGD--ERVNIFNIGSEDQ---IKVKRIAEIVCEELGLS 251 (313)
T ss_dssp EECCEEHHHHHHHHHHHTTCC--SSEEEEECCCSCC---EEHHHHHHHHHHHTTCC
T ss_pred EEeEEEHHHHHHHHHHHhccC--CCCceEEECCCCC---eeHHHHHHHHHHHhCCC
Confidence 778999999999999999833 3478999999875 99999999999998854
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=175.05 Aligned_cols=171 Identities=25% Similarity=0.336 Sum_probs=140.5
Q ss_pred CCe-EEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 16 EML-ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 16 ~gv-eiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
.++ +++.+|++ +.+.+++.++|+||||+|.... .++...+++|+.++.+|+++|++.+++||||+||.+......
T Consensus 64 ~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~ 139 (236)
T 3e8x_A 64 RGASDIVVANLE--EDFSHAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQ 139 (236)
T ss_dssp TTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCTT--SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGG
T ss_pred CCCceEEEcccH--HHHHHHHcCCCEEEECCCCCCC--CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCC
Confidence 378 99999999 7888899999999999997643 356667888999999999999999999999999977654311
Q ss_pred chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 95 PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 95 ~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.. .....|+.+|..+|++++..|+++++||||+++|+.. .+.+...........+++++|||++++.++.++.
T Consensus 140 --~~-~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~----~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 212 (236)
T 3e8x_A 140 --GP-MNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEES----TGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH 212 (236)
T ss_dssp --SC-GGGHHHHHHHHHHHHHHHHSSSEEEEEEECSEECSCC----CSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG
T ss_pred --Ch-hhhhhHHHHHHHHHHHHHHCCCCEEEEeCCcccCCCC----CCeEEeccCCCcccCcEeHHHHHHHHHHHhcCcc
Confidence 11 4567899999999999999999999999999999743 2333333333335678999999999999998876
Q ss_pred CCCCcEEEEEcCCCCCCccHHHHHHHcc
Q 015570 175 LSYCKVVEVIAETTAPLTPMEELLAKIP 202 (404)
Q Consensus 175 ~~~~~i~nI~~~~~~~~~si~ell~~i~ 202 (404)
..+++|++.++. .++.|+++.|.
T Consensus 213 -~~g~~~~v~~~~----~~~~e~~~~i~ 235 (236)
T 3e8x_A 213 -TIGKTFEVLNGD----TPIAKVVEQLG 235 (236)
T ss_dssp -GTTEEEEEEECS----EEHHHHHHTC-
T ss_pred -ccCCeEEEeCCC----cCHHHHHHHhc
Confidence 568999999985 99999999875
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=182.38 Aligned_cols=188 Identities=14% Similarity=0.036 Sum_probs=150.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|++|.+.+.+++.++|+||||+|.... ...++...+++|+.++.+|+++|.+.+++||||+||.++++..
T Consensus 55 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~ 134 (337)
T 1r6d_A 55 PRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSI 134 (337)
T ss_dssp TTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCC
T ss_pred CCeEEEEcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCC
Confidence 58999999999999999999999999999997542 1235566788999999999999999999999999998876532
Q ss_pred -----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEEccCCccc
Q 015570 94 -----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLF 153 (404)
Q Consensus 94 -----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~~~~~~~~ 153 (404)
.+.....+...|+.+|..+|++++. .|+++++||++++||++.... ....+.+...+...
T Consensus 135 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1r6d_A 135 DSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANV 214 (337)
T ss_dssp SSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCE
T ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCee
Confidence 1112334567899999999999864 589999999999999865321 11123443444455
Q ss_pred cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 154 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+.+++++|+|++++.++++.. .+++|||.++.. +++.|+++.+.+.+|.+
T Consensus 215 ~~~i~v~Dva~a~~~~~~~~~--~g~~~~v~~~~~---~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 215 REWVHTDDHCRGIALVLAGGR--AGEIYHIGGGLE---LTNRELTGILLDSLGAD 264 (337)
T ss_dssp EEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCE---EEHHHHHHHHHHHHTCC
T ss_pred EeeEeHHHHHHHHHHHHhCCC--CCCEEEeCCCCC---ccHHHHHHHHHHHhCCC
Confidence 679999999999999998654 478999999875 89999999999988864
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=182.46 Aligned_cols=183 Identities=15% Similarity=0.066 Sum_probs=139.7
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC--
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-- 94 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~-- 94 (404)
+++++.+|+.|.+.+.++++++|+||||+|.......++...+++|+.++.+|+++|++.|++||||+||.++++...
T Consensus 57 ~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~ 136 (342)
T 2x4g_A 57 EPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQG 136 (342)
T ss_dssp CCEEEECCTTCHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTS
T ss_pred CeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCC
Confidence 789999999999999999999999999999765444567788999999999999999999999999999998865321
Q ss_pred ----chhhccc----chHHHHHHHHHHHHHHH---CCCCEEEEEcCccCCCCC-Ccc-C-------cc-cEEEccCCccc
Q 015570 95 ----PAAILNL----FWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTD-AYK-E-------TH-NITLSQEDTLF 153 (404)
Q Consensus 95 ----~~~~~~~----~~~y~~sK~~~E~~l~~---~gl~~tIlRpg~~~G~~~-~~~-~-------~~-~i~~~~~~~~~ 153 (404)
+.....+ ...|+.+|+.+|++++. .|+++++|||+++||++. ... . .+ .+.+ +...
T Consensus 137 ~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 213 (342)
T 2x4g_A 137 LPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQ 213 (342)
T ss_dssp SCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCE
T ss_pred CCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCC
Confidence 1223334 67899999999999875 499999999999999865 200 0 01 1111 2234
Q ss_pred cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 154 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
..+++++|||++++.+++++.. +++|||.++. +++.|+++.+.+..|.+
T Consensus 214 ~~~i~v~Dva~~~~~~~~~~~~--g~~~~v~~~~----~s~~e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 214 RNVIDAAEAGRGLLMALERGRI--GERYLLTGHN----LEMADLTRRIAELLGQP 262 (342)
T ss_dssp EEEEEHHHHHHHHHHHHHHSCT--TCEEEECCEE----EEHHHHHHHHHHHHTCC
T ss_pred cceeeHHHHHHHHHHHHhCCCC--CceEEEcCCc----ccHHHHHHHHHHHhCCC
Confidence 5689999999999999987663 7899999886 89999999999988854
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.8e-20 Score=183.10 Aligned_cols=187 Identities=14% Similarity=-0.008 Sum_probs=149.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC---CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~---~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
.+++++.+|+.|.+.+.++++++|+||||++..... ..++...+++|+.++.+|+++|++.+++||||+||.++++.
T Consensus 72 ~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~ 151 (379)
T 2c5a_A 72 FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPE 151 (379)
T ss_dssp TCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCG
T ss_pred CCceEEECCCCCHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCC
Confidence 478999999999999999999999999999975421 23456678899999999999999999999999999887653
Q ss_pred CC----------chh--hcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC---------------c
Q 015570 93 GF----------PAA--ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------T 141 (404)
Q Consensus 93 ~~----------~~~--~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~---------------~ 141 (404)
.. +.. ...+...|+.+|..+|++++. .|+++++|||+++||+...... .
T Consensus 152 ~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 231 (379)
T 2c5a_A 152 FKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTS 231 (379)
T ss_dssp GGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHC
T ss_pred CCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhC
Confidence 11 111 234567899999999999864 5899999999999998653210 1
Q ss_pred cc-EEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 142 HN-ITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 142 ~~-i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.. +.+.+++...+.+|+++|||++++.+++++. +++|||++++. +++.|+++.+.+..|.+
T Consensus 232 ~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~---~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 293 (379)
T 2c5a_A 232 TDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEM---VSMNEMAEMVLSFEEKK 293 (379)
T ss_dssp SSCEEEESCSCCEECCEEHHHHHHHHHHHHHSSC---CSCEEECCCCC---EEHHHHHHHHHHTTTCC
T ss_pred CCceEEeCCCCeeEEEEEHHHHHHHHHHHhhccC---CCeEEeCCCCc---cCHHHHHHHHHHHhCCC
Confidence 11 4444444556689999999999999998763 67999999875 99999999999988854
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-20 Score=181.91 Aligned_cols=190 Identities=12% Similarity=-0.007 Sum_probs=149.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|+.|.+.+.++++++|+||||||.... ...++...+++|+.++.+|+++|++.+++||||+||.++++..
T Consensus 81 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~ 160 (352)
T 1sb8_A 81 SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDH 160 (352)
T ss_dssp TTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC
T ss_pred CceEEEECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCC
Confidence 58999999999999999999999999999997532 1234556678999999999999999999999999999886543
Q ss_pred C-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc----C-----------cccEEEccC
Q 015570 94 F-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK----E-----------THNITLSQE 149 (404)
Q Consensus 94 ~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~----~-----------~~~i~~~~~ 149 (404)
. +.....+...|+.+|..+|++++. .|+++++|||+++||+..... . ...+.+.++
T Consensus 161 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 240 (352)
T 1sb8_A 161 PGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGD 240 (352)
T ss_dssp CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESS
T ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCC
Confidence 1 112234567899999999999864 589999999999999865321 0 011233344
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc---CCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEP 208 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~---g~~ 208 (404)
+...+.+|+++|||++++.++.+.....+++|||++++. +++.|+++.+.+.. |.+
T Consensus 241 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~---~s~~e~~~~i~~~~~~~g~~ 299 (352)
T 1sb8_A 241 GETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGR---TSLNQLFFALRDGLAENGVS 299 (352)
T ss_dssp SCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCC---EEHHHHHHHHHHHHHHTTCC
T ss_pred CCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCC---ccHHHHHHHHHHHHHhcCCC
Confidence 445567999999999999999864334588999998875 99999999999988 743
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.5e-21 Score=182.66 Aligned_cols=187 Identities=16% Similarity=0.117 Sum_probs=145.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCC-CCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGN-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~g-vDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
..+++++.+|+.|.+.+..++++ +|+||||++... .++..++++|+.++.+|+++|++.+++||||+||.++++..
T Consensus 40 ~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~ 116 (286)
T 3gpi_A 40 PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQE 116 (286)
T ss_dssp CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH---HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCC
T ss_pred ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC---CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCC
Confidence 47899999999999999999987 999999998742 34566778899999999999999999999999999887643
Q ss_pred C-----chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccC--cccEEEccCCccccCcccHHHHHHHH
Q 015570 94 F-----PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQVAELL 166 (404)
Q Consensus 94 ~-----~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~--~~~i~~~~~~~~~~~~Is~~DVA~ai 166 (404)
. +.....+...|+.+|..+|++ +.. +++++||++++||++..... .........+...+.+|+++|+|+++
T Consensus 117 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 194 (286)
T 3gpi_A 117 VEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFI 194 (286)
T ss_dssp CSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHH
T ss_pred CCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHH
Confidence 2 222445567999999999999 777 99999999999998654110 00000112334556799999999999
Q ss_pred HHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 167 ACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 167 ~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+.+++++. ...+++||+++++. +++.|+++.+.+.+|.+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~---~s~~e~~~~i~~~~g~~~ 235 (286)
T 3gpi_A 195 AYLIQQRSHAVPERLYIVTDNQP---LPVHDLLRWLADRQGIAY 235 (286)
T ss_dssp HHHHHHHTTSCCCSEEEECCSCC---EEHHHHHHHHHHHTTCCC
T ss_pred HHHHhhhccCCCCceEEEeCCCC---CCHHHHHHHHHHHcCCCC
Confidence 99998741 13589999998875 999999999999998643
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=186.89 Aligned_cols=189 Identities=17% Similarity=0.157 Sum_probs=150.3
Q ss_pred CCeEEEEcCCC-CHhhHHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 16 EMLELVECDLE-KRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 16 ~gveiV~gDl~-d~~~l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
.+++++.+|+. |.+.+.++++++|+|||||+..... ..++...+++|+.++.+|+++|++.+ +||||+||.++++.
T Consensus 69 ~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 69 ERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGM 147 (372)
T ss_dssp TTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBS
T ss_pred CCeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCC
Confidence 68999999999 9999999999999999999976422 12445567899999999999999999 99999999988664
Q ss_pred CCc-----hhhc-------ccchHHHHHHHHHHHHHHHC---CCCEEEEEcCccCCCCCCcc------------------
Q 015570 93 GFP-----AAIL-------NLFWGVLLWKRKAEEALIAS---GLPYTIVRPGGMERPTDAYK------------------ 139 (404)
Q Consensus 93 ~~~-----~~~~-------~~~~~y~~sK~~~E~~l~~~---gl~~tIlRpg~~~G~~~~~~------------------ 139 (404)
... .... .+...|+.+|+.+|++++.. |+++++||++++||++....
T Consensus 148 ~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 227 (372)
T 3slg_A 148 CADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHI 227 (372)
T ss_dssp CCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHH
T ss_pred CCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHH
Confidence 311 1111 35568999999999999874 99999999999999875310
Q ss_pred -CcccEEEccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEc-CCCCCCccHHHHHHHcccccCCC
Q 015570 140 -ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIA-ETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 140 -~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~-~~~~~~~si~ell~~i~~~~g~~ 208 (404)
....+.+..++...+.+|+++|||++++.+++++.. ..+++|||++ ++. +++.|+++.+.+..|..
T Consensus 228 ~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~---~s~~e~~~~i~~~~g~~ 296 (372)
T 3slg_A 228 VRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNN---FSVRELANKMLELAAEF 296 (372)
T ss_dssp HHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCE---EEHHHHHHHHHHHHHHC
T ss_pred HcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCC---ccHHHHHHHHHHHhCCC
Confidence 112344555555666899999999999999987641 3589999999 454 99999999999988753
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=166.04 Aligned_cols=165 Identities=15% Similarity=0.078 Sum_probs=128.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC--
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-- 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~-- 93 (404)
.+++++.+|+.|.+++.++++++|+||||+|.... ....+++|+.++.+|+++|++.+++||||+||.+++...
T Consensus 46 ~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~ 121 (227)
T 3dhn_A 46 EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWN----NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG 121 (227)
T ss_dssp TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT
T ss_pred CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCC----ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC
Confidence 78999999999999999999999999999987532 233688999999999999999999999999998764321
Q ss_pred --CchhhcccchHHHHHHHHHHHHHH----HCCCCEEEEEcCccCCCCCCccCcccEEEccCC----ccccCcccHHHHH
Q 015570 94 --FPAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQED----TLFGGQVSNLQVA 163 (404)
Q Consensus 94 --~~~~~~~~~~~y~~sK~~~E~~l~----~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~----~~~~~~Is~~DVA 163 (404)
.......+...|+.+|..+|++++ +.|++|++|||+++||++.... .+...... ...+.+|+++|||
T Consensus 122 ~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva 198 (227)
T 3dhn_A 122 LRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTG---RYRLGKDDMIVDIVGNSHISVEDYA 198 (227)
T ss_dssp EEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCC---CCEEESSBCCCCTTSCCEEEHHHHH
T ss_pred CccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccc---ceeecCCCcccCCCCCcEEeHHHHH
Confidence 111233456789999999996665 3689999999999999765321 11111110 1115689999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 164 ELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 164 ~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
++++.+++++. ..+++|++++++.
T Consensus 199 ~ai~~~l~~~~-~~g~~~~~~~~~~ 222 (227)
T 3dhn_A 199 AAMIDELEHPK-HHQERFTIGYLEH 222 (227)
T ss_dssp HHHHHHHHSCC-CCSEEEEEECCSC
T ss_pred HHHHHHHhCcc-ccCcEEEEEeehh
Confidence 99999999988 6799999999985
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=172.33 Aligned_cols=171 Identities=15% Similarity=0.117 Sum_probs=139.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.+.+.++++++|+||||++... . .++|+.++.+|+++|++.|++||||+||.+++...
T Consensus 45 ~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~------~--~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~-- 114 (287)
T 2jl1_A 45 QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHY------D--NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESI-- 114 (287)
T ss_dssp TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCS------C--HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCC--
T ss_pred cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCc------C--chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCC--
Confidence 4789999999999999999999999999998631 1 25799999999999999999999999999875321
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCC-CCcc----CcccEEEccCCccccCcccHHHHHHHHHHHH
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPT-DAYK----ETHNITLSQEDTLFGGQVSNLQVAELLACMA 170 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~-~~~~----~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l 170 (404)
..|+.+|..+|++++..|+++++||+++++++. .... ..+.+... .+.....+++++|||++++.++
T Consensus 115 -------~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~~~~~~~ 186 (287)
T 2jl1_A 115 -------IPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTN-AGSGIVNSVTRNELALAAATVL 186 (287)
T ss_dssp -------STHHHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEES-CTTCCBCCBCHHHHHHHHHHHH
T ss_pred -------CchHHHHHHHHHHHHHcCCCeEEEECCEeccccchhhHHHHhhCCceecc-CCCCccCccCHHHHHHHHHHHh
Confidence 369999999999999999999999999988753 1111 01222222 2334567999999999999999
Q ss_pred hCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 171 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 171 ~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.++. ..+++|||.+++. +++.|+++.+.+.+|.+
T Consensus 187 ~~~~-~~g~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 220 (287)
T 2jl1_A 187 TEEG-HENKTYNLVSNQP---WTFDELAQILSEVSGKK 220 (287)
T ss_dssp TSSS-CTTEEEEECCSSC---BCHHHHHHHHHHHHSSC
T ss_pred cCCC-CCCcEEEecCCCc---CCHHHHHHHHHHHHCCc
Confidence 8765 4578999999864 99999999999998864
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.3e-20 Score=178.87 Aligned_cols=188 Identities=13% Similarity=-0.017 Sum_probs=148.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCC--CCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~--~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
..+++++.+|+.|.+ +.+++++ |+|||||+... ....++...+++|+.++.+|+++|++.+++||||+||.++++.
T Consensus 42 ~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~ 119 (312)
T 3ko8_A 42 NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGD 119 (312)
T ss_dssp CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCS
T ss_pred CCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCC
Confidence 468999999999998 8888888 99999999643 2234555667899999999999999999999999999988754
Q ss_pred CC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEEccCCcc
Q 015570 93 GF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTL 152 (404)
Q Consensus 93 ~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~~~~~~~ 152 (404)
.. +.....+...|+.+|..+|++++. .|+++++|||+++||++.... ....+.+...+..
T Consensus 120 ~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 199 (312)
T 3ko8_A 120 ADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQ 199 (312)
T ss_dssp CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----C
T ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCe
Confidence 32 122345567899999999999875 599999999999999865321 0123344555556
Q ss_pred ccCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 153 FGGQVSNLQVAELLACMAKN---RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~---~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+.+||++|||++++.++++ .. ..+++|||++++. +++.|+++.+.+.+|..
T Consensus 200 ~~~~i~v~Dva~a~~~~~~~~~~~~-~~~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 254 (312)
T 3ko8_A 200 RKSYLYVRDAVEATLAAWKKFEEMD-APFLALNVGNVDA---VRVLDIAQIVAEVLGLR 254 (312)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHSC-CSEEEEEESCSSC---EEHHHHHHHHHHHHTCC
T ss_pred EEeeEEHHHHHHHHHHHHHhccccC-CCCcEEEEcCCCc---eeHHHHHHHHHHHhCCC
Confidence 67899999999999999987 33 3578999999875 99999999999998854
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.82 E-value=8e-20 Score=176.89 Aligned_cols=187 Identities=10% Similarity=0.040 Sum_probs=148.0
Q ss_pred CeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcccC
Q 015570 17 MLELVECDLEKRVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNK 91 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv~~ 91 (404)
+++++.+|+.|.+.+.+++++ +|+||||||.... ...++...+++|+.++.+|+++|.+. +++||||+||.++++
T Consensus 52 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g 131 (321)
T 2pk3_A 52 NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYG 131 (321)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTB
T ss_pred eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcC
Confidence 789999999999999999986 9999999997642 12355667889999999999999876 689999999998765
Q ss_pred CC-------CchhhcccchHHHHHHHHHHHHHHHC----CCCEEEEEcCccCCCCCCccC----------c---c---cE
Q 015570 92 FG-------FPAAILNLFWGVLLWKRKAEEALIAS----GLPYTIVRPGGMERPTDAYKE----------T---H---NI 144 (404)
Q Consensus 92 ~~-------~~~~~~~~~~~y~~sK~~~E~~l~~~----gl~~tIlRpg~~~G~~~~~~~----------~---~---~i 144 (404)
.. .+.....+...|+.+|..+|++++.. |+++++|||+++||++..... . + .+
T Consensus 132 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~ 211 (321)
T 2pk3_A 132 MILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPI 211 (321)
T ss_dssp SCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSE
T ss_pred CCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCe
Confidence 32 11123345678999999999999763 999999999999998654210 0 1 23
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+...+...+.+++++|||++++.++.+.. .+++|||.++.. +++.|+++.+.+..|.+
T Consensus 212 ~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~g~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 212 IKVGNLEAVRDFTDVRDIVQAYWLLSQYGK--TGDVYNVCSGIG---TRIQDVLDLLLAMANVK 270 (321)
T ss_dssp EEESCSSCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEESCSCE---EEHHHHHHHHHHHSSSC
T ss_pred EEeCCCCcEEeeEEHHHHHHHHHHHHhCCC--CCCeEEeCCCCC---eeHHHHHHHHHHHhCCC
Confidence 333344455678999999999999998763 378999998875 99999999999998854
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.5e-20 Score=181.20 Aligned_cols=184 Identities=15% Similarity=0.049 Sum_probs=149.9
Q ss_pred CCeEEEEcCCCCHhhHHHH-hCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 16 EMLELVECDLEKRVQIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a-L~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
.+++++.+|++|.+.+..+ +.++|+||||||.......++...+++|+.++.+|+++|++.+++ |||+||.++++...
T Consensus 68 ~~~~~~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~ 146 (362)
T 3sxp_A 68 FKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTK 146 (362)
T ss_dssp CCSEEEECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCC
T ss_pred cCceEEECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCC
Confidence 4679999999999999998 889999999999776545567778899999999999999999986 99999988865432
Q ss_pred ----chhhcccchHHHHHHHHHHHHHHHCC--CCEEEEEcCccCCCCCCccC---------------cccEEEccCCccc
Q 015570 95 ----PAAILNLFWGVLLWKRKAEEALIASG--LPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLF 153 (404)
Q Consensus 95 ----~~~~~~~~~~y~~sK~~~E~~l~~~g--l~~tIlRpg~~~G~~~~~~~---------------~~~i~~~~~~~~~ 153 (404)
+.....+...|+.+|..+|++++... +++++||++++||++..... ...+.+...+...
T Consensus 147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 226 (362)
T 3sxp_A 147 APNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQL 226 (362)
T ss_dssp SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCE
T ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeE
Confidence 12234566789999999999999754 89999999999998764211 1123333444455
Q ss_pred cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 154 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
+.+|+++|||++++.+++++. .+ +|||++++. +++.|+++.+.+..|
T Consensus 227 ~~~i~v~Dva~ai~~~~~~~~--~g-~~~i~~~~~---~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 227 RDFVYIEDVIQANVKAMKAQK--SG-VYNVGYSQA---RSYNEIVSILKEHLG 273 (362)
T ss_dssp EECEEHHHHHHHHHHHTTCSS--CE-EEEESCSCE---EEHHHHHHHHHHHHC
T ss_pred EccEEHHHHHHHHHHHHhcCC--CC-EEEeCCCCC---ccHHHHHHHHHHHcC
Confidence 679999999999999998765 24 999998875 999999999999988
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=176.59 Aligned_cols=189 Identities=10% Similarity=-0.034 Sum_probs=147.9
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCC-CEEEEeccCcccC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNK 91 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agV-krfI~vSS~gv~~ 91 (404)
..+++++.+|+.|.+.+.+++.++|+||||||.... ...++...+++|+.++.+|+++|.+.++ +||||+||.++++
T Consensus 53 ~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 53 DPRYTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred CCceEEEEcCCCCHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 358999999999999999999999999999997532 1235566789999999999999998875 6999999988765
Q ss_pred CC-----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-----------cccEEEccCCc
Q 015570 92 FG-----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDT 151 (404)
Q Consensus 92 ~~-----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-----------~~~i~~~~~~~ 151 (404)
.. .+.....+...|+.+|..+|++++. .|+++++|||+++||++..... ...+.+...+.
T Consensus 133 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (336)
T 2hun_A 133 DILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGK 212 (336)
T ss_dssp CCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC--
T ss_pred CCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCC
Confidence 32 1112334567899999999999874 6899999999999998653211 11233434444
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
..+.+++++|+|++++.++++.. .+++|||.++.. +++.|+++.+.+.+|..
T Consensus 213 ~~~~~i~v~Dva~~~~~~~~~~~--~g~~~~v~~~~~---~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 213 NVRDWLYVEDHVRAIELVLLKGE--SREIYNISAGEE---KTNLEVVKIILRLMGKG 264 (336)
T ss_dssp -CEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCSCE---ECHHHHHHHHHHHTTCC
T ss_pred ceeeeEEHHHHHHHHHHHHhCCC--CCCEEEeCCCCc---ccHHHHHHHHHHHhCCC
Confidence 55678999999999999997654 478999999875 89999999999988854
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=168.88 Aligned_cols=187 Identities=26% Similarity=0.362 Sum_probs=138.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC---------------CCCCCcchhhHHHHHHHHHHHHHhCCCCE
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKE---------------VFDITGPYRIDFQATKNLVDAATIAKVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~---------------~~d~~~~~~vnv~~~~~Ll~Aa~~agVkr 80 (404)
.+++++.+|+.|.+++.++++++|+||||+|..... ..++...+++|+.++.+|+++|++.+++|
T Consensus 48 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 127 (253)
T 1xq6_A 48 GEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKH 127 (253)
T ss_dssp CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSE
T ss_pred CCeeEEEecCCCHHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCE
Confidence 478899999999999999999999999999975321 01112346899999999999999999999
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCcc---ccCcc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL---FGGQV 157 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~---~~~~I 157 (404)
|||+||.+++....+.... ....|..+|..+|++++..|+++++||||++||+..... .+........ ...++
T Consensus 128 iv~~SS~~~~~~~~~~~~~-~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~ 203 (253)
T 1xq6_A 128 IVVVGSMGGTNPDHPLNKL-GNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR---ELLVGKDDELLQTDTKTV 203 (253)
T ss_dssp EEEEEETTTTCTTCGGGGG-GGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS---CEEEESTTGGGGSSCCEE
T ss_pred EEEEcCccCCCCCCccccc-cchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh---hhhccCCcCCcCCCCcEE
Confidence 9999998875432221111 113488899999999999999999999999999754321 1111111111 23489
Q ss_pred cHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 158 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 158 s~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
+++|||++++.++.++. ..+++|+|.+++....+++.|+++.+.+.+|+
T Consensus 204 ~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 204 PRADVAEVCIQALLFEE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp EHHHHHHHHHHHTTCGG-GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHHcCcc-ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 99999999999998765 45789999987421236777777777777764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=177.83 Aligned_cols=187 Identities=16% Similarity=0.067 Sum_probs=148.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|++|.+.+.++++++|+||||||.... ...++...+++|+.++.+|+++|.+.++ ||||+||.++++..
T Consensus 54 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~ 132 (348)
T 1oc2_A 54 DRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDL 132 (348)
T ss_dssp SSEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCB
T ss_pred CCeEEEECCCCCHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCC
Confidence 58999999999999999999999999999997632 1235566789999999999999999998 99999998876432
Q ss_pred C-----------------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-----------c
Q 015570 94 F-----------------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------T 141 (404)
Q Consensus 94 ~-----------------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-----------~ 141 (404)
. +.....+...|+.+|..+|++++. .|+++++|||+++||++..... .
T Consensus 133 ~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~ 212 (348)
T 1oc2_A 133 PLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAG 212 (348)
T ss_dssp CCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHT
T ss_pred cccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcC
Confidence 1 111234567899999999999875 4899999999999998653211 1
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
..+.+...+...+.+++++|||++++.++++.. .+++|||+++.. +++.|+++.+.+..|..
T Consensus 213 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~g~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 274 (348)
T 1oc2_A 213 IKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR--MGETYLIGADGE---KNNKEVLELILEKMGQP 274 (348)
T ss_dssp CCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC--TTCEEEECCSCE---EEHHHHHHHHHHHTTCC
T ss_pred CCceEecCCCceEeeEEHHHHHHHHHHHhhCCC--CCCeEEeCCCCC---CCHHHHHHHHHHHhCCC
Confidence 122333344455679999999999999997654 478999999875 89999999999988854
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=176.13 Aligned_cols=189 Identities=14% Similarity=0.036 Sum_probs=146.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 17 MLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
+++++.+|+.|.+.+.++++ ++|+||||+|..... ..++...+++|+.++.+|+++|++.+++||||+||.++++.
T Consensus 45 ~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~ 124 (330)
T 2c20_A 45 GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGE 124 (330)
T ss_dssp TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCS
T ss_pred CcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCC
Confidence 78999999999999999998 999999999976421 12445667899999999999999999999999999988653
Q ss_pred CC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCc---------cC------------cc
Q 015570 93 GF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY---------KE------------TH 142 (404)
Q Consensus 93 ~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~---------~~------------~~ 142 (404)
.. +.....+...|+.+|..+|++++. .|+++++||++++||++... .. ..
T Consensus 125 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 204 (330)
T 2c20_A 125 VDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQRE 204 (330)
T ss_dssp CSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSS
T ss_pred CCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCC
Confidence 21 122334567899999999999875 58999999999999975210 00 01
Q ss_pred cEEEcc------CCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 143 NITLSQ------EDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 143 ~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+.+.+ ++...+.+|+++|+|++++.++++.... .+++||+++++. +++.|+++.+.+..|.+
T Consensus 205 ~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 274 (330)
T 2c20_A 205 KIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNG---FSVKEIVDAVREVTNHE 274 (330)
T ss_dssp CEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTC---BCHHHHHHHHHHHTTSC
T ss_pred CeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCC---ccHHHHHHHHHHHhCCC
Confidence 123322 2344557999999999999999764321 368999998875 89999999999988853
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=177.20 Aligned_cols=190 Identities=11% Similarity=-0.003 Sum_probs=147.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++.+|++|.+++.++++ ++|+||||||..... ..+....++.|+.++.+|+++|++.++++|||+||.++++
T Consensus 55 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 134 (341)
T 3enk_A 55 KTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG 134 (341)
T ss_dssp CCCEEECCCTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC
T ss_pred CCceEEEeecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec
Confidence 478999999999999999998 899999999976321 1233456788999999999999999999999999988865
Q ss_pred CCC-----chhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCc------c----------------
Q 015570 92 FGF-----PAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAY------K---------------- 139 (404)
Q Consensus 92 ~~~-----~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~------~---------------- 139 (404)
... +.....+...|+.+|..+|++++. .++++++||++++||+.... .
T Consensus 135 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 214 (341)
T 3enk_A 135 VPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVG 214 (341)
T ss_dssp SCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhc
Confidence 331 112344567899999999999975 35999999999999974310 0
Q ss_pred CcccEEEcc------CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 140 ETHNITLSQ------EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 140 ~~~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
....+.+.+ .+...+.+||++|||++++.++++. ....+++|||++++. +++.|+++.+.+..|.+
T Consensus 215 ~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 287 (341)
T 3enk_A 215 KLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRG---YSVLEVVRAFEKASGRA 287 (341)
T ss_dssp SSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCC---EEHHHHHHHHHHHHCSC
T ss_pred CCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCc---eeHHHHHHHHHHHhCCC
Confidence 011233333 3455567999999999999999762 113489999998875 99999999999998854
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-20 Score=176.39 Aligned_cols=186 Identities=9% Similarity=-0.051 Sum_probs=145.3
Q ss_pred CeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC-CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 17 MLELVECDLEKRVQIEPALG--NASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~-~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
+++++.+|+.|.+.+.++++ ++|+|||||+..... ..++...+++|+.++.+|+++|++.+++||||+||.++++..
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~ 125 (312)
T 2yy7_A 46 SGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPT 125 (312)
T ss_dssp SSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTT
T ss_pred CCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCC
Confidence 67899999999999999998 999999999975321 234556688999999999999999999999999999886542
Q ss_pred C------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc---------------CcccEEEcc
Q 015570 94 F------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQ 148 (404)
Q Consensus 94 ~------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~---------------~~~~i~~~~ 148 (404)
. +.....+...|+.+|..+|++++. .|+++++||++++||+..... ..+.+.+..
T Consensus 126 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (312)
T 2yy7_A 126 TPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFL 205 (312)
T ss_dssp SCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESS
T ss_pred CCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEec
Confidence 1 111234567899999999999864 489999999999999542111 012233344
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCCCC--CCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRSLS--YCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~~~--~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+...+.+|+++|+|++++.+++++... .+++|||++ +. +++.|+++.+.+..|
T Consensus 206 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~---~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 206 SSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MS---FTPTEIANEIKKHIP 261 (312)
T ss_dssp CTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EE---ECHHHHHHHHHTTCT
T ss_pred CCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC-Cc---cCHHHHHHHHHHHCC
Confidence 4445567999999999999999876532 248999987 43 999999999999887
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=175.10 Aligned_cols=186 Identities=16% Similarity=0.077 Sum_probs=145.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccC-ccc
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL-GTN 90 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~-gv~ 90 (404)
.+++++.+|++|.+.+.++++ ++|+|||+++.... ...++...+++|+.++.+|+++|++.+++||||+||. +++
T Consensus 43 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~ 122 (311)
T 2p5y_A 43 KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIY 122 (311)
T ss_dssp TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHH
T ss_pred cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhc
Confidence 478899999999999999998 89999999987532 1234455678999999999999999999999999998 555
Q ss_pred CC-C-----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC--------------cccEEE
Q 015570 91 KF-G-----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------THNITL 146 (404)
Q Consensus 91 ~~-~-----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~--------------~~~i~~ 146 (404)
+. . .+.....+...|+.+|..+|++++. .|+++++|||+++||++..... ...+.+
T Consensus 123 g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (311)
T 2p5y_A 123 GEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTL 202 (311)
T ss_dssp CCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEE
Confidence 42 1 1112234567899999999999864 5899999999999998653211 112333
Q ss_pred c-----cCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 147 S-----QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 147 ~-----~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
. +++...+.+++++|+|++++.+++++ +++|||+++.. +++.|+++.+.+..|.+
T Consensus 203 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~----~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 262 (311)
T 2p5y_A 203 YARKTPGDEGCVRDYVYVGDVAEAHALALFSL----EGIYNVGTGEG---HTTREVLMAVAEAAGKA 262 (311)
T ss_dssp ECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC----CEEEEESCSCC---EEHHHHHHHHHHHHTCC
T ss_pred EecccCCCCCeEEeeEEHHHHHHHHHHHHhCC----CCEEEeCCCCC---ccHHHHHHHHHHHhCCC
Confidence 3 34445567999999999999999764 68999998875 89999999999988853
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=174.58 Aligned_cols=181 Identities=11% Similarity=-0.011 Sum_probs=134.8
Q ss_pred EEcCCCCHhhHHHHhCC-----CCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC-
Q 015570 21 VECDLEKRVQIEPALGN-----ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF- 94 (404)
Q Consensus 21 V~gDl~d~~~l~~aL~g-----vDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~- 94 (404)
+.+|+.|.+.+..++++ +|+||||++.......++...+++|+.++.+|+++|++.++ ||||+||.++++...
T Consensus 47 ~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~ 125 (310)
T 1eq2_A 47 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTS 125 (310)
T ss_dssp CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCS
T ss_pred eccccccHHHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCC
Confidence 67899999999999875 99999999987544445566788999999999999999999 999999998865321
Q ss_pred ----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc---------------CcccEEEccCCc
Q 015570 95 ----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQEDT 151 (404)
Q Consensus 95 ----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~---------------~~~~i~~~~~~~ 151 (404)
+.....+...|+.+|..+|++++. .|+++++|||+++||++.... ....+.+...+.
T Consensus 126 ~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 205 (310)
T 1eq2_A 126 DFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSE 205 (310)
T ss_dssp CBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-----------
T ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCC
Confidence 222345567899999999999975 489999999999999865311 011222333444
Q ss_pred c-ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 152 L-FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 152 ~-~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
. .+.+|+++|+|++++.+++++. +++||+++++. +++.|+++.+.+.+|.+
T Consensus 206 ~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 206 NFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRA---ESFQAVADATLAYHKKG 257 (310)
T ss_dssp --CBCEEEHHHHHHHHHHHHHHCC---CEEEEESCSCC---BCHHHHHHHC-------
T ss_pred cceEccEEHHHHHHHHHHHHhcCC---CCeEEEeCCCc---cCHHHHHHHHHHHcCCC
Confidence 5 6789999999999999998765 78999998874 99999999999998865
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=176.72 Aligned_cols=188 Identities=10% Similarity=0.016 Sum_probs=148.8
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhC--CCC-------EE
Q 015570 15 VEMLELVECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA--KVN-------HF 81 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVk-------rf 81 (404)
..+++++.+|++|.+.+.++++ ++|+||||||.... ...++...+++|+.++.+|+++|.+. +++ ||
T Consensus 49 ~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~i 128 (361)
T 1kew_A 49 SNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRF 128 (361)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEE
T ss_pred CCCeEEEECCCCCHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceE
Confidence 3589999999999999999998 99999999997642 12355667899999999999999998 888 99
Q ss_pred EEeccCcccCCCC---------------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC--
Q 015570 82 IMVSSLGTNKFGF---------------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-- 140 (404)
Q Consensus 82 I~vSS~gv~~~~~---------------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-- 140 (404)
||+||.++++... +.....+...|+.+|..+|++++. .|+++++|||+++||++.....
T Consensus 129 v~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~ 208 (361)
T 1kew_A 129 HHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLI 208 (361)
T ss_dssp EEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHH
T ss_pred EEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHH
Confidence 9999988765321 111234567899999999999875 4899999999999998653211
Q ss_pred ---------cccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 141 ---------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 141 ---------~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
...+.+...+...+.+++++|||++++.++++.. .+++|||.++.. +++.|+++.+.+.+|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~v~~~~~---~s~~e~~~~i~~~~g~ 279 (361)
T 1kew_A 209 PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK--AGETYNIGGHNE---KKNLDVVFTICDLLDE 279 (361)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCE---EEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCC--CCCEEEecCCCe---eeHHHHHHHHHHHhCC
Confidence 1123343444455679999999999999998654 478999999875 8999999999988874
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=180.95 Aligned_cols=188 Identities=13% Similarity=0.049 Sum_probs=143.8
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcccC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNK 91 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv~~ 91 (404)
..+++++.+|+.|.+.+.++++++|+||||++..... ..++...+++|+.++.+|+++|++. +++||||+||.++++
T Consensus 77 ~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg 156 (377)
T 2q1s_A 77 HPAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIA 156 (377)
T ss_dssp CTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC----
T ss_pred CCceEEEECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcC
Confidence 4689999999999999999999999999999975321 1244566789999999999999999 999999999998765
Q ss_pred CCC-------chh---hc-ccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCC---------Cc----cC---
Q 015570 92 FGF-------PAA---IL-NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTD---------AY----KE--- 140 (404)
Q Consensus 92 ~~~-------~~~---~~-~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~---------~~----~~--- 140 (404)
... +.. .. .+...|+.+|..+|++++. .|+++++|||+++||+.. .. ..
T Consensus 157 ~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (377)
T 2q1s_A 157 EKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTP 236 (377)
T ss_dssp ----------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHH
T ss_pred CCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHH
Confidence 321 111 22 4567899999999999975 489999999999999865 21 00
Q ss_pred --------cccEEEccCCccccCcccHHHHHHH-HHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 141 --------THNITLSQEDTLFGGQVSNLQVAEL-LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 141 --------~~~i~~~~~~~~~~~~Is~~DVA~a-i~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+.+..++...+.+|+++|||++ ++.+++++. .+ +|||++++. +++.|+++.+.+..|.+
T Consensus 237 ~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~---~s~~e~~~~i~~~~g~~ 307 (377)
T 2q1s_A 237 TFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKE---TSIADLATKINEITGNN 307 (377)
T ss_dssp HHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCC---EEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCc---eeHHHHHHHHHHHhCCC
Confidence 0112222333445679999999999 999998765 35 999999874 99999999999998864
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-19 Score=167.68 Aligned_cols=171 Identities=15% Similarity=0.079 Sum_probs=136.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHh--CCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI--AKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~--agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|+.|.+ +.++|+||||++..... ...+.+|++++++ .+++||||+||.++++..
T Consensus 47 ~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~-----------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~ 110 (286)
T 3ius_A 47 SGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG-----------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDH 110 (286)
T ss_dssp TTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB-----------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCC
T ss_pred CCCeEEEecccccc-----cCCCCEEEECCCccccc-----------cHHHHHHHHHHHhhcCCceEEEEeecceecCCC
Confidence 68999999999954 88999999999975432 1246889999998 789999999999887543
Q ss_pred C-----chhhcccchHHHHHHHHHHHHHHHC-CCCEEEEEcCccCCCCCCccC----cccEEEccCCccccCcccHHHHH
Q 015570 94 F-----PAAILNLFWGVLLWKRKAEEALIAS-GLPYTIVRPGGMERPTDAYKE----THNITLSQEDTLFGGQVSNLQVA 163 (404)
Q Consensus 94 ~-----~~~~~~~~~~y~~sK~~~E~~l~~~-gl~~tIlRpg~~~G~~~~~~~----~~~i~~~~~~~~~~~~Is~~DVA 163 (404)
. +.....+...|+.+|+.+|++++.. |+++++||++++||++..... ...+.+..+ ...+.+||++|+|
T Consensus 111 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva 189 (286)
T 3ius_A 111 DGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKP-GQVFSRIHVEDIA 189 (286)
T ss_dssp TTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECT-TCCBCEEEHHHHH
T ss_pred CCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHHHhcCCccccCCC-CcccceEEHHHHH
Confidence 2 1224455678999999999999997 999999999999998653211 122333333 3456899999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 164 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 164 ~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
++++.+++++. .+++|||++++. +++.|+++.+.+..|.+
T Consensus 190 ~a~~~~~~~~~--~g~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 229 (286)
T 3ius_A 190 QVLAASMARPD--PGAVYNVCDDEP---VPPQDVIAYAAELQGLP 229 (286)
T ss_dssp HHHHHHHHSCC--TTCEEEECCSCC---BCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCC--CCCEEEEeCCCC---ccHHHHHHHHHHHcCCC
Confidence 99999999877 478999999875 99999999999998854
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=176.87 Aligned_cols=192 Identities=14% Similarity=0.066 Sum_probs=147.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCC-EEEEeccCccc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTN 90 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVk-rfI~vSS~gv~ 90 (404)
.+++++.+|+.|.+.+.+++++ +|+||||||..... ..++...+++|+.++.+|+++|.+.+++ ||||+||.+++
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~ 129 (347)
T 1orr_A 50 GNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVY 129 (347)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGG
T ss_pred CceEEEEcCCCCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHh
Confidence 4689999999999999999988 99999999975321 1245567889999999999999999886 99999999876
Q ss_pred CCCC---------------------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-----
Q 015570 91 KFGF---------------------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE----- 140 (404)
Q Consensus 91 ~~~~---------------------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~----- 140 (404)
+... +.....+...|+.+|..+|++++. .|+++++|||+++||++.....
T Consensus 130 g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~ 209 (347)
T 1orr_A 130 GDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWV 209 (347)
T ss_dssp TTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHH
T ss_pred CCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHH
Confidence 5321 111234567899999999999975 4899999999999998642110
Q ss_pred ---------cc-----cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 141 ---------TH-----NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 141 ---------~~-----~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.. .+.+.+++...+.+|+++|||++++.++.+.....+++|||.++.. ..+++.|+++.+.+..|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~-~~~s~~e~~~~i~~~~g 288 (347)
T 1orr_A 210 GWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIV-NSLSLLELFKLLEDYCN 288 (347)
T ss_dssp HHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGG-GEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCC-CCccHHHHHHHHHHHhC
Confidence 01 2334444555567999999999999999863223478999998740 12799999999999888
Q ss_pred CC
Q 015570 207 EP 208 (404)
Q Consensus 207 ~~ 208 (404)
..
T Consensus 289 ~~ 290 (347)
T 1orr_A 289 ID 290 (347)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=179.38 Aligned_cols=188 Identities=13% Similarity=-0.011 Sum_probs=144.1
Q ss_pred eEEEEcCCCCHhhHHHHhC--C-CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 18 LELVECDLEKRVQIEPALG--N-ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~--g-vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
++++.+|+.|.+.+..+++ + +|+||||||..... ..++...+++|+.++.+|+++|++.+++||||+||.++++.
T Consensus 71 ~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~ 150 (397)
T 1gy8_A 71 AALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGN 150 (397)
T ss_dssp CEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBS
T ss_pred EEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCC
Confidence 9999999999999999987 6 99999999976421 23455678899999999999999999999999999887643
Q ss_pred CC------------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCC---------ccC-------
Q 015570 93 GF------------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDA---------YKE------- 140 (404)
Q Consensus 93 ~~------------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~---------~~~------- 140 (404)
.. +.....+...|+.+|..+|++++. .|+++++|||+++||++.. ...
T Consensus 151 ~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 230 (397)
T 1gy8_A 151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG 230 (397)
T ss_dssp CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred CCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHH
Confidence 22 111234467899999999999875 4899999999999997521 000
Q ss_pred -------cc-------------cEEEcc------CCccccCcccHHHHHHHHHHHHhCCCCCC----C---cEEEEEcCC
Q 015570 141 -------TH-------------NITLSQ------EDTLFGGQVSNLQVAELLACMAKNRSLSY----C---KVVEVIAET 187 (404)
Q Consensus 141 -------~~-------------~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~~~~----~---~i~nI~~~~ 187 (404)
.+ .+.+.+ ++...+.+|+++|||++++.++++..... + ++|||++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~ 310 (397)
T 1gy8_A 231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSR 310 (397)
T ss_dssp HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSC
T ss_pred HHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCC
Confidence 00 122222 23445579999999999999997643111 3 899999887
Q ss_pred CCCCccHHHHHHHcccccCCC
Q 015570 188 TAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 188 ~~~~~si~ell~~i~~~~g~~ 208 (404)
. +++.|+++.|.+..|.+
T Consensus 311 ~---~s~~e~~~~i~~~~g~~ 328 (397)
T 1gy8_A 311 G---YSVREVIEVARKTTGHP 328 (397)
T ss_dssp C---EEHHHHHHHHHHHHCCC
T ss_pred c---ccHHHHHHHHHHHhCCC
Confidence 5 89999999999988853
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-19 Score=173.22 Aligned_cols=187 Identities=10% Similarity=-0.107 Sum_probs=146.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCC-CEEEEeccCccc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTN 90 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agV-krfI~vSS~gv~ 90 (404)
.+++++.+|+.|.+.+.+++++ +|+||||||..... ..++...+++|+.++.+|+++|++.++ +||||+||.+++
T Consensus 63 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~ 142 (335)
T 1rpn_A 63 GDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMF 142 (335)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGG
T ss_pred CceEEEECCCCCHHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHh
Confidence 5789999999999999999985 69999999975421 234556678999999999999999986 899999999886
Q ss_pred CCCC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-------------cc--cEEE
Q 015570 91 KFGF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------TH--NITL 146 (404)
Q Consensus 91 ~~~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-------------~~--~i~~ 146 (404)
+... +.....+...|+.+|..+|++++. .|++++++|++.+||++..... .+ ....
T Consensus 143 g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~ 222 (335)
T 1rpn_A 143 GLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELR 222 (335)
T ss_dssp CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEE
T ss_pred CCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEE
Confidence 5421 122344567899999999999975 4899999999999997543110 01 1122
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+++...+.+|+++|+|++++.+++++. +++|||++++. +++.|+++.+.+..|.+
T Consensus 223 ~g~g~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 223 LGNVDAKRDWGFAGDYVEAMWLMLQQDK---ADDYVVATGVT---TTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp ESCTTCEEECEEHHHHHHHHHHHHHSSS---CCCEEECCSCE---EEHHHHHHHHHHTTTCC
T ss_pred eCCCcceeceEEHHHHHHHHHHHHhcCC---CCEEEEeCCCC---ccHHHHHHHHHHHhCCC
Confidence 2334455679999999999999998765 48999998875 99999999999999864
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-19 Score=174.51 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=145.0
Q ss_pred CCCeEEEEcCCCCH-hhHHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 15 VEMLELVECDLEKR-VQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 15 ~~gveiV~gDl~d~-~~l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
..+++++.+|+.|. +.+.++++++|+||||||..... ..++...+++|+.++.+|+++|++.+ +||||+||.++++
T Consensus 44 ~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g 122 (345)
T 2bll_A 44 HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYG 122 (345)
T ss_dssp CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGB
T ss_pred CCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcC
Confidence 46899999999984 56888899999999999975421 12445567899999999999999998 8999999998865
Q ss_pred CCCc-----hhh-------cccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc----------------
Q 015570 92 FGFP-----AAI-------LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------- 139 (404)
Q Consensus 92 ~~~~-----~~~-------~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~---------------- 139 (404)
.... ... ..+.+.|+.+|..+|++++. .|+++++|||+++||++....
T Consensus 123 ~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~ 202 (345)
T 2bll_A 123 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL 202 (345)
T ss_dssp TCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHH
T ss_pred CCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHH
Confidence 3211 110 12445899999999999863 589999999999999865310
Q ss_pred ---CcccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC-CCCCccHHHHHHHcccccCCC
Q 015570 140 ---ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 140 ---~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~-~~~~~si~ell~~i~~~~g~~ 208 (404)
....+.+..++...+.+|+++|||++++.++++.. ...+++|||++++ . +++.|+++.+.+..|..
T Consensus 203 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~---~s~~e~~~~i~~~~g~~ 273 (345)
T 2bll_A 203 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENE---ASIEELGEMLLASFEKH 273 (345)
T ss_dssp HHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSE---EEHHHHHHHHHHHHHTC
T ss_pred HHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCC---CCHHHHHHHHHHHhCCC
Confidence 01123344444455679999999999999998753 1347899999874 4 89999999999888754
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.1e-19 Score=173.16 Aligned_cols=190 Identities=12% Similarity=0.056 Sum_probs=144.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++.+|+.|.+.+.++++ ++|+||||||.... ...++...+++|+.++.+|+++|++.+++||||+||.++++
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 58 RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG 137 (348)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred CceEEEECCCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 478999999999999999998 89999999997532 12344567889999999999999999999999999998865
Q ss_pred CCC-----chhhccc-chHHHHHHHHHHHHHHH---CC--CCEEEEEcCccCCCCC------Cc----c-----------
Q 015570 92 FGF-----PAAILNL-FWGVLLWKRKAEEALIA---SG--LPYTIVRPGGMERPTD------AY----K----------- 139 (404)
Q Consensus 92 ~~~-----~~~~~~~-~~~y~~sK~~~E~~l~~---~g--l~~tIlRpg~~~G~~~------~~----~----------- 139 (404)
... +.....+ ...|+.+|..+|++++. .+ +++++||++++||+.. .. .
T Consensus 138 ~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~ 217 (348)
T 1ek6_A 138 NPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAI 217 (348)
T ss_dssp SCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHH
Confidence 321 1112234 67899999999999875 24 9999999999998742 00 0
Q ss_pred -CcccEEEcc------CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 140 -ETHNITLSQ------EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 140 -~~~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
....+.+.+ .+...+.+|+++|||++++.++++.. ..++++|||++++. +++.|+++.+.+..|.+
T Consensus 218 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 218 GRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG---YSVLQMVQAMEKASGKK 291 (348)
T ss_dssp TSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC---EEHHHHHHHHHHHHCSC
T ss_pred hcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCC---ccHHHHHHHHHHHhCCC
Confidence 011123322 23445679999999999999997652 22248999998875 99999999999988853
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.1e-19 Score=169.41 Aligned_cols=177 Identities=13% Similarity=0.052 Sum_probs=142.9
Q ss_pred cCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC-----
Q 015570 23 CDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----- 93 (404)
Q Consensus 23 gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~----- 93 (404)
+|+.|.+.+.++++ ++|+||||++..... ..++...+++|+.++.+|+++|++.|+ ||||+||.++++..
T Consensus 40 ~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~ 118 (287)
T 3sc6_A 40 LDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGY 118 (287)
T ss_dssp SCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCB
T ss_pred cCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCC
Confidence 69999999999998 799999999986432 245667789999999999999999998 79999999886532
Q ss_pred CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc---------CcccEEEccCCccccCcccHHHHHH
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVAE 164 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~---------~~~~i~~~~~~~~~~~~Is~~DVA~ 164 (404)
.+.....+...|+.+|..+|++++..+.++++||++++||++.... ....+.+.+ ...+.+|+++|+|+
T Consensus 119 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~ 196 (287)
T 3sc6_A 119 DEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNV 196 (287)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHH
Confidence 1222345677999999999999999888999999999999754321 112233332 25568999999999
Q ss_pred HHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 165 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 165 ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+++.+++++. +++||+++++. +++.|+++.+.+..|..
T Consensus 197 ~~~~~~~~~~---~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 234 (287)
T 3sc6_A 197 MINKLIHTSL---YGTYHVSNTGS---CSWFEFAKKIFSYANMK 234 (287)
T ss_dssp HHHHHHTSCC---CEEEECCCBSC---EEHHHHHHHHHHHHTCC
T ss_pred HHHHHHhCCC---CCeEEEcCCCc---ccHHHHHHHHHHHcCCC
Confidence 9999998876 67999999875 99999999999999854
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.5e-19 Score=171.58 Aligned_cols=183 Identities=12% Similarity=0.027 Sum_probs=143.0
Q ss_pred cCCCCHhhHHHHhC--CCCEEEEcCcCCCC---CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC---
Q 015570 23 CDLEKRVQIEPALG--NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF--- 94 (404)
Q Consensus 23 gDl~d~~~l~~aL~--gvDvVI~~ag~~~~---~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~--- 94 (404)
+|+.|.+.+.++++ ++|+||||++.... ...++...+++|+.++.+|+++|++.+++||||+||.++++...
T Consensus 39 ~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~ 118 (321)
T 1e6u_A 39 LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP 118 (321)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS
T ss_pred CCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCC
Confidence 69999999999998 99999999997641 12344566789999999999999999999999999998865321
Q ss_pred --chh----hccc-chHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc----C----------c------cc
Q 015570 95 --PAA----ILNL-FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK----E----------T------HN 143 (404)
Q Consensus 95 --~~~----~~~~-~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~----~----------~------~~ 143 (404)
+.. ...+ ...|+.+|..+|++++. .|+++++||++++||++.... . . ..
T Consensus 119 ~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 198 (321)
T 1e6u_A 119 MAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPD 198 (321)
T ss_dssp BCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSE
T ss_pred cCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCc
Confidence 111 2233 25899999999999976 589999999999999865421 0 0 13
Q ss_pred EEEccCCccccCcccHHHHHHHHHHHHhCCCCC-------CCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 144 ITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS-------YCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 144 i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~-------~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+.+...+...+.+|+++|+|++++.++++.... .+++|||++++. +++.|+++.+.+..|.+
T Consensus 199 ~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 267 (321)
T 1e6u_A 199 VVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD---CTIRELAQTIAKVVGYK 267 (321)
T ss_dssp EEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC---EEHHHHHHHHHHHHTCC
T ss_pred eEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC---ccHHHHHHHHHHHhCCC
Confidence 344445556678999999999999999876521 258999998875 99999999999988854
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.9e-19 Score=172.27 Aligned_cols=183 Identities=15% Similarity=0.112 Sum_probs=144.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC-CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~-~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
.+++++.+|+.|.+.+.++++ ++|+||||||..... ..++. +++|+.++.+|+++|.+.+++||||+||.++++.
T Consensus 65 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~ 142 (330)
T 2pzm_A 65 AGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGR 142 (330)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCS
T ss_pred CCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCC
Confidence 589999999999999999998 999999999976431 11222 7899999999999999999999999999988653
Q ss_pred CC----chhhc-ccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccC---------cccEEEccCCccccCccc
Q 015570 93 GF----PAAIL-NLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE---------THNITLSQEDTLFGGQVS 158 (404)
Q Consensus 93 ~~----~~~~~-~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~---------~~~i~~~~~~~~~~~~Is 158 (404)
.. +.+.. .+...|+.+|..+|++++..++.+++||++++||++..... .+. .+...+. .+.+++
T Consensus 143 ~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~ 220 (330)
T 2pzm_A 143 PATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLD 220 (330)
T ss_dssp CSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEE
T ss_pred CccCCCCcCCCCCCCChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-Eeccee
Confidence 21 10000 25678999999999999988999999999999998752100 011 1122223 567899
Q ss_pred HHHHHH-HHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 159 NLQVAE-LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 159 ~~DVA~-ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
++|||+ +++.++.+.. +++|||.++.. +++.|+++.+.+..|..
T Consensus 221 ~~Dva~~a~~~~~~~~~---g~~~~v~~~~~---~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 221 MSDFLAIADLSLQEGRP---TGVFNVSTGEG---HSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp HHHHHHHHHHHTSTTCC---CEEEEESCSCC---EEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhhcCC---CCEEEeCCCCC---CCHHHHHHHHHHHhCCC
Confidence 999999 9999998743 88999998874 89999999999988864
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.7e-19 Score=166.99 Aligned_cols=169 Identities=17% Similarity=0.141 Sum_probs=133.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.+++.++++++|+||||++... ..|+.++.+++++|++.|++||||+||.+++..
T Consensus 44 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~--- 110 (286)
T 2zcu_A 44 QGITVRQADYGDEAALTSALQGVEKLLLISSSEV----------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS--- 110 (286)
T ss_dssp TTCEEEECCTTCHHHHHHHTTTCSEEEECC------------------CHHHHHHHHHHHHTCCEEEEEEETTTTTC---
T ss_pred CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc----------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---
Confidence 4789999999999999999999999999998531 146789999999999999999999999987621
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCc----cCcccEEEccCCccccCcccHHHHHHHHHHHHh
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY----KETHNITLSQEDTLFGGQVSNLQVAELLACMAK 171 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~----~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~ 171 (404)
...|+.+|..+|++++..|+++++|||+++++..... ...+.+.+ ..+.....+++++|||++++.++.
T Consensus 111 ------~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~~~ 183 (286)
T 2zcu_A 111 ------PLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIG-AAGDGKIASATRADYAAAAARVIS 183 (286)
T ss_dssp ------CSTTHHHHHHHHHHHHHHCSEEEEEEECCBHHHHHTTHHHHHHHTEEEE-SCTTCCBCCBCHHHHHHHHHHHHH
T ss_pred ------cchhHHHHHHHHHHHHHcCCCeEEEeChHHhhhhHHHhHHhhcCCceec-cCCCCccccccHHHHHHHHHHHhc
Confidence 1368999999999999999999999999887642211 01122332 233445679999999999999998
Q ss_pred CCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 172 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 172 ~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
++. ..+++|+|.+++. +++.|+++.+.+.+|.+
T Consensus 184 ~~~-~~g~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 184 EAG-HEGKVYELAGDSA---WTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp SSS-CTTCEEEECCSSC---BCHHHHHHHHHHHHSSC
T ss_pred CCC-CCCceEEEeCCCc---CCHHHHHHHHHHHHCCC
Confidence 865 4588999999864 89999999999998854
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=174.15 Aligned_cols=187 Identities=12% Similarity=0.015 Sum_probs=142.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCC---cchhhHHHHHHHHHHHHHhCCC-CEEEEeccC
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDIT---GPYRIDFQATKNLVDAATIAKV-NHFIMVSSL 87 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~---~~~~vnv~~~~~Ll~Aa~~agV-krfI~vSS~ 87 (404)
.+++++.+|+.|.+.+.+++++ +|+||||||..... ..+.. ..+++|+.++.+|+++|++.++ +||||+||.
T Consensus 77 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~ 156 (404)
T 1i24_A 77 KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTM 156 (404)
T ss_dssp CCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCG
T ss_pred CceEEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcH
Confidence 5789999999999999999987 99999999975321 11211 2568899999999999999888 599999999
Q ss_pred cccCCCCc---h---------------hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc------
Q 015570 88 GTNKFGFP---A---------------AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK------ 139 (404)
Q Consensus 88 gv~~~~~~---~---------------~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~------ 139 (404)
++++.... + ....+...|+.+|..+|++++. .|+++++|||+++||++....
T Consensus 157 ~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~ 236 (404)
T 1i24_A 157 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEEL 236 (404)
T ss_dssp GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGG
T ss_pred HHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccc
Confidence 88653210 0 1233457899999999998864 489999999999999865210
Q ss_pred ----------------------CcccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCC--cEEEEEcCCCCCCccHH
Q 015570 140 ----------------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYC--KVVEVIAETTAPLTPME 195 (404)
Q Consensus 140 ----------------------~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~--~i~nI~~~~~~~~~si~ 195 (404)
....+.+.+++...+++|+++|||++++.++++.. ..+ ++|||++ +. +++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~yni~~-~~---~s~~ 311 (404)
T 1i24_A 237 RNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFT-EQ---FSVN 311 (404)
T ss_dssp CCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECS-EE---EEHH
T ss_pred ccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc-cCCCceEEEECC-CC---CcHH
Confidence 01123344445556689999999999999998765 234 7999988 43 8999
Q ss_pred HHHHHcccc---cCC
Q 015570 196 ELLAKIPSQ---RAE 207 (404)
Q Consensus 196 ell~~i~~~---~g~ 207 (404)
|+++.+.+. +|.
T Consensus 312 e~~~~i~~~~~~~g~ 326 (404)
T 1i24_A 312 ELASLVTKAGSKLGL 326 (404)
T ss_dssp HHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHhhCC
Confidence 999999886 564
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=171.58 Aligned_cols=174 Identities=14% Similarity=0.137 Sum_probs=139.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKF 92 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~ 92 (404)
.+++++.+|+.|.+++.++|+ ++|+||||++.. |+.++.+|+++|+++| ++|||+ |+.+...
T Consensus 60 ~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~-------------n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~- 124 (346)
T 3i6i_A 60 KGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGE-------------SILDQIALVKAMKAVGTIKRFLP-SEFGHDV- 124 (346)
T ss_dssp TTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCGG-------------GGGGHHHHHHHHHHHCCCSEEEC-SCCSSCT-
T ss_pred CCcEEEEeecCCHHHHHHHHhhCCCCEEEECCchh-------------hHHHHHHHHHHHHHcCCceEEee-cccCCCC-
Confidence 689999999999999999999 999999999862 5678899999999999 999986 6555421
Q ss_pred CCchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc--------CcccEEEccCCccccCcccHHHHHH
Q 015570 93 GFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAE 164 (404)
Q Consensus 93 ~~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~--------~~~~i~~~~~~~~~~~~Is~~DVA~ 164 (404)
.......+...|+.+|+.+|+++++.|++|++||+|+|+|...... ..+.+.+.+++.....+|+++|||+
T Consensus 125 -~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~ 203 (346)
T 3i6i_A 125 -NRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGK 203 (346)
T ss_dssp -TTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHH
T ss_pred -CccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHH
Confidence 1122235567899999999999999999999999999998542110 2234555555666677999999999
Q ss_pred HHHHHHhCCCCCCCcEEEEEc-CCCCCCccHHHHHHHcccccCCCC
Q 015570 165 LLACMAKNRSLSYCKVVEVIA-ETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 165 ai~~~l~~~~~~~~~i~nI~~-~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+++.++.++. ..+++|++.+ ++. +++.|+++.+.+.+|.+.
T Consensus 204 ~~~~~l~~~~-~~~~~~~i~g~~~~---~s~~e~~~~~~~~~g~~~ 245 (346)
T 3i6i_A 204 FTMKTVDDVR-TLNKSVHFRPSCNC---LNINELASVWEKKIGRTL 245 (346)
T ss_dssp HHHHHTTCGG-GTTEEEECCCGGGE---ECHHHHHHHHHHHHTSCC
T ss_pred HHHHHHhCcc-ccCeEEEEeCCCCC---CCHHHHHHHHHHHHCCCC
Confidence 9999999876 5688999984 243 999999999999998653
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.7e-19 Score=174.37 Aligned_cols=191 Identities=12% Similarity=0.062 Sum_probs=144.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCccc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTN 90 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~ 90 (404)
.+++++.+|+.|.+.+..++++ +|+||||||.... ...++...+++|+.++.+|+++|.+.+ ++||||+||.+++
T Consensus 57 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vy 136 (357)
T 1rkx_A 57 DGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY 136 (357)
T ss_dssp TTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGB
T ss_pred CceEEEEccccCHHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHh
Confidence 5789999999999999999986 8999999996421 123445667899999999999999886 8999999999886
Q ss_pred CCCC------chhhcccchHHHHHHHHHHHHHHHC-------------CCCEEEEEcCccCCCCCCcc------------
Q 015570 91 KFGF------PAAILNLFWGVLLWKRKAEEALIAS-------------GLPYTIVRPGGMERPTDAYK------------ 139 (404)
Q Consensus 91 ~~~~------~~~~~~~~~~y~~sK~~~E~~l~~~-------------gl~~tIlRpg~~~G~~~~~~------------ 139 (404)
+... +.....+...|+.+|..+|++++.. |+++++|||+++||+++...
T Consensus 137 g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~ 216 (357)
T 1rkx_A 137 DNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFE 216 (357)
T ss_dssp CCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHh
Confidence 5332 1113345678999999999998752 99999999999999865311
Q ss_pred CcccEEEccCCccccCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 140 ETHNITLSQEDTLFGGQVSNLQVAELLACMAKN---RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 140 ~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~---~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
....+.+. ++...+.+|+++|||++++.++.+ .....+++|||++++. ..+++.|+++.+.+..|.+
T Consensus 217 ~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~-~~~s~~e~~~~i~~~~g~~ 286 (357)
T 1rkx_A 217 QSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDA-DATPVKNIVEQMVKYWGEG 286 (357)
T ss_dssp TTCCEECS-CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGG-GCEEHHHHHHHHHHHHCTT
T ss_pred cCCCEEEC-CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCC-CcccHHHHHHHHHHHhCCC
Confidence 01122332 334456799999999999998874 2123478999997410 1389999999999988854
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.5e-19 Score=169.37 Aligned_cols=186 Identities=16% Similarity=0.074 Sum_probs=144.0
Q ss_pred CeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC-CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 17 MLELVECDLEKRVQIEPALG--NASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~-~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
+++++.+|+.|.+.+.++++ ++|+||||++.... ...++...+++|+.++.+|+++|++.+++||||+||.++++..
T Consensus 40 ~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~ 119 (317)
T 3ajr_A 40 GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPE 119 (317)
T ss_dssp TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTT
T ss_pred CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCC
Confidence 68899999999999999998 99999999997531 1234456678999999999999999999999999999886542
Q ss_pred C------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc---------------CcccEEEcc
Q 015570 94 F------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQ 148 (404)
Q Consensus 94 ~------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~---------------~~~~i~~~~ 148 (404)
. +.....+...|+.+|..+|++++. .|+++++||++++||+..... ..+.+....
T Consensus 120 ~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (317)
T 3ajr_A 120 TPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYL 199 (317)
T ss_dssp SCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECS
T ss_pred CCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeec
Confidence 1 112234567899999999998864 589999999999999542110 112233333
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCCCC--CCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRSLS--YCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~~~--~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+....++|+++|+|++++.+++++... .+++|||+++. +++.|+++.+.+..|
T Consensus 200 ~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~~----~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 200 APNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYT----FTPSELYSKIKERIP 255 (317)
T ss_dssp CTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSEE----ECHHHHHHHHHTTCC
T ss_pred CccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCCcc----ccHHHHHHHHHHHCC
Confidence 4444567899999999999999876422 25899998743 899999999998877
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=166.23 Aligned_cols=174 Identities=17% Similarity=0.147 Sum_probs=135.6
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+++++.+|+.|.+.+..+++++|+||||++.... ...|+.++++|+++|+++|++||||+||.+.....
T Consensus 43 ~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~- 113 (289)
T 3e48_A 43 RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP--------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN- 113 (289)
T ss_dssp BTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS--------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC-
T ss_pred hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc--------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC-
Confidence 368999999999999999999999999999986532 24578999999999999999999999997653221
Q ss_pred chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccC---cccEEEccCCccccCcccHHHHHHHHHHHHh
Q 015570 95 PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE---THNITLSQEDTLFGGQVSNLQVAELLACMAK 171 (404)
Q Consensus 95 ~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~---~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~ 171 (404)
+ ..+...+..+|+++++.|++|++|||++|||+...+.. .........+.....+|+++|||++++.++.
T Consensus 114 ~-------~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~ 186 (289)
T 3e48_A 114 P-------FHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIK 186 (289)
T ss_dssp C-------STTHHHHHHHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHH
T ss_pred C-------CccchhHHHHHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHc
Confidence 1 11234455788889999999999999999986432110 1112222233444568999999999999999
Q ss_pred CCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 172 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 172 ~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
++. ..+++|+|. ++. +++.|+++.+.+.+|.+.
T Consensus 187 ~~~-~~g~~~~~~-~~~---~s~~e~~~~~~~~~g~~~ 219 (289)
T 3e48_A 187 NPD-TWGKRYLLS-GYS---YDMKELAAILSEASGTEI 219 (289)
T ss_dssp CGG-GTTCEEEEC-CEE---EEHHHHHHHHHHHHTSCC
T ss_pred CCC-cCCceEEeC-CCc---CCHHHHHHHHHHHHCCce
Confidence 876 348899999 764 999999999999998653
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-19 Score=173.20 Aligned_cols=181 Identities=11% Similarity=-0.008 Sum_probs=144.0
Q ss_pred EEcCCCCHhhHHHHhC-----CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC--
Q 015570 21 VECDLEKRVQIEPALG-----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-- 93 (404)
Q Consensus 21 V~gDl~d~~~l~~aL~-----gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~-- 93 (404)
+.+|+.|.+.+..+++ ++|+||||||.......++...+++|+.++.+|+++|.+.++ ||||+||.++++..
T Consensus 94 ~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~ 172 (357)
T 2x6t_A 94 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTS 172 (357)
T ss_dssp CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSS
T ss_pred EeeecCcHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCC
Confidence 7789999999998887 599999999986543445566788999999999999999999 99999999886532
Q ss_pred ---CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc---------------CcccEEEccCCc
Q 015570 94 ---FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQEDT 151 (404)
Q Consensus 94 ---~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~---------------~~~~i~~~~~~~ 151 (404)
.+.....+...|+.+|..+|++++. .|+++++||++++||++.... ....+.+..++.
T Consensus 173 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (357)
T 2x6t_A 173 DFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSE 252 (357)
T ss_dssp CCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGG
T ss_pred CCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCC
Confidence 1222344567899999999999975 489999999999999865310 011223333444
Q ss_pred c-ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 152 L-FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 152 ~-~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
. .+.+|+++|||++++.++++.. +++|||++++. +++.|+++.+.+..|.+
T Consensus 253 ~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 253 NFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRA---ESFQAVADATLAYHKKG 304 (357)
T ss_dssp GCEECEEEHHHHHHHHHHHHHHCC---CEEEEESCSCC---EEHHHHHHHHHHHHTCC
T ss_pred cceEccEEHHHHHHHHHHHHhcCC---CCeEEecCCCc---ccHHHHHHHHHHHcCCC
Confidence 4 6688999999999999998765 78999998874 99999999999998865
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.5e-18 Score=151.37 Aligned_cols=161 Identities=14% Similarity=0.090 Sum_probs=126.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+++++.+|+.|.+.+.++++++|+||||+|.... ....++|+.++.+++++|++.+++|||++||.+++....
T Consensus 45 ~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~-----~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~ 119 (206)
T 1hdo_A 45 PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-----LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT 119 (206)
T ss_dssp CCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC-----CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTT
T ss_pred CCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC-----CCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcc
Confidence 468999999999999999999999999999997543 123468999999999999999999999999998865432
Q ss_pred chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 95 PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 95 ~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
. .......|+.+|..+|++++..|++|++|||++|+. +.. ...+.....+...+.+++++|+|++++.+++++.
T Consensus 120 ~--~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~~~-~~~---~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 193 (206)
T 1hdo_A 120 K--VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGD-QPL---TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE 193 (206)
T ss_dssp C--SCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEEC-CCC---CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred c--ccccchhHHHHHHHHHHHHHhCCCCEEEEeCCcccC-CCC---CcceEecccCCCCCCccCHHHHHHHHHHHhcCcc
Confidence 1 111457899999999999999999999999999842 221 1112111111111578999999999999998876
Q ss_pred CCCCcEEEEEcCC
Q 015570 175 LSYCKVVEVIAET 187 (404)
Q Consensus 175 ~~~~~i~nI~~~~ 187 (404)
..+++|+|.++.
T Consensus 194 -~~g~~~~i~~g~ 205 (206)
T 1hdo_A 194 -YDGHSTYPSHQY 205 (206)
T ss_dssp -TTTCEEEEECCC
T ss_pred -ccccceeeeccc
Confidence 568999999874
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=170.00 Aligned_cols=182 Identities=13% Similarity=0.059 Sum_probs=141.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC-CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC-
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK- 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~-~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~- 91 (404)
.+++++.+|+.|.+.+.+++++ +|+||||||..... ..++. +++|+.++.+|+++|.+.+++||||+||.++++
T Consensus 66 ~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~ 143 (333)
T 2q1w_A 66 PNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGV 143 (333)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCS
T ss_pred CCceEEEEeCCCHHHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCC
Confidence 5899999999999999999988 99999999976431 11222 788999999999999999999999999998875
Q ss_pred ---CCCc-hhhc-ccc-hHHHHHHHHHHHHHHH-CCCCEEEEEcCccCCCCCCccC---------cccEEEccCCccccC
Q 015570 92 ---FGFP-AAIL-NLF-WGVLLWKRKAEEALIA-SGLPYTIVRPGGMERPTDAYKE---------THNITLSQEDTLFGG 155 (404)
Q Consensus 92 ---~~~~-~~~~-~~~-~~y~~sK~~~E~~l~~-~gl~~tIlRpg~~~G~~~~~~~---------~~~i~~~~~~~~~~~ 155 (404)
.... .+.. .+. ..|+.+|..+|++++. .. ++++||++++||++..... .+. .+.. +...+.
T Consensus 144 ~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 220 (333)
T 2q1w_A 144 KPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK-KCFV-TKARRD 220 (333)
T ss_dssp CCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC-CCEE-EECEEC
T ss_pred CcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC-eeeC-CCceEe
Confidence 2110 0000 344 6899999999999998 66 9999999999998631000 011 1111 233457
Q ss_pred cccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 156 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 156 ~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+++++|||++++.++.++. +++|||.++.. +++.|+++.+.+..|..
T Consensus 221 ~i~v~Dva~ai~~~~~~~~---g~~~~v~~~~~---~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 221 FVFVKDLARATVRAVDGVG---HGAYHFSSGTD---VAIKELYDAVVEAMALP 267 (333)
T ss_dssp EEEHHHHHHHHHHHHTTCC---CEEEECSCSCC---EEHHHHHHHHHHHTTCS
T ss_pred eEEHHHHHHHHHHHHhcCC---CCEEEeCCCCC---ccHHHHHHHHHHHhCCC
Confidence 8999999999999998765 78999998875 99999999999998864
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.77 E-value=5.4e-19 Score=169.90 Aligned_cols=180 Identities=17% Similarity=0.050 Sum_probs=138.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.+++..+++++|+||||++..... ....++.++.+++++|++.|++|||++|+.+++....
T Consensus 51 ~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~- 123 (299)
T 2wm3_A 51 QGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESC------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA- 123 (299)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHHHT------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT-
T ss_pred CCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCccc------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC-
Confidence 478999999999999999999999999999853210 2456788999999999999999999988877653211
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCc-c----Ccc-cEEEcc-CCccccCcccHHHHHHHHHH
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY-K----ETH-NITLSQ-EDTLFGGQVSNLQVAELLAC 168 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~-~----~~~-~i~~~~-~~~~~~~~Is~~DVA~ai~~ 168 (404)
......|+.+|..+|++++..|++|++|||++|||+.... . ..+ .+.+.. .+.....+|+++|||++++.
T Consensus 124 ---~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 200 (299)
T 2wm3_A 124 ---GRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLS 200 (299)
T ss_dssp ---TSCCCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHH
T ss_pred ---CcccCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHH
Confidence 0123578999999999999999999999999999863321 0 111 111111 13334568999999999999
Q ss_pred HHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 169 MAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 169 ~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
++.++..+.+++|++.++. +++.|+++.+.+.+|.+.
T Consensus 201 ~l~~~~~~~g~~~~~~g~~----~s~~e~~~~~~~~~g~~~ 237 (299)
T 2wm3_A 201 LLKMPEKYVGQNIGLSTCR----HTAEEYAALLTKHTRKVV 237 (299)
T ss_dssp HHHSHHHHTTCEEECCSEE----ECHHHHHHHHHHHHSSCE
T ss_pred HHcChhhhCCeEEEeeecc----CCHHHHHHHHHHHHCCCc
Confidence 9987532357899998753 999999999999998654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.6e-18 Score=173.79 Aligned_cols=181 Identities=16% Similarity=0.110 Sum_probs=136.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC--
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-- 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~-- 93 (404)
.+++++.+|+.|.+.+. ++.++|+||||||.... ..++...+++|+.++.+|+++|.+ ++++|||+||.++ +..
T Consensus 130 ~~v~~v~~Dl~d~~~l~-~~~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~ 205 (427)
T 4f6c_A 130 SNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFD 205 (427)
T ss_dssp TTEEEEEECC---CCCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEEC
T ss_pred CceEEEeCCCCCcccCC-CcCCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCcc
Confidence 68999999999988887 78899999999997642 346677889999999999999999 8899999999988 211
Q ss_pred --------Cchhh---cccchHHHHHHHHHHHHHHH---CCCCEEEEEcCccCCCCCCcc---C--------------cc
Q 015570 94 --------FPAAI---LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYK---E--------------TH 142 (404)
Q Consensus 94 --------~~~~~---~~~~~~y~~sK~~~E~~l~~---~gl~~tIlRpg~~~G~~~~~~---~--------------~~ 142 (404)
.+... ..+...|+.+|+.+|++++. .|+++++||||+|||+..... . ..
T Consensus 206 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (427)
T 4f6c_A 206 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQL 285 (427)
T ss_dssp SSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHS
T ss_pred CCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhc
Confidence 01111 23667999999999999987 799999999999999765321 0 00
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.......+...+.+++++|+|++++.++.+.. .+++|||.+++. ++|.|+++.+.+ .|
T Consensus 286 ~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~---~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 286 DCIGVSMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNK---MPVKSLLECVKR-KE 343 (427)
T ss_dssp SEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC--CCSEEEESCSCC---EEHHHHHHHHHS-SC
T ss_pred CCCCCccccceEEEeeHHHHHHHHHHHHcCCC--CCCEEEecCCCC---CcHHHHHHHHHH-cC
Confidence 11111112344579999999999999998876 589999999875 999999999987 44
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-18 Score=168.36 Aligned_cols=184 Identities=13% Similarity=0.069 Sum_probs=122.3
Q ss_pred EEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC--
Q 015570 20 LVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-- 93 (404)
Q Consensus 20 iV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~-- 93 (404)
++.+|+.|.+.+.+++++ +|+||||+|..... ..++...+++|+.++.+|+++|.+.++ ||||+||.++++..
T Consensus 41 ~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~ 119 (315)
T 2ydy_A 41 FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNP 119 (315)
T ss_dssp -----------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSC
T ss_pred eEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCC
Confidence 788999999999998875 99999999975422 345677789999999999999999887 99999999886541
Q ss_pred --CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCc---c----------CcccEEEccCCccccCccc
Q 015570 94 --FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY---K----------ETHNITLSQEDTLFGGQVS 158 (404)
Q Consensus 94 --~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~---~----------~~~~i~~~~~~~~~~~~Is 158 (404)
.+.....+...|+.+|..+|++++..++++++||++++||+.... . ....+.+. +...+.+++
T Consensus 120 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~ 197 (315)
T 2ydy_A 120 PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTH 197 (315)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEE
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEE
Confidence 111223456789999999999999989999999999999976531 0 00112221 234467899
Q ss_pred HHHHHHHHHHHHhCC--CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 159 NLQVAELLACMAKNR--SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 159 ~~DVA~ai~~~l~~~--~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
++|||++++.++.+. ....+++|||++++. +++.|+++.+.+..|.+.
T Consensus 198 v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~e~~~~i~~~~g~~~ 247 (315)
T 2ydy_A 198 VKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQ---MTKYEMACAIADAFNLPS 247 (315)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEECCCSCC---BCHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhhccccCCCCeEEEcCCCc---ccHHHHHHHHHHHhCCCh
Confidence 999999999998764 113478999999875 999999999999888643
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7.2e-19 Score=174.26 Aligned_cols=175 Identities=12% Similarity=-0.015 Sum_probs=145.0
Q ss_pred eEEEEcCC-CCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCC-EEEEeccCcccCCCCc
Q 015570 18 LELVECDL-EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFGFP 95 (404)
Q Consensus 18 veiV~gDl-~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVk-rfI~vSS~gv~~~~~~ 95 (404)
++++.+|+ .|.+.+.++++++|+||||||.... .++...+++|+.++.+|+++|++.|++ ||||+||.+++.
T Consensus 26 ~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---- 99 (369)
T 3st7_A 26 HHIFEVHRQTKEEELESALLKADFIVHLAGVNRP--EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---- 99 (369)
T ss_dssp CEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCT--TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----
T ss_pred CEEEEECCCCCHHHHHHHhccCCEEEECCcCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----
Confidence 49999999 9999999999999999999997653 356777889999999999999999998 999999999876
Q ss_pred hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-------------cccEEEccCCccccCccc
Q 015570 96 AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVS 158 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-------------~~~i~~~~~~~~~~~~Is 158 (404)
...|+.+|+.+|++++. .|+++++||++++||+...... ...+.+. ++.....+|+
T Consensus 100 ------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~ 172 (369)
T 3st7_A 100 ------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNY 172 (369)
T ss_dssp ------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCS-CTTCEEEEEE
T ss_pred ------CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEec-CCCeEEEEEE
Confidence 25799999999999986 7999999999999998653211 1112222 3344457899
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 159 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 159 ~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
++|+|++++.++.++....+++||+.+++. +++.|+++.+.+..|.+
T Consensus 173 v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~---~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 173 VDDIVAEIKRAIEGTPTIENGVPTVPNVFK---VTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp HHHHHHHHHHHHHTCCCEETTEECCSCCEE---EEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcccCCceEEeCCCCc---eeHHHHHHHHHHHhCCC
Confidence 999999999999987743378999998865 99999999999988754
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=169.46 Aligned_cols=187 Identities=11% Similarity=-0.103 Sum_probs=145.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCC---CEEEEeccCc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLG 88 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agV---krfI~vSS~g 88 (404)
.+++++.+|+.|.+.+.+++++ +|+||||||..... ..++...+++|+.++.+|+++|.+.++ ++|||+||.+
T Consensus 79 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~ 158 (375)
T 1t2a_A 79 GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE 158 (375)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred CCceEEEccCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchh
Confidence 5789999999999999999885 69999999975421 134455678999999999999999998 8999999998
Q ss_pred ccCCCC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-------------cc--cE
Q 015570 89 TNKFGF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------TH--NI 144 (404)
Q Consensus 89 v~~~~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-------------~~--~i 144 (404)
+++... +.....+...|+.+|..+|++++. .+++++++|++.+||++..... .+ ..
T Consensus 159 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (375)
T 1t2a_A 159 LYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLEC 238 (375)
T ss_dssp GTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSC
T ss_pred hhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCce
Confidence 865321 122334567899999999999875 4899999999999997542110 01 11
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+++...+.+|+++|+|++++.+++++. +++|||++++. +++.|+++.+.+..|.+
T Consensus 239 ~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~~~---~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 239 FSLGNLDAKRDWGHAKDYVEAMWLMLQNDE---PEDFVIATGEV---HSVREFVEKSFLHIGKT 296 (375)
T ss_dssp EEESCTTCEECCEEHHHHHHHHHHHHHSSS---CCCEEECCSCC---EEHHHHHHHHHHHTTCC
T ss_pred eEeCCCCceeeeEEHHHHHHHHHHHHhcCC---CceEEEeCCCc---ccHHHHHHHHHHHhCCC
Confidence 222334455679999999999999998765 47999998875 99999999999998854
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.3e-18 Score=176.26 Aligned_cols=182 Identities=16% Similarity=0.112 Sum_probs=138.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC-
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG- 93 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~- 93 (404)
..+++++.+|+.|.+.+. ++.++|+||||++.... ..+...++++|+.++.+|+++|++ ++++|||+||.++ +..
T Consensus 210 ~~~v~~v~~Dl~d~~~l~-~~~~~D~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~ 285 (508)
T 4f6l_B 210 LSNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYF 285 (508)
T ss_dssp STTEEEEEEBTTBCSSCC-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEE
T ss_pred cCceEEEecCCcccccCC-CccCCCEEEECCceecC-CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCC
Confidence 368999999999988777 77899999999997642 346677889999999999999999 7789999999988 211
Q ss_pred ---------Cchhh---cccchHHHHHHHHHHHHHHH---CCCCEEEEEcCccCCCCCCcc---C--------------c
Q 015570 94 ---------FPAAI---LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYK---E--------------T 141 (404)
Q Consensus 94 ---------~~~~~---~~~~~~y~~sK~~~E~~l~~---~gl~~tIlRpg~~~G~~~~~~---~--------------~ 141 (404)
.+.+. ..+..+|+.+|+.+|++++. .|++++|||++++||+..... . .
T Consensus 286 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~ 365 (508)
T 4f6l_B 286 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ 365 (508)
T ss_dssp CTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTT
T ss_pred ccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHH
Confidence 01111 23568999999999999986 799999999999999754321 0 0
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
........+...+.+|+++|||++++.++.++. .+++|||++++. ++|.|+++.+.+..
T Consensus 366 ~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~---~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 366 LDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNK---MPVKSLLECVKRKE 424 (508)
T ss_dssp CSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC--SCSEEEESCSCE---EEHHHHHHHHHSSC
T ss_pred cCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC--CCCEEEeCCCCC---CCHHHHHHHHHHcC
Confidence 011111122344579999999999999998876 589999999985 99999999988753
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.4e-18 Score=166.63 Aligned_cols=174 Identities=10% Similarity=0.083 Sum_probs=139.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|++|.+.+.++++++|+|||+||.... ...++...+++|+.++.+|+++|.+.|++|||++||..+...
T Consensus 70 ~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p- 148 (344)
T 2gn4_A 70 PRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP- 148 (344)
T ss_dssp TTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC-
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC-
Confidence 58999999999999999999999999999997531 122345678899999999999999999999999999765432
Q ss_pred CchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-------cc--cEEEccCCccccCcc
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-------TH--NITLSQEDTLFGGQV 157 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-------~~--~i~~~~~~~~~~~~I 157 (404)
...|+.+|+.+|++++. .|+.+++||+|++||+++.... .+ .+.+. ++...+.++
T Consensus 149 --------~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i 219 (344)
T 2gn4_A 149 --------INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWI 219 (344)
T ss_dssp --------CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEE
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeE
Confidence 36799999999999985 4799999999999997643110 11 24443 333445689
Q ss_pred cHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 158 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 158 s~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
+++|+|++++.++++.. .+++|++.++. +++.|+++.+....
T Consensus 220 ~v~D~a~~v~~~l~~~~--~g~~~~~~~~~----~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 220 TLDEGVSFVLKSLKRMH--GGEIFVPKIPS----MKMTDLAKALAPNT 261 (344)
T ss_dssp CHHHHHHHHHHHHHHCC--SSCEEEECCCE----EEHHHHHHHHCTTC
T ss_pred EHHHHHHHHHHHHhhcc--CCCEEecCCCc----EEHHHHHHHHHHhC
Confidence 99999999999998754 47899887664 99999999998644
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-18 Score=165.00 Aligned_cols=164 Identities=12% Similarity=0.012 Sum_probs=131.3
Q ss_pred CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC-----chhhcccchHHHHHH
Q 015570 37 NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAILNLFWGVLLWK 109 (404)
Q Consensus 37 gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~-----~~~~~~~~~~y~~sK 109 (404)
++|+||||++.... ...++...++ |+.++.+|+++|++.+++||||+||.++++... +.....+...|+.+|
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK 147 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASK 147 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 89999999997642 1235556677 999999999999999999999999998865431 222345567899999
Q ss_pred HHHHHHHHH----CCC-CEEEEEcCccCCCCCCccC-----------cccEEEccCCccccCcccHHHHHHHHHHHHhCC
Q 015570 110 RKAEEALIA----SGL-PYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 110 ~~~E~~l~~----~gl-~~tIlRpg~~~G~~~~~~~-----------~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~ 173 (404)
+.+|++++. .|+ ++++||++++||++..... ...+.+.+++...+.+|+++|||++++.++.++
T Consensus 148 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 227 (321)
T 3vps_A 148 VGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP 227 (321)
T ss_dssp HHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcC
Confidence 999999986 689 9999999999998654211 123445555566678999999999999999987
Q ss_pred CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 174 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 174 ~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.. + +|||++++. +++.|+++.+. ..|.+
T Consensus 228 ~~--g-~~~i~~~~~---~s~~e~~~~i~-~~g~~ 255 (321)
T 3vps_A 228 LP--S-VVNFGSGQS---LSVNDVIRILQ-ATSPA 255 (321)
T ss_dssp CC--S-EEEESCSCC---EEHHHHHHHHH-TTCTT
T ss_pred CC--C-eEEecCCCc---ccHHHHHHHHH-HhCCC
Confidence 73 5 999998875 99999999999 88854
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-18 Score=167.45 Aligned_cols=183 Identities=10% Similarity=-0.005 Sum_probs=142.0
Q ss_pred EEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC-
Q 015570 20 LVECDLEKRVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF- 94 (404)
Q Consensus 20 iV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~- 94 (404)
++.+|+.|.+.+.+++++ +|+||||+|.... ...++...+++|+.++.+|+++|++.++ ||||+||.++++...
T Consensus 35 ~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~ 113 (299)
T 1n2s_A 35 EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGD 113 (299)
T ss_dssp SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTT
T ss_pred cccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCC
Confidence 356899999999999986 9999999997642 1345566788999999999999999998 899999998865431
Q ss_pred ----chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc---------CcccEEEccCCccccCcccHHH
Q 015570 95 ----PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQ 161 (404)
Q Consensus 95 ----~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~---------~~~~i~~~~~~~~~~~~Is~~D 161 (404)
+.....+...|+.+|..+|++++..+.++++||++++||++.... ....+.+.+ ...+.+|+++|
T Consensus 114 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D 191 (299)
T 1n2s_A 114 IPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAEL 191 (299)
T ss_dssp CCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHH
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHH
Confidence 122344567899999999999998777999999999999865311 011122222 24567999999
Q ss_pred HHHHHHHHHhCCC-CC-CCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 162 VAELLACMAKNRS-LS-YCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 162 VA~ai~~~l~~~~-~~-~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+|++++.++++.. .. .+++||+++++. +++.|+++.+.+..|.+
T Consensus 192 va~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 192 LADCTAHAIRVALNKPEVAGLYHLVAGGT---TTWHDYAALVFDEARKA 237 (299)
T ss_dssp HHHHHHHHHHHHHHCGGGCEEEECCCBSC---EEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCceEEEeCCCC---CCHHHHHHHHHHHhCCC
Confidence 9999999998752 12 378999999874 89999999998888743
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.3e-18 Score=165.11 Aligned_cols=187 Identities=10% Similarity=-0.089 Sum_probs=145.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCC-CEEEEeccCccc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTN 90 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agV-krfI~vSS~gv~ 90 (404)
.+++++.+|+.|.+.+.+++++ +|+||||||..... ..++...+++|+.++.+|+++|.+.++ +||||+||.+++
T Consensus 52 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vy 131 (345)
T 2z1m_A 52 NDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMF 131 (345)
T ss_dssp TTEEECCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGG
T ss_pred CceeEEECCCCCHHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhc
Confidence 4799999999999999999985 69999999975321 234556788999999999999999887 899999999876
Q ss_pred CCCC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCc-------------c--cEEE
Q 015570 91 KFGF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET-------------H--NITL 146 (404)
Q Consensus 91 ~~~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~-------------~--~i~~ 146 (404)
+... +.....+...|+.+|..+|++++. .+++++++|+..+||++...... + ...+
T Consensus 132 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (345)
T 2z1m_A 132 GKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLV 211 (345)
T ss_dssp CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEE
T ss_pred CCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeee
Confidence 5321 122334567899999999999875 48999999999999986432110 1 1112
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+...+.+++++|||++++.+++++. +++|||++++. +++.|+++.+.+..|.+
T Consensus 212 ~~~~~~~~~~~~v~Dva~a~~~~~~~~~---~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 212 LGNLNAKRDWGYAPEYVEAMWLMMQQPE---PDDYVIATGET---HTVREFVEKAAKIAGFD 267 (345)
T ss_dssp ESCTTCEECCEEHHHHHHHHHHHHTSSS---CCCEEECCSCC---EEHHHHHHHHHHHTTCC
T ss_pred eCCCCceeeeEEHHHHHHHHHHHHhCCC---CceEEEeCCCC---ccHHHHHHHHHHHhCCC
Confidence 2333445568999999999999998765 47999998875 99999999999998864
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-17 Score=171.33 Aligned_cols=187 Identities=17% Similarity=0.114 Sum_probs=141.7
Q ss_pred CCeEEEEcCCC------CHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 16 EMLELVECDLE------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 16 ~gveiV~gDl~------d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
.+++++.+|+. |.+.+..+++++|+||||||.... .++...+++|+.++.+|+++|.+.++++|||+||.++
T Consensus 140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v 217 (478)
T 4dqv_A 140 DRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADV 217 (478)
T ss_dssp TTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGG
T ss_pred CceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhh
Confidence 68999999998 667899999999999999998754 5667889999999999999999999999999999888
Q ss_pred cCCCCch-----hhccc-----------chHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCC---ccCc-----
Q 015570 90 NKFGFPA-----AILNL-----------FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDA---YKET----- 141 (404)
Q Consensus 90 ~~~~~~~-----~~~~~-----------~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~---~~~~----- 141 (404)
+...... ....+ ...|+.+|+.+|++++. .|+++++||+|+|||+... +...
T Consensus 218 ~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~ 297 (478)
T 4dqv_A 218 GAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTR 297 (478)
T ss_dssp GTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHH
T ss_pred cCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHH
Confidence 6542111 11111 24599999999999986 4999999999999997431 1100
Q ss_pred --------ccEEEc--c---C---CccccCcccHHHHHHHHHHHHhC----CCCCCCcEEEEEcCCCCCCccHHHHHHHc
Q 015570 142 --------HNITLS--Q---E---DTLFGGQVSNLQVAELLACMAKN----RSLSYCKVVEVIAETTAPLTPMEELLAKI 201 (404)
Q Consensus 142 --------~~i~~~--~---~---~~~~~~~Is~~DVA~ai~~~l~~----~~~~~~~i~nI~~~~~~~~~si~ell~~i 201 (404)
+.+... . + ......+|+++|||++++.++.+ .. ..+++|||++++. ..++|.|+++.+
T Consensus 298 l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~-~~~~~ynv~~~~~-~~~s~~el~~~l 375 (478)
T 4dqv_A 298 MVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL-AGFATYHVMNPHD-DGIGLDEYVDWL 375 (478)
T ss_dssp HHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCC-CSEEEEEESCCCC-SSCSHHHHHHHH
T ss_pred HHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCC-CCCceEEecCCCC-CCcCHHHHHHHH
Confidence 111100 0 0 13445789999999999999986 33 4578999999862 127899999888
Q ss_pred ccccCC
Q 015570 202 PSQRAE 207 (404)
Q Consensus 202 ~~~~g~ 207 (404)
.+. |.
T Consensus 376 ~~~-g~ 380 (478)
T 4dqv_A 376 IEA-GY 380 (478)
T ss_dssp HHT-TC
T ss_pred HHc-CC
Confidence 885 53
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.8e-18 Score=165.69 Aligned_cols=190 Identities=14% Similarity=0.069 Sum_probs=140.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++.+|++|.+.+.++++ ++|+||||||..... ..++...+++|+.++.+|+++|++.+++||||+||.++++
T Consensus 50 ~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 129 (338)
T 1udb_A 50 KHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYG 129 (338)
T ss_dssp SCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred CcceEEEccCCCHHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhC
Confidence 368899999999999998886 599999999975321 1234456789999999999999999999999999998765
Q ss_pred CCC-----chhhccc-chHHHHHHHHHHHHHHH----C-CCCEEEEEcCccCCCCCC------c----c-----------
Q 015570 92 FGF-----PAAILNL-FWGVLLWKRKAEEALIA----S-GLPYTIVRPGGMERPTDA------Y----K----------- 139 (404)
Q Consensus 92 ~~~-----~~~~~~~-~~~y~~sK~~~E~~l~~----~-gl~~tIlRpg~~~G~~~~------~----~----------- 139 (404)
... +.....+ ...|+.+|..+|++++. . |+++++||++++||+... . .
T Consensus 130 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 209 (338)
T 1udb_A 130 DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAV 209 (338)
T ss_dssp SCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHH
T ss_pred CCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHH
Confidence 321 1111222 56899999999999875 3 799999999999986320 0 0
Q ss_pred -CcccEEEcc------CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 140 -ETHNITLSQ------EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 140 -~~~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
....+.+.+ ++...+.+||++|||++++.++++.. ...+++|||++++. +++.|+++.+.+.+|.+
T Consensus 210 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~---~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 210 GRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG---NSVLDVVNAFSKACGKP 283 (338)
T ss_dssp TSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCC---EEHHHHHHHHHHHHTSC
T ss_pred hcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCc---eeHHHHHHHHHHHhCCC
Confidence 001122222 22344578999999999999987532 12347999998875 89999999999988853
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.8e-18 Score=165.37 Aligned_cols=178 Identities=17% Similarity=0.162 Sum_probs=133.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~~~ 94 (404)
.+++++.+|+.|.+++.++++++|+||||++..... .|+.++.+|+++|+++| ++|||+ |+.+......
T Consensus 55 ~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~---------~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~ 124 (313)
T 1qyd_A 55 LGAKLIEASLDDHQRLVDALKQVDVVISALAGGVLS---------HHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIM 124 (313)
T ss_dssp TTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSSSS---------TTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSC
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCCEEEECCccccch---------hhHHHHHHHHHHHHhcCCCceEEe-cCCcCCcccc
Confidence 589999999999999999999999999999875321 24667899999999999 999986 6555422110
Q ss_pred chhhccc-chHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCc---------cCcccEEEccCCccccCcccHHHHHH
Q 015570 95 PAAILNL-FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY---------KETHNITLSQEDTLFGGQVSNLQVAE 164 (404)
Q Consensus 95 ~~~~~~~-~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~---------~~~~~i~~~~~~~~~~~~Is~~DVA~ 164 (404)
.....+ ...| .+|..+|+++++.|++|++||+++|++..... ...+.+.+...+.....+|+++|||+
T Consensus 125 -~~~~~p~~~~y-~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 202 (313)
T 1qyd_A 125 -EHALQPGSITF-IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGT 202 (313)
T ss_dssp -CCCCSSTTHHH-HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred -ccCCCCCcchH-HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHH
Confidence 111122 3457 99999999999999999999999988632110 11122333334445567899999999
Q ss_pred HHHHHHhCCCCCCCcEEEEEcC-CCCCCccHHHHHHHcccccCCCC
Q 015570 165 LLACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 165 ai~~~l~~~~~~~~~i~nI~~~-~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+++.++.++. ..+++|++.+. +. +++.|+++.+.+.+|.+.
T Consensus 203 ~~~~~l~~~~-~~~~~~~~~g~~~~---~s~~e~~~~~~~~~g~~~ 244 (313)
T 1qyd_A 203 YTIKSIDDPQ-TLNKTMYIRPPMNI---LSQKEVIQIWERLSEQNL 244 (313)
T ss_dssp HHHHHTTCGG-GSSSEEECCCGGGE---EEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhCcc-cCCceEEEeCCCCc---cCHHHHHHHHHHhcCCCC
Confidence 9999998765 45788888754 43 999999999999998653
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.2e-17 Score=151.53 Aligned_cols=160 Identities=7% Similarity=-0.063 Sum_probs=121.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.|.+. .++.++|+||||+|.... ......|+.++++|+++|++.| +|||++||.++......
T Consensus 43 ~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-----~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~ 114 (224)
T 3h2s_A 43 ATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWG-----SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGA 114 (224)
T ss_dssp TTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTT-----SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTC
T ss_pred CCceEEecccccccH--hhcccCCEEEECCccCCC-----cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCC
Confidence 689999999999887 789999999999998621 1236789999999999999999 89999999865322111
Q ss_pred --------hhhcccchHHHHHHHHHHHH--HH-HCCCCEEEEEcCccCCCCCCccCcccEEEccC----CccccCcccHH
Q 015570 96 --------AAILNLFWGVLLWKRKAEEA--LI-ASGLPYTIVRPGGMERPTDAYKETHNITLSQE----DTLFGGQVSNL 160 (404)
Q Consensus 96 --------~~~~~~~~~y~~sK~~~E~~--l~-~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~----~~~~~~~Is~~ 160 (404)
.....+...|+.+|..+|.+ +. ..|++|++|||++|||++... . +..... ......+|+++
T Consensus 115 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~---~-~~~~~~~~~~~~~~~~~i~~~ 190 (224)
T 3h2s_A 115 DHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPAT---S-YVAGKDTLLVGEDGQSHITTG 190 (224)
T ss_dssp SSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCCCC---C-EEEESSBCCCCTTSCCBCCHH
T ss_pred CccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccCCCccc---C-ceecccccccCCCCCceEeHH
Confidence 11223356799999999965 22 479999999999999974321 1 222211 12224689999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 161 QVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 161 DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
|||++++.+++++. ..+++|++.+.+.
T Consensus 191 DvA~~~~~~l~~~~-~~g~~~~~~~~~~ 217 (224)
T 3h2s_A 191 NMALAILDQLEHPT-AIRDRIVVRDADL 217 (224)
T ss_dssp HHHHHHHHHHHSCC-CTTSEEEEEECC-
T ss_pred HHHHHHHHHhcCcc-ccCCEEEEecCcc
Confidence 99999999999987 5789999998864
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=163.61 Aligned_cols=182 Identities=12% Similarity=0.025 Sum_probs=140.1
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
..+++++.+|+.+. ++.++|+|||||+..... ..++...+++|+.++.+|+++|++.++ ||||+||.++++.
T Consensus 74 ~~~~~~~~~D~~~~-----~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~ 147 (343)
T 2b69_A 74 HENFELINHDVVEP-----LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD 147 (343)
T ss_dssp CTTEEEEECCTTSC-----CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBS
T ss_pred CCceEEEeCccCCh-----hhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCC
Confidence 35799999999875 367999999999975421 234455678999999999999999887 9999999988653
Q ss_pred CC-----ch-----hhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-------------CcccEE
Q 015570 93 GF-----PA-----AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------ETHNIT 145 (404)
Q Consensus 93 ~~-----~~-----~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-------------~~~~i~ 145 (404)
.. +. ....+...|+.+|+.+|++++. .|+++++||++++||++.... ....+.
T Consensus 148 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (343)
T 2b69_A 148 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 227 (343)
T ss_dssp CSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEE
T ss_pred CCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCce
Confidence 21 11 1234457899999999999864 599999999999999864321 012233
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+..++...+.+|+++|||++++.++++.. +++|||++++. +++.|+++.+.+..|..
T Consensus 228 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 284 (343)
T 2b69_A 228 VYGSGSQTRAFQYVSDLVNGLVALMNSNV---SSPVNLGNPEE---HTILEFAQLIKNLVGSG 284 (343)
T ss_dssp EESSSCCEEECEEHHHHHHHHHHHHTSSC---CSCEEESCCCE---EEHHHHHHHHHHHHTCC
T ss_pred EcCCCCeEEeeEeHHHHHHHHHHHHhcCC---CCeEEecCCCC---CcHHHHHHHHHHHhCCC
Confidence 44444455679999999999999997653 67999999875 89999999999988854
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-18 Score=164.05 Aligned_cols=177 Identities=14% Similarity=0.113 Sum_probs=138.9
Q ss_pred cCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC----
Q 015570 23 CDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF---- 94 (404)
Q Consensus 23 gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~---- 94 (404)
+|+.|.+.+.++++ ++|+||||+|..... ..++...+++|+.++.+|+++|++.++ ||||+||.++++...
T Consensus 47 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~ 125 (292)
T 1vl0_A 47 LDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPI 125 (292)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCB
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCC
Confidence 69999999999998 899999999975421 234566788999999999999999998 999999998765321
Q ss_pred -chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccC--------cccEEEccCCccccCcccHHHHHHH
Q 015570 95 -PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAEL 165 (404)
Q Consensus 95 -~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~--------~~~i~~~~~~~~~~~~Is~~DVA~a 165 (404)
+.....+...|+.+|..+|++++..+.++++||++++||+...... ...+.+.+ ...+.+++++|||++
T Consensus 126 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~ 203 (292)
T 1vl0_A 126 TEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARV 203 (292)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHH
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHhhCCCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHH
Confidence 1122345678999999999999998889999999999998221100 01122222 245678999999999
Q ss_pred HHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 166 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 166 i~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
++.++.++ .+++||+++++. +++.|+++.+.+..|.+
T Consensus 204 ~~~~~~~~---~~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 240 (292)
T 1vl0_A 204 VLKVIDEK---NYGTFHCTCKGI---CSWYDFAVEIFRLTGID 240 (292)
T ss_dssp HHHHHHHT---CCEEEECCCBSC---EEHHHHHHHHHHHHCCC
T ss_pred HHHHHhcC---CCcEEEecCCCC---ccHHHHHHHHHHHhCCC
Confidence 99999875 478999998874 99999999999988854
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-17 Score=164.33 Aligned_cols=186 Identities=10% Similarity=-0.064 Sum_probs=144.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCC---CEEEEeccCc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLG 88 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agV---krfI~vSS~g 88 (404)
.+++++.+|+.|.+.+.+++++ +|+||||||..... ..++...+++|+.++.+|+++|.+.++ +||||+||.+
T Consensus 55 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~ 134 (372)
T 1db3_A 55 PKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE 134 (372)
T ss_dssp CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred CceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChh
Confidence 5789999999999999999885 79999999975422 223344568899999999999999998 8999999998
Q ss_pred ccCCCC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-------------cc--cE
Q 015570 89 TNKFGF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------TH--NI 144 (404)
Q Consensus 89 v~~~~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-------------~~--~i 144 (404)
+++... +.....+...|+.+|..+|++++. .|+.++++|++.+||++..... .+ ..
T Consensus 135 v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~ 214 (372)
T 1db3_A 135 LYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESC 214 (372)
T ss_dssp GGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCC
T ss_pred hhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCc
Confidence 765321 122334567899999999999874 4899999999999997542110 01 12
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
...+++...+.+|+++|+|++++.+++++. +++|||++++. +++.|+++.+.+..|.
T Consensus 215 ~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~~~---~s~~e~~~~i~~~~g~ 271 (372)
T 1db3_A 215 LYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ---PEDFVIATGVQ---YSVRQFVEMAAAQLGI 271 (372)
T ss_dssp EEESCTTCEECCEEHHHHHHHHHHTTSSSS---CCCEEECCCCC---EEHHHHHHHHHHTTTE
T ss_pred eeecCCCceeeeeEHHHHHHHHHHHHhcCC---CceEEEcCCCc---eeHHHHHHHHHHHhCC
Confidence 233344455679999999999999997654 47999998875 9999999999998885
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.7e-18 Score=163.63 Aligned_cols=184 Identities=15% Similarity=0.121 Sum_probs=131.7
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCC-CcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcc-cCCC
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGT-NKFG 93 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~-~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv-~~~~ 93 (404)
+++++.+|++|.+.+.++++++|+|||+|+.......+. ...+++|+.++.+|+++|.+.+ ++||||+||.++ +...
T Consensus 57 ~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~ 136 (337)
T 2c29_D 57 HLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQE 136 (337)
T ss_dssp HEEEEECCTTSTTTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSS
T ss_pred eEEEEEcCCCCHHHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCC
Confidence 589999999999999999999999999998753222222 2367899999999999999887 899999999864 2211
Q ss_pred C------chhh---------cccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCcccEE-----EccC
Q 015570 94 F------PAAI---------LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNIT-----LSQE 149 (404)
Q Consensus 94 ~------~~~~---------~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~~~i~-----~~~~ 149 (404)
. +... ....+.|+.+|..+|++++. .|+++++|||+++||++........+. +.+.
T Consensus 137 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~ 216 (337)
T 2c29_D 137 HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN 216 (337)
T ss_dssp SCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTC
T ss_pred CCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCC
Confidence 0 0000 01345799999999998753 589999999999999864321100000 0011
Q ss_pred Ccc-----ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 150 DTL-----FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 150 ~~~-----~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
... ...+++++|||++++.++++... ++.|+++++. +++.|+++.+.+..+
T Consensus 217 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~~~~----~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 217 EAHYSIIRQGQFVHLDDLCNAHIYLFENPKA--EGRYICSSHD----CIILDLAKMLREKYP 272 (337)
T ss_dssp GGGHHHHTEEEEEEHHHHHHHHHHHHHCTTC--CEEEEECCEE----EEHHHHHHHHHHHCT
T ss_pred CccccccCCCCEEEHHHHHHHHHHHhcCccc--CceEEEeCCC----CCHHHHHHHHHHHCC
Confidence 111 12389999999999999987542 4577665543 899999999887653
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=161.81 Aligned_cols=186 Identities=15% Similarity=-0.007 Sum_probs=137.9
Q ss_pred CCeEEE-EcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHh-CCCCEEEEeccCcccCCC
Q 015570 16 EMLELV-ECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV-~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~-agVkrfI~vSS~gv~~~~ 93 (404)
.+++++ .+|++|.+.+.++++++|+||||||..... .++...+++|+.++.+|+++|.+ .+++||||+||.+++...
T Consensus 61 ~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~ 139 (342)
T 1y1p_A 61 GRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIP 139 (342)
T ss_dssp TTEEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCC
T ss_pred CceEEEEecCCcChHHHHHHHcCCCEEEEeCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCC
Confidence 578888 899999999999999999999999976432 34556778999999999999984 688999999998775322
Q ss_pred Cc---------hh----------------hcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcc
Q 015570 94 FP---------AA----------------ILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETH 142 (404)
Q Consensus 94 ~~---------~~----------------~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~ 142 (404)
.. .. ...+...|+.+|..+|++++. .++.+++|||+++||+.......+
T Consensus 140 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~ 219 (342)
T 1y1p_A 140 KPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQS 219 (342)
T ss_dssp CTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCC
T ss_pred CCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCC
Confidence 10 00 123457899999999999874 278899999999999865422100
Q ss_pred --------------cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 143 --------------NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 143 --------------~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.+.+...+ ..+.+++++|||++++.++.+.. ..++.+ ++++.. +++.|+++.+.+..|..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~-~~~g~~---~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 220 GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQ-IERRRV-YGTAGT---FDWNTVLATFRKLYPSK 293 (342)
T ss_dssp CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTT-CCSCEE-EECCEE---ECHHHHHHHHHHHCTTS
T ss_pred ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCcc-cCCceE-EEeCCC---CCHHHHHHHHHHHCCCc
Confidence 00111111 33468999999999999998754 234444 344432 89999999999988853
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.2e-18 Score=167.07 Aligned_cols=186 Identities=11% Similarity=-0.090 Sum_probs=145.0
Q ss_pred CeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCC-----EEEEeccC
Q 015570 17 MLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-----HFIMVSSL 87 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVk-----rfI~vSS~ 87 (404)
+++++.+|+.|.+.+.+++++ +|+||||||..... ..++...+++|+.++.+|+++|.+.+++ ||||+||.
T Consensus 84 ~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~ 163 (381)
T 1n7h_A 84 LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS 163 (381)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred ceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcH
Confidence 799999999999999999985 69999999976421 1244566789999999999999988776 99999999
Q ss_pred cccCCC----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-------------cc--cE
Q 015570 88 GTNKFG----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------TH--NI 144 (404)
Q Consensus 88 gv~~~~----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-------------~~--~i 144 (404)
++++.. .+.....+...|+.+|..+|++++. .|+.++++|++.+||++..... .+ ..
T Consensus 164 ~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~ 243 (381)
T 1n7h_A 164 EMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTK 243 (381)
T ss_dssp GGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCC
T ss_pred HHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCe
Confidence 886542 1122334567899999999999875 4899999999999997643210 01 11
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+.+...+.+++++|||++++.+++++. +++|||++++. +++.|+++.+.+..|.+
T Consensus 244 ~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~i~~~~~---~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 244 LFLGNLQASRDWGFAGDYVEAMWLMLQQEK---PDDYVVATEEG---HTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp EEESCTTCEEECEEHHHHHHHHHHHHTSSS---CCEEEECCSCE---EEHHHHHHHHHHHTTCC
T ss_pred EEeCCCCceeeeEEHHHHHHHHHHHHhCCC---CCeEEeeCCCC---CcHHHHHHHHHHHcCCC
Confidence 122333445679999999999999998765 48999999875 89999999999998853
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-18 Score=156.94 Aligned_cols=158 Identities=20% Similarity=0.183 Sum_probs=125.7
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+++++.+|+.|.+.+.+++ +|+||||+|.......++...+++|+.++.+|+++|++.+++||||+||.+++...
T Consensus 45 ~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~- 121 (215)
T 2a35_A 45 HPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS- 121 (215)
T ss_dssp CTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-
T ss_pred CCCceEEeccccCHHHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCC-
Confidence 468999999999999888888 99999999976433345566778999999999999999999999999999886532
Q ss_pred chhhcccchHHHHHHHHHHHHHHHCCCC-EEEEEcCccCCCCCCccCccc----EEEccCCccccCcccHHHHHHHHHHH
Q 015570 95 PAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPGGMERPTDAYKETHN----ITLSQEDTLFGGQVSNLQVAELLACM 169 (404)
Q Consensus 95 ~~~~~~~~~~y~~sK~~~E~~l~~~gl~-~tIlRpg~~~G~~~~~~~~~~----i~~~~~~~~~~~~Is~~DVA~ai~~~ 169 (404)
...|+.+|..+|++++..|++ +++|||+++||+.....-... +.....+ ...+++++|+|++++.+
T Consensus 122 -------~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~Dva~~~~~~ 192 (215)
T 2a35_A 122 -------SIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPG--KYHGIEACDLARALWRL 192 (215)
T ss_dssp -------SSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----C--HHHHHHHHHHHHHHHHH
T ss_pred -------ccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCC--CcCcEeHHHHHHHHHHH
Confidence 357999999999999999999 999999999997543110000 0000111 34689999999999999
Q ss_pred HhCCCCCCCcEEEEEcCC
Q 015570 170 AKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 170 l~~~~~~~~~i~nI~~~~ 187 (404)
++++. +++|++.+++
T Consensus 193 ~~~~~---~~~~~i~~~~ 207 (215)
T 2a35_A 193 ALEEG---KGVRFVESDE 207 (215)
T ss_dssp HTCCC---SEEEEEEHHH
T ss_pred HhcCC---CCceEEcHHH
Confidence 98765 7899999875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.4e-17 Score=150.56 Aligned_cols=160 Identities=11% Similarity=0.085 Sum_probs=111.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|++|.+. +++.++|+||||+|.... ....|+.++++|+++|++.|++|||++||.++......
T Consensus 42 ~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~ 112 (221)
T 3ew7_A 42 KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD-------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDED 112 (221)
T ss_dssp SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT-------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------
T ss_pred CCCeEEeccccChhh--hhhcCCCEEEECCcCCcc-------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCC
Confidence 689999999999887 789999999999998532 25679999999999999999999999999876322111
Q ss_pred ------hhhcccchHHHHHHHHHHHH--HH--HCCCCEEEEEcCccCCCCCCccCcccEEEccCC----ccccCcccHHH
Q 015570 96 ------AAILNLFWGVLLWKRKAEEA--LI--ASGLPYTIVRPGGMERPTDAYKETHNITLSQED----TLFGGQVSNLQ 161 (404)
Q Consensus 96 ------~~~~~~~~~y~~sK~~~E~~--l~--~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~----~~~~~~Is~~D 161 (404)
.....+...|+.+|..+|.+ ++ ..|++|++|||+++||++... +.+...... .....+|+++|
T Consensus 113 ~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D 189 (221)
T 3ew7_A 113 GNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERT---GDYQIGKDHLLFGSDGNSFISMED 189 (221)
T ss_dssp ------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC------------------------CCCHHH
T ss_pred CccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCCCcc---CceEeccccceecCCCCceEeHHH
Confidence 11122233477788877776 66 689999999999999973321 111111110 01124899999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 162 VAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 162 VA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
||++++.+++++. ..+++|++++...
T Consensus 190 va~~~~~~l~~~~-~~g~~~~~~~~~~ 215 (221)
T 3ew7_A 190 YAIAVLDEIERPN-HLNEHFTVAGKLE 215 (221)
T ss_dssp HHHHHHHHHHSCS-CTTSEEECCC---
T ss_pred HHHHHHHHHhCcc-ccCCEEEECCCCc
Confidence 9999999999987 6789999998863
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.71 E-value=5.1e-18 Score=165.49 Aligned_cols=185 Identities=18% Similarity=0.108 Sum_probs=129.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCC-CcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcc-c--
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGT-N-- 90 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~-~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv-~-- 90 (404)
.+++++.+|++|.+.+.++++++|+|||+|+.......++ ...+++|+.++.+|+++|.+.+ ++||||+||.++ +
T Consensus 59 ~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~ 138 (338)
T 2rh8_A 59 GDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTIN 138 (338)
T ss_dssp SCEEEEECCTTTSSSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHH
T ss_pred CcEEEEecCCCChHHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecC
Confidence 4789999999999999999999999999998753322233 3378999999999999999986 999999999763 1
Q ss_pred ---C---CCCchhh--------cc-cchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCcccEE-E---c
Q 015570 91 ---K---FGFPAAI--------LN-LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNIT-L---S 147 (404)
Q Consensus 91 ---~---~~~~~~~--------~~-~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~~~i~-~---~ 147 (404)
. ...+... .. ..+.|+.+|..+|++++. .|+++++|||+++||++........+. + .
T Consensus 139 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~ 218 (338)
T 2rh8_A 139 QLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLI 218 (338)
T ss_dssp HHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHH
T ss_pred CcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHH
Confidence 1 1111110 00 112599999999998864 589999999999999865321110000 0 0
Q ss_pred cCCc-------------cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 148 QEDT-------------LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 148 ~~~~-------------~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+.. ....+|+++|||++++.++++... ++.|+++++. +++.|+++.+.+..+
T Consensus 219 ~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~~~~----~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 219 TGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESA--SGRYICCAAN----TSVPELAKFLSKRYP 284 (338)
T ss_dssp HTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTC--CEEEEECSEE----ECHHHHHHHHHHHCT
T ss_pred cCCccccccccccccccCcccEEEHHHHHHHHHHHHcCCCc--CCcEEEecCC----CCHHHHHHHHHHhCC
Confidence 0000 011589999999999999987542 4578776653 899999999887654
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.1e-17 Score=160.37 Aligned_cols=183 Identities=11% Similarity=0.056 Sum_probs=135.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC---CCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC--CCCEEE-------E
Q 015570 16 EMLELVECDLEKRVQIEPALGN---ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFI-------M 83 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g---vDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI-------~ 83 (404)
.+++++.+|+.|.+.+.+++++ +|+|||||+... .++...+++|+.++.+|+++|++. +++||| |
T Consensus 48 ~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~ 124 (364)
T 2v6g_A 48 NPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHY 124 (364)
T ss_dssp SCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHH
T ss_pred CceEEEEeecCCHHHHHHHHhcCCCCCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEE
Confidence 5799999999999999999998 999999999763 245567889999999999999998 899998 7
Q ss_pred eccCcccCCCC-------chhhccc-chHHHHHHHHHHHHHHH----CC-CCEEEEEcCccCCCCCCccCc---------
Q 015570 84 VSSLGTNKFGF-------PAAILNL-FWGVLLWKRKAEEALIA----SG-LPYTIVRPGGMERPTDAYKET--------- 141 (404)
Q Consensus 84 vSS~gv~~~~~-------~~~~~~~-~~~y~~sK~~~E~~l~~----~g-l~~tIlRpg~~~G~~~~~~~~--------- 141 (404)
+||.++++... +.....+ ...|. .+|+++++ .| +++++||++++||++......
T Consensus 125 ~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~ 200 (364)
T 2v6g_A 125 MGPFESYGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYA 200 (364)
T ss_dssp HCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHH
T ss_pred EechhhccccccCCCCCCccccCCccchhhH----HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHH
Confidence 99988765421 1111111 34563 35655543 55 999999999999986542111
Q ss_pred ------c-cEEEccCC---ccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 142 ------H-NITLSQED---TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 142 ------~-~i~~~~~~---~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+ .+.+.+++ ..+..+++++|+|++++.+++++. ..+++|||++++. +++.|+++.+.+..|.+.
T Consensus 201 ~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-~~g~~~ni~~~~~---~s~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 201 AICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY-AKNEAFNVSNGDV---FKWKHFWKVLAEQFGVEC 274 (364)
T ss_dssp HHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG-GTTEEEEECCSCC---BCHHHHHHHHHHHHTCCB
T ss_pred HHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC-CCCceEEecCCCc---CCHHHHHHHHHHHhCCCC
Confidence 0 01111111 122456788999999999998765 3578999999875 999999999999988643
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.2e-17 Score=158.46 Aligned_cols=183 Identities=16% Similarity=0.113 Sum_probs=128.1
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCC-CCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcccC-CC
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNK-FG 93 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d-~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv~~-~~ 93 (404)
+++++.+|++|.+.+..+++++|+|||||+.......+ +...+++|+.++.+|+++|.+. +++||||+||.++.. ..
T Consensus 54 ~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~ 133 (322)
T 2p4h_X 54 KLHFFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNG 133 (322)
T ss_dssp HEEECCCCTTCGGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSS
T ss_pred ceEEEecCCCCHHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCC
Confidence 57899999999999999999999999999764322223 2347889999999999999998 899999999987422 11
Q ss_pred C------chh--------hcccc-hHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCcccE----EEccCC
Q 015570 94 F------PAA--------ILNLF-WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNI----TLSQED 150 (404)
Q Consensus 94 ~------~~~--------~~~~~-~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~~~i----~~~~~~ 150 (404)
. +.. ...+. +.|+.+|..+|+++++ .|+++++|||+++||++........+ ....+.
T Consensus 134 ~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~ 213 (322)
T 2p4h_X 134 KDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGK 213 (322)
T ss_dssp SCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSC
T ss_pred CCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCC
Confidence 0 000 00111 3799999999998863 68999999999999986432110000 000000
Q ss_pred -----ccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 151 -----TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 151 -----~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
.....+++++|||++++.++++.. . .+.|+ ++++. +++.|+++.+.+..
T Consensus 214 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~-~g~~~-~~~~~---~s~~e~~~~i~~~~ 267 (322)
T 2p4h_X 214 KEQIGVTRFHMVHVDDVARAHIYLLENSV-P-GGRYN-CSPFI---VPIEEMSQLLSAKY 267 (322)
T ss_dssp GGGCCEEEEEEEEHHHHHHHHHHHHHSCC-C-CEEEE-CCCEE---EEHHHHHHHHHHHC
T ss_pred CccCcCCCcCEEEHHHHHHHHHHHhhCcC-C-CCCEE-EcCCC---CCHHHHHHHHHHhC
Confidence 011158999999999999998754 2 33588 44443 89999999997755
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.2e-16 Score=144.05 Aligned_cols=156 Identities=21% Similarity=0.138 Sum_probs=122.1
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 14 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
...+++++.+|++|.+++.++++++|+|||++|.. |++ +++++++|++.|++|||++||.+++...
T Consensus 50 ~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~-------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~ 115 (221)
T 3r6d_A 50 DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES-------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEF 115 (221)
T ss_dssp TSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC-------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCS
T ss_pred CCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC-------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCC
Confidence 34689999999999999999999999999999853 345 9999999999999999999999886543
Q ss_pred Cchh---hcccch-HHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCc-cccCcccHHHHHHHHHH
Q 015570 94 FPAA---ILNLFW-GVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT-LFGGQVSNLQVAELLAC 168 (404)
Q Consensus 94 ~~~~---~~~~~~-~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~-~~~~~Is~~DVA~ai~~ 168 (404)
.... ....+. .|+.+|..+|++++..|++|++||||+|+++.. ...+.....+. ..+.+++++|||++++.
T Consensus 116 ~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~~~----~~~~~~~~~~~~~~~~~~~~~dvA~~~~~ 191 (221)
T 3r6d_A 116 PVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPE----XTDYELIPEGAQFNDAQVSREAVVKAIFD 191 (221)
T ss_dssp CHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEECCTT----CCCCEEECTTSCCCCCEEEHHHHHHHHHH
T ss_pred CcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhhcCCCC----CcceeeccCCccCCCceeeHHHHHHHHHH
Confidence 2110 011122 799999999999999999999999999998622 12223322222 22347999999999999
Q ss_pred HH--hCCCCCCCcEEEEEcCC
Q 015570 169 MA--KNRSLSYCKVVEVIAET 187 (404)
Q Consensus 169 ~l--~~~~~~~~~i~nI~~~~ 187 (404)
++ .++..+.++.+.+.++.
T Consensus 192 l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 192 ILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp HHTCSCCGGGTTEEEEEECTT
T ss_pred HHHhcChhhhhcceeeecCCC
Confidence 99 88776678899988765
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-17 Score=153.02 Aligned_cols=165 Identities=16% Similarity=0.032 Sum_probs=128.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC-
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF- 94 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~- 94 (404)
.+++++.+|+.|.+.+.++++++|+||||+|... ..++...+++|+.++.+|++++++.+++||||+||.++++...
T Consensus 42 ~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~ 119 (267)
T 3ay3_A 42 AHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSV--ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR 119 (267)
T ss_dssp TTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCS--CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT
T ss_pred CCccEEEccCCCHHHHHHHHcCCCEEEECCcCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC
Confidence 4789999999999999999999999999999762 2344556789999999999999999999999999998764321
Q ss_pred -----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHH
Q 015570 95 -----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 165 (404)
Q Consensus 95 -----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~a 165 (404)
+.....+...|+.+|+.+|++++. .|+++++|||+++|+... .+.....+++++|+|++
T Consensus 120 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~------------~~~~~~~~~~~~dva~~ 187 (267)
T 3ay3_A 120 TTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK------------DARMMATWLSVDDFMRL 187 (267)
T ss_dssp TSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC------------SHHHHHHBCCHHHHHHH
T ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC------------CCCeeeccccHHHHHHH
Confidence 112334567899999999999863 689999999999984210 11223568999999999
Q ss_pred HHHHHhCCCCCCCcEEEEEcCCCCCCccHH
Q 015570 166 LACMAKNRSLSYCKVVEVIAETTAPLTPME 195 (404)
Q Consensus 166 i~~~l~~~~~~~~~i~nI~~~~~~~~~si~ 195 (404)
++.+++++. ..+++|++.++......++.
T Consensus 188 ~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 216 (267)
T 3ay3_A 188 MKRAFVAPK-LGCTVVYGASANTESWWDND 216 (267)
T ss_dssp HHHHHHSSC-CCEEEEEECCSCSSCCBCCG
T ss_pred HHHHHhCCC-CCceeEecCCCccccccCHH
Confidence 999998875 34578888877653334433
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-16 Score=149.57 Aligned_cols=165 Identities=16% Similarity=0.050 Sum_probs=132.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+++++.+|+.|.+++.++++++|+||||||... ..++...+++|+.++.+|++++++.+++||||+||.++++...
T Consensus 42 ~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~ 119 (267)
T 3rft_A 42 GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISV--EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYP 119 (267)
T ss_dssp CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCS--CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSB
T ss_pred CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcC--cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCC
Confidence 46899999999999999999999999999999853 3355667899999999999999999999999999987764221
Q ss_pred ------chhhcccchHHHHHHHHHHHHHH----HCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHH
Q 015570 95 ------PAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 164 (404)
Q Consensus 95 ------~~~~~~~~~~y~~sK~~~E~~l~----~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ 164 (404)
+.....+...|+.+|..+|.+++ +.|+++++||++.+|+... .......+++.+|+++
T Consensus 120 ~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~------------~~~~~~~~~~~~d~a~ 187 (267)
T 3rft_A 120 QTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPN------------NYRMLSTWFSHDDFVS 187 (267)
T ss_dssp TTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCC------------STTHHHHBCCHHHHHH
T ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCC------------CCCceeeEEcHHHHHH
Confidence 11234456789999999999886 4699999999999998522 2233456899999999
Q ss_pred HHHHHHhCCCCCCCcEEEEEcCCCCCCccH
Q 015570 165 LLACMAKNRSLSYCKVVEVIAETTAPLTPM 194 (404)
Q Consensus 165 ai~~~l~~~~~~~~~i~nI~~~~~~~~~si 194 (404)
++..+++... ..+.++++++++....+++
T Consensus 188 ~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~ 216 (267)
T 3rft_A 188 LIEAVFRAPV-LGCPVVWGASANDAGWWDN 216 (267)
T ss_dssp HHHHHHHCSC-CCSCEEEECCCCTTCCBCC
T ss_pred HHHHHHhCCC-CCceEEEEeCCCCCCcccC
Confidence 9999998877 4567888888875444443
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-16 Score=153.98 Aligned_cols=172 Identities=16% Similarity=0.176 Sum_probs=131.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~~~ 94 (404)
.+++++.+|+.|.+++.++++++|+||||++... +.++.+|+++|+++| |+|||+ |+.+.....
T Consensus 55 ~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~- 119 (307)
T 2gas_A 55 LGVILLEGDINDHETLVKAIKQVDIVICAAGRLL-------------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDR- 119 (307)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCSEEEECSSSSC-------------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTS-
T ss_pred CCCEEEEeCCCCHHHHHHHHhCCCEEEECCcccc-------------cccHHHHHHHHHhcCCceEEee-cccccCccc-
Confidence 5799999999999999999999999999998642 346789999999998 999984 655432211
Q ss_pred chhhccc-chHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCc--------cCcccEEEccCCccccCcccHHHHHHH
Q 015570 95 PAAILNL-FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY--------KETHNITLSQEDTLFGGQVSNLQVAEL 165 (404)
Q Consensus 95 ~~~~~~~-~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~--------~~~~~i~~~~~~~~~~~~Is~~DVA~a 165 (404)
.....+ ...| .+|..+|++++..|++|++||+++|++..... .....+.+...+.....+++++|||++
T Consensus 120 -~~~~~p~~~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 197 (307)
T 2gas_A 120 -HDAVEPVRQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF 197 (307)
T ss_dssp -CCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred -ccCCCcchhHH-HHHHHHHHHHHHcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence 111122 3467 99999999999999999999999998753211 112234444444455678999999999
Q ss_pred HHHHHhCCCCCCCcEEEEEcC-CCCCCccHHHHHHHcccccCCC
Q 015570 166 LACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 166 i~~~l~~~~~~~~~i~nI~~~-~~~~~~si~ell~~i~~~~g~~ 208 (404)
++.++.++. ..+++|++.+. +. +++.|+++.+.+.+|.+
T Consensus 198 ~~~~l~~~~-~~~~~~~~~~~~~~---~s~~e~~~~~~~~~g~~ 237 (307)
T 2gas_A 198 TIRAANDPN-TLNKAVHIRLPKNY---LTQNEVIALWEKKIGKT 237 (307)
T ss_dssp HHHHHTCGG-GTTEEEECCCGGGE---EEHHHHHHHHHHHHTSC
T ss_pred HHHHHcCcc-ccCceEEEeCCCCc---CCHHHHHHHHHHHhCCC
Confidence 999998765 45788888753 33 89999999999999865
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=8.6e-17 Score=159.20 Aligned_cols=174 Identities=16% Similarity=0.042 Sum_probs=131.7
Q ss_pred CCeEEEEcC-CCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCCC
Q 015570 16 EMLELVECD-LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gD-l~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~~ 93 (404)
.+++++.+| ++|.+++.++++++|+|||+++... ...|..+ ++|+++|++.| ++||||+||.+.....
T Consensus 51 ~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~~---------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~ 120 (352)
T 1xgk_A 51 PNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQA---------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYG 120 (352)
T ss_dssp TTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTT---------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTS
T ss_pred CCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCCC---------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccC
Confidence 479999999 9999999999999999999997542 1346655 99999999999 9999999998632111
Q ss_pred CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc----------CcccE--EEccCCccccCcccH-H
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK----------ETHNI--TLSQEDTLFGGQVSN-L 160 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~----------~~~~i--~~~~~~~~~~~~Is~-~ 160 (404)
. .....|+.+|..+|++++..|+++++||+++ ||++.... ..+.+ .+...+.....+|++ +
T Consensus 121 ~-----~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~ 194 (352)
T 1xgk_A 121 P-----WPAVPMWAPKFTVENYVRQLGLPSTFVYAGI-YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEH 194 (352)
T ss_dssp S-----CCCCTTTHHHHHHHHHHHTSSSCEEEEEECE-EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHH
T ss_pred C-----CCCccHHHHHHHHHHHHHHcCCCEEEEecce-ecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHH
Confidence 1 1124688999999999999999999999885 55432210 11222 122223344568998 8
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 161 QVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 161 DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
|||++++.++.++. ...+++|+|+++. +++.|+++.+.+..|.+.
T Consensus 195 Dva~ai~~~l~~~~~~~~g~~~~l~~~~----~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 195 DVGPALLQIFKDGPQKWNGHRIALTFET----LSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp HHHHHHHHHHHHCHHHHTTCEEEECSEE----ECHHHHHHHHHHHHTSCE
T ss_pred HHHHHHHHHHhCCchhhCCeEEEEecCC----CCHHHHHHHHHHHHCCCC
Confidence 99999999998752 2358999999653 999999999999998653
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-17 Score=159.68 Aligned_cols=190 Identities=14% Similarity=0.071 Sum_probs=142.0
Q ss_pred CCCeEEEEcCCCCHhhHHHHh-CCCCEEEEcCcCCCC-CCCCCCcchhhHHHHHHHHHHHHHhCC-----CCEEEEeccC
Q 015570 15 VEMLELVECDLEKRVQIEPAL-GNASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAK-----VNHFIMVSSL 87 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL-~gvDvVI~~ag~~~~-~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-----VkrfI~vSS~ 87 (404)
..+++++.+|+.|.+.+..++ .++|+||||||.... ...++...+++|+.++.+|+++|++.+ +++|||+||.
T Consensus 63 ~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~ 142 (342)
T 2hrz_A 63 SGAVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSI 142 (342)
T ss_dssp CSEEEEEECCTTSTTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred CCceeEEEcCCCCHHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCch
Confidence 357899999999999999999 599999999997531 123455667899999999999999876 8999999999
Q ss_pred cccCCCC-----chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCC-CCCCccC--------------ccc
Q 015570 88 GTNKFGF-----PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMER-PTDAYKE--------------THN 143 (404)
Q Consensus 88 gv~~~~~-----~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G-~~~~~~~--------------~~~ 143 (404)
++++... +.....+...|+.+|..+|++++. .++++++||++.+|| ++..... ...
T Consensus 143 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~ 222 (342)
T 2hrz_A 143 AVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQE 222 (342)
T ss_dssp GGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCC
T ss_pred HhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCC
Confidence 8865421 122334567899999999999875 478999999999997 5432110 011
Q ss_pred EEEccCCccccCcccHHHHHHHHHHHHhCCCC--CCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 144 ITLSQEDTLFGGQVSNLQVAELLACMAKNRSL--SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 144 i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~--~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+.+..++.....+++++|+|++++.+++.... ..+++||+.+.. +++.|+++.+.+..|.+
T Consensus 223 ~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~----~s~~e~~~~i~~~~g~~ 285 (342)
T 2hrz_A 223 AVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLS----ATVGEQIEALRKVAGEK 285 (342)
T ss_dssp EEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEE----EEHHHHHHHHHHHHCHH
T ss_pred eeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCCCC----CCHHHHHHHHHHHcCcc
Confidence 22223333334578999999999999987641 147899996532 89999999999988753
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-17 Score=152.95 Aligned_cols=176 Identities=17% Similarity=0.133 Sum_probs=136.5
Q ss_pred EEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC--
Q 015570 21 VECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-- 94 (404)
Q Consensus 21 V~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~-- 94 (404)
+.+|+.|.+.+.+++++ +|+||||+|..... ..++...+++|+.++.+|+++|++.++ ||||+||.+++....
T Consensus 39 ~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~ 117 (273)
T 2ggs_A 39 YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGN 117 (273)
T ss_dssp EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCS
T ss_pred ceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCC
Confidence 78999999999999986 99999999976421 234556788999999999999999987 999999998864321
Q ss_pred --chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc-------CcccEEEccCCccccCcccHHHHHHH
Q 015570 95 --PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-------ETHNITLSQEDTLFGGQVSNLQVAEL 165 (404)
Q Consensus 95 --~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~-------~~~~i~~~~~~~~~~~~Is~~DVA~a 165 (404)
+.....+...|+.+|..+|++++. +++++||++.+||...... ....+.+.. + .+.+++++|+|++
T Consensus 118 ~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~dva~~ 192 (273)
T 2ggs_A 118 YKEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFK-G--YYSPISARKLASA 192 (273)
T ss_dssp BCTTSCCCCSSHHHHHHHHHHHHHCC--TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEES-C--EECCCBHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHhC--CCeEEEeccccccccHHHHHHHHHHHcCCCEEeec-C--CCCceEHHHHHHH
Confidence 112233457899999999999987 8999999999998322110 111222222 2 5678999999999
Q ss_pred HHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 166 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 166 i~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
++.++.+.. +++||+.+ +. +++.|+++.+.+..|.+.
T Consensus 193 i~~~~~~~~---~g~~~i~~-~~---~s~~e~~~~~~~~~g~~~ 229 (273)
T 2ggs_A 193 ILELLELRK---TGIIHVAG-ER---ISRFELALKIKEKFNLPG 229 (273)
T ss_dssp HHHHHHHTC---CEEEECCC-CC---EEHHHHHHHHHHHTTCCS
T ss_pred HHHHHhcCc---CCeEEECC-Cc---ccHHHHHHHHHHHhCCCh
Confidence 999998754 56999998 64 999999999999998653
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.3e-17 Score=174.36 Aligned_cols=190 Identities=13% Similarity=0.038 Sum_probs=143.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++.+|+.|.+.+.++++ ++|+||||||..... ..+....+++|+.++.+|+++|++.+++||||+||.++++
T Consensus 61 ~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg 140 (699)
T 1z45_A 61 HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYG 140 (699)
T ss_dssp SCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred CceEEEEcCCCCHHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhC
Confidence 578999999999999999998 899999999975421 1223456789999999999999999999999999998864
Q ss_pred CC---------CchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCc----------cC------
Q 015570 92 FG---------FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAY----------KE------ 140 (404)
Q Consensus 92 ~~---------~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~----------~~------ 140 (404)
.. .+.....+...|+.+|+.+|++++. .|+++++||++++||+.... ..
T Consensus 141 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~ 220 (699)
T 1z45_A 141 DATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMA 220 (699)
T ss_dssp CGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHH
T ss_pred CCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHH
Confidence 31 1111234567899999999999875 68999999999999864210 00
Q ss_pred -----c-ccEEEcc------CCccccCcccHHHHHHHHHHHHhCC-----CCCCCcEEEEEcCCCCCCccHHHHHHHccc
Q 015570 141 -----T-HNITLSQ------EDTLFGGQVSNLQVAELLACMAKNR-----SLSYCKVVEVIAETTAPLTPMEELLAKIPS 203 (404)
Q Consensus 141 -----~-~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~-----~~~~~~i~nI~~~~~~~~~si~ell~~i~~ 203 (404)
. ..+.+.+ .+...+.+|+++|||++++.++++. ....+++|||++++. +++.|+++.+.+
T Consensus 221 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~---~s~~el~~~i~~ 297 (699)
T 1z45_A 221 QVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKG---STVFEVYHAFCK 297 (699)
T ss_dssp HHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCC---EEHHHHHHHHHH
T ss_pred HHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCC---CcHHHHHHHHHH
Confidence 0 0111211 2334457899999999999988642 112367999998875 899999999999
Q ss_pred ccCCC
Q 015570 204 QRAEP 208 (404)
Q Consensus 204 ~~g~~ 208 (404)
.+|..
T Consensus 298 ~~g~~ 302 (699)
T 1z45_A 298 ASGID 302 (699)
T ss_dssp HHTCC
T ss_pred HhCCC
Confidence 88854
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=4.1e-17 Score=174.31 Aligned_cols=190 Identities=15% Similarity=0.131 Sum_probs=144.4
Q ss_pred CCCeEEEEcCCCCHhh-HHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 15 VEMLELVECDLEKRVQ-IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~-l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
..+++++.+|+.|.++ +..+++++|+||||||..... ..++...+++|+.++.+|+++|.+.+ +||||+||.++++
T Consensus 359 ~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg 437 (660)
T 1z7e_A 359 HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYG 437 (660)
T ss_dssp CTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGB
T ss_pred CCceEEEECCCCCcHHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcC
Confidence 3589999999999765 777889999999999975421 23445567899999999999999998 8999999998865
Q ss_pred CCCc-----hhh-------cccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCc--------c--------
Q 015570 92 FGFP-----AAI-------LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY--------K-------- 139 (404)
Q Consensus 92 ~~~~-----~~~-------~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~--------~-------- 139 (404)
.... ... ..+.+.|+.+|+.+|++++. .|+++++|||+++||++... .
T Consensus 438 ~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~ 517 (660)
T 1z7e_A 438 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL 517 (660)
T ss_dssp TCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHH
T ss_pred CCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHH
Confidence 3211 110 13456899999999999863 58999999999999986531 0
Q ss_pred ---CcccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC-CCCCccHHHHHHHcccccCCC
Q 015570 140 ---ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 140 ---~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~-~~~~~si~ell~~i~~~~g~~ 208 (404)
....+.+..++...+.+|+++|+|++++.++++.. ...+++||+.+++ . +++.|+++.+.+..|..
T Consensus 518 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~---~s~~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENE---ASIEELGEMLLASFEKH 588 (660)
T ss_dssp HHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGE---EEHHHHHHHHHHHHHHC
T ss_pred HHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCC---cCHHHHHHHHHHHhcCC
Confidence 01123333334455679999999999999998753 2347899999874 4 89999999998888743
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-17 Score=158.80 Aligned_cols=173 Identities=15% Similarity=0.123 Sum_probs=131.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~~~ 94 (404)
.+++++.+|+.|.+++.++++++|+||||++... +.++.+|+++|+++| ++||| .|+.+....
T Consensus 56 ~~v~~v~~D~~d~~~l~~a~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v-~S~~g~~~~-- 119 (321)
T 3c1o_A 56 MGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPM-------------ISSQIHIINAIKAAGNIKRFL-PSDFGCEED-- 119 (321)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCCEEE-CSCCSSCGG--
T ss_pred CCcEEEEecCCCHHHHHHHHcCCCEEEECCCccc-------------hhhHHHHHHHHHHhCCccEEe-ccccccCcc--
Confidence 5799999999999999999999999999998632 446799999999998 99998 355443211
Q ss_pred chhhccc-chHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCC--------ccCcccEEEccCCccccCcccHHHHHHH
Q 015570 95 PAAILNL-FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA--------YKETHNITLSQEDTLFGGQVSNLQVAEL 165 (404)
Q Consensus 95 ~~~~~~~-~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~--------~~~~~~i~~~~~~~~~~~~Is~~DVA~a 165 (404)
......+ ...| .+|..+|++++..|++|++||+++|++.... ....+.+.+...+.....+++++|||++
T Consensus 120 ~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 198 (321)
T 3c1o_A 120 RIKPLPPFESVL-EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKY 198 (321)
T ss_dssp GCCCCHHHHHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHH
T ss_pred ccccCCCcchHH-HHHHHHHHHHHHcCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHH
Confidence 0011122 3467 9999999999999999999999998763210 0122334444444555679999999999
Q ss_pred HHHHHhCCCCCCCcEEEEEcC-CCCCCccHHHHHHHcccccCCCC
Q 015570 166 LACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 166 i~~~l~~~~~~~~~i~nI~~~-~~~~~~si~ell~~i~~~~g~~~ 209 (404)
++.++.++. ..+++|++.+. +. +++.|+++.+.+.+|.+.
T Consensus 199 ~~~~l~~~~-~~g~~~~~~g~~~~---~t~~e~~~~~~~~~g~~~ 239 (321)
T 3c1o_A 199 TIKVACDPR-CCNRIVIYRPPKNI---ISQNELISLWEAKSGLSF 239 (321)
T ss_dssp HHHHHHCGG-GTTEEEECCCGGGE---EEHHHHHHHHHHHHTSCC
T ss_pred HHHHHhCcc-ccCeEEEEeCCCCc---ccHHHHHHHHHHHcCCcc
Confidence 999998876 45788888753 43 999999999999998653
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.1e-16 Score=143.96 Aligned_cols=158 Identities=20% Similarity=0.173 Sum_probs=115.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+++++.+|++|.+++.++++++|+|||+++... ....+++++++|++.+++|||++||.+++....
T Consensus 66 ~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~ 133 (236)
T 3qvo_A 66 PTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVP 133 (236)
T ss_dssp CTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT------------HHHHHHHHHHHHHHTTCCEEEEECCCCC-----
T ss_pred cCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCC
Confidence 35899999999999999999999999999998632 124578999999999999999999998865321
Q ss_pred chh---hcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHh
Q 015570 95 PAA---ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK 171 (404)
Q Consensus 95 ~~~---~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~ 171 (404)
... .......+...+..+|++++..|++|++||||+|++.... ............+.+++.+|||++++.++.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~----~~~~~~~~~~~~~~~i~~~DvA~~i~~ll~ 209 (236)
T 3qvo_A 134 GKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDII----DYELTSRNEPFKGTIVSRKSVAALITDIID 209 (236)
T ss_dssp -----------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCSCC----CCEEECTTSCCSCSEEEHHHHHHHHHHHHH
T ss_pred cccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCc----ceEEeccCCCCCCcEECHHHHHHHHHHHHc
Confidence 100 0011122345566778888899999999999999985321 111122222223457999999999999999
Q ss_pred CCCCCCCcEEEEEcCCC
Q 015570 172 NRSLSYCKVVEVIAETT 188 (404)
Q Consensus 172 ~~~~~~~~i~nI~~~~~ 188 (404)
++..+.+++|+|.++..
T Consensus 210 ~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 210 KPEKHIGENIGINQPGT 226 (236)
T ss_dssp STTTTTTEEEEEECSSC
T ss_pred CcccccCeeEEecCCCC
Confidence 98866799999999874
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-17 Score=158.79 Aligned_cols=174 Identities=16% Similarity=0.167 Sum_probs=131.9
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG 93 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~~ 93 (404)
..+++++.+|+.|.+++.++++++|+||||++... +.++.+|+++|+++| ++|||+ |+.+.....
T Consensus 55 ~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~ 120 (308)
T 1qyc_A 55 ASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQ-------------IESQVNIIKAIKEVGTVKRFFP-SEFGNDVDN 120 (308)
T ss_dssp TTTCEEECCCTTCHHHHHHHHHTCSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTS
T ss_pred hCCCEEEEeccCCHHHHHHHHcCCCEEEECCcchh-------------hhhHHHHHHHHHhcCCCceEee-cccccCccc
Confidence 35899999999999999999999999999998632 346789999999998 999984 665543211
Q ss_pred Cchhhccc-chHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCc--------cCcccEEEccCCccccCcccHHHHHH
Q 015570 94 FPAAILNL-FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY--------KETHNITLSQEDTLFGGQVSNLQVAE 164 (404)
Q Consensus 94 ~~~~~~~~-~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~--------~~~~~i~~~~~~~~~~~~Is~~DVA~ 164 (404)
.....+ ...| .+|..+|+++++.|++|++||+++|++..... ...+.+.+.+.+.....+|+++|||+
T Consensus 121 --~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 197 (308)
T 1qyc_A 121 --VHAVEPAKSVF-EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGT 197 (308)
T ss_dssp --CCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHH
T ss_pred --cccCCcchhHH-HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHH
Confidence 111122 3456 99999999999999999999999987632110 11223444444555567999999999
Q ss_pred HHHHHHhCCCCCCCcEEEEEcC-CCCCCccHHHHHHHcccccCCCC
Q 015570 165 LLACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 165 ai~~~l~~~~~~~~~i~nI~~~-~~~~~~si~ell~~i~~~~g~~~ 209 (404)
+++.++.++. ..+++|++.+. +. +++.|+++.+.+.+|.+.
T Consensus 198 ~~~~~l~~~~-~~~~~~~~~g~~~~---~s~~e~~~~~~~~~g~~~ 239 (308)
T 1qyc_A 198 FTIKAVDDPR-TLNKTLYLRLPANT---LSLNELVALWEKKIDKTL 239 (308)
T ss_dssp HHHTTSSCGG-GTTEEEECCCGGGE---EEHHHHHHHHHHHTTSCC
T ss_pred HHHHHHhCcc-ccCeEEEEeCCCCc---cCHHHHHHHHHHHhCCCC
Confidence 9999998765 45788888753 33 899999999999998653
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.1e-17 Score=157.38 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=130.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~~~ 94 (404)
.+++++.+|+.|.+++.++++++|+||||++... +.++++|+++|+++| ++|||+ |+.+.....
T Consensus 58 ~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~- 122 (318)
T 2r6j_A 58 LGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ-------------ILDQFKILEAIKVAGNIKRFLP-SDFGVEEDR- 122 (318)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG-------------STTHHHHHHHHHHHCCCCEEEC-SCCSSCTTT-
T ss_pred CCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh-------------hHHHHHHHHHHHhcCCCCEEEe-eccccCccc-
Confidence 5799999999999999999999999999998632 346799999999998 999985 655532211
Q ss_pred chhhccc-chHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCC-----CccCcccEEEccCCccccCcccHHHHHHHHHH
Q 015570 95 PAAILNL-FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTD-----AYKETHNITLSQEDTLFGGQVSNLQVAELLAC 168 (404)
Q Consensus 95 ~~~~~~~-~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~-----~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~ 168 (404)
.....+ ...| .+|..+|+++++.|++|++||+++|++... .....+.+.+...+.....+|+++|||++++.
T Consensus 123 -~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 200 (318)
T 2r6j_A 123 -INALPPFEALI-ERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIK 200 (318)
T ss_dssp -CCCCHHHHHHH-HHHHHHHHHHHHTTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred -ccCCCCcchhH-HHHHHHHHHHHhcCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHH
Confidence 111122 2456 999999999999999999999999876311 00122334444445556679999999999999
Q ss_pred HHhCCCCCCCcEEEEEcC-CCCCCccHHHHHHHcccccCCC
Q 015570 169 MAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 169 ~l~~~~~~~~~i~nI~~~-~~~~~~si~ell~~i~~~~g~~ 208 (404)
++.++. ..+++|++.+. +. +++.|+++.+.+.+|.+
T Consensus 201 ~l~~~~-~~~~~~~~~g~~~~---~s~~e~~~~~~~~~g~~ 237 (318)
T 2r6j_A 201 VATDPR-ALNRVVIYRPSTNI---ITQLELISRWEKKIGKK 237 (318)
T ss_dssp HTTCGG-GTTEEEECCCGGGE---EEHHHHHHHHHHHHTCC
T ss_pred HhcCcc-ccCeEEEecCCCCc---cCHHHHHHHHHHHhCCC
Confidence 998765 45788888743 43 89999999999999865
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-16 Score=163.90 Aligned_cols=183 Identities=12% Similarity=-0.008 Sum_probs=129.3
Q ss_pred EEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC---CCCCCcchhhHHHHHHHHHHH-HHhCCCCEEEEeccCcccCCCC
Q 015570 19 ELVECDLEKRVQIEPALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDA-ATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~---~~d~~~~~~vnv~~~~~Ll~A-a~~agVkrfI~vSS~gv~~~~~ 94 (404)
+.+.+|+.+ .+..++.++|+|||||+..... ..++..++++|+.++.+|+++ +++.++++|||+||.++++...
T Consensus 185 ~~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~ 262 (516)
T 3oh8_A 185 GKRFWDPLN--PASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDR 262 (516)
T ss_dssp TCEECCTTS--CCTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEE
T ss_pred cceeecccc--hhHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCC
Confidence 447788875 3467788999999999975321 223344678899999999999 6778999999999998876211
Q ss_pred c-----hhhcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCccCCCCCCcc-------CcccEEEccCCccccCcccH
Q 015570 95 P-----AAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYK-------ETHNITLSQEDTLFGGQVSN 159 (404)
Q Consensus 95 ~-----~~~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~~G~~~~~~-------~~~~i~~~~~~~~~~~~Is~ 159 (404)
. +........|+..|...|+++. ..|+++++||++++||++.... ..+.....+++...+.+|++
T Consensus 263 ~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v 342 (516)
T 3oh8_A 263 GDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAI 342 (516)
T ss_dssp EEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEH
T ss_pred CCCccCCCCCCCcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeH
Confidence 0 1111144578888888886654 5799999999999999864211 01111122334455679999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 160 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 160 ~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+|||++++.+++++.. +++||+++++. +++.|+++.+.+.+|.+
T Consensus 343 ~Dva~ai~~~l~~~~~--~g~~ni~~~~~---~s~~el~~~i~~~~g~~ 386 (516)
T 3oh8_A 343 DDLTDIYYRAIVDAQI--SGPINAVAPNP---VSNADMTKILATSMHRP 386 (516)
T ss_dssp HHHHHHHHHHHHCTTC--CEEEEESCSCC---EEHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHhCccc--CCcEEEECCCC---CCHHHHHHHHHHHhCCC
Confidence 9999999999998763 56999999875 99999999999999854
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-16 Score=146.94 Aligned_cols=160 Identities=18% Similarity=0.201 Sum_probs=121.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|++|.+++.++++++|+||||+|..... .++...+++|+.++.+++++|++.+++|||++||.+++...
T Consensus 63 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-- 139 (242)
T 2bka_A 63 KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGK-AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS-- 139 (242)
T ss_dssp GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHHH-HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--
T ss_pred CCceEEecCcCCHHHHHHHhcCCCEEEECCCccccc-CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC--
Confidence 478999999999999999999999999999975321 12345678899999999999999999999999999886532
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCC-EEEEEcCccCCCCCCccCcccE-E-E--ccC-CccccCcccHHHHHHHHHHH
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPGGMERPTDAYKETHNI-T-L--SQE-DTLFGGQVSNLQVAELLACM 169 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~-~tIlRpg~~~G~~~~~~~~~~i-~-~--~~~-~~~~~~~Is~~DVA~ai~~~ 169 (404)
...|+.+|..+|++++..+++ +++||||++||+.........+ . + ... ....+.+++++|||++++.+
T Consensus 140 ------~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~ 213 (242)
T 2bka_A 140 ------NFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNN 213 (242)
T ss_dssp ------SSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHH
T ss_pred ------cchHHHHHHHHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHH
Confidence 257999999999999999995 9999999999975432100000 0 0 000 00123579999999999999
Q ss_pred HhCCCCCCCcEEEEEcC
Q 015570 170 AKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 170 l~~~~~~~~~i~nI~~~ 186 (404)
+.++.. .+.+.+.++
T Consensus 214 ~~~~~~--~~~~~~~~~ 228 (242)
T 2bka_A 214 VVRPRD--KQMELLENK 228 (242)
T ss_dssp HTSCCC--SSEEEEEHH
T ss_pred HhCccc--cCeeEeeHH
Confidence 988763 346655544
|
| >3mhp_C TIC62_peptide, ferredoxin--NADP reductase, LEAF isozyme, chlorop; FNR, oxidoreductase, thylakoid membrane, proton-FLUX, poly P helix; HET: FAD; 1.70A {Pisum sativum} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.2e-16 Score=90.31 Aligned_cols=26 Identities=69% Similarity=1.188 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015570 311 SKARPLSPYFAYEDLKPPSSPSPTPS 336 (404)
Q Consensus 311 ~~~rplspy~~y~dlkpp~sp~p~~~ 336 (404)
+..||||||++|+||||||||+|++|
T Consensus 1 k~~rPlSpy~~Y~dlKPPsSPsPs~P 26 (26)
T 3mhp_C 1 KTEQPLSPYTAYDDLKPPSSPSPTKP 26 (26)
T ss_dssp CCCCCSSTTTTBTTSSCSSCSSCCCC
T ss_pred CCccccCccccccccCCCCCCCCCCC
Confidence 36799999999999999999999986
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-15 Score=143.96 Aligned_cols=173 Identities=12% Similarity=0.009 Sum_probs=124.0
Q ss_pred HHHHhCCCCEEEEcCcCCCCC-CCCC-----CcchhhHHHHHHHHHHHHHhCCCC--EEEEeccCcccCCCC-----chh
Q 015570 31 IEPALGNASVVICCIGASEKE-VFDI-----TGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNKFGF-----PAA 97 (404)
Q Consensus 31 l~~aL~gvDvVI~~ag~~~~~-~~d~-----~~~~~vnv~~~~~Ll~Aa~~agVk--rfI~vSS~gv~~~~~-----~~~ 97 (404)
....+.++|+|||+++..... ...+ ..++..|+.++.+|+++++..+++ +||+.|+.++++... +..
T Consensus 45 ~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~ 124 (298)
T 4b4o_A 45 AASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDS 124 (298)
T ss_dssp HHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTC
T ss_pred hHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccC
Confidence 345688999999999864221 1112 234678999999999999987654 588889988876432 122
Q ss_pred hcccchHHHHHHHHHHHHHH--HCCCCEEEEEcCccCCCCCCccC-------cccEEEccCCccccCcccHHHHHHHHHH
Q 015570 98 ILNLFWGVLLWKRKAEEALI--ASGLPYTIVRPGGMERPTDAYKE-------THNITLSQEDTLFGGQVSNLQVAELLAC 168 (404)
Q Consensus 98 ~~~~~~~y~~sK~~~E~~l~--~~gl~~tIlRpg~~~G~~~~~~~-------~~~i~~~~~~~~~~~~Is~~DVA~ai~~ 168 (404)
.......|...+...|.... ..++.++++|++.+||+++.... .+.....+.+...++|||++|++++++.
T Consensus 125 p~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~ 204 (298)
T 4b4o_A 125 PGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTH 204 (298)
T ss_dssp CCSCSSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHH
T ss_pred CccccchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHH
Confidence 33344456666555555443 46899999999999998653211 1122233455566789999999999999
Q ss_pred HHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 169 MAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 169 ~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+++++.. +++||+++++. +++.|+++.+.+.+|++
T Consensus 205 ~~~~~~~--~g~yn~~~~~~---~t~~e~~~~ia~~lgrp 239 (298)
T 4b4o_A 205 ALEANHV--HGVLNGVAPSS---ATNAEFAQTFGAALGRR 239 (298)
T ss_dssp HHHCTTC--CEEEEESCSCC---CBHHHHHHHHHHHHTCC
T ss_pred HHhCCCC--CCeEEEECCCc---cCHHHHHHHHHHHhCcC
Confidence 9998764 66999999985 99999999999999865
|
| >3mhp_C TIC62_peptide, ferredoxin--NADP reductase, LEAF isozyme, chlorop; FNR, oxidoreductase, thylakoid membrane, proton-FLUX, poly P helix; HET: FAD; 1.70A {Pisum sativum} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.2e-15 Score=86.09 Aligned_cols=26 Identities=69% Similarity=1.338 Sum_probs=23.9
Q ss_pred cCCCCCCCCccCCCCCCCCCCCCCCC
Q 015570 244 KVTDPLSPYTSYEDLKPPTSPTPTAP 269 (404)
Q Consensus 244 ~~~~p~~~~~~~~dlkpp~sp~P~~~ 269 (404)
++.||||||++|+||||||||+|+++
T Consensus 1 k~~rPlSpy~~Y~dlKPPsSPsPs~P 26 (26)
T 3mhp_C 1 KTEQPLSPYTAYDDLKPPSSPSPTKP 26 (26)
T ss_dssp CCCCCSSTTTTBTTSSCSSCSSCCCC
T ss_pred CCccccCccccccccCCCCCCCCCCC
Confidence 46899999999999999999999875
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3e-13 Score=128.10 Aligned_cols=181 Identities=15% Similarity=0.122 Sum_probs=130.9
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC---C-----CCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE---V-----FDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~---~-----~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
+++++.+|++|.+++.++++ ++|+|||++|..... . .++...+++|+.+..++++++.. .+
T Consensus 65 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 144 (278)
T 2bgk_A 65 VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK 144 (278)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence 79999999999999888775 899999999975321 0 12234567899999998888765 36
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccE--EE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNI--TL 146 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i--~~ 146 (404)
..+||++||..++.... .....|+.+|..+|.+++. .|+.+++||||+++++....... ..+ .+
T Consensus 145 ~~~iv~isS~~~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 219 (278)
T 2bgk_A 145 KGSIVFTASISSFTAGE-----GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEEL 219 (278)
T ss_dssp CEEEEEECCGGGTCCCT-----TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHH
T ss_pred CCeEEEEeeccccCCCC-----CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHh
Confidence 77999999987764321 1346799999999988863 58999999999999875332110 000 00
Q ss_pred -ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 147 -SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 147 -~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
.......+.+++.+|||++++.++.+.. ...|++|++.++.. +++.|+++.+.+.+
T Consensus 220 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~---~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 220 AHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT---RTNPAFPTALKHGL 277 (278)
T ss_dssp HHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG---GCCTHHHHHSCSCC
T ss_pred hhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCccc---ccCCccchhhhhhc
Confidence 0111123457899999999999997542 34588999998875 78888888887654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.47 E-value=4.3e-14 Score=127.96 Aligned_cols=140 Identities=13% Similarity=0.041 Sum_probs=109.3
Q ss_pred EEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 19 ELVECDLEKRVQIEPALG---NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
+++.+|+.|.+++.++++ ++|+|||++|..... ..++...+++|+.++.+|++++++.++.+||++||..+
T Consensus 45 ~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~ 124 (207)
T 2yut_A 45 RALPADLADELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPR 124 (207)
T ss_dssp EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHH
T ss_pred cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhh
Confidence 889999999999999887 899999999976321 12233457899999999999997777789999999876
Q ss_pred cCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHH
Q 015570 90 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV 162 (404)
Q Consensus 90 ~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DV 162 (404)
+... .....|+.+|..+|.+++. .|+.+++||||+++++... ..+...+.+++.+|+
T Consensus 125 ~~~~------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------~~~~~~~~~~~~~dv 188 (207)
T 2yut_A 125 YVQV------PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA----------PLGGPPKGALSPEEA 188 (207)
T ss_dssp HHSS------TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG----------GGTSCCTTCBCHHHH
T ss_pred ccCC------CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc----------ccCCCCCCCCCHHHH
Confidence 5332 3356899999999988864 5899999999999875311 112233568999999
Q ss_pred HHHHHHHHhCCC
Q 015570 163 AELLACMAKNRS 174 (404)
Q Consensus 163 A~ai~~~l~~~~ 174 (404)
|++++.++.++.
T Consensus 189 a~~~~~~~~~~~ 200 (207)
T 2yut_A 189 ARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHC--C
T ss_pred HHHHHHHHhCCC
Confidence 999999998765
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=6.8e-13 Score=123.91 Aligned_cols=167 Identities=10% Similarity=0.071 Sum_probs=118.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHHH----hCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAAT----IAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa~----~agVk 79 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.++.++++++. +.+.+
T Consensus 60 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~ 139 (255)
T 1fmc_A 60 GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG 139 (255)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence 468899999999999888775 8999999999764321 1223456789999888888774 45778
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccE-EEccCCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDT 151 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i-~~~~~~~ 151 (404)
+||++||...+... .....|+.+|..+|.+++. .|+.+++||||+++++.........+ .......
T Consensus 140 ~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 213 (255)
T 1fmc_A 140 VILTITSMAAENKN------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT 213 (255)
T ss_dssp EEEEECCGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTC
T ss_pred EEEEEcchhhcCCC------CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcC
Confidence 99999998775432 2346899999999988763 48999999999998753211100000 0001112
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
..+.+++.+|||++++.++.+.. +..+++|+|.++..
T Consensus 214 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (255)
T 1fmc_A 214 PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred CcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCcee
Confidence 23457899999999999997643 23478999988864
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-13 Score=128.68 Aligned_cols=165 Identities=15% Similarity=0.136 Sum_probs=117.7
Q ss_pred EEcCCCCHhhHHHHhC----CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHh----CCCCEEEEeccCcccCC
Q 015570 21 VECDLEKRVQIEPALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 21 V~gDl~d~~~l~~aL~----gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~----agVkrfI~vSS~gv~~~ 92 (404)
+.+|+.|.+++.++++ ++|+||||||.... ..++...+++|+.++.+|++++.. .+.+|||++||..++..
T Consensus 42 ~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 120 (255)
T 2dkn_A 42 LSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQP 120 (255)
T ss_dssp TTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGST
T ss_pred ccCCcccHHHHHHHHHHcCCCccEEEECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccc
Confidence 5678888888888875 89999999997642 234566788999999999997765 36789999999987653
Q ss_pred CCchh--------------------hcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--C--c
Q 015570 93 GFPAA--------------------ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--E--T 141 (404)
Q Consensus 93 ~~~~~--------------------~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~--~ 141 (404)
..... .......|+.+|..+|.+++. .|+.+++||||+++++..... . .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~ 200 (255)
T 2dkn_A 121 GAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY 200 (255)
T ss_dssp TGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT
T ss_pred cccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh
Confidence 31000 013556899999999988864 589999999999998632210 0 0
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.....+ ..+.+++.+|+|++++.++.+.. ...+++|++.++.
T Consensus 201 ~~~~~~~~~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 246 (255)
T 2dkn_A 201 GESTRRFVA-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGM 246 (255)
T ss_dssp HHHHHSCCC-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred HHHHHHHHH-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCe
Confidence 000000001 33468999999999999998652 2357899998875
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=4.6e-13 Score=127.36 Aligned_cols=179 Identities=13% Similarity=0.103 Sum_probs=115.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC----------CCCCCcchhhHHHHHHHHHHHHHhC--
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~----------~~d~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
.++.++.+|++|.+++..+++ ++|+|||+||..... ..++...+++|+.++.++++++...
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 137 (278)
T 1spx_A 58 QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS 137 (278)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 468899999999998888776 899999999975321 1123345678999998888877653
Q ss_pred --CCCEEEEeccCcc-cCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC--cccE
Q 015570 77 --KVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNI 144 (404)
Q Consensus 77 --gVkrfI~vSS~gv-~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--~~~i 144 (404)
+ .+||++||... .... .....|+.+|..++.+.+. .|+.+++||||+++++...... ....
T Consensus 138 ~~~-g~iv~isS~~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~ 210 (278)
T 1spx_A 138 STK-GEIVNISSIASGLHAT------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETS 210 (278)
T ss_dssp HHT-CEEEEECCTTSSSSCC------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-----------
T ss_pred hcC-CeEEEEecccccccCC------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhh
Confidence 6 79999999876 4321 2346799999999988763 5899999999999876432110 0000
Q ss_pred -------EEccCCccccCcccHHHHHHHHHHHHhCCC-C-CCCcEEEEEcCCCCCCccHHHHHHHcccc
Q 015570 145 -------TLSQEDTLFGGQVSNLQVAELLACMAKNRS-L-SYCKVVEVIAETTAPLTPMEELLAKIPSQ 204 (404)
Q Consensus 145 -------~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~-~~~~i~nI~~~~~~~~~si~ell~~i~~~ 204 (404)
.........+.+++.+|||++++.++.+.. + ..|++|++.++.. +++.++++.+.++
T Consensus 211 ~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~---~~~~~~~~~~~~~ 276 (278)
T 1spx_A 211 KKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS---LIMGLHCQDFAKL 276 (278)
T ss_dssp ---HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG---GC-----------
T ss_pred hhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcc---cccCcccccHHHH
Confidence 000000112357899999999999987543 1 3488999988875 7777777776654
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=123.43 Aligned_cols=179 Identities=11% Similarity=0.062 Sum_probs=123.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHH----HHHHHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQA----TKNLVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~----~~~Ll~Aa~~agV 78 (404)
.+++++.+|++|.+++..+++ ++|+|||+||..... ..++...+++|+.+ ++++++.+++.+.
T Consensus 51 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 130 (281)
T 3m1a_A 51 DRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGS 130 (281)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 579999999999998887765 899999999975321 12233456889999 6666666677788
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc------cE-
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH------NI- 144 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~------~i- 144 (404)
.+||++||....... .....|+.+|..+|.+.+. .|+.+++||||+++++........ .+
T Consensus 131 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 204 (281)
T 3m1a_A 131 GSVVNISSFGGQLSF------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYA 204 (281)
T ss_dssp EEEEEECCGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTH
T ss_pred CEEEEEcCccccCCC------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhH
Confidence 899999998765432 2357899999999988763 589999999999976532211000 00
Q ss_pred ------EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 145 ------TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 145 ------~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
...........+++.+|+|++++.++.++.. +..|+++++.. ..+.+.+..+.+..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~--~~~~~l~s~~~---~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 205 EKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEKT--PLRLALGGDAV---DFLTGHLDSVRAEL 266 (281)
T ss_dssp HHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSSC--CSEEEESHHHH---HHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCCC--CeEEecCchHH---HHHHHHHHHHHHHH
Confidence 0000011223478999999999999988763 67899988763 55555555555443
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.6e-12 Score=122.06 Aligned_cols=167 Identities=19% Similarity=0.111 Sum_probs=114.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC-------C-CEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC----C
Q 015570 16 EMLELVECDLEKRVQIEPALGN-------A-SVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA----K 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g-------v-DvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a----g 77 (404)
.+++++.+|+.|.+++.+++++ + |+|||+||..... ..++...+++|+.++.+|++++... +
T Consensus 63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 142 (264)
T 2pd6_A 63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNG 142 (264)
T ss_dssp -CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC
Confidence 5789999999999988877654 4 9999999976421 1223445788999999998887653 4
Q ss_pred -CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 78 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 78 -VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
..+||++||....... .....|+.+|..+|.+++. .|+.+++||||+++++...............
T Consensus 143 ~~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 216 (264)
T 2pd6_A 143 CRGSIINISSIVGKVGN------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITE 216 (264)
T ss_dssp CCEEEEEECCTHHHHCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGG
T ss_pred CCceEEEECChhhccCC------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHH
Confidence 5699999998653221 2346899999999887753 5899999999999987432111100111111
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
....+.+++.+|+|++++.++.+. .+..++++++.++..
T Consensus 217 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 256 (264)
T 2pd6_A 217 MIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLF 256 (264)
T ss_dssp GCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred hCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCce
Confidence 112234689999999999999753 334588999888863
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=7.2e-13 Score=123.25 Aligned_cols=165 Identities=15% Similarity=0.061 Sum_probs=114.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHH----HHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVD----AATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~----Aa~~agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.++.++++ .+++.++
T Consensus 57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 136 (248)
T 2pnf_A 57 VKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRW 136 (248)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTC
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999999888775 8999999999764211 1233457789999866555 4455677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
++||++||....... .....|+.+|..+|.+.+. .|+.+++||||+++++.................
T Consensus 137 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 210 (248)
T 2pnf_A 137 GRIVNISSVVGFTGN------VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQI 210 (248)
T ss_dssp EEEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTC
T ss_pred cEEEEEccHHhcCCC------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcC
Confidence 899999997543221 1246799999999887763 589999999999987643211000000000111
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
..+.+++.+|||++++.++.+. .+..+++|++.++
T Consensus 211 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 211 PLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 2245789999999999999764 3345789988776
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-12 Score=120.19 Aligned_cols=167 Identities=16% Similarity=0.079 Sum_probs=118.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCCC-C---------CCCcchhhHHHHHHHHHHHHHhC--
Q 015570 15 VEMLELVECDLEKRVQIEPALG------NASVVICCIGASEKEV-F---------DITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~~-~---------d~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
..+++++.+|++|.+++.++++ ++|+|||++|...... . ++...+++|+.++.++++++...
T Consensus 38 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 117 (242)
T 1uay_A 38 GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMR 117 (242)
T ss_dssp SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3567899999999999988876 8999999999753221 1 23345678999999999988653
Q ss_pred --C------CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc
Q 015570 77 --K------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET 141 (404)
Q Consensus 77 --g------VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~ 141 (404)
+ ..+||++||...+... .....|+.+|..+|.+++. .|+.+++||||+++++.......
T Consensus 118 ~~~~~~~~~~~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~ 191 (242)
T 1uay_A 118 ENPPDAEGQRGVIVNTASVAAFEGQ------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE 191 (242)
T ss_dssp TCCCCTTSCSEEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH
T ss_pred hcCCCCCCCCeEEEEeCChhhccCC------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccch
Confidence 1 1299999998765432 2346899999999887753 48999999999998753221110
Q ss_pred ccEEEccCCccc-cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 142 HNITLSQEDTLF-GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 142 ~~i~~~~~~~~~-~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
............ +.+++.+|+|++++.++.+ ....+++|++.++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~G~~~~v~gG~~ 238 (242)
T 1uay_A 192 KAKASLAAQVPFPPRLGRPEEYAALVLHILEN-PMLNGEVVRLDGALR 238 (242)
T ss_dssp HHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTCC
T ss_pred hHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC-CCCCCcEEEEcCCee
Confidence 000000111122 4578999999999999988 445688999988753
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.35 E-value=6.8e-12 Score=119.24 Aligned_cols=180 Identities=16% Similarity=0.120 Sum_probs=127.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC--------CCCCCcchhhHHHHHHHHHHHH----HhC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAA----TIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~--------~~d~~~~~~vnv~~~~~Ll~Aa----~~a 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++ ++.
T Consensus 57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 136 (271)
T 3tzq_B 57 RGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA 136 (271)
T ss_dssp TTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 468899999999998887765 899999999976321 1123345789999999998888 667
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEEcc
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQ 148 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~ 148 (404)
+..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++..... .........
T Consensus 137 ~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~ 210 (271)
T 3tzq_B 137 GGGAIVNISSATAHAAY------DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFA 210 (271)
T ss_dssp TCEEEEEECCGGGTSBC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHH
T ss_pred CCCEEEEECCHHHcCCC------CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHH
Confidence 77899999998765432 2346899999999988763 689999999999998644311 011111111
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHc
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKI 201 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i 201 (404)
.....+.+.+.+|||++++.++.+.. +..|+++++.++.......+.++....
T Consensus 211 ~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~ 264 (271)
T 3tzq_B 211 THHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGLLAHLPGLPQIRASV 264 (271)
T ss_dssp TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTBCTTHHHHHHHH
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCccccCCCccccCCcc
Confidence 22233457799999999999997643 345889999888433334455555543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.5e-12 Score=119.58 Aligned_cols=166 Identities=10% Similarity=0.050 Sum_probs=108.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC------CCCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~------~~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||++|.... ...++...+++|+.+..++++++. +.+.
T Consensus 55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 134 (247)
T 2hq1_A 55 INVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKS 134 (247)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 468999999999998887765 89999999997532 123455567889999877777664 4577
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..+|.+++. .|+.+++||||++.++.................
T Consensus 135 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 208 (247)
T 2hq1_A 135 GKIINITSIAGIIGN------AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNI 208 (247)
T ss_dssp EEEEEECC---------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTS
T ss_pred cEEEEEcChhhccCC------CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhC
Confidence 899999997542211 1246799999999988763 489999999999976421110000000011122
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+.+++.+|||++++.++.+. .+..+++|+|.++.
T Consensus 209 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 209 PLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence 2345789999999999998764 33357899998774
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.1e-12 Score=118.39 Aligned_cols=166 Identities=11% Similarity=0.060 Sum_probs=115.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC---------CCCCcchhhHHHHHHHHHHHH----Hh
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV---------FDITGPYRIDFQATKNLVDAA----TI 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~---------~d~~~~~~vnv~~~~~Ll~Aa----~~ 75 (404)
.+++++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+..++++++ ++
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (250)
T 2cfc_A 52 DKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL 131 (250)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 468999999999999888775 8999999999753221 122334678888876655554 45
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-cCcccE-EE
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KETHNI-TL 146 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~~~~~i-~~ 146 (404)
.+..+||++||....... .....|+.+|..+|.+++. .|+.+++||||+++++.... .....+ ..
T Consensus 132 ~~~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 205 (250)
T 2cfc_A 132 QGAGVIVNIASVASLVAF------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQ 205 (250)
T ss_dssp HTCEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHH
T ss_pred CCCCEEEEECChhhccCC------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHH
Confidence 577899999998765432 2346899999999988763 48999999999999875432 000000 00
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.......+.+++.+|+|++++.++.+.. +..++++++.++.
T Consensus 206 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 206 VLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp HHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence 0111223457899999999999997654 2347888887763
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=9.5e-13 Score=126.41 Aligned_cols=183 Identities=11% Similarity=0.097 Sum_probs=126.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh-----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI-----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~-----ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.++.++++++.. .+
T Consensus 76 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 155 (302)
T 1w6u_A 76 NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK 155 (302)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence 468999999999998887765 569999999965321 112344568899999888877743 35
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC--ccCcccE-EEc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA--YKETHNI-TLS 147 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~--~~~~~~i-~~~ 147 (404)
..+||++||..+.... .....|+.+|..+|.+.+. .|+.+++||||+++++... ....... ...
T Consensus 156 ~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 229 (302)
T 1w6u_A 156 GAAFLSITTIYAETGS------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEM 229 (302)
T ss_dssp CEEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHH
T ss_pred CCEEEEEcccccccCC------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHH
Confidence 5799999998664321 2346899999999988763 5899999999999875221 1010000 001
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
......+.+++.+|+|++++.++.+.. +..+++|++.++.. +++.++++.+.+..|.
T Consensus 230 ~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~---~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 230 IGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEE---VLISGEFNDLRKVTKE 287 (302)
T ss_dssp HTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH---HHHHSTTGGGGGCCHH
T ss_pred HhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCee---eccCCccccchhhccc
Confidence 111223457899999999999997543 23578999988864 7778888877776653
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=5.7e-12 Score=118.38 Aligned_cols=166 Identities=13% Similarity=0.100 Sum_probs=116.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------------CCCCCcchhhHHHHHHHHHHHHHhC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------------VFDITGPYRIDFQATKNLVDAATIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------------~~d~~~~~~vnv~~~~~Ll~Aa~~a 76 (404)
.++.++.+|+.|.+++.++++ ++|+|||++|..... ..++...+++|+.+..++++++...
T Consensus 58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 137 (265)
T 2o23_A 58 NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGE 137 (265)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 468999999999999888776 899999999976321 1123345678999999998887653
Q ss_pred ----------CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc
Q 015570 77 ----------KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK 139 (404)
Q Consensus 77 ----------gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~ 139 (404)
+..+||++||....... .....|+.+|..++.+.+. .|+.+++|+||++.++.....
T Consensus 138 ~~~~~~~~~~~~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 211 (265)
T 2o23_A 138 MGQNEPDQGGQRGVIINTASVAAFEGQ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL 211 (265)
T ss_dssp HTTSCCCTTSCCEEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----
T ss_pred HHhcccccCCCCcEEEEeCChhhcCCC------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc
Confidence 66799999998764322 2346899999998887753 589999999999987533211
Q ss_pred CcccEEEccCCccc-cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 140 ETHNITLSQEDTLF-GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 140 ~~~~i~~~~~~~~~-~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
.............. +.+++.+|||++++.++.+.. ..++++++.++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~-~~G~~i~vdgG~~ 260 (265)
T 2o23_A 212 PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPF-LNGEVIRLDGAIR 260 (265)
T ss_dssp -----CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTT-CCSCEEEESTTCC
T ss_pred CHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhcCc-cCceEEEECCCEe
Confidence 00000000011112 457899999999999997543 5688998887753
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.33 E-value=3.8e-12 Score=119.91 Aligned_cols=166 Identities=15% Similarity=0.109 Sum_probs=105.2
Q ss_pred CCeEEEEcCCCCHhhHHHHh--------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL--------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL--------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.+++++.+|+.|.+++.+++ .++|+|||+||..... ..++...+++|+.++.++++++ ++.+
T Consensus 63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 142 (266)
T 1xq1_A 63 FQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG 142 (266)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 46899999999998888776 5799999999975321 1123345688999999998888 4567
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccE-EEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i-~~~~~ 149 (404)
..+||++||..+.... .....|+.+|..+|.+++. .|+.+++||||+++++.........+ .....
T Consensus 143 ~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 216 (266)
T 1xq1_A 143 CGNIIFMSSIAGVVSA------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVIS 216 (266)
T ss_dssp SCEEEEEC----------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------
T ss_pred CcEEEEEccchhccCC------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHh
Confidence 8899999998764321 2245799999999988863 48999999999999864321100000 00011
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+++.+|||++++.++.+. .+..++++++.++.
T Consensus 217 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 255 (266)
T 1xq1_A 217 RKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGL 255 (266)
T ss_dssp -------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred cCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCc
Confidence 112234689999999999998754 23357889888874
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-12 Score=123.48 Aligned_cols=164 Identities=10% Similarity=0.013 Sum_probs=116.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC---CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA---KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a---gVk 79 (404)
.+++++.+|+.|.+++.++++ ++|+|||++|..... ..++...+++|+.++.++++++... + .
T Consensus 71 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~ 149 (274)
T 1ja9_A 71 AQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-G 149 (274)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-E
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-C
Confidence 468899999999999888776 899999999976321 1122345788999999999988764 4 6
Q ss_pred EEEEeccCccc-CCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc----------Cc
Q 015570 80 HFIMVSSLGTN-KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----------ET 141 (404)
Q Consensus 80 rfI~vSS~gv~-~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----------~~ 141 (404)
+||++||..++ ... .....|+.+|..+|.+++. .|+.+++||||+++++..... ..
T Consensus 150 ~iv~~sS~~~~~~~~------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 223 (274)
T 1ja9_A 150 RIILTSSIAAVMTGI------PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM 223 (274)
T ss_dssp EEEEECCGGGTCCSC------CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTC
T ss_pred EEEEEcChHhccCCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccC
Confidence 99999998765 321 2246799999999988863 489999999999987532100 00
Q ss_pred --cc-EEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 142 --HN-ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 142 --~~-i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.. ..........+.+++.+|||++++.++.+.. +..+++|+|.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 224 PQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp CHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred chHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 00 0001112223457899999999999997643 235789998876
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.8e-12 Score=120.34 Aligned_cols=165 Identities=14% Similarity=0.044 Sum_probs=112.1
Q ss_pred CeEE-EEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHH----HHHHHHHHHhCCC
Q 015570 17 MLEL-VECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQA----TKNLVDAATIAKV 78 (404)
Q Consensus 17 gvei-V~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~----~~~Ll~Aa~~agV 78 (404)
++.. +.+|+.|.+++.+++ .++|+|||+||..... ..++...+++|+.+ ++++++.+++.++
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 131 (245)
T 2ph3_A 52 PLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARF 131 (245)
T ss_dssp SCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC
Confidence 5666 999999998888775 4899999999976421 11233456788888 5555566666778
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
+|||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++.................
T Consensus 132 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 205 (245)
T 2ph3_A 132 GRIVNITSVVGILGN------PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQI 205 (245)
T ss_dssp EEEEEECCTHHHHCC------SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTC
T ss_pred CEEEEEeChhhccCC------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcC
Confidence 899999998553221 1246799999998887763 489999999999987532210000000000111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+++.+|+|++++.++.+.. +..+++|++.++.
T Consensus 206 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 206 PAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 22457899999999999997643 2347899888764
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.2e-12 Score=118.35 Aligned_cols=168 Identities=15% Similarity=0.092 Sum_probs=117.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCC-CCC------CCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASE-KEV------FDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~-~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
.+++++.+|++|.+++.++++ ++|+|||++|... ... .++...+++|+.++.++++++.. .+
T Consensus 62 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 141 (260)
T 3awd_A 62 HDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK 141 (260)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC
Confidence 468999999999998887765 7999999999754 111 11234467899999888887754 46
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC-ccCcccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETHNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~-~~~~~~i-~~~~ 148 (404)
..+||++||........ ......|+.+|..+|.+++. .|+.+++||||+++++... ......+ ....
T Consensus 142 ~~~iv~~sS~~~~~~~~----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 217 (260)
T 3awd_A 142 QGVIVAIGSMSGLIVNR----PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWI 217 (260)
T ss_dssp CEEEEEECCGGGTSCCS----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHH
T ss_pred CCEEEEEecchhcccCC----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHH
Confidence 77999999986643221 11236799999999988863 5899999999999987543 1000000 0001
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.....+.+++.+|||++++.++.+. ....+++|++.++.
T Consensus 218 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 218 AGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp HTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred hcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 1122345789999999999999754 33357899988874
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.31 E-value=2.2e-12 Score=119.71 Aligned_cols=166 Identities=13% Similarity=0.003 Sum_probs=114.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.++.++++++.. .+.
T Consensus 51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 130 (244)
T 1edo_A 51 GQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK 130 (244)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999999888775 799999999976431 112334568899998888887754 467
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++.................
T Consensus 131 ~~iv~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 204 (244)
T 1edo_A 131 GRIINIASVVGLIGN------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTI 204 (244)
T ss_dssp EEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSC
T ss_pred CEEEEECChhhcCCC------CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcC
Confidence 899999998653221 1246799999988877753 589999999999987532111000000001112
Q ss_pred cccCcccHHHHHHHHHHHHhCCC--CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS--LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~--~~~~~i~nI~~~~ 187 (404)
..+.+++.+|+|++++.++..+. +..+++|++.++.
T Consensus 205 ~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 205 PLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp TTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred CCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 22457899999999999985432 2347889888764
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.31 E-value=9.6e-12 Score=117.00 Aligned_cols=165 Identities=13% Similarity=0.111 Sum_probs=114.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC----------CCCCcchhhHHHHHHHHHHHHHhC--
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV----------FDITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~----------~d~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++...
T Consensus 53 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 132 (257)
T 3tpc_A 53 AAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMS 132 (257)
T ss_dssp --CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 468899999999998887765 8999999999863211 223445688999999998888652
Q ss_pred --------CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc
Q 015570 77 --------KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET 141 (404)
Q Consensus 77 --------gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~ 141 (404)
+..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+.......
T Consensus 133 ~~~~~~~~~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~ 206 (257)
T 3tpc_A 133 QGEPDADGERGVIVNTASIAAFDGQ------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ 206 (257)
T ss_dssp TSCCCTTSCCEEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------
T ss_pred hccccCCCCCeEEEEEechhhccCC------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH
Confidence 44589999998764332 2346899999999887652 68999999999998764321111
Q ss_pred ccEEEccCCccc-cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 142 HNITLSQEDTLF-GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 142 ~~i~~~~~~~~~-~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
............ +.+.+.+|||++++.++.+ .+..|+++++.++.
T Consensus 207 ~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~-~~itG~~i~vdGG~ 252 (257)
T 3tpc_A 207 DVQDALAASVPFPPRLGRAEEYAALVKHICEN-TMLNGEVIRLDGAL 252 (257)
T ss_dssp -------CCSSSSCSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTTC
T ss_pred HHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc-CCcCCcEEEECCCc
Confidence 111111112222 4578999999999999986 44568899988875
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.6e-12 Score=119.28 Aligned_cols=166 Identities=10% Similarity=0.040 Sum_probs=118.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.++.++++++ ++.+.
T Consensus 54 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~ 133 (246)
T 3osu_A 54 VDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRS 133 (246)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 468899999999998887765 8999999999864221 223345788999999999888 55566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++.................
T Consensus 134 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 207 (246)
T 3osu_A 134 GAIINLSSVVGAVGN------PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQI 207 (246)
T ss_dssp EEEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTC
T ss_pred CEEEEEcchhhcCCC------CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcC
Confidence 799999997654322 2346899999999888763 589999999999987543211111111111223
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.++.+.. +..|++|++.++.
T Consensus 208 p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 208 PLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 33457789999999999987653 2348899988774
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-11 Score=115.97 Aligned_cols=160 Identities=18% Similarity=0.151 Sum_probs=114.8
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHH----HHHHHhCCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNL----VDAATIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~L----l~Aa~~agVk 79 (404)
+++++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++ ++.+++.+..
T Consensus 54 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g 133 (260)
T 1nff_A 54 AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG 133 (260)
T ss_dssp GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 47899999999999888776 899999999976422 112334567888888555 4445566778
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||...+... .....|+.+|..++.+.+. .|+.+++||||+++++...... ..+ . ...
T Consensus 134 ~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~--~--~~~ 202 (260)
T 1nff_A 134 SIINISSIEGLAGT------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP-EDI--F--QTA 202 (260)
T ss_dssp EEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC-TTC--S--CCS
T ss_pred EEEEEeehhhcCCC------CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccch-hhH--H--hCc
Confidence 99999998765432 2246899999999988763 5899999999999886432110 111 0 112
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.+.+++.+|||++++.++.+.. +..+++|++.++.
T Consensus 203 ~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~ 238 (260)
T 1nff_A 203 LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT 238 (260)
T ss_dssp SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence 3457899999999999997543 2347899988885
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.30 E-value=8.4e-12 Score=117.61 Aligned_cols=165 Identities=12% Similarity=0.095 Sum_probs=113.1
Q ss_pred CeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHH----HHhCCCCE
Q 015570 17 MLELVECDLEKRVQIEPALG------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDA----ATIAKVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~A----a~~agVkr 80 (404)
+++++.+|++|.+++..+++ ++|+|||++|..... ..++...+++|+.+..+++++ +++.+..+
T Consensus 59 ~~~~~~~D~~~~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 138 (260)
T 2z1n_A 59 QVDIVAGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGR 138 (260)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEE
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence 78999999999999888876 699999999975321 112334567888888555554 44567789
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc----------cCccc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY----------KETHN 143 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~----------~~~~~ 143 (404)
||++||...+... .....|+.+|..++.+.+. .|+.+++||||+++++.... .....
T Consensus 139 iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 212 (260)
T 2z1n_A 139 MVYIGSVTLLRPW------QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE 212 (260)
T ss_dssp EEEECCGGGTSCC------TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC----------------
T ss_pred EEEECchhhcCCC------CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH
Confidence 9999998775432 2346899999999887763 48999999999998754320 00000
Q ss_pred -EEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 144 -ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 144 -i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..........+.+.+.+|||++++.++.+. .+..++++++.++.
T Consensus 213 ~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 213 ALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp -------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 010111112244679999999999999764 33457888887763
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-11 Score=116.80 Aligned_cols=164 Identities=11% Similarity=0.040 Sum_probs=118.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++ ++.+.
T Consensus 68 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 147 (260)
T 3un1_A 68 PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGS 147 (260)
T ss_dssp TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 478999999999998887765 899999999976322 1223445678999999988877 56677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||..+..... ......|+.+|..++.+.+. .|+.+.+|+||+++++..... .........
T Consensus 148 g~iv~isS~~~~~~~~----~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~ 220 (260)
T 3un1_A 148 GHIVSITTSLVDQPMV----GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---THSTLAGLH 220 (260)
T ss_dssp EEEEEECCTTTTSCBT----TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---GHHHHHTTS
T ss_pred cEEEEEechhhccCCC----CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---HHHHHhccC
Confidence 8999999986643211 12346799999999988863 489999999999998643211 111111223
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.+... .+..|++|+|.++.
T Consensus 221 p~~r~~~~~dva~av~~L~~~-~~itG~~i~vdGG~ 255 (260)
T 3un1_A 221 PVGRMGEIRDVVDAVLYLEHA-GFITGEILHVDGGQ 255 (260)
T ss_dssp TTSSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTTG
T ss_pred CCCCCcCHHHHHHHHHHhccc-CCCCCcEEEECCCe
Confidence 344578999999999999544 33568999998875
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=8.5e-12 Score=115.89 Aligned_cols=165 Identities=13% Similarity=0.068 Sum_probs=117.2
Q ss_pred CeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-CCEEE
Q 015570 17 MLELVECDLEKRVQIEPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFI 82 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag-VkrfI 82 (404)
+++++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+..++++++.. .+ ..+||
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv 132 (244)
T 3d3w_A 53 GIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIV 132 (244)
T ss_dssp TCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 67889999999999998886 5899999999753211 12334578899998888877754 35 67999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEccCCccc
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLF 153 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~~~~~~ 153 (404)
++||....... .....|+.+|..+|.+++. .|+.+++||||+++++..... ....+.........
T Consensus 133 ~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~ 206 (244)
T 3d3w_A 133 NVSSQCSQRAV------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL 206 (244)
T ss_dssp EECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTT
T ss_pred EeCchhhccCC------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCC
Confidence 99998765432 2346899999999988863 589999999999988643210 00000000111223
Q ss_pred cCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 154 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+.+++.+|+|++++.++.+.. ...+++|++.++.
T Consensus 207 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 3d3w_A 207 GKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 457899999999999997643 3357899988774
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-11 Score=114.75 Aligned_cols=165 Identities=12% Similarity=0.078 Sum_probs=109.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
++.++.+|++|.+++.++++ ++|+|||++|...... .++...+++|+.+..++++++ ++.+..
T Consensus 47 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g 126 (250)
T 2fwm_X 47 PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGG 126 (250)
T ss_dssp SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCC
Confidence 48899999999998887765 8999999999753211 223445678999998888877 455678
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-ccc-EE-EccC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THN-IT-LSQE 149 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~-i~-~~~~ 149 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++...... ... .. ....
T Consensus 127 ~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 200 (250)
T 2fwm_X 127 AIVTVASDAAHTPR------IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRG 200 (250)
T ss_dssp EEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------
T ss_pred EEEEECchhhCCCC------CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhh
Confidence 99999998765432 2346899999999988763 4899999999999876432110 000 00 0000
Q ss_pred -------CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 -------DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 -------~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+++.+|||++++.++.+. .+..++++.+.++.
T Consensus 201 ~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (250)
T 2fwm_X 201 FGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGS 246 (250)
T ss_dssp ---------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred hhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 112234689999999999999764 33457888887774
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.29 E-value=5.6e-12 Score=117.01 Aligned_cols=166 Identities=13% Similarity=0.004 Sum_probs=117.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----C-CCEE
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K-VNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----g-Vkrf 81 (404)
.+++++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.++.++++++... + ..+|
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~i 131 (244)
T 1cyd_A 52 PGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSI 131 (244)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence 467889999999999999886 5899999999753211 123345678999988888877553 5 5799
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccE-EEccCCcc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQEDTL 152 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i-~~~~~~~~ 152 (404)
|++||..++... .....|+.+|..+|.+++. .|+.+++||||+++++..... ....+ ........
T Consensus 132 v~~sS~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~ 205 (244)
T 1cyd_A 132 VNVSSMVAHVTF------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP 205 (244)
T ss_dssp EEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST
T ss_pred EEEcchhhcCCC------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC
Confidence 999998775432 2346799999999988863 589999999999998532210 00000 00011122
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.+.+++.+|+|++++.++.+.. ...++.+++.++.
T Consensus 206 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 1cyd_A 206 LRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 241 (244)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred ccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCc
Confidence 3568999999999999997643 3347788877763
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.28 E-value=2.2e-11 Score=113.40 Aligned_cols=166 Identities=11% Similarity=0.011 Sum_probs=113.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHH----HHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNL----VDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~L----l~Aa~~agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+..++ ++.+++.++
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~ 133 (251)
T 1zk4_A 54 DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL 133 (251)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Confidence 579999999999988887765 5999999999753221 12233567788766554 444556677
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---------HCCCCEEEEEcCccCCCCCCccCcccE-EEc
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNI-TLS 147 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---------~~gl~~tIlRpg~~~G~~~~~~~~~~i-~~~ 147 (404)
.+||++||...+... .....|+.+|..+|.+++ ..|+.+++||||+++++.......... ...
T Consensus 134 ~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 207 (251)
T 1zk4_A 134 GASIINMSSIEGFVGD------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQ 207 (251)
T ss_dssp CEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTS
T ss_pred CCEEEEeCCchhccCC------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHH
Confidence 799999998765432 234689999999987765 358999999999998753221100000 001
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
......+.+++.+|+|++++.++.+.. +..++++++.++.
T Consensus 208 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 248 (251)
T 1zk4_A 208 RTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY 248 (251)
T ss_dssp TTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence 111223457899999999999997643 3357889888774
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.28 E-value=5.9e-12 Score=113.58 Aligned_cols=146 Identities=12% Similarity=0.001 Sum_probs=107.8
Q ss_pred EEEcCCCCHhhHHHHhCC---CCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC---CCCEEEEeccC
Q 015570 20 LVECDLEKRVQIEPALGN---ASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSL 87 (404)
Q Consensus 20 iV~gDl~d~~~l~~aL~g---vDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a---gVkrfI~vSS~ 87 (404)
.+.+|+.|.+++.+++++ +|+||||+|...... .++...+++|+.++.+|++++... + .+||++||.
T Consensus 38 ~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~ 116 (202)
T 3d7l_A 38 DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGI 116 (202)
T ss_dssp SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCG
T ss_pred ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcch
Confidence 468999999999888764 899999999753221 112234578899999999999876 4 699999998
Q ss_pred cccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHH
Q 015570 88 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ 161 (404)
Q Consensus 88 gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~D 161 (404)
..+... .....|+.+|..+|.+++. .|+.+++||||+++++.... ......+.+++.+|
T Consensus 117 ~~~~~~------~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~---------~~~~~~~~~~~~~d 181 (202)
T 3d7l_A 117 MMEDPI------VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKL---------EPFFEGFLPVPAAK 181 (202)
T ss_dssp GGTSCC------TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHH---------GGGSTTCCCBCHHH
T ss_pred hhcCCC------CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhhh---------hhhccccCCCCHHH
Confidence 664432 2346899999999998874 38999999999998763321 11112346799999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEE
Q 015570 162 VAELLACMAKNRSLSYCKVVEV 183 (404)
Q Consensus 162 VA~ai~~~l~~~~~~~~~i~nI 183 (404)
||++++.++.+. ..+++|+|
T Consensus 182 va~~~~~~~~~~--~~G~~~~v 201 (202)
T 3d7l_A 182 VARAFEKSVFGA--QTGESYQV 201 (202)
T ss_dssp HHHHHHHHHHSC--CCSCEEEE
T ss_pred HHHHHHHhhhcc--ccCceEec
Confidence 999999988543 34678876
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.28 E-value=9.5e-12 Score=116.26 Aligned_cols=166 Identities=7% Similarity=-0.019 Sum_probs=112.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHH----HHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDA----ATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~A----a~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..+++++ +++.+.
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 133 (246)
T 2uvd_A 54 SDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRH 133 (246)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 468899999999998887765 899999999976422 112334567888886655554 445677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||++..+.................
T Consensus 134 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 207 (246)
T 2uvd_A 134 GRIVNIASVVGVTGN------PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLI 207 (246)
T ss_dssp EEEEEECCTHHHHCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTC
T ss_pred cEEEEECCHHhcCCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcC
Confidence 899999998653221 1246799999998877652 589999999999976532211000000000111
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+.+++.+|||++++.++.+. .+..++++++.++.
T Consensus 208 p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 208 PAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence 2245789999999999999754 33457888887763
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=9.3e-12 Score=117.09 Aligned_cols=167 Identities=13% Similarity=-0.007 Sum_probs=114.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHH----HHHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATK----NLVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~----~Ll~Aa~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+.. +++..+++.+.
T Consensus 51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 130 (254)
T 1hdc_A 51 DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGG 130 (254)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 358899999999998887765 899999999975321 1123345678887776 45556666677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++.................
T Consensus 131 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 204 (254)
T 1hdc_A 131 GSIVNISSAAGLMGL------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNT 204 (254)
T ss_dssp EEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTS
T ss_pred CEEEEECchhhccCC------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcC
Confidence 899999998765432 2346899999999988763 589999999999987532110000000000111
Q ss_pred cccCcc-cHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 152 LFGGQV-SNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 152 ~~~~~I-s~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
..+.+. +.+|||++++.++.+.. +..++++++.++..
T Consensus 205 p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 205 PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 223467 99999999999997643 34578898888753
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=7.1e-12 Score=118.06 Aligned_cols=168 Identities=15% Similarity=0.173 Sum_probs=116.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCC--CCC------CCCCCcchhhHHHHHHHHHHHH----HhC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGAS--EKE------VFDITGPYRIDFQATKNLVDAA----TIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~--~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~a 76 (404)
.+++++.+|++|.+++.++++ ++|+|||+||.. ... ..++...+++|+.+..++++++ ++.
T Consensus 57 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 136 (264)
T 3i4f_A 57 ERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ 136 (264)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc
Confidence 478999999999999887765 899999999942 111 1123345688999999998887 566
Q ss_pred CCCEEEEeccCccc-CCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEcc
Q 015570 77 KVNHFIMVSSLGTN-KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQ 148 (404)
Q Consensus 77 gVkrfI~vSS~gv~-~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~ 148 (404)
+..+||++||.+.. .... .....|+.+|..++.+.+. .|+.+++|+||+++++..............
T Consensus 137 ~~g~iv~iss~~~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~ 211 (264)
T 3i4f_A 137 NFGRIINYGFQGADSAPGW-----IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKE 211 (264)
T ss_dssp TCEEEEEECCTTGGGCCCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--
T ss_pred CCCeEEEEeechhcccCCC-----CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHh
Confidence 77799999998554 2221 2346899999999887762 589999999999987643211111011111
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
.....+.+.+.+|||++++.++.+.. +..|+++++.++-.
T Consensus 212 ~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~ 252 (264)
T 3i4f_A 212 HNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVD 252 (264)
T ss_dssp ------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCC
T ss_pred hcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCcee
Confidence 12233456899999999999997643 34588999988864
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=5.3e-12 Score=119.07 Aligned_cols=167 Identities=11% Similarity=-0.010 Sum_probs=117.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+.
T Consensus 57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 136 (263)
T 3ai3_A 57 VRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGG 136 (263)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 468899999999998887765 899999999975321 11233456788888888777764 4567
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-C---------c
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-E---------T 141 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~---------~ 141 (404)
.+||++||..++... .....|+.+|..++.+.+. .|+.+++||||+++++..... . .
T Consensus 137 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 210 (263)
T 3ai3_A 137 GAIIHNASICAVQPL------WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDW 210 (263)
T ss_dssp EEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCH
T ss_pred cEEEEECchhhcCCC------CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcH
Confidence 899999998775432 2246799999999888763 589999999999988632110 0 0
Q ss_pred ccE-EEccCC-ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 142 HNI-TLSQED-TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 142 ~~i-~~~~~~-~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
..+ ...... ...+.+++.+|||++++.++.+.. +..+++|++.++..
T Consensus 211 ~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~ 260 (263)
T 3ai3_A 211 KGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGML 260 (263)
T ss_dssp HHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCC
T ss_pred HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcc
Confidence 000 000000 123457899999999999997643 33578999888753
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=115.35 Aligned_cols=166 Identities=14% Similarity=0.042 Sum_probs=114.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag- 77 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+
T Consensus 57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 136 (261)
T 1gee_A 57 GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI 136 (261)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC
Confidence 468899999999998887765 899999999975321 11233456788888887776654 345
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~ 148 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++..... .........
T Consensus 137 ~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 210 (261)
T 1gee_A 137 KGTVINMSSVHEKIPW------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVE 210 (261)
T ss_dssp CCEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHH
T ss_pred CCEEEEeCCHHhcCCC------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHH
Confidence 6799999998764322 2356899999988877753 489999999999988643210 000000001
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.....+.+++.+|||++++.++.+. ....++++++.++.
T Consensus 211 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 250 (261)
T 1gee_A 211 SMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGM 250 (261)
T ss_dssp TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCc
Confidence 1112245789999999999999754 33357889888874
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=4.4e-11 Score=111.05 Aligned_cols=155 Identities=12% Similarity=0.043 Sum_probs=111.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+.
T Consensus 58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 137 (244)
T 2bd0_A 58 ALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS 137 (244)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence 468899999999998887765 799999999976321 11233456789999988888774 3467
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||..++... .....|+.+|..+|.+++. .|+.+++||||+++++....... ..
T Consensus 138 ~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~- 203 (244)
T 2bd0_A 138 GHIFFITSVAATKAF------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------EM- 203 (244)
T ss_dssp EEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------TT-
T ss_pred CEEEEEecchhcCCC------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-------cc-
Confidence 799999998775432 2346899999999987742 58999999999999864321110 00
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEc
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIA 185 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~ 185 (404)
...+++.+|+|++++.++.+.... .++++.+.+
T Consensus 204 -~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 237 (244)
T 2bd0_A 204 -QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPT 237 (244)
T ss_dssp -GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred -cccCCCHHHHHHHHHHHHhCCccccchheEEecc
Confidence 125789999999999999876533 234444433
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-11 Score=112.57 Aligned_cols=165 Identities=12% Similarity=0.061 Sum_probs=111.7
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHH----HHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDA----ATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~A----a~~agV 78 (404)
.+++++.+|++|.+++.+++ .++|+|||+||..... ..++...+++|+.+..+++++ +++.+.
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 133 (249)
T 2ew8_A 54 RRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGW 133 (249)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 46889999999998888764 4899999999976322 112334567898887777766 556677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC-ccCcc--cEEEcc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETH--NITLSQ 148 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~-~~~~~--~i~~~~ 148 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||++..+... ..... ......
T Consensus 134 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 207 (249)
T 2ew8_A 134 GRIINLTSTTYWLKI------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNM 207 (249)
T ss_dssp EEEEEECCGGGGSCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CT
T ss_pred eEEEEEcchhhccCC------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHh
Confidence 899999998765432 2346899999999988763 5899999999999875432 10000 000000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
. ...+.+++.+|||++++.++.+. .+..++++++.++.
T Consensus 208 ~-~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 208 L-QAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp T-SSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred h-CccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence 0 12345789999999999999754 33457888887774
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=2e-11 Score=113.94 Aligned_cols=166 Identities=15% Similarity=0.114 Sum_probs=112.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCC------CCCCCCcchhhHHHHHHHHHHHHH----hCCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~------~~~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI 82 (404)
.++.++.+|+.|.+.+.++++ ++|+|||+||.... ...++...+++|+.+..++++++. +.+..+||
T Consensus 60 ~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv 139 (249)
T 3f9i_A 60 DNYTIEVCNLANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRII 139 (249)
T ss_dssp SSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 478999999999999988876 78999999997532 123445567889999888877763 34567999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccC
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG 155 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~ 155 (404)
++||....... .....|+.+|..++.+.+. .|+.+.+|+||++..+...................+.
T Consensus 140 ~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~ 213 (249)
T 3f9i_A 140 NISSIVGIAGN------PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGT 213 (249)
T ss_dssp EECCCCC--CC------SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCS
T ss_pred EEccHHhccCC------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCC
Confidence 99998765432 2346799999999887763 5899999999999875332111100001111123345
Q ss_pred cccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 156 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 156 ~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+++.+|||++++.++.+.. +..|++|++.++.
T Consensus 214 ~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 246 (249)
T 3f9i_A 214 YGIPEDVAYAVAFLASNNASYITGQTLHVNGGM 246 (249)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence 7899999999999997653 3358899988874
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.9e-11 Score=115.55 Aligned_cols=168 Identities=15% Similarity=0.101 Sum_probs=118.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----KV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----gV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.++.++++++... +.
T Consensus 60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~ 139 (262)
T 3pk0_A 60 GKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGS 139 (262)
T ss_dssp SCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSS
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 578999999999998887764 8999999999764321 122334688999998888876553 77
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... ...+..|+.+|..++.+.+. .|+.+..|+||+++++.................
T Consensus 140 g~iv~isS~~~~~~~-----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 214 (262)
T 3pk0_A 140 GRVVLTSSITGPITG-----YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSI 214 (262)
T ss_dssp CEEEEECCSBTTTBC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTS
T ss_pred cEEEEEechhhccCC-----CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcC
Confidence 899999998653111 12346899999999988863 589999999999987532111111111111222
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
..+.+.+.+|||++++.++.+.. +..|++++|.++..
T Consensus 215 p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~ 252 (262)
T 3pk0_A 215 PAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQV 252 (262)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence 33456899999999999997543 34588998888753
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.25 E-value=6.7e-12 Score=118.32 Aligned_cols=167 Identities=13% Similarity=0.048 Sum_probs=118.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----C-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----g- 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.++.++++++... +
T Consensus 54 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 133 (259)
T 4e6p_A 54 PAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR 133 (259)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred CCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999999887775 8999999999863221 223445678999999988877542 2
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----------- 139 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----------- 139 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++.....
T Consensus 134 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 207 (259)
T 4e6p_A 134 GGKIINMASQAGRRGE------ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRP 207 (259)
T ss_dssp CEEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCC
T ss_pred CeEEEEECChhhccCC------CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCC
Confidence 3589999998765432 2346899999999988863 489999999999998643211
Q ss_pred CcccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 140 ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 140 ~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
..............+.+.+.+|||++++.++.... +..+++|+|.++..
T Consensus 208 ~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~ 257 (259)
T 4e6p_A 208 RGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNW 257 (259)
T ss_dssp TTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSS
T ss_pred hHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChh
Confidence 00001111112233457899999999999986543 33488999988853
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=7.5e-12 Score=117.45 Aligned_cols=172 Identities=10% Similarity=0.021 Sum_probs=117.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----C-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----g- 77 (404)
.+++++.+|+.|.+++.++++ .+|+|||++|...... .++...+++|+.++.++++++... +
T Consensus 64 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 143 (265)
T 1h5q_A 64 VKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ 143 (265)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC
Confidence 468999999999988877664 5899999999764221 122334678999999988887542 3
Q ss_pred CCEEEEeccCcccCCCCc-hhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFP-AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~-~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
..+||++||..+...... .........|+.+|..+|.+++. .|+.+++||||+++++...............
T Consensus 144 ~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 223 (265)
T 1h5q_A 144 KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQAS 223 (265)
T ss_dssp CEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHH
T ss_pred CceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHh
Confidence 469999999866432211 11122357899999999988863 4899999999999876432110000000011
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+++.+|+|++++.++.+. .+..+++|+|.++.
T Consensus 224 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 262 (265)
T 1h5q_A 224 NIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ 262 (265)
T ss_dssp TCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred cCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCE
Confidence 112235789999999999999764 33458899988874
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=116.65 Aligned_cols=166 Identities=11% Similarity=-0.010 Sum_probs=114.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHH----HHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKN----LVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~----Ll~Aa~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..+ ++..+++.+.
T Consensus 51 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~ 130 (255)
T 2q2v_A 51 VKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNW 130 (255)
T ss_dssp CCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 468889999999999888776 899999999975321 11233456778875555 4555567778
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccE-----
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNI----- 144 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i----- 144 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++....... ...
T Consensus 131 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 204 (255)
T 2q2v_A 131 GRIINIASVHGLVGS------TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPL 204 (255)
T ss_dssp EEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHH
T ss_pred cEEEEEcCchhccCC------CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchH
Confidence 899999998765432 2246799999999988763 58999999999998753211000 000
Q ss_pred ---EEc-cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 145 ---TLS-QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 145 ---~~~-~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
... ......+.+++.+|||++++.++.+.. +..+++|++.++.
T Consensus 205 ~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 252 (255)
T 2q2v_A 205 QAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGW 252 (255)
T ss_dssp HHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence 000 112233457899999999999987643 2347889887773
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.24 E-value=9.1e-11 Score=110.45 Aligned_cols=169 Identities=12% Similarity=0.034 Sum_probs=118.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH-----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA-----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa-----~~ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++ ++.+
T Consensus 55 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~ 134 (257)
T 3imf_A 55 GQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI 134 (257)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC
Confidence 578999999999988887764 889999999975321 1223445788999999988887 4445
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH--------HCCCCEEEEEcCccCCCCCCccC---cccEEE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKE---THNITL 146 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~--------~~gl~~tIlRpg~~~G~~~~~~~---~~~i~~ 146 (404)
..+||++||....... .....|+.+|..++.+.+ ..|+.+..|+||+++++...... ......
T Consensus 135 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~ 208 (257)
T 3imf_A 135 KGNIINMVATYAWDAG------PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKR 208 (257)
T ss_dssp CCEEEEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHH
T ss_pred CcEEEEECchhhccCC------CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHH
Confidence 6799999998765432 234679999998887765 24899999999999876432100 000000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAP 190 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~ 190 (404)
.......+.+.+.+|||++++.++.+.. +..|+++++.++....
T Consensus 209 ~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 209 TIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp HHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 1112223457899999999999997653 3458899988886533
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=115.83 Aligned_cols=167 Identities=11% Similarity=0.022 Sum_probs=117.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC--C-----CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK--E-----VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~--~-----~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++.++.+|+.|.+++..+++ ++|+|||+||.... . ..++...+++|+.+..++++++ ++.+
T Consensus 63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 142 (260)
T 2zat_A 63 LSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG 142 (260)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 468899999999988877665 89999999997421 1 1123345678988888877775 4567
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc--cCcccEEEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETHNITLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~--~~~~~i~~~~ 148 (404)
..+||++||...+... .....|+.+|..++.+.+. .|+.+++||||++..+.... ..........
T Consensus 143 ~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 216 (260)
T 2zat_A 143 GGSVLIVSSVGAYHPF------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMK 216 (260)
T ss_dssp CEEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHH
T ss_pred CCEEEEEechhhcCCC------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHH
Confidence 7899999998775432 2346899999999988863 48999999999998753211 0000000000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
.....+.+++.+|||++++.++.+.. +..+++++|.++..
T Consensus 217 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 257 (260)
T 2zat_A 217 ESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTA 257 (260)
T ss_dssp HHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred hcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcc
Confidence 11122357899999999999997643 33578999988864
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-11 Score=115.36 Aligned_cols=167 Identities=10% Similarity=0.031 Sum_probs=113.0
Q ss_pred Ce-EEEEcCCCCHhhHHHHh------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHH----HHhCCCC
Q 015570 17 ML-ELVECDLEKRVQIEPAL------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVN 79 (404)
Q Consensus 17 gv-eiV~gDl~d~~~l~~aL------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~A----a~~agVk 79 (404)
++ +++.+|+.|.+++.+++ .++|+|||+||...... .++...+++|+.+..+++++ +++.+..
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~ 137 (254)
T 2wsb_A 58 AVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAG 137 (254)
T ss_dssp GEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred cceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 45 88999999999888776 58999999999764321 11233456888886665554 4556778
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccEEEccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i~~~~~~ 150 (404)
+||++||........ ..+...|+.+|..+|.+++. .|+.+++||||+++++....... .........
T Consensus 138 ~iv~isS~~~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 213 (254)
T 2wsb_A 138 AIVNLGSMSGTIVNR----PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDM 213 (254)
T ss_dssp EEEEECCGGGTSCCS----SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHT
T ss_pred EEEEEecchhccCCC----CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhc
Confidence 999999987654321 12236899999999988763 48999999999998753211000 000000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
...+.+++.+|+|++++.++.+. .+..++++++.++.
T Consensus 214 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 214 TPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence 12245789999999999999654 33457888887763
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.9e-11 Score=113.00 Aligned_cols=166 Identities=12% Similarity=0.001 Sum_probs=112.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+.
T Consensus 55 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 134 (260)
T 1x1t_A 55 VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGF 134 (260)
T ss_dssp SCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 468899999999998887764 799999999975321 12234456789888888777764 4566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc----------
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET---------- 141 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~---------- 141 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||++.++.......
T Consensus 135 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 208 (260)
T 1x1t_A 135 GRIINIASAHGLVAS------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQ 208 (260)
T ss_dssp EEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------
T ss_pred CEEEEECcHHhCcCC------CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCch
Confidence 799999998764332 2346899999999988763 48999999999998764321100
Q ss_pred -ccEEEc-cCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 142 -HNITLS-QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 142 -~~i~~~-~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+... ......+.+++.+|||++++.++.+. .+..++++++.++.
T Consensus 209 ~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 209 ETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp ------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 000000 11112245789999999999999754 33457888887763
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.2e-11 Score=113.50 Aligned_cols=166 Identities=13% Similarity=0.080 Sum_probs=111.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHHHhC-----
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIA----- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa~~a----- 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++++++...
T Consensus 76 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 155 (272)
T 4e3z_A 76 GEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLY 155 (272)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGG
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhc
Confidence 468999999999988877664 78999999997642 1 1223445788999999988877543
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccEEE
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITL 146 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i~~ 146 (404)
+..+||++||........ ..+..|+.+|..++.+.+. .|+.+++|+||+++++....... .....
T Consensus 156 ~~~~g~iv~isS~~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~ 230 (272)
T 4e3z_A 156 SGQGGAIVNVSSMAAILGSA-----TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRARE 230 (272)
T ss_dssp TCCCEEEEEECCTHHHHCCT-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------
T ss_pred cCCCCEEEEEcchHhccCCC-----CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHH
Confidence 345899999986643211 1235799999999987753 48999999999998764321111 11111
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.........+.+.+|||++++.++.+.. +..|++|+|.++
T Consensus 231 ~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 231 MAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp ---CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence 1122233456789999999999997543 334788988776
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-11 Score=116.17 Aligned_cols=166 Identities=11% Similarity=0.030 Sum_probs=112.2
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.+++ .++|+|||+||...... .++...+++|+.+..++++++. +.+.
T Consensus 93 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 172 (285)
T 2c07_A 93 YESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRY 172 (285)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC
T ss_pred CceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence 46889999999999888776 47999999999764221 1233456788888766666554 5577
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..+|.+++. .|+.+++||||+++++.................
T Consensus 173 ~~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 246 (285)
T 2c07_A 173 GRIINISSIVGLTGN------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNI 246 (285)
T ss_dssp EEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTC
T ss_pred CEEEEECChhhccCC------CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhC
Confidence 899999998653321 1246799999999887753 489999999999987533211000000001111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+++.+|||++++.++.+.. ...+++|++.++.
T Consensus 247 ~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 247 PAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence 22357899999999999997643 2357888887763
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-11 Score=116.98 Aligned_cols=167 Identities=11% Similarity=0.075 Sum_probs=114.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-CC-------CCCCcchhhHHHH----HHHHHHHHHhC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-EV-------FDITGPYRIDFQA----TKNLVDAATIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~~-------~d~~~~~~vnv~~----~~~Ll~Aa~~a 76 (404)
.+++++.+|+.|.+++.++++ .+|+|||++|.... .. .++...+++|+.+ ++++++.+++.
T Consensus 83 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 162 (279)
T 3ctm_A 83 VHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN 162 (279)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 468899999999998887765 49999999997543 11 1122346788888 66778888877
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
+..+||++||....... .......|+.+|..+|.+++. .+ .+++|+||++..+...............
T Consensus 163 ~~~~iv~isS~~~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 237 (279)
T 3ctm_A 163 GKGSLIITSSISGKIVN----IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQ 237 (279)
T ss_dssp TCCEEEEECCCTTSCC-------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHH
T ss_pred CCCeEEEECchHhccCC----CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHH
Confidence 88899999998764321 113356899999999998863 46 8999999999875432111000000001
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+++.+|||++++.++.+. .+..+++++|.++.
T Consensus 238 ~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~ 276 (279)
T 3ctm_A 238 LTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGY 276 (279)
T ss_dssp HSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred hCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 112234789999999999999764 33457899888874
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=5e-11 Score=113.02 Aligned_cols=164 Identities=15% Similarity=0.037 Sum_probs=115.1
Q ss_pred CCeEEEEcCCCCH----hhHHHHhC-------CCCEEEEcCcCCCCCC-----------------CCCCcchhhHHHHHH
Q 015570 16 EMLELVECDLEKR----VQIEPALG-------NASVVICCIGASEKEV-----------------FDITGPYRIDFQATK 67 (404)
Q Consensus 16 ~gveiV~gDl~d~----~~l~~aL~-------gvDvVI~~ag~~~~~~-----------------~d~~~~~~vnv~~~~ 67 (404)
.++.++.+|++|. +++..+++ ++|+|||+||...... .++...+++|+.+..
T Consensus 62 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 141 (276)
T 1mxh_A 62 GSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141 (276)
T ss_dssp TCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHH
T ss_pred CceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHH
Confidence 4689999999999 88777664 8999999999753221 122345788999999
Q ss_pred HHHHHHHhC---CC------CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCcc
Q 015570 68 NLVDAATIA---KV------NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGM 131 (404)
Q Consensus 68 ~Ll~Aa~~a---gV------krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~ 131 (404)
++++++... +. .+||++||....... .....|+.+|..++.+.+. .|+.+++||||++
T Consensus 142 ~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v 215 (276)
T 1mxh_A 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLS 215 (276)
T ss_dssp HHHHHHHHTC-------CCCEEEEEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcc
Confidence 999988773 44 699999998765432 2346899999999988763 4899999999999
Q ss_pred CCCCCCccCcccEEEccCCccccC-cccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 132 ERPTDAYKETHNITLSQEDTLFGG-QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 132 ~G~~~~~~~~~~i~~~~~~~~~~~-~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+++ ...... ...........+. +++.+|||++++.++.+.. +..+++|++.++.
T Consensus 216 ~t~-~~~~~~-~~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 216 LLP-PAMPQE-TQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp SCC-SSSCHH-HHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCC-ccCCHH-HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence 987 211100 0000011112233 7899999999999997543 2347888887773
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.1e-12 Score=120.01 Aligned_cols=180 Identities=15% Similarity=0.112 Sum_probs=122.8
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.++.++++++.. .+-
T Consensus 64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~ 143 (281)
T 3svt_A 64 AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGG 143 (281)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 78999999999988877664 78999999997321 1 112344567899999998887654 344
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cc-ccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET-HNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~-~~i~~~~~ 149 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++..... .. ........
T Consensus 144 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 217 (281)
T 3svt_A 144 GSFVGISSIAASNTH------RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAM 217 (281)
T ss_dssp EEEEEECCHHHHSCC------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHH
T ss_pred cEEEEEeCHHHcCCC------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHh
Confidence 599999998765432 2246799999999988863 579999999999987533210 00 00000111
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCC-CccHHHHHHHcc
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAP-LTPMEELLAKIP 202 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~-~~si~ell~~i~ 202 (404)
....+.+.+.+|||++++.++.+.. +..+++|+|.++.... ..++.+++..+.
T Consensus 218 ~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~ 272 (281)
T 3svt_A 218 CTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVF 272 (281)
T ss_dssp HCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhcccccc
Confidence 1223456799999999999997643 3358899998887543 334555555443
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-11 Score=114.80 Aligned_cols=165 Identities=14% Similarity=0.055 Sum_probs=115.8
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-C
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-V 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag-V 78 (404)
++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .+ .
T Consensus 59 ~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~ 138 (263)
T 3ak4_A 59 GGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTK 138 (263)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC
T ss_pred CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 68899999999999888776 8999999999753211 12344567888888888777653 35 6
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-----c-----
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----T----- 141 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-----~----- 141 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++...... .
T Consensus 139 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 212 (263)
T 3ak4_A 139 GVIVNTASLAAKVGA------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTP 212 (263)
T ss_dssp CEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCH
T ss_pred eEEEEecccccccCC------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCc
Confidence 799999998764332 2346899999999888763 4899999999999875321100 0
Q ss_pred ccE-EEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 142 HNI-TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 142 ~~i-~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
... .........+.+++.+|||++++.++.+.. +..+++|++.++.
T Consensus 213 ~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 260 (263)
T 3ak4_A 213 EAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGV 260 (263)
T ss_dssp HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence 000 000111223457899999999999997643 3457899988874
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3.9e-12 Score=118.83 Aligned_cols=167 Identities=13% Similarity=0.045 Sum_probs=114.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcC-CCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGA-SEKEV------FDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~-~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
.+++++.+|+.|.+++.++++ ++|+|||+||. ..... .++...+++|+.++.++++++.. .+
T Consensus 57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 136 (258)
T 3afn_B 57 GDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAA 136 (258)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcc
Confidence 468999999999999888776 89999999996 32111 11233467888888888876542 22
Q ss_pred --C---CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE
Q 015570 78 --V---NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT 145 (404)
Q Consensus 78 --V---krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~ 145 (404)
. .+||++||....... ......|+.+|..+|.+++. .|+.+++||||+++++...........
T Consensus 137 ~~~~~~~~iv~~sS~~~~~~~-----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~ 211 (258)
T 3afn_B 137 KASGQTSAVISTGSIAGHTGG-----GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRD 211 (258)
T ss_dssp HHHTSCEEEEEECCTHHHHCC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHH
T ss_pred cCCCCCcEEEEecchhhccCC-----CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHH
Confidence 2 689999998664311 12346899999999988763 489999999999988643211000000
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC--CCCCcEEEEEcCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS--LSYCKVVEVIAET 187 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~--~~~~~i~nI~~~~ 187 (404)
........+.+++.+|+|++++.++.+.. +..+++|++.++.
T Consensus 212 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 212 RISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp HHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred HHhccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 01112233457899999999999997542 2357899988774
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.22 E-value=9.8e-11 Score=110.41 Aligned_cols=166 Identities=14% Similarity=0.084 Sum_probs=114.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC-----C
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA-----K 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a-----g 77 (404)
.+++++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++... +
T Consensus 73 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 152 (266)
T 3o38_A 73 GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH 152 (266)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC
T ss_pred CceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 589999999999988887764 7899999999754321 123345678999998888877543 5
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~~ 149 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..... ..........
T Consensus 153 ~~~iv~~sS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~ 226 (266)
T 3o38_A 153 GGVIVNNASVLGWRAQ------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLAS 226 (266)
T ss_dssp CEEEEEECCGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------
T ss_pred CeEEEEeCCHHHcCCC------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHh
Confidence 5689999998764332 2346899999999988763 589999999999987533211 1111112222
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+++.+|||++++.++.+. .+..|++++|.++.
T Consensus 227 ~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 227 DEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred cCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence 233455789999999999999764 33457889887763
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.7e-11 Score=111.41 Aligned_cols=166 Identities=17% Similarity=0.137 Sum_probs=114.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC------CCCCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~------~~~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
..+.++.+|+.|.+++.++++ .+|+|||+||.... ...++...+++|+.+..++++++.. .+.
T Consensus 59 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 138 (253)
T 2nm0_A 59 EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKK 138 (253)
T ss_dssp TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 458899999999988877664 57999999997532 2234555678999999888876643 467
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+.................
T Consensus 139 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 212 (253)
T 2nm0_A 139 GRVVLISSVVGLLGS------AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQV 212 (253)
T ss_dssp EEEEEECCCCCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTC
T ss_pred CEEEEECchhhCCCC------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcC
Confidence 799999998664321 2246799999999888763 589999999999976532110000000000111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+++.+|||++++.++.+.. +..++++.+.++.
T Consensus 213 p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~ 249 (253)
T 2nm0_A 213 PLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGL 249 (253)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence 22457899999999999997643 3457888887774
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.21 E-value=6.5e-11 Score=113.15 Aligned_cols=167 Identities=13% Similarity=0.030 Sum_probs=116.3
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 15 VEMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
..++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+
T Consensus 75 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 154 (281)
T 3v2h_A 75 SGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG 154 (281)
T ss_dssp SSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 3578999999999988887764 8999999999863321 223345788999999988876 4556
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc-------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN------- 143 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~------- 143 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++.........
T Consensus 155 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 228 (281)
T 3v2h_A 155 WGRIINIASAHGLVAS------PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGIT 228 (281)
T ss_dssp CEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------
T ss_pred CCEEEEECCcccccCC------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCC
Confidence 6799999998765332 2246899999999988763 5899999999999876432110000
Q ss_pred -----EEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 144 -----ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 144 -----i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..........+.+++.+|||++++.++.+.. +..|+++++.++.
T Consensus 229 ~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 229 EEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp -----------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 0011223344568999999999999997653 3357899887773
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=7.3e-11 Score=112.41 Aligned_cols=167 Identities=14% Similarity=0.104 Sum_probs=118.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.++.++++++ ++.+.
T Consensus 71 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 150 (281)
T 3s55_A 71 RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNY 150 (281)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 578999999999988887765 899999999976422 1223345678999999988885 44566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccEE-----
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNIT----- 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i~----- 145 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++....... ..+.
T Consensus 151 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 224 (281)
T 3s55_A 151 GRIVTVSSMLGHSAN------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEK 224 (281)
T ss_dssp EEEEEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------
T ss_pred CEEEEECChhhcCCC------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccc
Confidence 799999998765432 2346899999999988763 58999999999999875431000 0000
Q ss_pred ---------EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 146 ---------LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 146 ---------~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
+.......+.+++.+|||++++.++.+.. +.-|++++|.++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~ 277 (281)
T 3s55_A 225 PTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277 (281)
T ss_dssp CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence 00111122467899999999999997653 33488999988753
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.9e-11 Score=114.98 Aligned_cols=155 Identities=14% Similarity=0.112 Sum_probs=106.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHH----HHHHHHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQA----TKNLVDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~----~~~Ll~Aa~~agV 78 (404)
.++.++.+|+.|.+++..+++ ++|+|||++|...... .++...+++|+.+ ++++++.+++.++
T Consensus 83 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~ 162 (279)
T 1xg5_A 83 GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV 162 (279)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 458899999999998887765 8999999999753221 1233456788888 7778888888876
Q ss_pred --CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---------HCCCCEEEEEcCccCCCCCCc-cCcccEEE
Q 015570 79 --NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAY-KETHNITL 146 (404)
Q Consensus 79 --krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---------~~gl~~tIlRpg~~~G~~~~~-~~~~~i~~ 146 (404)
.+||++||..+.... .......|+.+|..++.+.+ ..|+.+++|+||++..+.... ........
T Consensus 163 ~~g~iv~isS~~~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~ 238 (279)
T 1xg5_A 163 DDGHIININSMSGHRVL----PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA 238 (279)
T ss_dssp CSCEEEEECCGGGTSCC----SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH
T ss_pred CCceEEEEcChhhcccC----CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHH
Confidence 799999998765321 12335689999999887664 257999999999997653110 00000000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
.. ......+++.+|||++++.++..+..
T Consensus 239 ~~-~~~~~~~~~~~dvA~~i~~l~~~~~~ 266 (279)
T 1xg5_A 239 AA-TYEQMKCLKPEDVAEAVIYVLSTPAH 266 (279)
T ss_dssp HH-HHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred hh-hcccccCCCHHHHHHHHHHHhcCCcc
Confidence 00 01122468999999999999987664
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=3.7e-11 Score=113.64 Aligned_cols=166 Identities=12% Similarity=0.040 Sum_probs=113.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHH----HHHHHhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNL----VDAATIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~L----l~Aa~~ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++ +..+++.+
T Consensus 64 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 143 (267)
T 1iy8_A 64 AEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG 143 (267)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 468899999999998887765 78999999997532 1 112334467788776654 44555667
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc----CcccEE-
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----ETHNIT- 145 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----~~~~i~- 145 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++..... ......
T Consensus 144 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~ 217 (267)
T 1iy8_A 144 SGMVVNTASVGGIRGI------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRK 217 (267)
T ss_dssp CCEEEEECCGGGTSBC------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHH
T ss_pred CCEEEEEcchhhccCC------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhh
Confidence 7899999998764321 2346899999999888763 589999999999987532110 000000
Q ss_pred ---EccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 146 ---LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 146 ---~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
........+.+.+.+|||++++.++.+. .+..++++++.++.
T Consensus 218 ~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 263 (267)
T 1iy8_A 218 AAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQ 263 (267)
T ss_dssp HHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 0111122345789999999999998754 23457888888775
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-11 Score=115.83 Aligned_cols=166 Identities=9% Similarity=0.010 Sum_probs=111.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHH----HHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVD----AATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~----Aa~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++ .+++.+.
T Consensus 73 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 152 (266)
T 3grp_A 73 KDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRY 152 (266)
T ss_dssp SSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 468999999999998887764 899999999976422 12344456789988555555 4455666
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+.................
T Consensus 153 g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 226 (266)
T 3grp_A 153 GRIINITSIVGVVGN------PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMI 226 (266)
T ss_dssp EEEEEECCC-------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTC
T ss_pred cEEEEECCHHHcCCC------CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcC
Confidence 799999998664322 2346799999998887763 589999999999986422111111111111222
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.++.+.. +..|++++|.++.
T Consensus 227 p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 227 PMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 33457789999999999997643 3458899887774
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=9.7e-11 Score=108.45 Aligned_cols=156 Identities=9% Similarity=-0.066 Sum_probs=104.8
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC---------CCCEEEEcCcCCC-CCC------CCCCcchhhHHHHHHHHHHHHHhC--
Q 015570 15 VEMLELVECDLEKRVQIEPALG---------NASVVICCIGASE-KEV------FDITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~---------gvDvVI~~ag~~~-~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
..+++++.+|++|.+++.++++ ++|+||||+|... ... .++...+++|+.+..++++++...
T Consensus 50 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 129 (250)
T 1yo6_A 50 DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLK 129 (250)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHH
T ss_pred CCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 3578999999999998888776 8999999999764 211 122345678888988888876543
Q ss_pred --------C-----CCEEEEeccCcccCCCCc-hhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCC
Q 015570 77 --------K-----VNHFIMVSSLGTNKFGFP-AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT 135 (404)
Q Consensus 77 --------g-----VkrfI~vSS~gv~~~~~~-~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~ 135 (404)
+ ..+||++||......... .........|+.+|..++.+++. .|+.+++||||++..+.
T Consensus 130 ~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (250)
T 1yo6_A 130 NAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209 (250)
T ss_dssp HHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred hcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence 4 679999999866433211 01113456899999999988863 48999999999997643
Q ss_pred CCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEEEEc
Q 015570 136 DAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIA 185 (404)
Q Consensus 136 ~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~nI~~ 185 (404)
... ..+++.+|+|+.++.++.+.... .++.+.+.+
T Consensus 210 ~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g 245 (250)
T 1yo6_A 210 GGK---------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL 245 (250)
T ss_dssp ------------------------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred CCC---------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence 210 13579999999999999876533 345554433
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-10 Score=107.60 Aligned_cols=150 Identities=11% Similarity=-0.052 Sum_probs=100.2
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHH----HHHHHHhCCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKN----LVDAATIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~----Ll~Aa~~agVk 79 (404)
+++++.+|+.|.+++.++++ ++|+|||++|...... .++...+++|+.+..+ +++.+++.+.+
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~ 130 (234)
T 2ehd_A 51 GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGG 130 (234)
T ss_dssp TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE
T ss_pred hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc
Confidence 78999999999988877654 7899999999753211 1233456788887764 45555667788
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||...+... .....|+.+|..++.+.+. .|+.+++||||++..+..... . ..
T Consensus 131 ~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~----~~- 194 (234)
T 2ehd_A 131 TIVNVGSLAGKNPF------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-----P----GQ- 194 (234)
T ss_dssp EEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------
T ss_pred EEEEECCchhcCCC------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-----c----cc-
Confidence 99999998765432 2346899999988877652 589999999999976432110 0 00
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEE
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEV 183 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI 183 (404)
+ .+++.+|||++++.++.++.....+.+.+
T Consensus 195 ~-~~~~~~dvA~~~~~l~~~~~~~~~g~~~~ 224 (234)
T 2ehd_A 195 A-WKLKPEDVAQAVLFALEMPGHAMVSEIEL 224 (234)
T ss_dssp ----CCHHHHHHHHHHHHHSCCSSCCCEEEC
T ss_pred c-CCCCHHHHHHHHHHHhCCCcccccceEEE
Confidence 1 15799999999999998765443333433
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.7e-11 Score=111.26 Aligned_cols=166 Identities=8% Similarity=0.001 Sum_probs=117.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++.. .+.
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 133 (247)
T 3lyl_A 54 FKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRW 133 (247)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 478999999999998887764 689999999986432 122334567899998888887643 455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+.................
T Consensus 134 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~ 207 (247)
T 3lyl_A 134 GRIISIGSVVGSAGN------PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKI 207 (247)
T ss_dssp EEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTS
T ss_pred eEEEEEcchhhccCC------CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcC
Confidence 699999998664322 2346899999988887763 589999999999987543221111111112223
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.++.+.. +..|++|++.++.
T Consensus 208 ~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~ 244 (247)
T 3lyl_A 208 PSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGM 244 (247)
T ss_dssp TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCE
Confidence 33457899999999999997543 3458899988774
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.20 E-value=9.6e-11 Score=110.95 Aligned_cols=166 Identities=13% Similarity=0.060 Sum_probs=116.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+++++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+.
T Consensus 75 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 154 (269)
T 3gk3_A 75 RDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRF 154 (269)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 578999999999988887664 8999999999764321 1233456789988888877764 3566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE-EccCC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQED 150 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~-~~~~~ 150 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+........... .....
T Consensus 155 g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~ 228 (269)
T 3gk3_A 155 GRIVNIGSVNGSRGA------FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQ 228 (269)
T ss_dssp EEEEEECCHHHHHCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGG
T ss_pred CEEEEeCChhhccCC------CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhc
Confidence 799999997654322 2346899999998887763 589999999999987543211111111 11112
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...+.+.+.+|||++++.++.+.. +..|++++|.++.
T Consensus 229 ~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~ 266 (269)
T 3gk3_A 229 IPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGM 266 (269)
T ss_dssp CTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTS
T ss_pred CCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCE
Confidence 233456799999999999997653 3458899988875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=3.4e-11 Score=113.41 Aligned_cols=166 Identities=14% Similarity=0.082 Sum_probs=116.4
Q ss_pred CCeEEEEcCCCCHhhHHHHh--------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL--------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL--------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.+++++.+|++|.+++.+++ .++|+|||+||..... ..++...+++|+.++.++++++ ++.+
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 137 (260)
T 2ae2_A 58 FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE 137 (260)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 36889999999998888776 5799999999975321 1123345678999999988877 4567
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-cCcccE-E---
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KETHNI-T--- 145 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~~~~~i-~--- 145 (404)
..+||++||....... .....|+.+|..+|.+.+. .|+.+++|+||+++.+.... ...... .
T Consensus 138 ~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 211 (260)
T 2ae2_A 138 RGNVVFISSVSGALAV------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLN 211 (260)
T ss_dssp SEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHH
T ss_pred CcEEEEEcchhhccCC------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHH
Confidence 7899999998764322 2246799999999988863 48999999999997642110 000000 0
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
........+.+++.+|||++++.++.... +..++++++.++.
T Consensus 212 ~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 254 (260)
T 2ae2_A 212 KLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 254 (260)
T ss_dssp HHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 01111223457899999999999987543 3457889888774
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-10 Score=111.02 Aligned_cols=171 Identities=13% Similarity=-0.047 Sum_probs=116.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCC----CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCc
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 88 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~----~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~g 88 (404)
.+++++.+|++|.+++.++++ ++|+|||+||.... ...++...+++|+.+..+|++++.....+|||++||..
T Consensus 62 ~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~ 141 (291)
T 3rd5_A 62 GQVEVRELDLQDLSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMA 141 (291)
T ss_dssp SEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGG
T ss_pred CCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechh
Confidence 478999999999999998886 67999999997532 23455667899999999999999988778999999987
Q ss_pred ccCCCCc-------hhhcccchHHHHHHHHHHHHHHH-------CC--CCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 89 TNKFGFP-------AAILNLFWGVLLWKRKAEEALIA-------SG--LPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 89 v~~~~~~-------~~~~~~~~~y~~sK~~~E~~l~~-------~g--l~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
....... ......+..|+.+|..++.+.+. .| +.+..|+||++..+..................
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 221 (291)
T 3rd5_A 142 HWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAAT 221 (291)
T ss_dssp GTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------
T ss_pred hccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHH
Confidence 6432110 01234556899999999887753 45 89999999999765332111000000000111
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
.+-..+.+|+|+.++.++.++ ...|+.+.+.++.
T Consensus 222 ~~~~~~~~~~A~~~~~l~~~~-~~~G~~~~vdgG~ 255 (291)
T 3rd5_A 222 RVVATDADFGARQTLYAASQD-LPGDSFVGPRFGY 255 (291)
T ss_dssp ---CHHHHHHHHHHHHHHHSC-CCTTCEEEETTSS
T ss_pred HHHhCCHHHHHHHHHHHHcCC-CCCCceeCCcccc
Confidence 111246899999999999885 4567788776543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.6e-11 Score=117.06 Aligned_cols=166 Identities=15% Similarity=0.100 Sum_probs=116.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC------
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA------ 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a------ 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.++.++++++...
T Consensus 71 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~ 150 (277)
T 2rhc_B 71 VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER 150 (277)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc
Confidence 468899999999988887765 7999999999753211 123445688999999999887654
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----C----
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----E---- 140 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-----~---- 140 (404)
+..+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++..... .
T Consensus 151 ~~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 224 (277)
T 2rhc_B 151 GTGRIVNIASTGGKQGV------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEV 224 (277)
T ss_dssp TEEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEECccccccCC------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhccccccc
Confidence 66799999998654321 2246799999999887763 489999999999987532100 0
Q ss_pred --cccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 141 --THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 141 --~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.............+.+++.+|||++++.++.+.. +..++++++.++.
T Consensus 225 ~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 225 STEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp CHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 0000000011123457899999999999997643 3457899988774
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-11 Score=115.16 Aligned_cols=166 Identities=10% Similarity=0.041 Sum_probs=115.9
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC----------CCCCCCcchhhHHHHHHHHHHHHHhCC--
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIAK-- 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~----------~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-- 77 (404)
++.++.+|++|.+++.++++ ++|+|||+||.... ...++...+++|+.+..++++++...-
T Consensus 59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 138 (261)
T 2wyu_A 59 GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE 138 (261)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence 47899999999998887765 78999999997532 112234457899999999999997651
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~~ 148 (404)
-.+||++||.+..... ..+..|+.+|..++.+.+. .|+.+++||||+++++....... ..+ ....
T Consensus 139 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 212 (261)
T 2wyu_A 139 GGGIVTLTYYASEKVV------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVA 212 (261)
T ss_dssp EEEEEEEECGGGTSBC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHH
T ss_pred CCEEEEEecccccCCC------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHH
Confidence 2489999997664321 2245799999999988763 48999999999998864321100 000 0000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
.....+.+.+.+|||++++.++.... +..+++|++.++..
T Consensus 213 ~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 253 (261)
T 2wyu_A 213 QTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (261)
T ss_dssp HHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcc
Confidence 01122346799999999999996533 23478999888753
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.1e-11 Score=115.49 Aligned_cols=168 Identities=15% Similarity=0.065 Sum_probs=117.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+.
T Consensus 91 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 170 (293)
T 3rih_A 91 GNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR 170 (293)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSS
T ss_pred CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 578999999999988776653 7899999999864321 123345688999999998887 45567
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... ......|+.+|..++.+.+. .|+.+..|+||+++++.................
T Consensus 171 g~iV~isS~~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 245 (293)
T 3rih_A 171 GRVILTSSITGPVTG-----YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSI 245 (293)
T ss_dssp CEEEEECCSBTTTBB-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTS
T ss_pred CEEEEEeChhhccCC-----CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcC
Confidence 899999998653111 12346899999999988763 589999999999987532111100011111222
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
..+.+...+|||++++.++.... +..|++++|.++..
T Consensus 246 p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~ 283 (293)
T 3rih_A 246 PMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQV 283 (293)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 33446789999999999997543 34588998888753
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=4.8e-11 Score=112.23 Aligned_cols=164 Identities=12% Similarity=0.015 Sum_probs=113.9
Q ss_pred EEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCCCEE
Q 015570 19 ELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHF 81 (404)
Q Consensus 19 eiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrf 81 (404)
.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+..+|
T Consensus 52 ~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~i 131 (256)
T 2d1y_A 52 AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAI 131 (256)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 789999999988877654 7899999999764221 1233456789999998887764 4567899
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc----C-cccE-EEcc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----E-THNI-TLSQ 148 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----~-~~~i-~~~~ 148 (404)
|++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+..... . .... ....
T Consensus 132 v~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~ 205 (256)
T 2d1y_A 132 VNVASVQGLFAE------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE 205 (256)
T ss_dssp EEECCGGGTSBC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH
T ss_pred EEEccccccCCC------CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHH
Confidence 999998664321 2346899999999988763 589999999999976421100 0 0000 0011
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
.....+.+++.+|||++++.++.+.. +..+++|++.++..
T Consensus 206 ~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~ 246 (256)
T 2d1y_A 206 DLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT 246 (256)
T ss_dssp TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 11223457899999999999997643 34578999888853
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=6.6e-11 Score=112.40 Aligned_cols=166 Identities=16% Similarity=0.091 Sum_probs=113.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh--------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 16 EMLELVECDLEKRVQIEPAL--------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL--------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
.++.++.+|+.|.+++.+++ .++|+|||+||...... .++...+++|+.+..++++++. +.+
T Consensus 70 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 149 (273)
T 1ae1_A 70 LNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ 149 (273)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 46889999999998888766 67999999999753221 1233345689999998888773 456
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-----cc-E
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HN-I 144 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-----~~-i 144 (404)
..+||++||...+... .....|+.+|..++.+.+. .|+.+++||||+++++....... .. .
T Consensus 150 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 223 (273)
T 1ae1_A 150 NGNVIFLSSIAGFSAL------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEI 223 (273)
T ss_dssp SEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHH
T ss_pred CcEEEEEcCHhhcCCC------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHH
Confidence 6799999998775432 2346899999999988763 48999999999998764321000 00 0
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.........+.+.+.+|||++++.++.... +..++++++.++.
T Consensus 224 ~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 267 (273)
T 1ae1_A 224 DNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGF 267 (273)
T ss_dssp HHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCc
Confidence 000001122346899999999999996543 3357889888774
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=5.9e-11 Score=112.73 Aligned_cols=163 Identities=13% Similarity=0.054 Sum_probs=116.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++ ++.+.
T Consensus 78 ~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 157 (269)
T 4dmm_A 78 GEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRS 157 (269)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 478899999999988887765 899999999986432 1233445788999988888876 34566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+....... .......
T Consensus 158 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~ 228 (269)
T 4dmm_A 158 GRIINIASVVGEMGN------PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA---EKLLEVI 228 (269)
T ss_dssp CEEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH---HHHGGGC
T ss_pred cEEEEECchhhcCCC------CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH---HHHHhcC
Confidence 799999998654321 2246799999998887753 58999999999998764321100 0011112
Q ss_pred cccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.++.++ .+..|++++|.++.
T Consensus 229 p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~ 266 (269)
T 4dmm_A 229 PLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGL 266 (269)
T ss_dssp TTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTS
T ss_pred CCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCe
Confidence 2345789999999999999873 23348899988774
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.18 E-value=4e-11 Score=112.72 Aligned_cols=165 Identities=12% Similarity=0.077 Sum_probs=116.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCC----------CCCCCCCcchhhHHHHHHHHHHHHHhC---
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGASE----------KEVFDITGPYRIDFQATKNLVDAATIA--- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~----------~~~~d~~~~~~vnv~~~~~Ll~Aa~~a--- 76 (404)
.+++++.+|++|.+++..+++ ++|+|||+||... ....++...+++|+.+..++++++...
T Consensus 52 ~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 131 (257)
T 3tl3_A 52 DRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAK 131 (257)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 578999999999998887775 8999999999752 122334556789999999998887642
Q ss_pred ---------CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC
Q 015570 77 ---------KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE 140 (404)
Q Consensus 77 ---------gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~ 140 (404)
+..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+......
T Consensus 132 ~~~~~~~~~~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 205 (257)
T 3tl3_A 132 TEPVGPNAEERGVIINTASVAAFDGQ------IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP 205 (257)
T ss_dssp SCCC--CCCCSEEEEEECCCC--CCH------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C
T ss_pred hcccccccCCCcEEEEEcchhhcCCC------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc
Confidence 33489999998765321 2346899999999887763 5899999999999875432111
Q ss_pred cccEEEccCCccc-cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 141 THNITLSQEDTLF-GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 141 ~~~i~~~~~~~~~-~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
............. +.+.+.+|||++++.++.+ .+..|+++++.++.
T Consensus 206 ~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~-~~itG~~i~vdGG~ 252 (257)
T 3tl3_A 206 EEARASLGKQVPHPSRLGNPDEYGALAVHIIEN-PMLNGEVIRLDGAI 252 (257)
T ss_dssp HHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTTC
T ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC-CCCCCCEEEECCCc
Confidence 0000000111112 4578999999999999987 44568899888774
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.18 E-value=4.8e-11 Score=111.88 Aligned_cols=165 Identities=13% Similarity=0.042 Sum_probs=116.1
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agVk 79 (404)
++..+.+|++|.+++.++++ ++|++||+||..... ..++...+++|+.+..++++++.. .+..
T Consensus 56 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g 135 (248)
T 3op4_A 56 NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQG 135 (248)
T ss_dssp GEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred cceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC
Confidence 46889999999998887765 899999999976432 123344578899999988887643 4667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..................
T Consensus 136 ~iv~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p 209 (248)
T 3op4_A 136 RIINVGSVVGTMGN------AGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVP 209 (248)
T ss_dssp EEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCT
T ss_pred EEEEEcchhhcCCC------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCC
Confidence 99999997654322 2346899999998887763 5899999999999765332111110111111223
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.+.+.+.+|||++++.++.+.. +..|+++++.++.
T Consensus 210 ~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 210 AGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence 3457899999999999997543 3358889888774
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=4.5e-11 Score=113.35 Aligned_cols=166 Identities=11% Similarity=0.093 Sum_probs=114.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++..+++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+.
T Consensus 71 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 150 (267)
T 1vl8_A 71 VETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN 150 (267)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSS
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 468889999999988877664 7999999999764221 122345678999998887766 34567
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-ccc-EEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THN-ITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~-i~~~~~ 149 (404)
.+||++||..+.... ......|+.+|..++.+.+. .|+.+++||||++..+...... ... ......
T Consensus 151 g~iv~isS~~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~ 225 (267)
T 1vl8_A 151 PSIINIGSLTVEEVT-----MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLK 225 (267)
T ss_dssp CEEEEECCGGGTCCC-----SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHH
T ss_pred cEEEEECCcchhccC-----CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHh
Confidence 899999998732211 12346899999999988763 5899999999999765321100 000 000001
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
....+.+++.+|||++++.++.+. .+..|+++.+.++
T Consensus 226 ~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 263 (267)
T 1vl8_A 226 RIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG 263 (267)
T ss_dssp TCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hCCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence 112345789999999999999764 3345788887776
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.18 E-value=6.9e-11 Score=111.29 Aligned_cols=167 Identities=13% Similarity=0.096 Sum_probs=119.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+..
T Consensus 61 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g 140 (256)
T 3gaf_A 61 GKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGG 140 (256)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 578999999999988887764 8999999999864321 223345688999999988876 455667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEEccCCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDT 151 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~~~~ 151 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..... ............
T Consensus 141 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 214 (256)
T 3gaf_A 141 AILNISSMAGENTN------VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT 214 (256)
T ss_dssp EEEEECCGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTC
T ss_pred EEEEEcCHHHcCCC------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcC
Confidence 99999998765432 2346899999999988863 589999999999986422100 000011111223
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
..+.+.+.+|||++++.++.+. .+..|++++|.++..
T Consensus 215 p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~ 252 (256)
T 3gaf_A 215 PLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGV 252 (256)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred CCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcc
Confidence 3345789999999999999754 334588999988864
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.2e-10 Score=106.30 Aligned_cols=165 Identities=13% Similarity=0.028 Sum_probs=111.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCC-CC------CCCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASE-KE------VFDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~-~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||... .. ..++...+++|+.+..++++++. +.+
T Consensus 46 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~ 125 (248)
T 3asu_A 46 DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN 125 (248)
T ss_dssp TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 368999999999999888764 7899999999752 11 11234457889888888877765 456
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCC-CCCCccCcccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMER-PTDAYKETHNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G-~~~~~~~~~~i~~~~~ 149 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.++.|+||++.| +...............
T Consensus 126 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~ 199 (248)
T 3asu_A 126 HGHIINIGSTAGSWPY------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK 199 (248)
T ss_dssp CCEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------
T ss_pred CceEEEEccchhccCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHH
Confidence 6799999998765332 2246899999999988763 489999999999984 4321000000000000
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
.......++.+|||++++.++.+.....++.+.+...
T Consensus 200 ~~~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 200 TYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPV 236 (248)
T ss_dssp -----CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred HHhccCCCCHHHHHHHHHHHhcCCccceeeEEEEccc
Confidence 0001124699999999999999876556777776654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.9e-11 Score=113.13 Aligned_cols=163 Identities=6% Similarity=-0.046 Sum_probs=91.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC---------CCCCCCcchhhHHHHHHHH----HHHHHh
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK---------EVFDITGPYRIDFQATKNL----VDAATI 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~---------~~~d~~~~~~vnv~~~~~L----l~Aa~~ 75 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... ...++...+++|+.+..++ +..+++
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 137 (253)
T 3qiv_A 58 GTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTK 137 (253)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 568899999999998887765 89999999997321 1122334578899995554 445555
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc-EEEc
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLS 147 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~-i~~~ 147 (404)
.+..+||++||...+.. ...|+.+|..++.+.+. .|+.+..|+||+++++......... ....
T Consensus 138 ~~~g~iv~isS~~~~~~---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~ 208 (253)
T 3qiv_A 138 RGGGAIVNQSSTAAWLY---------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDI 208 (253)
T ss_dssp HTCEEEEEECC--------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------
T ss_pred cCCCEEEEECCccccCC---------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHH
Confidence 66779999999876522 24699999999888763 4799999999999876432111111 1111
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
........+.+.+|||++++.++.+.. +..|++|++.++.
T Consensus 209 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 249 (253)
T 3qiv_A 209 VKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQ 249 (253)
T ss_dssp -----------CCHHHHHHHHHHSGGGTTCCSCEEEC----
T ss_pred hccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCe
Confidence 111222345678999999999997543 3358899988875
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.6e-10 Score=109.58 Aligned_cols=166 Identities=13% Similarity=0.031 Sum_probs=114.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+.
T Consensus 79 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 158 (271)
T 4iin_A 79 YKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRF 158 (271)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCC
Confidence 478999999999988887764 8999999999864321 1233456788888888777664 4466
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+.................
T Consensus 159 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~ 232 (271)
T 4iin_A 159 GSVVNVASIIGERGN------MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNI 232 (271)
T ss_dssp EEEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGC
T ss_pred CEEEEEechhhcCCC------CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcC
Confidence 799999998654322 2346899999999988763 689999999999976533211111111111222
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.++.+.. +..|+++++.++-
T Consensus 233 ~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 233 PLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence 33457899999999999997643 3458889887773
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=3.1e-11 Score=113.36 Aligned_cols=165 Identities=13% Similarity=0.045 Sum_probs=111.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHH----HHHHHhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNL----VDAATIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~L----l~Aa~~agV 78 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++ +..+++.+
T Consensus 52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~- 130 (253)
T 1hxh_A 52 ERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG- 130 (253)
T ss_dssp TTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-
Confidence 468899999999988877664 5799999999763221 12333456776655554 44555667
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------C--CCCEEEEEcCccCCCCCCc-cCcccEEE-c
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------S--GLPYTIVRPGGMERPTDAY-KETHNITL-S 147 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~--gl~~tIlRpg~~~G~~~~~-~~~~~i~~-~ 147 (404)
.+||++||....... .....|+.+|..++.+.+. . |+.+++||||+++++.... ........ .
T Consensus 131 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 204 (253)
T 1hxh_A 131 GSIINMASVSSWLPI------EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMV 204 (253)
T ss_dssp EEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHH
T ss_pred CEEEEEcchhhcCCC------CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHH
Confidence 899999998765432 2346899999999988763 3 8999999999998753211 00000000 0
Q ss_pred cC---CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QE---DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~---~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.. ....+.+.+.+|||++++.++.+.. +..++++++.++.
T Consensus 205 ~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 205 LHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp BCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred hhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence 01 1222346899999999999997653 3357888887774
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=4.3e-11 Score=112.91 Aligned_cols=166 Identities=12% Similarity=0.081 Sum_probs=117.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.++.++++++ ++.+.
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~ 133 (258)
T 3oid_A 54 VKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGG 133 (258)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 478999999999988877664 679999999965322 1123345788999998888877 45566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc--cEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--NITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~--~i~~~~~ 149 (404)
.+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+........ .......
T Consensus 134 g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 207 (258)
T 3oid_A 134 GHIVSISSLGSIRYL------ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQ 207 (258)
T ss_dssp EEEEEEEEGGGTSBC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHH
T ss_pred cEEEEECchhhCCCC------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHh
Confidence 799999998765432 2346899999999988863 489999999999976532211100 0000111
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
....+.+.+.+|||++++.++.+.. +..|++++|.++.
T Consensus 208 ~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~ 246 (258)
T 3oid_A 208 NTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGR 246 (258)
T ss_dssp HCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTG
T ss_pred cCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 1223457899999999999997653 3458899988875
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.6e-10 Score=106.83 Aligned_cols=163 Identities=10% Similarity=-0.024 Sum_probs=112.4
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHHH----hCCCCE
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAAT----IAKVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa~----~agVkr 80 (404)
++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+..+
T Consensus 72 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~ 151 (260)
T 3gem_A 72 GAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVAD 151 (260)
T ss_dssp TCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCE
T ss_pred CCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 57899999999988887664 7999999999764322 1223456789988888887764 456679
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcccc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 154 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~ 154 (404)
||++||....... .....|+.+|..++.+.+. .++.+..|+||++..+..... ............+
T Consensus 152 iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~--~~~~~~~~~~p~~ 223 (260)
T 3gem_A 152 IVHISDDVTRKGS------SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA--AYRANALAKSALG 223 (260)
T ss_dssp EEEECCGGGGTCC------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------CCSC
T ss_pred EEEECChhhcCCC------CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH--HHHHHHHhcCCCC
Confidence 9999998765432 2346899999999988763 469999999999976532211 1111111122233
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 155 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
.+...+|||++++.+++.. +..|++++|.++..
T Consensus 224 r~~~~edva~~v~~L~~~~-~itG~~i~vdGG~~ 256 (260)
T 3gem_A 224 IEPGAEVIYQSLRYLLDST-YVTGTTLTVNGGRH 256 (260)
T ss_dssp CCCCTHHHHHHHHHHHHCS-SCCSCEEEESTTTT
T ss_pred CCCCHHHHHHHHHHHhhCC-CCCCCEEEECCCcc
Confidence 4668999999999999543 35688999988853
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-10 Score=113.35 Aligned_cols=164 Identities=17% Similarity=0.132 Sum_probs=108.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.++.++++++ ++.+.
T Consensus 59 ~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~ 138 (324)
T 3u9l_A 59 VDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKH 138 (324)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 578999999999999888776 899999999975321 1223345689999999999888 56677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc------EE
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN------IT 145 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~------i~ 145 (404)
.+||++||.+...... .....|+.+|..+|.+.+. .|+.+++|+||+|.++......... ..
T Consensus 139 g~iV~isS~~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~ 213 (324)
T 3u9l_A 139 GLLIWISSSSSAGGTP-----PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQA 213 (324)
T ss_dssp EEEEEECCGGGTSCCC-----SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHH
T ss_pred CEEEEEecchhccCCC-----CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHH
Confidence 8999999987653221 2246799999999988763 5899999999999765432211100 00
Q ss_pred -EccCC-------------ccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEE
Q 015570 146 -LSQED-------------TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVI 184 (404)
Q Consensus 146 -~~~~~-------------~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~ 184 (404)
+.... .......+.+|||++++.+++.+.......+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g 266 (324)
T 3u9l_A 214 EYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVD 266 (324)
T ss_dssp HHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEEC
T ss_pred hhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeC
Confidence 00000 0001125789999999999987742233444443
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.16 E-value=9.7e-11 Score=112.69 Aligned_cols=166 Identities=14% Similarity=0.092 Sum_probs=118.4
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHHHhCCC--C
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIAKV--N 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa~~agV--k 79 (404)
.++.++.+|+.|.+++.+++ .++|+|||+||.... . ..++...+++|+.+..++++++...-. .
T Consensus 100 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g 179 (294)
T 3r3s_A 100 RKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGA 179 (294)
T ss_dssp CCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTC
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCC
Confidence 57889999999998877665 389999999997531 1 122344578999999999999876533 3
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc--cCcccEEEccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETHNITLSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~--~~~~~i~~~~~~ 150 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++.... .....+......
T Consensus 180 ~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 253 (294)
T 3r3s_A 180 SIITTSSIQAYQPS------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQ 253 (294)
T ss_dssp EEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTT
T ss_pred EEEEECChhhccCC------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhc
Confidence 99999998775432 2346799999999988763 58999999999998753110 001111111122
Q ss_pred ccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
...+.+...+|||++++.++.+. .+.-|++++|.++.
T Consensus 254 ~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 291 (294)
T 3r3s_A 254 TPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_dssp STTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 23345778999999999999754 33458899988875
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.4e-11 Score=112.45 Aligned_cols=165 Identities=15% Similarity=0.081 Sum_probs=114.7
Q ss_pred CeEEEEcCCCCHhhHHHH---hCCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCCCEEEE
Q 015570 17 MLELVECDLEKRVQIEPA---LGNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIM 83 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~a---L~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI~ 83 (404)
+++++.+|++|.+++..+ +.++|+|||+||..... ..++...+++|+.+..++++++. +.+..+||+
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~ 130 (246)
T 2ag5_A 51 GIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIIN 130 (246)
T ss_dssp TEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 789999999999988766 45899999999976432 11233456789988888888764 446779999
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-cC-----cccEEEccCC
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KE-----THNITLSQED 150 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~~-----~~~i~~~~~~ 150 (404)
+||........ .....|+.+|..+|.+.+. .|+.+++||||+++++.... .. ..........
T Consensus 131 isS~~~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 205 (246)
T 2ag5_A 131 MSSVASSVKGV-----VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR 205 (246)
T ss_dssp ECCSBTTTBCC-----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT
T ss_pred EechHhCcCCC-----CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhc
Confidence 99986643221 1346899999999988864 48999999999998753211 00 0000000011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...+.+++.+|||++++.++.+.. +..++++++.++
T Consensus 206 ~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG 242 (246)
T 2ag5_A 206 QKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG 242 (246)
T ss_dssp CTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred CCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 122346899999999999997543 345788888776
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.16 E-value=4.8e-11 Score=112.99 Aligned_cols=167 Identities=13% Similarity=0.081 Sum_probs=114.9
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 15 VEMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
..++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++.. .+
T Consensus 45 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 124 (264)
T 2dtx_A 45 EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR 124 (264)
T ss_dssp SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 3578999999999998887765 799999999975322 112344567899998887777653 46
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCcc-------Cc---
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYK-------ET--- 141 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~-------~~--- 141 (404)
..+||++||....... .....|+.+|..++.+.+. ..+.+++||||++..+..... ..
T Consensus 125 ~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 198 (264)
T 2dtx_A 125 DPSIVNISSVQASIIT------KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRI 198 (264)
T ss_dssp SCEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHH
T ss_pred CcEEEEECCchhccCC------CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhh
Confidence 6799999998765432 2346899999999988863 128999999999976421100 00
Q ss_pred -ccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 142 -HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 142 -~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
............+.+++.+|||++++.++.+.. +..++++++.++.
T Consensus 199 ~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 199 EKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 000000011122457899999999999997643 3457888887774
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-10 Score=110.66 Aligned_cols=166 Identities=11% Similarity=0.071 Sum_probs=107.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCC--C------CCCCCCcchhhHHHHHHHHHHHHHhC----
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASE--K------EVFDITGPYRIDFQATKNLVDAATIA---- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~--~------~~~d~~~~~~vnv~~~~~Ll~Aa~~a---- 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||... . ...++...+++|+.+..++++++...
T Consensus 79 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 158 (280)
T 4da9_A 79 ARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLAS 158 (280)
T ss_dssp CCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 578999999999988887765 8999999999731 1 11233445678999998888776532
Q ss_pred C---CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE-
Q 015570 77 K---VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT- 145 (404)
Q Consensus 77 g---VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~- 145 (404)
+ ..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+...........
T Consensus 159 ~~~~~g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~ 232 (280)
T 4da9_A 159 DARASRSIINITSVSAVMTS------PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGL 232 (280)
T ss_dssp CCCCCEEEEEECCC-------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------
T ss_pred CCCCCCEEEEEcchhhccCC------CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHH
Confidence 2 4589999998764322 2246799999999988763 589999999999987543211111011
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+.......+.+.+.+|||++++.++.+.. +..|++++|.++.
T Consensus 233 ~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 275 (280)
T 4da9_A 233 IESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGL 275 (280)
T ss_dssp ---------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTC
T ss_pred HhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 11112233457899999999999998654 3358899988874
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.16 E-value=7e-11 Score=111.11 Aligned_cols=166 Identities=16% Similarity=0.105 Sum_probs=115.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++.. .+.
T Consensus 53 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 132 (258)
T 3a28_C 53 QKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGV 132 (258)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC
Confidence 468999999999988887765 899999999975321 112344567899888888877754 366
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-c--------C-
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-K--------E- 140 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~--------~- 140 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+.... . .
T Consensus 133 ~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 206 (258)
T 3a28_C 133 KGKIINAASIAAIQGF------PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKP 206 (258)
T ss_dssp CCEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCC
T ss_pred CcEEEEECcchhccCC------CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCc
Confidence 799999998764322 2246899999999887763 58999999999997642110 0 0
Q ss_pred -cccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 141 -THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 141 -~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.............+.+.+.+|||++++.++.+.. +..++++++.++.
T Consensus 207 ~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 255 (258)
T 3a28_C 207 IGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM 255 (258)
T ss_dssp TTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred hHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence 0000000111122347899999999999997643 3457888887774
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=108.59 Aligned_cols=164 Identities=14% Similarity=0.029 Sum_probs=112.9
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agVk 79 (404)
+++++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++.. .+..
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g 129 (245)
T 1uls_A 50 GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG 129 (245)
T ss_dssp TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 48899999999988887664 589999999975321 112334567899999888877754 4667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||...... .....|+.+|..++.+.+. .|+.+++||||++..+..................
T Consensus 130 ~iv~isS~~~~~~-------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p 202 (245)
T 1uls_A 130 SIVLTASRVYLGN-------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATP 202 (245)
T ss_dssp EEEEECCGGGGCC-------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCT
T ss_pred EEEEEccchhcCC-------CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCC
Confidence 9999999873221 1246799999998877753 5899999999999765332110000000001112
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.+.+++.+|||++++.++.+.. +..++++.+.++.
T Consensus 203 ~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 238 (245)
T 1uls_A 203 LGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR 238 (245)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence 2347899999999999997643 3457888887774
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=4.1e-11 Score=112.29 Aligned_cols=166 Identities=12% Similarity=0.013 Sum_probs=114.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+.
T Consensus 63 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 142 (256)
T 3ezl_A 63 FDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGW 142 (256)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 478999999999988887765 7899999999764321 123345678999977776655 55566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+.+|+||++..+.................
T Consensus 143 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~ 216 (256)
T 3ezl_A 143 GRIINISSVNGQKGQ------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI 216 (256)
T ss_dssp EEEEEECCCCGGGSC------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHS
T ss_pred CEEEEEcchhhccCC------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcC
Confidence 799999998765432 2346899999998887752 589999999999976422111000000001111
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|+|++++.++... .+..|+++++.++.
T Consensus 217 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~ 253 (256)
T 3ezl_A 217 PVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL 253 (256)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCE
Confidence 2234679999999999999654 33458899988774
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.7e-10 Score=107.53 Aligned_cols=166 Identities=11% Similarity=0.004 Sum_probs=109.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC-------CCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALGN-------ASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g-------vDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++.++.+|++|.+++.++++. +|+|||+||.... . ..++...+++|+.+..++++++ ++.+
T Consensus 69 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~ 148 (272)
T 2nwq_A 69 TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG 148 (272)
T ss_dssp SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4789999999999999888754 5999999997532 1 1123345678888876665555 4556
Q ss_pred CC-EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 78 VN-HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 78 Vk-rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
.. +||++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+...............
T Consensus 149 ~g~~IV~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~ 222 (272)
T 2nwq_A 149 AGASIVNLGSVAGKWPY------PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDK 222 (272)
T ss_dssp TTCEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------
T ss_pred CCcEEEEeCCchhccCC------CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHH
Confidence 67 99999998765332 2246799999999988863 5799999999999865322100000000000
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
.......+..+|||++++.++.+.....++.+.|.++.
T Consensus 223 ~~~~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~~ 260 (272)
T 2nwq_A 223 TYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVS 260 (272)
T ss_dssp ---CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred hhccCCCCCHHHHHHHHHHHhCCCccCccceEEEeecc
Confidence 00011247999999999999987665556677766653
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=4e-11 Score=113.25 Aligned_cols=165 Identities=14% Similarity=0.081 Sum_probs=115.3
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-----------CCCCCCcchhhHHHHHHHHHHHHHhCC-
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIAK- 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-----------~~~d~~~~~~vnv~~~~~Ll~Aa~~ag- 77 (404)
+..++.+|++|.+++.++++ ++|+|||+||.... ...++...+++|+.++.++++++...-
T Consensus 60 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 139 (265)
T 1qsg_A 60 SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN 139 (265)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred CcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 34789999999998887765 78999999997542 112334567899999999999987642
Q ss_pred -CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-cc-EEEc
Q 015570 78 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN-ITLS 147 (404)
Q Consensus 78 -VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~-i~~~ 147 (404)
-.+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++....... .. ....
T Consensus 140 ~~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 213 (265)
T 1qsg_A 140 PGSALLTLSYLGAERAI------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHC 213 (265)
T ss_dssp EEEEEEEEECGGGTSBC------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHH
T ss_pred cCCEEEEEcchhhccCC------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHH
Confidence 2489999997664321 2235799999999988863 48999999999998864321100 00 0000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
......+.+++.+|+|++++.++.+.. +..+++|++.++.
T Consensus 214 ~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~ 254 (265)
T 1qsg_A 214 EAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 254 (265)
T ss_dssp HHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCc
Confidence 001122346899999999999997543 3347889888874
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=7.3e-11 Score=110.88 Aligned_cols=166 Identities=14% Similarity=0.011 Sum_probs=113.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .+
T Consensus 51 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 130 (256)
T 1geg_A 51 GHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH 130 (256)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999998887775 8999999999753211 12334567888888777666543 34
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----------- 139 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----------- 139 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++.....
T Consensus 131 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~ 204 (256)
T 1geg_A 131 GGKIINACSQAGHVGN------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKP 204 (256)
T ss_dssp CEEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECchhhcCCC------CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCC
Confidence 5799999998654322 2246799999999888763 589999999999987531100
Q ss_pred CcccEEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 140 ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 140 ~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..............+.+++.+|||++++.++.+. .+..++++.+.++.
T Consensus 205 ~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 253 (256)
T 1geg_A 205 LGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 253 (256)
T ss_dssp TTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 0000000011112245789999999999999764 33457888887774
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=8.7e-11 Score=112.81 Aligned_cols=166 Identities=10% Similarity=0.052 Sum_probs=114.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 15 VEMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
..+++++.+|+.|.+++.++++ ++|+||||||..... ..++...+++|+.++.++++++.. .+
T Consensus 71 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 150 (303)
T 1yxm_A 71 QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH 150 (303)
T ss_dssp CCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred CccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 3579999999999998887765 599999999964321 112334578899999999998755 23
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCC--CCccC--cccEEE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT--DAYKE--THNITL 146 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~--~~~~~--~~~i~~ 146 (404)
..+||++||...... .....|+.+|..++.+.+. .|+.+++||||+++++. ..... ...+..
T Consensus 151 ~~~iv~isS~~~~~~-------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 223 (303)
T 1yxm_A 151 GGSIVNIIVPTKAGF-------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEG 223 (303)
T ss_dssp CEEEEEECCCCTTCC-------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTT
T ss_pred CCeEEEEEeecccCC-------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHH
Confidence 568999999872211 1235799999988877752 48999999999999873 21110 000000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.......+.+++.+|||++++.++.+.. +..|+++++.++.
T Consensus 224 ~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~ 265 (303)
T 1yxm_A 224 SFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR 265 (303)
T ss_dssp GGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCe
Confidence 0011122347899999999999996543 3457889888875
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.15 E-value=8.7e-11 Score=112.18 Aligned_cols=165 Identities=13% Similarity=0.090 Sum_probs=114.0
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC----C------CCCCCcchhhHHHHHHHHHHHHHhCC--
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK----E------VFDITGPYRIDFQATKNLVDAATIAK-- 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~----~------~~d~~~~~~vnv~~~~~Ll~Aa~~ag-- 77 (404)
++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++++++...-
T Consensus 72 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 151 (285)
T 2p91_A 72 SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG 151 (285)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT
T ss_pred CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 47899999999988887664 78999999997532 0 11233456889999999999887642
Q ss_pred -CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-EEc
Q 015570 78 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLS 147 (404)
Q Consensus 78 -VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~ 147 (404)
..+||++||.+..... .....|+.+|..++.+.+. .|+.+++|+||+++++....... ..+ ...
T Consensus 152 ~~g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 225 (285)
T 2p91_A 152 RNGAIVTLSYYGAEKVV------PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHT 225 (285)
T ss_dssp SCCEEEEEECGGGTSBC------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHH
T ss_pred cCCEEEEEccchhccCC------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHH
Confidence 2699999997664321 2235799999999887763 58999999999998764321100 000 000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
......+.+.+.+|||++++.++.+.. +..|++|++.++.
T Consensus 226 ~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 226 TKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp HHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 001122346799999999999986533 2347888887774
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=2e-11 Score=115.33 Aligned_cols=164 Identities=12% Similarity=0.074 Sum_probs=112.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCCCCCCcchhhHHHHH----HHHHHHHHhCC---CCEE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQAT----KNLVDAATIAK---VNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~----~~Ll~Aa~~ag---Vkrf 81 (404)
.++.++.+|++|.+++.++++ ++|+|||+||... ..++...+++|+.+. +++++.+++.+ ..+|
T Consensus 58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~i 135 (267)
T 2gdz_A 58 QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGII 135 (267)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEE
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEE
Confidence 468899999999988887764 5799999999764 235566677887754 44555555543 5799
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---------HCCCCEEEEEcCccCCCCCCccC-c---ccEE-Ec
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKE-T---HNIT-LS 147 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---------~~gl~~tIlRpg~~~G~~~~~~~-~---~~i~-~~ 147 (404)
|++||....... .....|+.+|..++.+.+ ..|+.+++||||++.++...... . ..+. +.
T Consensus 136 v~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 209 (267)
T 2gdz_A 136 INMSSLAGLMPV------AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK 209 (267)
T ss_dssp EEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGH
T ss_pred EEeCCccccCCC------CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHH
Confidence 999998765432 223579999998887654 26899999999999764211000 0 0000 00
Q ss_pred c---CCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 148 Q---EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 148 ~---~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
. ......++++.+|||++++.++.+.. ..+++++|.++..
T Consensus 210 ~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~-~~G~~~~v~gg~~ 252 (267)
T 2gdz_A 210 DHIKDMIKYYGILDPPLIANGLITLIEDDA-LNGAIMKITTSKG 252 (267)
T ss_dssp HHHHHHHHHHCCBCHHHHHHHHHHHHHCTT-CSSCEEEEETTTE
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHhcCcC-CCCcEEEecCCCc
Confidence 0 00011246899999999999998765 5689999998864
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.3e-10 Score=109.93 Aligned_cols=164 Identities=13% Similarity=0.052 Sum_probs=116.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH-----hCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT-----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~-----~ag 77 (404)
.+++++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+
T Consensus 76 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 155 (267)
T 4iiu_A 76 GNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ 155 (267)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 578999999999998887765 8999999999864321 1234456889999999988763 456
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+.+|+||++..+...... .........
T Consensus 156 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~ 228 (267)
T 4iiu_A 156 GGRIITLSSVSGVMGN------RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEE-SALKEAMSM 228 (267)
T ss_dssp CEEEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCH-HHHHHHHHT
T ss_pred CcEEEEEcchHhccCC------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccH-HHHHHHHhc
Confidence 6799999997654322 2346799999988777652 5899999999999876432211 111111112
Q ss_pred ccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
...+.+.+.+|||++++.++.+. .+..|+++++.++
T Consensus 229 ~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 229 IPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 22345789999999999999764 3345788888776
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.5e-10 Score=107.46 Aligned_cols=167 Identities=14% Similarity=0.118 Sum_probs=115.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++++++ ++.+
T Consensus 77 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 156 (283)
T 3v8b_A 77 GQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG 156 (283)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 578999999999988877664 89999999997532 1 1123345788999999988887 5556
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-c------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-N------ 143 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~------ 143 (404)
..+||++||........ ......|+.+|..++.+.+. .|+.+..|+||++..+........ .
T Consensus 157 ~g~Iv~isS~~~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 232 (283)
T 3v8b_A 157 GGAIVVVSSINGTRTFT----TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIP 232 (283)
T ss_dssp CEEEEEECCSBTTTBCC----STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCC
T ss_pred CceEEEEcChhhccCCC----CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhh
Confidence 67999999986643110 12346899999999988863 579999999999986543211000 0
Q ss_pred EEEccCCccc--cCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 144 ITLSQEDTLF--GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 144 i~~~~~~~~~--~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.......... +.+...+|||++++.++.+.. +..|++++|.++
T Consensus 233 ~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 278 (283)
T 3v8b_A 233 VEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278 (283)
T ss_dssp CBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred hhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence 1111111112 346789999999999997543 345788888776
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.3e-11 Score=113.21 Aligned_cols=166 Identities=12% Similarity=0.040 Sum_probs=116.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+.
T Consensus 77 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 156 (270)
T 3ftp_A 77 LEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARG 156 (270)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 467899999999988887765 899999999976432 12234457889999999888774 3455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... ..+..|+.+|..++.+.+. .|+.+.+|+||++..+.................
T Consensus 157 g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 230 (270)
T 3ftp_A 157 GRIVNITSVVGSAGN------PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQI 230 (270)
T ss_dssp EEEEEECCHHHHHCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTC
T ss_pred CEEEEECchhhCCCC------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcC
Confidence 689999998654322 2346899999998887763 589999999999976422111000011111222
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.++... .+..|++++|.++.
T Consensus 231 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 267 (270)
T 3ftp_A 231 PLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGM 267 (270)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCc
Confidence 3345789999999999999654 33458899988775
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=9.1e-11 Score=111.93 Aligned_cols=167 Identities=12% Similarity=0.059 Sum_probs=116.5
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++.++.+|+.|.+++..++ .++|+|||+||..... ..++...+++|+.++.++++++... +..+
T Consensus 79 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~ 158 (283)
T 1g0o_A 79 SDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGR 158 (283)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCE
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCe
Confidence 46889999999998877665 3799999999976321 1233445789999999999998875 5679
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----C------cc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----E------TH 142 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-----~------~~ 142 (404)
||++||........ .....|+.+|..++.+.+. .|+.+++|+||++.++..... . ..
T Consensus 159 iv~isS~~~~~~~~-----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~ 233 (283)
T 1g0o_A 159 LILMGSITGQAKAV-----PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNE 233 (283)
T ss_dssp EEEECCGGGTCSSC-----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHH
T ss_pred EEEEechhhccCCC-----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHH
Confidence 99999986543211 1246799999999988763 589999999999987521100 0 00
Q ss_pred cEEEccC--CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 143 NITLSQE--DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 143 ~i~~~~~--~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....... ....+.+.+.+|||++++.++.+. .+..|+++++.++.
T Consensus 234 ~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 234 EVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp HHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 0000000 122334679999999999999754 33457888887763
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=2.2e-10 Score=107.34 Aligned_cols=164 Identities=11% Similarity=0.073 Sum_probs=108.1
Q ss_pred CeEEEEcCCC-CHhhHHHHhCCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHH----HHHHHhCCCCEEEEec
Q 015570 17 MLELVECDLE-KRVQIEPALGNASVVICCIGASEKEV------FDITGPYRIDFQATKNL----VDAATIAKVNHFIMVS 85 (404)
Q Consensus 17 gveiV~gDl~-d~~~l~~aL~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~L----l~Aa~~agVkrfI~vS 85 (404)
++.++ +|+. +.+.+.+.+.++|+|||+||...... .++...+++|+.+..++ ++.+++.+..+||++|
T Consensus 61 ~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~is 139 (249)
T 1o5i_A 61 HRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAIT 139 (249)
T ss_dssp SEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence 56677 9993 33444444558999999999753221 12234456787775554 5556666778999999
Q ss_pred cCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE-EccCCccccCcc
Q 015570 86 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQV 157 (404)
Q Consensus 86 S~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~-~~~~~~~~~~~I 157 (404)
|..++... .....|+.+|..++.+.+. .|+.+++||||+++++........... ........+.++
T Consensus 140 S~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~ 213 (249)
T 1o5i_A 140 SFSVISPI------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMA 213 (249)
T ss_dssp CGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCB
T ss_pred chHhcCCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCc
Confidence 98775432 2346899999999887753 589999999999988643210000000 011112234578
Q ss_pred cHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 158 SNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 158 s~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+.+|||++++.++.+.. +..+++|++.++.
T Consensus 214 ~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~ 244 (249)
T 1o5i_A 214 KPEEIASVVAFLCSEKASYLTGQTIVVDGGL 244 (249)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 99999999999997543 3347899888875
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=3.4e-10 Score=107.82 Aligned_cols=164 Identities=15% Similarity=0.043 Sum_probs=115.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag- 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+
T Consensus 77 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 156 (280)
T 3pgx_A 77 RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN 156 (280)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 578899999999998887764 8999999999864321 2233456789999988888763 333
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC----------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---------- 140 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~---------- 140 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++......
T Consensus 157 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 230 (280)
T 3pgx_A 157 GGSIVVVSSSAGLKAT------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPS 230 (280)
T ss_dssp CEEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGG
T ss_pred CCEEEEEcchhhccCC------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCch
Confidence 4689999998765432 2346899999999887763 5899999999999886543100
Q ss_pred -cccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 141 -THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 141 -~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...+.. ..... ..+++.+|||++++.++.+.. +..|++++|.++.
T Consensus 231 ~~~~~~~-~~~~~-~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 231 FVHSFPP-MPVQP-NGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp GGGGSCC-BTTBC-SSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hhhhhhh-cccCC-CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 000001 11111 247899999999999997543 3357888887764
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=4.6e-11 Score=113.84 Aligned_cols=166 Identities=13% Similarity=0.027 Sum_probs=117.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
.+++++.+|+.|.+++.++. .++|+|||+||...... .++...+++|+.+..++++++ ++.+..
T Consensus 79 ~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g 158 (273)
T 3uf0_A 79 GSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSG 158 (273)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 56899999999998877654 38999999999864321 223445788999998888876 445667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~~~ 150 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++.+..... ...........
T Consensus 159 ~IV~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 232 (273)
T 3uf0_A 159 RIVTIASMLSFQGG------RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITAR 232 (273)
T ss_dssp EEEEECCGGGTSCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHH
T ss_pred EEEEEcchHhcCCC------CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhc
Confidence 99999998765432 2346899999999988763 689999999999987532210 00000000111
Q ss_pred ccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
...+.+.+.+|||++++.++.+. .+..|++++|.++.
T Consensus 233 ~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~ 270 (273)
T 3uf0_A 233 IPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGW 270 (273)
T ss_dssp STTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence 22345789999999999999764 33458899888774
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=7.2e-11 Score=113.80 Aligned_cols=166 Identities=14% Similarity=0.114 Sum_probs=115.0
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC--------CCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~--------~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .+
T Consensus 79 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 158 (297)
T 1xhl_A 79 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK 158 (297)
T ss_dssp GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence 68999999999988887764 8999999999753211 12334567888888888777653 45
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC--c------c
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--T------H 142 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--~------~ 142 (404)
.+||++||........ .....|+.+|..++.+.+. .|+.+++||||+++++...... . .
T Consensus 159 -g~IV~isS~~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 232 (297)
T 1xhl_A 159 -GEIVNVSSIVAGPQAH-----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLY 232 (297)
T ss_dssp -CEEEEECCGGGSSSCC-----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHH
T ss_pred -CEEEEEcCchhccCCC-----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchH
Confidence 7999999987654320 2246799999999887763 5899999999999875321110 0 0
Q ss_pred -cEEEccCCccccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEEcCCC
Q 015570 143 -NITLSQEDTLFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAETT 188 (404)
Q Consensus 143 -~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~~~~~ 188 (404)
.+.........+.+++.+|||++++.++... .+..++++++.++..
T Consensus 233 ~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~ 281 (297)
T 1xhl_A 233 SFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 281 (297)
T ss_dssp HHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCcc
Confidence 0000011112345789999999999999653 334588999888864
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.13 E-value=7.9e-11 Score=112.40 Aligned_cols=166 Identities=11% Similarity=0.087 Sum_probs=116.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh------C
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI------A 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~------a 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .
T Consensus 73 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 152 (279)
T 3sju_A 73 HDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA 152 (279)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc
Confidence 578999999999988877664 7899999999764221 12334467899999999887654 4
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC---------
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--------- 140 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--------- 140 (404)
+..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+......
T Consensus 153 ~~g~iV~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 226 (279)
T 3sju_A 153 GWGRIVNIASTGGKQGV------MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGV 226 (279)
T ss_dssp TCEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCC
T ss_pred CCcEEEEECChhhccCC------CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccC
Confidence 66799999998765432 2246799999999888763 5899999999999764221000
Q ss_pred --cccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 141 --THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 141 --~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.............+.+.+.+|||++++.++.+.. +..|++++|.++.
T Consensus 227 ~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 227 TEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp CHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred ChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 0000011122233457899999999999997653 3457899888774
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-10 Score=108.80 Aligned_cols=165 Identities=13% Similarity=0.033 Sum_probs=110.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agVk 79 (404)
.+..+.+|+.|.+++.++++ ++|+|||++|..... ..++...+++|+.+..++++++. +.+..
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g 133 (247)
T 1uzm_A 54 GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG 133 (247)
T ss_dssp TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred HhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence 34458899999988877664 689999999975321 12334456789988888888764 45778
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+++||||++..+..................
T Consensus 134 ~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p 207 (247)
T 1uzm_A 134 RMIFIGSVSGLWGI------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIP 207 (247)
T ss_dssp EEEEECCCCC-----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCT
T ss_pred EEEEECCHhhccCC------CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCC
Confidence 99999998654321 2246799999998887763 5899999999999764211000000000001112
Q ss_pred ccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.+.+++.+|||++++.++.+. .+..++++++.++.
T Consensus 208 ~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~ 243 (247)
T 1uzm_A 208 AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243 (247)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence 234789999999999999754 33457889888774
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.1e-10 Score=109.61 Aligned_cols=168 Identities=11% Similarity=0.027 Sum_probs=118.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
.++.++.+|++|.+++..+++ ++|+|||+||.... . ..++...+++|+.+..++++++. +.+
T Consensus 57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 136 (280)
T 3tox_A 57 GEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG 136 (280)
T ss_dssp CCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 578999999999988887764 89999999996521 1 12234457889999888888764 445
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC---cc-cEEE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---TH-NITL 146 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~---~~-~i~~ 146 (404)
..+||++||....... ......|+.+|..++.+.+. .|+.+..|+||++..+...... .. ....
T Consensus 137 ~g~iv~isS~~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~ 211 (280)
T 3tox_A 137 GGSLTFTSSFVGHTAG-----FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGF 211 (280)
T ss_dssp CEEEEEECCSBTTTBC-----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHH
T ss_pred CCEEEEEcChhhCcCC-----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHH
Confidence 5699999998765221 12346799999999888763 5899999999999876432100 00 0011
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
.......+.+.+.+|||++++.++.+. .+..|++++|.++..
T Consensus 212 ~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~ 254 (280)
T 3tox_A 212 VEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGAS 254 (280)
T ss_dssp HHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HhccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcc
Confidence 112223345789999999999999764 334588999988864
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.12 E-value=7.1e-11 Score=111.00 Aligned_cols=165 Identities=13% Similarity=0.088 Sum_probs=112.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++++++ ++.+
T Consensus 50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 129 (254)
T 3kzv_A 50 DRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN 129 (254)
T ss_dssp GGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 368899999999988887764 79999999997532 1 1123345788999999988887 4545
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCccCcc---------c
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETH---------N 143 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~~~~---------~ 143 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+........ .
T Consensus 130 -g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 202 (254)
T 3kzv_A 130 -GNVVFVSSDACNMYF------SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQ 202 (254)
T ss_dssp -CEEEEECCSCCCCSS------CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHH
T ss_pred -CeEEEEcCchhccCC------CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHH
Confidence 699999998765432 2346899999999988863 589999999999987543211000 0
Q ss_pred EEEccCCccccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEEcCC
Q 015570 144 ITLSQEDTLFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAET 187 (404)
Q Consensus 144 i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~~~~ 187 (404)
..........+.+.+.+|+|++++.++.+. .+..|+++++.++.
T Consensus 203 ~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~ 248 (254)
T 3kzv_A 203 LKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA 248 (254)
T ss_dssp HHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred HHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence 000001111234678899999999999765 34457788766654
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-10 Score=110.09 Aligned_cols=154 Identities=12% Similarity=0.046 Sum_probs=108.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+.
T Consensus 59 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~ 138 (266)
T 3p19_A 59 PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNC 138 (266)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 478999999999988887765 8999999999863321 123344678999988866655 45677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE--EccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~--~~~~ 149 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+........... +...
T Consensus 139 g~IV~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 212 (266)
T 3p19_A 139 GTIINISSIAGKKTF------PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW 212 (266)
T ss_dssp CEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH
T ss_pred cEEEEEcChhhCCCC------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh
Confidence 899999998765432 2346799999999877752 589999999999987533211100000 0000
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
....+.+++.+|||++++.++.++..
T Consensus 213 ~~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 213 RVDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred cccccCCCCHHHHHHHHHHHHcCCCC
Confidence 01234578999999999999998763
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=6.8e-11 Score=111.95 Aligned_cols=166 Identities=12% Similarity=0.043 Sum_probs=115.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhCC--CCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAK--VNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~ag--Vkr 80 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++...- ..+
T Consensus 52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~ 131 (263)
T 2a4k_A 52 AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGS 131 (263)
T ss_dssp SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence 468899999999988877664 6799999999753211 1223456789999999999887632 359
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 153 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~ 153 (404)
||++||.... .. .....|+.+|..++.+.+. .|+.+++||||+++++...................
T Consensus 132 iv~isS~~~~--~~-----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~ 204 (263)
T 2a4k_A 132 LVLTGSVAGL--GA-----FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL 204 (263)
T ss_dssp EEEECCCTTC--CH-----HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTT
T ss_pred EEEEecchhc--CC-----CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCC
Confidence 9999998775 21 2346799999988877652 58999999999998753221100000000011122
Q ss_pred cCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 154 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
+.+++.+|||++++.++.+.. +..++++++.++..
T Consensus 205 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~ 240 (263)
T 2a4k_A 205 GRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRS 240 (263)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCcc
Confidence 347899999999999997643 34578888887753
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.12 E-value=9.9e-11 Score=108.82 Aligned_cols=166 Identities=14% Similarity=0.057 Sum_probs=112.1
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
++.++.+|+.| +++.+++ .++|+|||++|...... .++...+++|+.+..++++++ ++.+..
T Consensus 44 ~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g 122 (239)
T 2ekp_A 44 GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWG 122 (239)
T ss_dssp TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc
Confidence 37889999999 7766554 48999999999753211 123345678888888877776 445778
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cccE-EEccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI-TLSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~i-~~~~~~ 150 (404)
+||++||........ ......|+.+|..++.+.+. .|+.+++||||+++++...... ...+ ......
T Consensus 123 ~iv~isS~~~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 198 (239)
T 2ekp_A 123 RVLFIGSVTTFTAGG----PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITAR 198 (239)
T ss_dssp EEEEECCGGGTSCCT----TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTT
T ss_pred EEEEECchhhccCCC----CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhc
Confidence 999999987654321 12346899999999887763 4899999999999875321100 0000 000111
Q ss_pred ccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
...+.+.+.+|||++++.++.+. .+..++++++.++.
T Consensus 199 ~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 199 IPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp CTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred CCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 22345789999999999999754 33357888887763
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.12 E-value=7.7e-11 Score=109.92 Aligned_cols=168 Identities=12% Similarity=0.075 Sum_probs=119.1
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhC-----CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhCCC--CE
Q 015570 14 PVEMLELVECDLEKRVQIEPALG-----NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKV--NH 80 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~-----gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~agV--kr 80 (404)
...+++++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++...-. .+
T Consensus 42 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~ 121 (244)
T 4e4y_A 42 SAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGAS 121 (244)
T ss_dssp CCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEE
T ss_pred ccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcE
Confidence 34678999999999999888775 7899999999863221 12334578999999999999876422 38
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-----------
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH----------- 142 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~----------- 142 (404)
||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+........
T Consensus 122 iv~~sS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 195 (244)
T 4e4y_A 122 IVFNGSDQCFIAK------PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDE 195 (244)
T ss_dssp EEEECCGGGTCCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHH
T ss_pred EEEECCHHHccCC------CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHH
Confidence 9999998765432 2346899999999988863 589999999999976422110000
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...........+.+.+.+|||++++.++.+.. +..++++++.++.
T Consensus 196 ~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 241 (244)
T 4e4y_A 196 AQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGY 241 (244)
T ss_dssp HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCc
Confidence 00111122233457899999999999997643 3457888887763
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.11 E-value=5e-10 Score=106.29 Aligned_cols=170 Identities=12% Similarity=0.051 Sum_probs=118.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHh----CC-CCEE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATI----AK-VNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~----ag-Vkrf 81 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++.. .+ ..+|
T Consensus 74 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i 153 (278)
T 3sx2_A 74 SRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSI 153 (278)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEE
Confidence 578999999999998887765 899999999986432 223455678899999998888643 22 4589
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc----------ccE
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----------HNI 144 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~----------~~i 144 (404)
|++||......... .......|+.+|..++.+.+. .|+.+..|+||+++.+....... ...
T Consensus 154 v~isS~~~~~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 231 (278)
T 3sx2_A 154 VLISSSAGLAGVGS--ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDT 231 (278)
T ss_dssp EEECCGGGTSCCCC--SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC-
T ss_pred EEEccHHhcCCCcc--CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhh
Confidence 99999866432210 112346799999999988763 57999999999998764421100 000
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.........+.+++.+|||+++++++.+. .+..|++++|.++.
T Consensus 232 ~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 232 PGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp -CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred hhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 00111111245789999999999999754 33458899888774
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.11 E-value=9.6e-11 Score=111.68 Aligned_cols=165 Identities=10% Similarity=0.012 Sum_probs=112.8
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC-
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV- 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV- 78 (404)
++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+.
T Consensus 78 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~ 157 (276)
T 2b4q_A 78 DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA 157 (276)
T ss_dssp CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS
T ss_pred ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC
Confidence 78899999999988887664 799999999975321 11233456789888877766653 3444
Q ss_pred ---CEEEEeccCcccCCCCchhhcccch-HHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEc
Q 015570 79 ---NHFIMVSSLGTNKFGFPAAILNLFW-GVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLS 147 (404)
Q Consensus 79 ---krfI~vSS~gv~~~~~~~~~~~~~~-~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~ 147 (404)
.+||++||........ ... .|+.+|..++.+.+. .|+.+++|+||++..+.............
T Consensus 158 ~~~g~iV~isS~~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~ 231 (276)
T 2b4q_A 158 ENPARVINIGSVAGISAMG------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALE 231 (276)
T ss_dssp SSCEEEEEECCGGGTCCCC------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHH
T ss_pred CCCCEEEEECCHHHcCCCC------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHH
Confidence 7999999987653321 123 699999999988763 58999999999998754321000000000
Q ss_pred cC--CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QE--DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~--~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.. ....+.+++.+|||++++.++.+.. +..++++++.++.
T Consensus 232 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 232 ADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp HHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 01 1223457899999999999997643 3457888887763
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.1e-10 Score=107.67 Aligned_cols=167 Identities=12% Similarity=0.056 Sum_probs=109.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHHHhC----C
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIA----K 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa~~a----g 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++++++... +
T Consensus 55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 134 (261)
T 3n74_A 55 DAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENG 134 (261)
T ss_dssp TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 468999999999988887765 78999999997541 1 1123344678988888877776432 1
Q ss_pred ----CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC----cc
Q 015570 78 ----VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE----TH 142 (404)
Q Consensus 78 ----VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~----~~ 142 (404)
..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+...... ..
T Consensus 135 ~~~~~~~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~ 208 (261)
T 3n74_A 135 AKGQECVILNVASTGAGRPR------PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEE 208 (261)
T ss_dssp HTTCCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------
T ss_pred CCCCCeEEEEeCchhhcCCC------CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHH
Confidence 3479999998765432 2245799999999988763 5899999999999765322110 00
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
...........+.+++.+|||++++.++... .+..|+++++.++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~ 255 (261)
T 3n74_A 209 IRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRS 255 (261)
T ss_dssp --------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcc
Confidence 1111112223345789999999999999654 334588999988864
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.11 E-value=4.9e-10 Score=106.53 Aligned_cols=166 Identities=14% Similarity=0.113 Sum_probs=117.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++... +..+
T Consensus 81 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~ 160 (271)
T 3v2g_A 81 GRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGR 160 (271)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence 578899999999998887765 899999999976422 1223445788999999999988764 3469
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 153 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~ 153 (404)
||++||....... ......|+.+|..++.+.+. .|+.+..|+||++..+....... ...........
T Consensus 161 iv~isS~~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~ 234 (271)
T 3v2g_A 161 IITIGSNLAELVP-----WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD-HAEAQRERIAT 234 (271)
T ss_dssp EEEECCGGGTCCC-----STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS-SHHHHHHTCTT
T ss_pred EEEEeChhhccCC-----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch-hHHHHHhcCCC
Confidence 9999986543321 12346899999999988763 58999999999998764321110 00001111223
Q ss_pred cCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 154 GGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
+.+...+|||++++.++... .+..|++++|.++.
T Consensus 235 ~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 235 GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence 45679999999999999654 33458888887764
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.4e-10 Score=109.06 Aligned_cols=167 Identities=13% Similarity=0.076 Sum_probs=117.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+.
T Consensus 73 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~ 152 (277)
T 4dqx_A 73 SKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGG 152 (277)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTC
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 468899999999988887765 8999999999753221 1233446789999888877764 4456
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCC-CCc-cC-cccEEE--
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT-DAY-KE-THNITL-- 146 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~-~~~-~~-~~~i~~-- 146 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+. ... .. ......
T Consensus 153 g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 226 (277)
T 4dqx_A 153 GSIINTTSYTATSAI------ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRS 226 (277)
T ss_dssp EEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHH
T ss_pred cEEEEECchhhCcCC------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHH
Confidence 699999998765432 2346899999999988763 58999999999997643 100 00 000000
Q ss_pred -ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 147 -SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 147 -~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
.......+.+.+.+|||++++.++.+.. +..|+++++.++..
T Consensus 227 ~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 270 (277)
T 4dqx_A 227 DFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSS 270 (277)
T ss_dssp HHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchh
Confidence 1222334457899999999999997643 34588999988864
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.6e-10 Score=110.40 Aligned_cols=166 Identities=13% Similarity=0.042 Sum_probs=115.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+.
T Consensus 75 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 154 (277)
T 3gvc_A 75 CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGG 154 (277)
T ss_dssp SSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988877654 899999999986432 12233456789999888877764 3566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--c-cEEEc-
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--H-NITLS- 147 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~-~i~~~- 147 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+.+|+||+++++....... . .+...
T Consensus 155 g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 228 (277)
T 3gvc_A 155 GAIVNLSSLAGQVAV------GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGG 228 (277)
T ss_dssp EEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CC
T ss_pred cEEEEEcchhhccCC------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHh
Confidence 799999998765432 2346899999999988762 68999999999998753211000 0 00000
Q ss_pred cC---CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 148 QE---DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~---~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.. ....+.+.+.+|||++++.++.+. .+..|++++|.++.
T Consensus 229 ~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 272 (277)
T 3gvc_A 229 ARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGT 272 (277)
T ss_dssp HHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcc
Confidence 00 112245789999999999999754 33458899888875
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=111.46 Aligned_cols=166 Identities=11% Similarity=0.087 Sum_probs=119.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC-------CCCCCcchhhHHHHHHHHHHHHHhC--CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAATIA--KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVk 79 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++... +..
T Consensus 97 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g 176 (291)
T 3ijr_A 97 VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGD 176 (291)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence 578999999999988877664 799999999975321 1233456789999999999999874 335
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEEccCCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDT 151 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~~~~ 151 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++..... ....+.......
T Consensus 177 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 250 (291)
T 3ijr_A 177 VIINTASIVAYEGN------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNV 250 (291)
T ss_dssp EEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTS
T ss_pred EEEEEechHhcCCC------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccC
Confidence 99999998764332 2246799999999988763 489999999999987532110 011111112223
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
..+.+.+.+|||++++.++.+.. +..|++++|.++.
T Consensus 251 p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 287 (291)
T 3ijr_A 251 PMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGV 287 (291)
T ss_dssp TTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred CCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCc
Confidence 34457899999999999997643 3457889888774
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=7.8e-11 Score=111.37 Aligned_cols=165 Identities=14% Similarity=0.037 Sum_probs=116.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++++++.. .+
T Consensus 60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 139 (264)
T 3ucx_A 60 RRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK 139 (264)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 578999999999998887664 78999999987421 1 122334578899999998887643 34
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC----------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---------- 140 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~---------- 140 (404)
.+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||+++++......
T Consensus 140 -g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 212 (264)
T 3ucx_A 140 -GAVVNVNSMVVRHSQ------AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTS 212 (264)
T ss_dssp -CEEEEECCGGGGCCC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCC
T ss_pred -CEEEEECcchhccCC------CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCC
Confidence 699999998765432 2346899999999887763 6899999999999875321100
Q ss_pred -cccEEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 141 -THNITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 141 -~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.............+.+.+.+|||++++.++.+. .+..|++++|.++.
T Consensus 213 ~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 261 (264)
T 3ucx_A 213 VEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGE 261 (264)
T ss_dssp HHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 000111112233455789999999999999754 33458899988875
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.10 E-value=7.2e-10 Score=105.49 Aligned_cols=164 Identities=9% Similarity=0.016 Sum_probs=106.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC-------CCCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+
T Consensus 74 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 153 (272)
T 4dyv_A 74 DDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQE 153 (272)
T ss_dssp SCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC
Confidence 578999999999998887765 899999999975321 11234457889999777777654 333
Q ss_pred --CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEcc
Q 015570 78 --VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQ 148 (404)
Q Consensus 78 --VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~ 148 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+........ .....
T Consensus 154 ~~~g~IV~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~ 226 (272)
T 4dyv_A 154 PRGGRIINNGSISATSPR------PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG-VPQAD 226 (272)
T ss_dssp SCCEEEEEECCSSTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------
T ss_pred CCCcEEEEECchhhcCCC------CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc-chhhh
Confidence 3599999998765432 2346799999999988763 589999999999986533211111 11111
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
.......+++.+|||++++.++.++.......+.+...
T Consensus 227 ~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~~~ 264 (272)
T 4dyv_A 227 LSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTIMAT 264 (272)
T ss_dssp ---------CHHHHHHHHHHHHHSCTTSCCCEEEEEEC
T ss_pred hcccccCCCCHHHHHHHHHHHhCCCCcCccceEEEecc
Confidence 11223347899999999999999877554555555444
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=3.3e-10 Score=105.87 Aligned_cols=166 Identities=13% Similarity=0.143 Sum_probs=107.9
Q ss_pred EEcCCCCHhhHHHHhC----CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHH----hCCCCEEEEeccCcccCC
Q 015570 21 VECDLEKRVQIEPALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 21 V~gDl~d~~~l~~aL~----gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI~vSS~gv~~~ 92 (404)
+.+|+.|.+++.++++ ++|+|||+||.... ...+...+++|+.+..++++++. +.+..+||++||...+..
T Consensus 42 ~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 120 (257)
T 1fjh_A 42 LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHL 120 (257)
T ss_dssp TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSS
T ss_pred cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCC-cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhcc
Confidence 5678888888888875 45999999997641 12456678899999999888775 456789999999877521
Q ss_pred CC----ch------------------hhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Ccc
Q 015570 93 GF----PA------------------AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETH 142 (404)
Q Consensus 93 ~~----~~------------------~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~ 142 (404)
.. .. ........|+.+|..++.+.+. .|+.+++||||++.++..... ...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~ 200 (257)
T 1fjh_A 121 AFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP 200 (257)
T ss_dssp CGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------
T ss_pred ccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch
Confidence 00 00 0112456899999999988863 589999999999987543211 000
Q ss_pred cE-EEccC-CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 143 NI-TLSQE-DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 143 ~i-~~~~~-~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.. .+... ....+.+++.+|+|++++.++.+.. ...|+++.+.++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~ 248 (257)
T 1fjh_A 201 RYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248 (257)
T ss_dssp --------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred hHHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence 00 00000 1122357899999999999997653 2347788877763
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.3e-10 Score=108.48 Aligned_cols=166 Identities=10% Similarity=0.054 Sum_probs=115.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhCCC--CE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKV--NH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~agV--kr 80 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++...-. .+
T Consensus 68 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~ 147 (270)
T 3is3_A 68 SDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGR 147 (270)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCE
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCe
Confidence 578999999999988887664 789999999986432 123344578999999999998876533 39
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC------------c
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE------------T 141 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~------------~ 141 (404)
||++||........ .....|+.+|..++.+.+. .|+.+..|+||++..+...... .
T Consensus 148 iv~isS~~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 222 (270)
T 3is3_A 148 IVLTSSNTSKDFSV-----PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAE 222 (270)
T ss_dssp EEEECCTTTTTCCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHH
T ss_pred EEEEeCchhccCCC-----CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchH
Confidence 99999976432221 2346799999999988763 5899999999999875422000 0
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
............+.+.+.+|||++++.++.+.. +..|++++|.++
T Consensus 223 ~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 268 (270)
T 3is3_A 223 QRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268 (270)
T ss_dssp HHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence 000000111223446789999999999997543 345788888776
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.5e-10 Score=109.97 Aligned_cols=166 Identities=13% Similarity=0.073 Sum_probs=115.0
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHHHh---CCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATI---AKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa~~---agVk 79 (404)
+++++.+|+.|.+++.++++ ++|+|||++|.... . ..++...+++|+.+..++++++.. .+..
T Consensus 55 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g 134 (270)
T 1yde_A 55 GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQG 134 (270)
T ss_dssp TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCC
Confidence 58899999999998887764 79999999997532 1 112344568899999999888753 1246
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc----Ccc--cEEE
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----ETH--NITL 146 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----~~~--~i~~ 146 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+++||||+++++..... ... .+..
T Consensus 135 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 208 (270)
T 1yde_A 135 NVINISSLVGAIGQ------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIRE 208 (270)
T ss_dssp EEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHH
T ss_pred EEEEEcCccccCCC------CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHH
Confidence 99999997543221 1235799999999988763 589999999999987532100 000 0000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
.......+.+...+|||++++.++.+..+..|+++.|.++..
T Consensus 209 ~~~~~p~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~ 250 (270)
T 1yde_A 209 GMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAE 250 (270)
T ss_dssp HHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred HhhcCCCCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCee
Confidence 001122334679999999999999765445688999888864
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.6e-10 Score=110.13 Aligned_cols=165 Identities=14% Similarity=0.111 Sum_probs=114.9
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC----------CCCCcchhhHHHHHHHHHHHHHh----
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV----------FDITGPYRIDFQATKNLVDAATI---- 75 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~----------~d~~~~~~vnv~~~~~Ll~Aa~~---- 75 (404)
++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++..
T Consensus 59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 138 (280)
T 1xkq_A 59 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVA 138 (280)
T ss_dssp GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhc
Confidence 68999999999988877664 7999999999753211 12334467899899888887754
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC--c-----
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--T----- 141 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--~----- 141 (404)
.+ .+||++||........ .....|+.+|..++.+.+. .|+.+++||||+++++...... .
T Consensus 139 ~~-g~iv~isS~~~~~~~~-----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~ 212 (280)
T 1xkq_A 139 SK-GEIVNVSSIVAGPQAQ-----PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQK 212 (280)
T ss_dssp HT-CEEEEECCGGGSSSCC-----CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred CC-CcEEEecCccccCCCC-----CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccc
Confidence 34 7999999987654320 2246799999999887763 5899999999999876321110 0
Q ss_pred --ccEEEccCCccccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEEcCC
Q 015570 142 --HNITLSQEDTLFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAET 187 (404)
Q Consensus 142 --~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~~~~ 187 (404)
..+.........+.+.+.+|||++++.++... .+..++++++.++.
T Consensus 213 ~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~ 262 (280)
T 1xkq_A 213 FYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGT 262 (280)
T ss_dssp HHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred hHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCc
Confidence 00000011122345789999999999998653 23458899888875
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.09 E-value=3e-10 Score=106.91 Aligned_cols=168 Identities=15% Similarity=0.069 Sum_probs=119.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++.++.+|++|.+++..++ .++|++||+||..... ..++...+++|+.+..++++++... +..+
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~ 133 (255)
T 4eso_A 54 PRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGS 133 (255)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEE
T ss_pred CcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCE
Confidence 46889999999998877655 3789999999986432 1223445789999999999998763 2248
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc------EEEc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN------ITLS 147 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~------i~~~ 147 (404)
||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+......... ....
T Consensus 134 iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 207 (255)
T 4eso_A 134 IVFTSSVADEGGH------PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLG 207 (255)
T ss_dssp EEEECCGGGSSBC------TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHH
T ss_pred EEEECChhhcCCC------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHH
Confidence 9999998765432 2346899999999988763 4899999999999876432110000 0000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA 189 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~ 189 (404)
......+.+.+.+|||++++.++.+..+..|++++|.++...
T Consensus 208 ~~~~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~ 249 (255)
T 4eso_A 208 DNITPMKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQ 249 (255)
T ss_dssp HHHSTTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTT
T ss_pred hccCCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccc
Confidence 111223446799999999999998744456889999888653
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.3e-10 Score=106.81 Aligned_cols=167 Identities=12% Similarity=0.029 Sum_probs=112.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCC-CCCC------CCCCcchhhHHHHHHHHHHHHHhCCC--C
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGAS-EKEV------FDITGPYRIDFQATKNLVDAATIAKV--N 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~-~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~agV--k 79 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.. .... .++...+++|+.+..++++++...-. .
T Consensus 58 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g 137 (259)
T 3edm_A 58 RSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGG 137 (259)
T ss_dssp SCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 568999999999998887765 799999999865 2111 12234578999999999999977533 3
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccC-cccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~-~~~i~~~~~~~~ 152 (404)
+||++||....... ......|+.+|..++.+.+. .++.+..|+||++..+...... ............
T Consensus 138 ~iv~isS~~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p 212 (259)
T 3edm_A 138 AIVTFSSQAGRDGG-----GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATS 212 (259)
T ss_dssp EEEEECCHHHHHCC-----STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--------------------
T ss_pred EEEEEcCHHhccCC-----CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCC
Confidence 89999998664111 12246799999999988863 3488999999999765332111 011111112223
Q ss_pred ccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.+.+.+.+|||++++.++.+. .+..|++|+|.++.
T Consensus 213 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~ 248 (259)
T 3edm_A 213 LKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGV 248 (259)
T ss_dssp --CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCS
T ss_pred CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 345679999999999999765 33458899988886
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.09 E-value=2e-10 Score=109.00 Aligned_cols=165 Identities=15% Similarity=0.086 Sum_probs=115.3
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
....+.+|+.|.+++..++ .++|+|||+||..... ..++...+++|+.+..++++++ ++.+..
T Consensus 67 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g 146 (266)
T 3uxy_A 67 ADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGG 146 (266)
T ss_dssp CSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred hhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 3355689999988776654 4899999999986432 1223345678999999998887 555677
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-ccc------EE
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THN------IT 145 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~------i~ 145 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+++|+||+++++...... ... +.
T Consensus 147 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 220 (266)
T 3uxy_A 147 AIVNVASCWGLRPG------PGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVA 220 (266)
T ss_dssp EEEEECCSBTTBCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHH
T ss_pred EEEEECCHHhCCCC------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHH
Confidence 99999998765432 2346899999999988763 5899999999999875321000 000 01
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
........+.+.+.+|||++++.++.+.. +..|++++|.++.
T Consensus 221 ~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3uxy_A 221 ELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGK 263 (266)
T ss_dssp HHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCE
Confidence 11122333457899999999999997653 3458899988875
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=7.2e-10 Score=104.16 Aligned_cols=149 Identities=11% Similarity=0.044 Sum_probs=107.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---------CCCEEEEcCcCCC-CC------CCCCCcchhhHHHHHHHHHHHHHhC---
Q 015570 16 EMLELVECDLEKRVQIEPALG---------NASVVICCIGASE-KE------VFDITGPYRIDFQATKNLVDAATIA--- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---------gvDvVI~~ag~~~-~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a--- 76 (404)
.+++++.+|+.|.+++..+++ ++|+|||+||... .. ..++...+++|+.+..+|++++...
T Consensus 72 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 151 (267)
T 1sny_A 72 SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 151 (267)
T ss_dssp TTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhh
Confidence 478999999999999888776 7999999999764 11 1122335678999999988887543
Q ss_pred -------C-----CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC
Q 015570 77 -------K-----VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA 137 (404)
Q Consensus 77 -------g-----VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~ 137 (404)
+ ..+||++||........ .......|+.+|..+|.+++. .|+.+++||||++..+...
T Consensus 152 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 228 (267)
T 1sny_A 152 AAKANESQPMGVGRAAIINMSSILGSIQGN---TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG 228 (267)
T ss_dssp HHHHTTTSCSSTTTCEEEEECCGGGCSTTC---CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred cccccccccccCCCceEEEEecccccccCC---CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC
Confidence 2 46999999987654321 012346799999999988763 5899999999999754321
Q ss_pred ccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCCCC-CCcEEE
Q 015570 138 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVE 182 (404)
Q Consensus 138 ~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~n 182 (404)
. ...++.+|+|+.++.++.+.... .++.++
T Consensus 229 ~---------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~ 259 (267)
T 1sny_A 229 S---------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVN 259 (267)
T ss_dssp T---------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEEC
T ss_pred C---------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEc
Confidence 0 13578999999999999865433 344444
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.4e-10 Score=106.30 Aligned_cols=172 Identities=13% Similarity=0.089 Sum_probs=118.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC----CCCCCcchhhHHHHHHHHHHHHHhC--CCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE----VFDITGPYRIDFQATKNLVDAATIA--KVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~----~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI 82 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++... +..+||
T Consensus 71 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 150 (287)
T 3pxx_A 71 RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASII 150 (287)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEE
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEE
Confidence 578999999999998887665 899999999986432 1233455789999999999998764 335899
Q ss_pred EeccCcccCCC-----CchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc---------
Q 015570 83 MVSSLGTNKFG-----FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--------- 141 (404)
Q Consensus 83 ~vSS~gv~~~~-----~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--------- 141 (404)
++||....... ...........|+.+|..++.+.+. .|+.+..|+||++..+.......
T Consensus 151 ~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 230 (287)
T 3pxx_A 151 TTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLE 230 (287)
T ss_dssp EECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSS
T ss_pred EeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccc
Confidence 99997653211 0011113356799999999988763 48999999999998764321000
Q ss_pred cc------EEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 142 HN------ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 142 ~~------i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.. ..........+.+++.+|||++++.++.+. .+..|++++|.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~ 283 (287)
T 3pxx_A 231 APSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA 283 (287)
T ss_dssp SCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence 00 000011122245789999999999999654 33458899888874
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-10 Score=108.98 Aligned_cols=166 Identities=10% Similarity=0.024 Sum_probs=115.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHH----HHhCC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~A----a~~ag- 77 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..+++++ +++.+
T Consensus 52 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 131 (247)
T 3rwb_A 52 KKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK 131 (247)
T ss_dssp TTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 468899999999998887765 8999999999764321 12344568899998888887 55545
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i~~~~~ 149 (404)
..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+....... ....+...
T Consensus 132 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 205 (247)
T 3rwb_A 132 AGRVISIASNTFFAGT------PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEM 205 (247)
T ss_dssp CEEEEEECCTHHHHTC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHH
T ss_pred CcEEEEECchhhccCC------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhc
Confidence 5699999998654321 2246899999999887763 58999999999997642211000 00000000
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
....+.+.+.+|||++++.++.+.. +..|+++++.++.
T Consensus 206 ~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 206 LQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp HSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred ccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 0123446789999999999997653 3457888887764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.07 E-value=9.6e-11 Score=110.32 Aligned_cols=167 Identities=15% Similarity=0.124 Sum_probs=114.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-----------CCCCCCcchhhHHHHHHHHHHHHHhC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-----------~~~d~~~~~~vnv~~~~~Ll~Aa~~a- 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... ...++...+++|+.+..++++++...
T Consensus 64 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 143 (271)
T 3ek2_A 64 GSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPML 143 (271)
T ss_dssp TCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 358899999999998887764 78999999997642 11122345678999999999988764
Q ss_pred -CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccEEE
Q 015570 77 -KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITL 146 (404)
Q Consensus 77 -gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i~~ 146 (404)
+..+||++||....... ..+..|+.+|..++.+.+. .|+.++.|+||++..+....... .....
T Consensus 144 ~~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~ 217 (271)
T 3ek2_A 144 SDDASLLTLSYLGAERAI------PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDF 217 (271)
T ss_dssp EEEEEEEEEECGGGTSBC------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHH
T ss_pred ccCceEEEEeccccccCC------CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHH
Confidence 22489999998764332 2346799999999887763 58999999999998653221100 00000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
.......+.+.+.+|||++++.++.+. .+..|+++++.++..
T Consensus 218 ~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~ 260 (271)
T 3ek2_A 218 VESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFN 260 (271)
T ss_dssp HHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGG
T ss_pred HHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCee
Confidence 111122345689999999999999764 334588999988865
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=2.3e-10 Score=109.04 Aligned_cols=166 Identities=12% Similarity=0.111 Sum_probs=116.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC-----------CCCCCCcchhhHHHHHHHHHHHHHhC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~-----------~~~d~~~~~~vnv~~~~~Ll~Aa~~a- 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... ...++...+++|+.+..++++++...
T Consensus 75 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 154 (280)
T 3nrc_A 75 NPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMM 154 (280)
T ss_dssp CCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 458999999999988887664 67999999997642 11223345688999999999887653
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccEE
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNIT 145 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i~ 145 (404)
+..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+....... ....
T Consensus 155 ~~~~g~iv~isS~~~~~~~------~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~ 228 (280)
T 3nrc_A 155 KNRNASMVALTYIGAEKAM------PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLD 228 (280)
T ss_dssp TTTTCEEEEEECGGGTSCC------TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHH
T ss_pred hcCCCeEEEEeccccccCC------CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHH
Confidence 34699999998765432 2346899999999888762 68999999999998753321110 0000
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
........+.+.+.+|||++++.++.+. .+..|+++++.++.
T Consensus 229 ~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~ 271 (280)
T 3nrc_A 229 YNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGY 271 (280)
T ss_dssp HHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTG
T ss_pred HHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCc
Confidence 0111112344689999999999999754 33458899988875
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-09 Score=102.91 Aligned_cols=146 Identities=17% Similarity=0.122 Sum_probs=101.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCC-CC------CCCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASE-KE------VFDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~-~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
.+++++.+|++|.+++.++++ .+|+|||+||... .. ..++...+++|+.+..++++++. +.+
T Consensus 78 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 157 (262)
T 3rkr_A 78 GEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK 157 (262)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 468999999999998887664 6899999999732 11 12233456789989888887753 466
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
..+||++||....... .....|+.+|..++.+++. .|+.+++|+||++..+..... ...
T Consensus 158 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~ 223 (262)
T 3rkr_A 158 RGHIINISSLAGKNPV------ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL--------SAK 223 (262)
T ss_dssp CCEEEEECSSCSSCCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------
T ss_pred CceEEEEechhhcCCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc--------ccc
Confidence 7799999998765432 2346899999999887752 589999999999975432110 011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
.....+++.+|||++++.++.....
T Consensus 224 ~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 224 KSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp -----CCCHHHHHHHHHHHHTCCTT
T ss_pred cccccCCCHHHHHHHHHHHhcCccc
Confidence 1223468999999999999987653
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=4.7e-09 Score=96.86 Aligned_cols=156 Identities=13% Similarity=0.063 Sum_probs=109.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC---CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA---KVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a---gVk 79 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++... +..
T Consensus 52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 131 (235)
T 3l77_A 52 VEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGG 131 (235)
T ss_dssp CCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 578999999999999888776 7899999999864321 223345688999999988887542 234
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCccCcccEEEccCCcccc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 154 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~ 154 (404)
++|++||....... .....|+.+|..++.+.+. .|+.++.|+||++..+...... ......
T Consensus 132 ~ii~~sS~~~~~~~------~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~--------~~~~~~ 197 (235)
T 3l77_A 132 LALVTTSDVSARLI------PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP--------GKPKEK 197 (235)
T ss_dssp EEEEECCGGGSSCC------TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS--------CCCGGG
T ss_pred cEEEEecchhcccC------CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC--------Cccccc
Confidence 67777776543321 1236799999999988764 5899999999999764322110 011122
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEc
Q 015570 155 GQVSNLQVAELLACMAKNRSLSYCKVVEVIA 185 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~ 185 (404)
.+++.+|||++++.++.++.......+.+..
T Consensus 198 ~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~ 228 (235)
T 3l77_A 198 GYLKPDEIAEAVRCLLKLPKDVRVEELMLRS 228 (235)
T ss_dssp TCBCHHHHHHHHHHHHTSCTTCCCCEEEECC
T ss_pred CCCCHHHHHHHHHHHHcCCCCCccceEEEee
Confidence 5689999999999999887644444444443
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=5.9e-10 Score=104.22 Aligned_cols=153 Identities=12% Similarity=0.066 Sum_probs=104.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++..+++ ++|+|||+||...... .++...+++|+.+..++++++. +.+
T Consensus 56 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~- 134 (247)
T 2jah_A 56 AKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK- 134 (247)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-
Confidence 468999999999988887664 8999999999753221 1223446789999988888764 345
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||++..+.................
T Consensus 135 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~ 208 (247)
T 2jah_A 135 GTVVQMSSIAGRVNV------RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQR 208 (247)
T ss_dssp CEEEEECCGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHH
T ss_pred CEEEEEccHHhcCCC------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhc
Confidence 799999998764322 2246799999988877652 589999999999976532111000000000000
Q ss_pred c-ccCcccHHHHHHHHHHHHhCCCC
Q 015570 152 L-FGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 152 ~-~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
. ...+++.+|||++++.++.+...
T Consensus 209 ~~~~~~~~pedvA~~v~~l~s~~~~ 233 (247)
T 2jah_A 209 ISQIRKLQAQDIAEAVRYAVTAPHH 233 (247)
T ss_dssp TTTSCCBCHHHHHHHHHHHHHSCTT
T ss_pred ccccCCCCHHHHHHHHHHHhCCCcc
Confidence 0 01148999999999999987653
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.9e-10 Score=104.72 Aligned_cols=153 Identities=8% Similarity=-0.045 Sum_probs=97.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+..
T Consensus 56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g 135 (252)
T 3h7a_A 56 GRIVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQG 135 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CeEEEEECcCCCHHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 468999999999999888775 7899999999764321 123345678888888877766 445567
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCE-EEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPY-TIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~-tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+ .+|+||++..+.................
T Consensus 136 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~ 209 (252)
T 3h7a_A 136 KIFFTGATASLRGG------SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALAN 209 (252)
T ss_dssp EEEEEEEGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------
T ss_pred EEEEECCHHHcCCC------CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcC
Confidence 99999998764332 2346799999999887763 57888 8999999976433211111111111111
Q ss_pred cccCcccHHHHHHHHHHHHhCCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
.. ++++.+|||++++.++.++..
T Consensus 210 ~~-~~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 210 PD-LLMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp -----CCHHHHHHHHHHHHHCCGG
T ss_pred Cc-cCCCHHHHHHHHHHHHhCchh
Confidence 22 378999999999999987653
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4.4e-10 Score=105.88 Aligned_cols=166 Identities=11% Similarity=0.057 Sum_probs=115.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC----C------CCCCCcchhhHHHHHHHHHHHHHhCC--
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK----E------VFDITGPYRIDFQATKNLVDAATIAK-- 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~----~------~~d~~~~~~vnv~~~~~Ll~Aa~~ag-- 77 (404)
++.++.+|++|.+++.++++ ++|+|||++|.... . ..++...+++|+.+..++++++...-
T Consensus 60 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 139 (266)
T 3oig_A 60 DSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE 139 (266)
T ss_dssp CCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred CceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Confidence 79999999999988877664 78999999997641 1 11223346789999999999887642
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccEEEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i~~~~ 148 (404)
-.+||++||....... .....|+.+|..++.+.+. .|+.++.|+||++..+....... .......
T Consensus 140 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 213 (266)
T 3oig_A 140 GGSIVTLTYLGGELVM------PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIE 213 (266)
T ss_dssp CEEEEEEECGGGTSCC------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHH
T ss_pred CceEEEEecccccccC------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHH
Confidence 2489999998765432 2346799999999888763 58999999999997643221100 0000001
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
.....+.+.+.+|||++++.++.+. .+..++++++.++..
T Consensus 214 ~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 214 ERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH 254 (266)
T ss_dssp HHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence 1112234689999999999999764 334588898888753
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=2e-10 Score=107.51 Aligned_cols=162 Identities=12% Similarity=0.011 Sum_probs=112.6
Q ss_pred CCeEEEEcCCCCH-hhHHHHhC-------CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC----C---CCE
Q 015570 16 EMLELVECDLEKR-VQIEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA----K---VNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~-~~l~~aL~-------gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a----g---Vkr 80 (404)
.+++++.+|+.|. +++.++++ ++|+|||+||... ..++...+++|+.+..++++++... + ..+
T Consensus 55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~ 132 (254)
T 1sby_A 55 VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGI 132 (254)
T ss_dssp SEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred ceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCE
Confidence 3688999999998 77776654 8999999999753 2355667889999999999988642 1 358
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cEEEc-cCCc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITLS-QEDT 151 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i~~~-~~~~ 151 (404)
||++||...+... .....|+.+|..+|.+.+. .|+.+++||||++.++........ ..... ....
T Consensus 133 iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 206 (254)
T 1sby_A 133 IANICSVTGFNAI------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL 206 (254)
T ss_dssp EEEECCGGGTSCC------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH
T ss_pred EEEECchhhccCC------CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH
Confidence 9999998765432 2246799999999987763 589999999999986532110000 00000 0000
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
......+.+|+|++++.++... ..+++|++.++.
T Consensus 207 ~~~~~~~~~dvA~~i~~~~~~~--~~G~~~~v~gG~ 240 (254)
T 1sby_A 207 LSHPTQTSEQCGQNFVKAIEAN--KNGAIWKLDLGT 240 (254)
T ss_dssp TTSCCEEHHHHHHHHHHHHHHC--CTTCEEEEETTE
T ss_pred hcCCCCCHHHHHHHHHHHHHcC--CCCCEEEEeCCc
Confidence 0113458999999999998743 347899888873
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.05 E-value=6.3e-10 Score=104.80 Aligned_cols=168 Identities=10% Similarity=0.045 Sum_probs=116.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+.
T Consensus 73 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 152 (267)
T 3gdg_A 73 IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGT 152 (267)
T ss_dssp CCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCC
Confidence 578999999999988877664 6799999999764321 123345688999998888877 45566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
.+||++||........ ......|+.+|..++.+.+. ..+.+..|+||++..+..................
T Consensus 153 g~iv~isS~~~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 228 (267)
T 3gdg_A 153 GSLVITASMSGHIANF----PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIP 228 (267)
T ss_dssp CEEEEECCGGGTSCCS----SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTST
T ss_pred ceEEEEccccccccCC----CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCC
Confidence 7999999976643321 12346899999999988863 2378899999998754332111111111122233
Q ss_pred ccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.+.+.+.+|||++++.++.+. .+..|++++|.++.
T Consensus 229 ~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~ 264 (267)
T 3gdg_A 229 MGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGY 264 (267)
T ss_dssp TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred CCCCcCHHHHHhHhheeecCccccccCCEEEECCce
Confidence 345678999999999999764 33457888887774
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=2.2e-10 Score=109.10 Aligned_cols=166 Identities=10% Similarity=0.026 Sum_probs=115.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+.
T Consensus 77 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 156 (277)
T 4fc7_A 77 RRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHG 156 (277)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 478999999999988877664 899999999965321 12234457889999999988774 3345
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc---CcccEEEcc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK---ETHNITLSQ 148 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~---~~~~i~~~~ 148 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++..... ....+....
T Consensus 157 g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 230 (277)
T 4fc7_A 157 GVIVNITATLGNRGQ------ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKV 230 (277)
T ss_dssp EEEEEECCSHHHHTC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHH
T ss_pred CEEEEECchhhCCCC------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHh
Confidence 699999998664322 2246799999999988763 589999999999986521100 000011111
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.....+.+.+.+|||++++.++.+. .+..|++++|.++.
T Consensus 231 ~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~ 270 (277)
T 4fc7_A 231 TASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGA 270 (277)
T ss_dssp HTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred ccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCc
Confidence 1223345789999999999999754 33458888887774
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4.3e-10 Score=108.13 Aligned_cols=166 Identities=11% Similarity=0.094 Sum_probs=114.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC----------CCCCCCcchhhHHHHHHHHHHHHHhC--
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~----------~~~d~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... ...++...+++|+.+..++++++...
T Consensus 81 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 160 (293)
T 3grk_A 81 GAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA 160 (293)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 368899999999988887764 79999999997631 11223445788999999999988763
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-cc-EEEc
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN-ITLS 147 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~-i~~~ 147 (404)
+..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+....... .. ....
T Consensus 161 ~~g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 234 (293)
T 3grk_A 161 DGGSILTLTYYGAEKVM------PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWN 234 (293)
T ss_dssp TCEEEEEEECGGGTSBC------TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHH
T ss_pred CCCEEEEEeehhhccCC------CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHH
Confidence 23489999998765422 2246799999999988763 58999999999998753221100 00 0000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
......+.+...+|||++++.++.+. .+..++++++.++.
T Consensus 235 ~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 275 (293)
T 3grk_A 235 EYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGY 275 (293)
T ss_dssp HHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCc
Confidence 11122344679999999999999764 33458889888875
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=4.2e-10 Score=106.65 Aligned_cols=143 Identities=15% Similarity=0.065 Sum_probs=103.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.+++++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+.
T Consensus 80 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 159 (272)
T 1yb1_A 80 AKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNH 159 (272)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 478999999999988877664 7999999999764221 122345678888866665554 55677
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH----------CCCCEEEEEcCccCCCCCCccCcccEEEcc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA----------SGLPYTIVRPGGMERPTDAYKETHNITLSQ 148 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~----------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~ 148 (404)
.+||++||..++... .....|+.+|..+|.+++. .|+.+++||||++.++... .
T Consensus 160 ~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~--~-------- 223 (272)
T 1yb1_A 160 GHIVTVASAAGHVSV------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK--N-------- 223 (272)
T ss_dssp EEEEEECCCC-CCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT--C--------
T ss_pred CEEEEEechhhcCCC------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc--c--------
Confidence 899999998765321 2346799999999887752 3799999999998765321 0
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.....+.+++.+|+|++++.++.++.
T Consensus 224 ~~~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 224 PSTSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp THHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred ccccccCCCCHHHHHHHHHHHHHcCC
Confidence 00112457899999999999998765
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.6e-10 Score=109.66 Aligned_cols=166 Identities=12% Similarity=0.074 Sum_probs=115.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
..++.+.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+.
T Consensus 53 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 132 (269)
T 3vtz_A 53 NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGH 132 (269)
T ss_dssp TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 467889999999988887764 8999999999764321 1223346789999988887754 3566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccC-----------c
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-----------T 141 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~-----------~ 141 (404)
.+||++||...+... .....|+.+|..++.+.+. .++.+..|+||+++.+...... .
T Consensus 133 g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 206 (269)
T 3vtz_A 133 GSIINIASVQSYAAT------KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVE 206 (269)
T ss_dssp EEEEEECCGGGTSBC------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHH
T ss_pred CEEEEECchhhccCC------CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhH
Confidence 799999998775432 2346899999999988863 3789999999999864321000 0
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+.........+.+.+.+|||++++.++.+. .+..|++++|.++.
T Consensus 207 ~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 253 (269)
T 3vtz_A 207 RKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGL 253 (269)
T ss_dssp HHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence 00000111122345679999999999999764 33458899988874
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.7e-10 Score=109.29 Aligned_cols=166 Identities=14% Similarity=0.020 Sum_probs=115.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .+
T Consensus 70 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 149 (266)
T 4egf_A 70 TDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE 149 (266)
T ss_dssp CCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 578999999999988877664 8999999999864321 12334567899998888887643 23
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~ 148 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..... .........
T Consensus 150 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 223 (266)
T 4egf_A 150 GGAIITVASAAALAPL------PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMI 223 (266)
T ss_dssp CEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHH
T ss_pred CeEEEEEcchhhccCC------CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHH
Confidence 3589999998765432 2346899999999887763 589999999999986422100 000001111
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.....+.+.+.+|||++++.++.+. .+..|++++|.++.
T Consensus 224 ~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 4egf_A 224 ARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGY 263 (266)
T ss_dssp TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCc
Confidence 2223345789999999999999764 33458889888774
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=5.7e-10 Score=107.38 Aligned_cols=167 Identities=11% Similarity=0.093 Sum_probs=117.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC----------CCCCCCcchhhHHHHHHHHHHHHHhCC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~----------~~~d~~~~~~vnv~~~~~Ll~Aa~~ag- 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... ...++...+++|+.+..++++++...-
T Consensus 80 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 159 (296)
T 3k31_A 80 GVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMT 159 (296)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346899999999988887764 78999999997632 112334457889999999999987642
Q ss_pred -CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-cc-EEEc
Q 015570 78 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN-ITLS 147 (404)
Q Consensus 78 -VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~-i~~~ 147 (404)
..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+....... .. ....
T Consensus 160 ~~g~IV~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~ 233 (296)
T 3k31_A 160 NGGSILTLSYYGAEKVV------PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWN 233 (296)
T ss_dssp TCEEEEEEECGGGTSCC------TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHH
T ss_pred cCCEEEEEEehhhccCC------CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHH
Confidence 2489999998765432 2346799999999988763 58999999999998754321100 00 0000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
......+.+...+|||++++.++.+. .+..|++++|.++..
T Consensus 234 ~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~ 275 (296)
T 3k31_A 234 KYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYH 275 (296)
T ss_dssp HHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCcc
Confidence 11122345679999999999999764 334588999888853
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=6.7e-10 Score=104.16 Aligned_cols=143 Identities=12% Similarity=-0.022 Sum_probs=104.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhCCC--CE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKV--NH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~agV--kr 80 (404)
.+++++.+|+.|.+++..+++ ++|+||||||...... .++...+++|+.++.+|++++..... .+
T Consensus 54 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~ 133 (276)
T 1wma_A 54 LSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGR 133 (276)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEE
T ss_pred CeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCE
Confidence 468999999999998887776 8999999999764321 12234578999999999999987532 49
Q ss_pred EEEeccCcccCC--C--------------Cchh-------------------hcccchHHHHHHHHHHHHHHH-------
Q 015570 81 FIMVSSLGTNKF--G--------------FPAA-------------------ILNLFWGVLLWKRKAEEALIA------- 118 (404)
Q Consensus 81 fI~vSS~gv~~~--~--------------~~~~-------------------~~~~~~~y~~sK~~~E~~l~~------- 118 (404)
||++||..++.. . .+.. ...+...|+.+|..+|.+++.
T Consensus 134 iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~ 213 (276)
T 1wma_A 134 VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE 213 (276)
T ss_dssp EEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 999999765311 0 0000 001236899999999887752
Q ss_pred ----CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCC
Q 015570 119 ----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 119 ----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~ 173 (404)
.|+.+++|+||++..+.... ..+++.+|+|++++.++..+
T Consensus 214 ~~~~~~i~v~~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 214 QRKGDKILLNACCPGWVRTDMAGP---------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp HCTTSCCEEEEEECCSBCSTTTCT---------------TCSBCHHHHTHHHHHHHSCC
T ss_pred ccCCCceEEEEecCCccccCcCCc---------------cccCChhHhhhhHhhhhcCc
Confidence 48999999999997653211 23689999999999999755
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=3.6e-10 Score=107.29 Aligned_cols=165 Identities=14% Similarity=0.062 Sum_probs=113.7
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCC----C------CCCCCcchhhHHHHHHHHHHHHHhC--C
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEK----E------VFDITGPYRIDFQATKNLVDAATIA--K 77 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~----~------~~d~~~~~~vnv~~~~~Ll~Aa~~a--g 77 (404)
++.++.+|+.|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++++++... +
T Consensus 57 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 136 (275)
T 2pd4_A 57 SPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN 136 (275)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 47899999999988887664 78999999997542 0 1123345688999999999998765 1
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~~ 148 (404)
-.+||++||.+..... .....|+.+|..++.+.+. .|+.++.|+||++..+....... ..+ ....
T Consensus 137 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 210 (275)
T 2pd4_A 137 GASVLTLSYLGSTKYM------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNE 210 (275)
T ss_dssp EEEEEEEECGGGTSBC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHH
T ss_pred CCEEEEEecchhcCCC------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHH
Confidence 1589999997654321 2346799999999888763 58999999999998764321100 000 0000
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.....+.+.+.+|+|++++.++.+. .+..++++++.++.
T Consensus 211 ~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 211 INAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 250 (275)
T ss_dssp HHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 0112234679999999999999753 33357788877774
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=107.16 Aligned_cols=164 Identities=12% Similarity=-0.019 Sum_probs=113.8
Q ss_pred CCeEEEEcCCCCHh-----------------hHHHHhC-------CCCEEEEcCcCCCCCCC------------------
Q 015570 16 EMLELVECDLEKRV-----------------QIEPALG-------NASVVICCIGASEKEVF------------------ 53 (404)
Q Consensus 16 ~gveiV~gDl~d~~-----------------~l~~aL~-------gvDvVI~~ag~~~~~~~------------------ 53 (404)
.++.++.+|+.|.+ ++..+++ ++|+|||+||.......
T Consensus 97 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~ 176 (328)
T 2qhx_A 97 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 176 (328)
T ss_dssp TCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHH
T ss_pred CeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence 46899999999988 7776654 89999999997532211
Q ss_pred --CCCcchhhHHHHHHHHHHHHH----hCC------CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---
Q 015570 54 --DITGPYRIDFQATKNLVDAAT----IAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA--- 118 (404)
Q Consensus 54 --d~~~~~~vnv~~~~~Ll~Aa~----~ag------VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~--- 118 (404)
++...+++|+.+..+|++++. +.+ ..+||++||....... .....|+.+|..++.+.+.
T Consensus 177 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~ 250 (328)
T 2qhx_A 177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------LGYTIYTMAKGALEGLTRSAAL 250 (328)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC------CCcHHHHHHHHHHHHHHHHHHH
Confidence 122346788888888877765 445 5799999998765432 2346899999999988763
Q ss_pred ----CCCCEEEEEcCccCCCCCCccCcccEEEccCCcccc-CcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 119 ----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG-GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 119 ----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~-~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.|+.+++|+||++..+. ... ...+.......... .+.+.+|||++++.++... .+..|+++++.++.
T Consensus 251 el~~~gIrvn~v~PG~v~T~~-~~~-~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 323 (328)
T 2qhx_A 251 ELAPLQIRVNGVGPGLSVLVD-DMP-PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323 (328)
T ss_dssp HHGGGTEEEEEEEESSBSCCC-CSC-HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhhcCcEEEEEecCcccCCc-ccc-HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 48999999999998764 211 00000001111223 5679999999999999653 33457888887763
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=105.53 Aligned_cols=166 Identities=11% Similarity=0.073 Sum_probs=115.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-------CCCCcchhhHHHHHHHHHHHHHh----C-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAATI----A- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-------~d~~~~~~vnv~~~~~Ll~Aa~~----a- 76 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .
T Consensus 89 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 168 (299)
T 3t7c_A 89 RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK 168 (299)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 578999999999988887664 8999999999764321 12344578899999998887643 2
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cE----
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NI---- 144 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i---- 144 (404)
+..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+........ .+
T Consensus 169 ~~g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 242 (299)
T 3t7c_A 169 RGGSIVFTSSIGGLRGA------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDL 242 (299)
T ss_dssp SCEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTS
T ss_pred CCcEEEEECChhhccCC------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhh
Confidence 35699999998765432 2346899999999888763 489999999999987643210000 00
Q ss_pred ---EE-------ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 145 ---TL-------SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 145 ---~~-------~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.. .......+.+...+|||++++.++.+.. +.-|++++|.++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 296 (299)
T 3t7c_A 243 ENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA 296 (299)
T ss_dssp SSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ccchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence 00 0001111356799999999999997643 3458889888774
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.9e-10 Score=108.24 Aligned_cols=166 Identities=11% Similarity=0.084 Sum_probs=113.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCC-CC------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASE-KE------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~-~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||... .. ..++...+++|+.+..++++++ ++.+
T Consensus 87 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 166 (287)
T 3rku_A 87 AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN 166 (287)
T ss_dssp CEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 468899999999999888765 6899999999753 11 1223445788999999988887 4556
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.++.|+||++..+................
T Consensus 167 ~g~IV~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~ 240 (287)
T 3rku_A 167 SGDIVNLGSIAGRDAY------PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNV 240 (287)
T ss_dssp CCEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHH
T ss_pred CCeEEEECChhhcCCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHh
Confidence 6799999998764332 2246799999999988763 58999999999997642110000000000000
Q ss_pred ccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~ 187 (404)
......+..+|||++++.++.+... ..++++.+.+++
T Consensus 241 ~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~ 278 (287)
T 3rku_A 241 YKDTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQ 278 (287)
T ss_dssp HTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTE
T ss_pred hcccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCC
Confidence 0011245899999999999987652 246777777665
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.7e-09 Score=103.22 Aligned_cols=166 Identities=15% Similarity=0.075 Sum_probs=116.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-------CCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-------~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .+
T Consensus 76 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 155 (286)
T 3uve_A 76 RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG 155 (286)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 578999999999998887764 8999999999754321 22344578899999998887653 23
Q ss_pred -CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cE----
Q 015570 78 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NI---- 144 (404)
Q Consensus 78 -VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i---- 144 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+........ .+
T Consensus 156 ~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 229 (286)
T 3uve_A 156 RGGSIILTSSVGGLKAY------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDL 229 (286)
T ss_dssp SCEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTS
T ss_pred CCcEEEEECchhhccCC------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccc
Confidence 3589999998765432 2346799999999888763 589999999999987643210000 00
Q ss_pred ---------E-EccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 145 ---------T-LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 145 ---------~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
. ........+.+.+.+|||++++.++.+. .+.-|++++|.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~ 283 (286)
T 3uve_A 230 ENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS 283 (286)
T ss_dssp SSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence 0 0011111245789999999999999754 33458899888774
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.8e-10 Score=112.22 Aligned_cols=182 Identities=10% Similarity=-0.043 Sum_probs=123.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhCC-----
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAK----- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~ag----- 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++...-
T Consensus 86 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~ 165 (322)
T 3qlj_A 86 GEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSK 165 (322)
T ss_dssp CEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccc
Confidence 467899999999988887765 899999999986432 12234457889999999888775321
Q ss_pred -----CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEE
Q 015570 78 -----VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT 145 (404)
Q Consensus 78 -----VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~ 145 (404)
-.+||++||....... .....|+.+|..++.+.+. .|+.+..|+|| +..+...........
T Consensus 166 ~~~~~~g~IV~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~ 238 (322)
T 3qlj_A 166 AGKAVDGRIINTSSGAGLQGS------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA 238 (322)
T ss_dssp TTCCCCEEEEEECCHHHHHCB------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---
T ss_pred cCCCCCcEEEEEcCHHHccCC------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh
Confidence 1489999997654321 2246799999999988763 58999999999 544322111011110
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCC--------------CCccHHHHHHHcccccCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA--------------PLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~--------------~~~si~ell~~i~~~~g~ 207 (404)
.......++..+|||++++.++.... +..|++|++.++... ..+++.|+++.+.+.+|.
T Consensus 239 ---~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~ 312 (322)
T 3qlj_A 239 ---TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGK 312 (322)
T ss_dssp --------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHH
T ss_pred ---ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhc
Confidence 01111235689999999999996543 335889988887532 123678888888777764
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.02 E-value=1e-09 Score=104.89 Aligned_cols=164 Identities=12% Similarity=0.043 Sum_probs=111.8
Q ss_pred CCeEEEEcCCCC----HhhHHHHhC-------CCCEEEEcCcCCCCCCC----------------CCCcchhhHHHHHHH
Q 015570 16 EMLELVECDLEK----RVQIEPALG-------NASVVICCIGASEKEVF----------------DITGPYRIDFQATKN 68 (404)
Q Consensus 16 ~gveiV~gDl~d----~~~l~~aL~-------gvDvVI~~ag~~~~~~~----------------d~~~~~~vnv~~~~~ 68 (404)
.++.++.+|++| .+++.++++ ++|+|||+||....... ++...+++|+.+..+
T Consensus 74 ~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 153 (288)
T 2x9g_A 74 NTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFL 153 (288)
T ss_dssp TCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHH
T ss_pred CceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHH
Confidence 468999999999 887776654 89999999997532211 122346788888888
Q ss_pred HHHHHHhC----C------CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCcc
Q 015570 69 LVDAATIA----K------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGM 131 (404)
Q Consensus 69 Ll~Aa~~a----g------VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~ 131 (404)
+++++... + ..+||++||....... ..+..|+.+|..++.+.+. .|+.+++|+||++
T Consensus 154 l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v 227 (288)
T 2x9g_A 154 LTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVS 227 (288)
T ss_dssp HHHHHHHHC--------CCCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSC
T ss_pred HHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCC------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccc
Confidence 88877542 3 4589999998765432 2346799999988877763 4899999999999
Q ss_pred CCCCCCccCcccEEEccCCccccCc-ccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 132 ERPTDAYKETHNITLSQEDTLFGGQ-VSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 132 ~G~~~~~~~~~~i~~~~~~~~~~~~-Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
+++. ... .............+.+ .+.+|||++++.++... .+..++++.+.++.
T Consensus 228 ~t~~-~~~-~~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 283 (288)
T 2x9g_A 228 LLPV-AMG-EEEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283 (288)
T ss_dssp SCCT-TSC-HHHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCcc-ccC-hHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence 8875 211 0000000011122335 79999999999999754 33457788777663
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.01 E-value=6.4e-10 Score=105.99 Aligned_cols=167 Identities=12% Similarity=0.062 Sum_probs=116.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .+.
T Consensus 81 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 160 (276)
T 3r1i_A 81 GKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL 160 (276)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 478899999999999887765 8999999999864321 12233457899998888887653 332
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
.+||++||........ ......|+.+|..++.+.+. .|+.+..|+||++..+....... ........
T Consensus 161 ~g~iv~isS~~~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~ 235 (276)
T 3r1i_A 161 GGTIITTASMSGHIINI----PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-YHALWEPK 235 (276)
T ss_dssp CEEEEEECCGGGTSCCC----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-GHHHHGGG
T ss_pred CcEEEEECchHhcccCC----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-HHHHHHhc
Confidence 5899999986643221 12346799999999988763 58999999999998754321111 11111112
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...+.+...+|||++++.++.+.. +..|++++|.++.
T Consensus 236 ~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 236 IPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGY 273 (276)
T ss_dssp STTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence 223456789999999999997543 3457888887774
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.6e-10 Score=104.61 Aligned_cols=165 Identities=10% Similarity=0.005 Sum_probs=112.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++... +..+
T Consensus 77 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~ 156 (267)
T 3u5t_A 77 GKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGR 156 (267)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe
Confidence 478899999999988887764 8999999999864221 123344679999999999888653 2248
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cEEEccCCcc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTL 152 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i~~~~~~~~ 152 (404)
||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+........ ..........
T Consensus 157 iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p 230 (267)
T 3u5t_A 157 IINMSTSQVGLLH------PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP 230 (267)
T ss_dssp EEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSST
T ss_pred EEEEeChhhccCC------CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCC
Confidence 9999998664322 2246799999999988863 589999999999976532110000 0011112223
Q ss_pred ccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.+.+...+|||++++.++.... +..|+++++.++
T Consensus 231 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 231 LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 3457899999999999997654 335778887665
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.8e-10 Score=109.54 Aligned_cols=166 Identities=11% Similarity=0.026 Sum_probs=116.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
.+++++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.++.++++++.. .+.
T Consensus 75 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 154 (271)
T 4ibo_A 75 HDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGY 154 (271)
T ss_dssp CCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 478999999999998887765 799999999976322 123344578899999888776643 466
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i~~~~~ 149 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+....... ........
T Consensus 155 g~iV~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 228 (271)
T 4ibo_A 155 GKIVNIGSLTSELAR------ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKA 228 (271)
T ss_dssp EEEEEECCGGGTSBC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHH
T ss_pred cEEEEEccHHhCCCC------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHh
Confidence 799999998664322 2346799999999988763 58999999999998753221000 00000111
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+.+.+|||++++.++... .+..|++++|.++.
T Consensus 229 ~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 267 (271)
T 4ibo_A 229 RTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGM 267 (271)
T ss_dssp HSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCe
Confidence 122345678999999999998754 33458899888774
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.8e-09 Score=102.63 Aligned_cols=166 Identities=14% Similarity=0.116 Sum_probs=114.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag- 77 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+
T Consensus 73 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 152 (277)
T 3tsc_A 73 RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR 152 (277)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Confidence 578999999999988887664 6999999999864321 2233457889999888888753 333
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc----------C
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----------E 140 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----------~ 140 (404)
-.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..... .
T Consensus 153 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 226 (277)
T 3tsc_A 153 GGSIILISSAAGMKMQ------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMET 226 (277)
T ss_dssp CEEEEEECCGGGTSCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHT
T ss_pred CCEEEEEccHhhCCCC------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccc
Confidence 3589999998765432 2246799999999988863 589999999999987532210 0
Q ss_pred cccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 141 THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 141 ~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...............+.+.+|||++++.++.+.. +..|++++|.++.
T Consensus 227 ~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 227 NPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp CGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 0000000011111236799999999999997643 3457888887774
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.00 E-value=8.7e-10 Score=104.81 Aligned_cols=166 Identities=12% Similarity=0.084 Sum_probs=113.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcC-cCCCCCC--------C---CCCcchhhHHHHHHHHHHHHHh--
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCI-GASEKEV--------F---DITGPYRIDFQATKNLVDAATI-- 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~a-g~~~~~~--------~---d~~~~~~vnv~~~~~Ll~Aa~~-- 75 (404)
.++.++.+|+.|.+++.++++ ++|+|||++ +...... . ++...+++|+.+..++++++..
T Consensus 76 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 155 (281)
T 3ppi_A 76 NRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASI 155 (281)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 468999999999999887765 689999994 4332111 1 1244567899899888887752
Q ss_pred --------CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC
Q 015570 76 --------AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE 140 (404)
Q Consensus 76 --------agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~ 140 (404)
.+..+||++||....... .....|+.+|..++.+.+. .|+.++.|+||++..+......
T Consensus 156 ~~~~~~~~~~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 229 (281)
T 3ppi_A 156 AAAEPRENGERGALVLTASIAGYEGQ------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG 229 (281)
T ss_dssp HTSCCCTTSCCEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC
T ss_pred HhhcccccCCCeEEEEEecccccCCC------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc
Confidence 233589999998765432 2346899999998887753 5899999999999754221110
Q ss_pred cccEE-EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 141 THNIT-LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 141 ~~~i~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
..... +.......+.+++.+|||++++.++.+. +..|+++++.++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~-~~tG~~i~vdGG~~ 277 (281)
T 3ppi_A 230 EEALAKFAANIPFPKRLGTPDEFADAAAFLLTNG-YINGEVMRLDGAQR 277 (281)
T ss_dssp HHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHCS-SCCSCEEEESTTCC
T ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcCC-CcCCcEEEECCCcc
Confidence 00000 1111111145789999999999999864 45688999888764
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.6e-09 Score=105.38 Aligned_cols=166 Identities=13% Similarity=0.079 Sum_probs=115.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----ag- 77 (404)
.++.++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .+
T Consensus 107 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 186 (317)
T 3oec_A 107 RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ 186 (317)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 478999999999988887764 8999999999764321 22334568899999988887743 33
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC--------cc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--------TH 142 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--------~~ 142 (404)
-.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||+++++...... ..
T Consensus 187 ~g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 260 (317)
T 3oec_A 187 GGSVIFVSSTVGLRGA------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLE 260 (317)
T ss_dssp CEEEEEECCGGGSSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCS
T ss_pred CCEEEEECcHHhcCCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcc
Confidence 3589999998765432 2346899999999988763 5899999999999875321000 00
Q ss_pred c------EE-EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 143 N------IT-LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 143 ~------i~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
. .. +.........+++.+|||++++.++.+.. +..|++++|.++.
T Consensus 261 ~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~ 313 (317)
T 3oec_A 261 NPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313 (317)
T ss_dssp SCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred ccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence 0 00 00111122457899999999999986543 3458899888774
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.8e-09 Score=111.23 Aligned_cols=171 Identities=15% Similarity=0.133 Sum_probs=116.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCC------CEEEEcCcCCCCCC---C---CCCcchhhHHHHHHHHHHHHHhCCCCEEEE
Q 015570 16 EMLELVECDLEKRVQIEPALGNA------SVVICCIGASEKEV---F---DITGPYRIDFQATKNLVDAATIAKVNHFIM 83 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gv------DvVI~~ag~~~~~~---~---d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~ 83 (404)
.+++++.+|+.|.+++..+++++ |+|||++|...... . ++...+++|+.++.+|++++...+..+||+
T Consensus 279 ~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~ 358 (486)
T 2fr1_A 279 ARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVL 358 (486)
T ss_dssp CEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEE
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEE
Confidence 46889999999999999988765 99999999864321 1 122345779999999999999989999999
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHH
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL 160 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~ 160 (404)
+||....... .....|+.+|..++.+.+ ..|+++++|++|.+++.++.... ..-.+. ......++.+
T Consensus 359 ~SS~a~~~g~------~g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~-~~~~~~---~~g~~~i~~e 428 (486)
T 2fr1_A 359 FSSFASAFGA------PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP-VADRFR---RHGVIEMPPE 428 (486)
T ss_dssp EEEHHHHTCC------TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------CT---TTTEECBCHH
T ss_pred EcChHhcCCC------CCCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchh-HHHHHH---hcCCCCCCHH
Confidence 9997542211 112468889988886654 47999999999999865332110 000011 1112468999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 161 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 161 DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
|+++++..++..... . + ++.. ++|..+...+.....
T Consensus 429 ~~a~~l~~~l~~~~~---~-~-~v~~-----~d~~~~~~~~~~~~~ 464 (486)
T 2fr1_A 429 TACRALQNALDRAEV---C-P-IVID-----VRWDRFLLAYTAQRP 464 (486)
T ss_dssp HHHHHHHHHHHTTCS---S-C-EECE-----ECHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHhCCCC---e-E-EEEe-----CCHHHHhhhhcccCC
Confidence 999999999987652 1 1 2222 678888776665544
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.99 E-value=9.2e-10 Score=102.73 Aligned_cols=166 Identities=13% Similarity=0.075 Sum_probs=115.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a 76 (404)
.++.++.+|+.|.+++..+++ .+|+|||+||...... .++...+++|+.+..++++++...
T Consensus 57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 136 (255)
T 3icc_A 57 GSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSR 136 (255)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred CceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHh
Confidence 467899999999988776654 2999999999763321 112334678999999999998764
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCccc--EE
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--IT 145 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~--i~ 145 (404)
+..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+......... ..
T Consensus 137 ~~~~~~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~ 210 (255)
T 3icc_A 137 LRDNSRIINISSAATRISL------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQ 210 (255)
T ss_dssp EEEEEEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHH
T ss_pred hCCCCEEEEeCChhhccCC------CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHH
Confidence 33589999998765432 2346899999999887752 5899999999999765432111100 11
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
........+.+.+.+|||++++.++... .+..|+++++.++.
T Consensus 211 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~ 253 (255)
T 3icc_A 211 YATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS 253 (255)
T ss_dssp HHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred hhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence 1111222345679999999999998654 33458899988774
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.1e-09 Score=100.73 Aligned_cols=163 Identities=10% Similarity=0.011 Sum_probs=105.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+.
T Consensus 53 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 132 (264)
T 3tfo_A 53 GTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRS 132 (264)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 467899999999988877654 8999999999864321 2233456889888887777653 4466
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCccCcccEEEccCCccc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 153 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~ 153 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+........... .......
T Consensus 133 g~IV~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~ 205 (264)
T 3tfo_A 133 GQIINIGSIGALSVV------PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETM-AAMDTYR 205 (264)
T ss_dssp EEEEEECCGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------
T ss_pred eEEEEEcCHHHcccC------CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHH-HHHHhhh
Confidence 799999998765432 2346799999999887753 489999999999976432211000000 0000111
Q ss_pred cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEc
Q 015570 154 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 185 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~ 185 (404)
...+..+|||++++.++.++.......+.|..
T Consensus 206 ~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p 237 (264)
T 3tfo_A 206 AIALQPADIARAVRQVIEAPQSVDTTEITIRP 237 (264)
T ss_dssp --CCCHHHHHHHHHHHHHSCTTEEEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHhcCCccCccceEEEec
Confidence 12478999999999999987744434444443
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.98 E-value=3.2e-10 Score=106.88 Aligned_cols=164 Identities=9% Similarity=-0.003 Sum_probs=109.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCC-CCC------CCCCCcchhhHHHHHHHHHHHHHh----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGAS-EKE------VFDITGPYRIDFQATKNLVDAATI----AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~-~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----ag 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.. ... ..++...+++|+.+..++++++.. .+
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 135 (262)
T 1zem_A 56 VEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN 135 (262)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 468899999999988776654 899999999975 211 112344567898888888877654 35
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----------- 139 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~----------- 139 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+.....
T Consensus 136 ~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 209 (262)
T 1zem_A 136 YGRIVNTASMAGVKGP------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQ 209 (262)
T ss_dssp CEEEEEECCHHHHSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCT
T ss_pred CcEEEEEcchhhccCC------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhcccc
Confidence 6799999998654322 2246799999988877653 589999999999865421100
Q ss_pred --C-ccc-E-EEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEc
Q 015570 140 --E-THN-I-TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIA 185 (404)
Q Consensus 140 --~-~~~-i-~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~ 185 (404)
. ... . .........+.+...+|||++++.++.+. .+..|+++.+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 261 (262)
T 1zem_A 210 YFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG 261 (262)
T ss_dssp TSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred ccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence 0 000 0 00001112234678999999999999754 333467777654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.97 E-value=5.8e-09 Score=99.62 Aligned_cols=151 Identities=11% Similarity=0.041 Sum_probs=103.0
Q ss_pred eEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC-------CCCCCcchhhHHHHHHHHHHHHH----hCC--
Q 015570 18 LELVECDLEKRVQIEPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAAT----IAK-- 77 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag-- 77 (404)
+.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+
T Consensus 85 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~ 164 (281)
T 4dry_A 85 VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR 164 (281)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 5899999999988877664 789999999975321 12233456788888777666554 433
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+....... ........
T Consensus 165 ~g~IV~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~ 237 (281)
T 4dry_A 165 GGRIINNGSISAQTPR------PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST-GVLQANGE 237 (281)
T ss_dssp CEEEEEECCGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C-EEECTTSC
T ss_pred CcEEEEECCHHhCCCC------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc-hhhhhhhc
Confidence 4599999998765432 2346899999999888763 58999999999997653321111 11111112
Q ss_pred ccccCcccHHHHHHHHHHHHhCCCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRSL 175 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~~ 175 (404)
.....++..+|||++++.++.++..
T Consensus 238 ~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 238 VAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp EEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred ccccCCCCHHHHHHHHHHHhCCCcc
Confidence 2234578999999999999998773
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.8e-09 Score=102.01 Aligned_cols=165 Identities=13% Similarity=0.081 Sum_probs=114.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agVk 79 (404)
++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++.. .+..
T Consensus 60 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g 139 (265)
T 3lf2_A 60 RLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADA 139 (265)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Confidence 58999999999988776653 7899999999763321 22334568899999998888743 4556
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--c-------c
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--H-------N 143 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~-------~ 143 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+....... . .
T Consensus 140 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 213 (265)
T 3lf2_A 140 AIVCVNSLLASQPE------PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQ 213 (265)
T ss_dssp EEEEEEEGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHH
T ss_pred EEEEECCcccCCCC------CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHH
Confidence 89999998765432 2346899999999988763 58999999999997642110000 0 0
Q ss_pred EE--Ec-cCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 144 IT--LS-QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 144 i~--~~-~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
+. +. ......+.+...+|||++++.++.+. .+..|++++|.++.
T Consensus 214 ~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 261 (265)
T 3lf2_A 214 WTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL 261 (265)
T ss_dssp HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred HHHHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence 00 00 00123345779999999999999754 33457888887774
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=103.23 Aligned_cols=167 Identities=11% Similarity=0.077 Sum_probs=114.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHH----HHhCCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~A----a~~agVkrfI 82 (404)
..+..+.+|+.|.+.+.++++ ++|++||+||...... .++...+++|+.+..+++++ +++.+..+||
T Consensus 61 ~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv 140 (267)
T 3t4x_A 61 AILQPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVI 140 (267)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred ceEEEEecCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 457889999999988887765 8999999999764321 12333468898886666554 4556667999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----Cccc-------
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----ETHN------- 143 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-----~~~~------- 143 (404)
++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..... ....
T Consensus 141 ~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~ 214 (267)
T 3t4x_A 141 FIASEAAIMPS------QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAE 214 (267)
T ss_dssp EECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHH
T ss_pred EEcchhhccCC------CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHH
Confidence 99998765432 2346899999999988863 478999999999876421100 0000
Q ss_pred ---EEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 144 ---ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 144 ---i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
+.........+.+.+.+|||++++.++.+. .+.-|++++|.++..
T Consensus 215 ~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 263 (267)
T 3t4x_A 215 KRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLV 263 (267)
T ss_dssp HHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred HHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcc
Confidence 000001112345789999999999999754 334588999888754
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.8e-09 Score=103.31 Aligned_cols=159 Identities=9% Similarity=-0.034 Sum_probs=110.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----CC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----KV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----gV 78 (404)
.++.++.+|++|.+++.++++ ++|++||+||...... .++...+++|+.+..++++++... +.
T Consensus 65 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 144 (285)
T 3sc4_A 65 GQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDN 144 (285)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSS
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 468899999999988887765 8999999999864321 122344679999999999987653 56
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... ......|+.+|..++.+.+. .|+.+..|+||++..... .. .......
T Consensus 145 g~iv~isS~~~~~~~-----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~-~~-----~~~~~~~ 213 (285)
T 3sc4_A 145 PHILTLSPPIRLEPK-----WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA-VQ-----NLLGGDE 213 (285)
T ss_dssp CEEEECCCCCCCSGG-----GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH-HH-----HHHTSCC
T ss_pred cEEEEECChhhccCC-----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH-HH-----hhccccc
Confidence 799999997654321 12236799999999988763 689999999996432100 00 0011112
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEc
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 185 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~ 185 (404)
....+...+|||++++.++.+..+..++++.+.+
T Consensus 214 ~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~dg 247 (285)
T 3sc4_A 214 AMARSRKPEVYADAAYVVLNKPSSYTGNTLLCED 247 (285)
T ss_dssp CCTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred cccCCCCHHHHHHHHHHHhCCcccccceEEEEcC
Confidence 2345678999999999999877644455554443
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=103.92 Aligned_cols=153 Identities=16% Similarity=-0.007 Sum_probs=104.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag- 77 (404)
.++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++. +.+
T Consensus 80 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 159 (301)
T 3tjr_A 80 FDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT 159 (301)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Confidence 478999999999998887765 899999999976322 12233457889999999888864 333
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-ccc--EE--
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THN--IT-- 145 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~--i~-- 145 (404)
..+||++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+...... ... +.
T Consensus 160 ~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 233 (301)
T 3tjr_A 160 GGHIAFTASFAGLVPN------AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMS 233 (301)
T ss_dssp CEEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-------
T ss_pred CcEEEEeCchhhcCCC------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccc
Confidence 4699999998765432 2346899999999887753 5899999999999764321100 000 00
Q ss_pred -----EccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 146 -----LSQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 146 -----~~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
..........+++.+|||++++.+++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 234 ATPEGAFGPLPTQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp ---------------CCCHHHHHHHHHHHHHHTC
T ss_pred cChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence 00011112247899999999999998765
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.9e-09 Score=102.09 Aligned_cols=164 Identities=12% Similarity=-0.030 Sum_probs=112.3
Q ss_pred CCeEEEEcCCCCHh-----------------hHHHHhC-------CCCEEEEcCcCCCCCC-------------------
Q 015570 16 EMLELVECDLEKRV-----------------QIEPALG-------NASVVICCIGASEKEV------------------- 52 (404)
Q Consensus 16 ~gveiV~gDl~d~~-----------------~l~~aL~-------gvDvVI~~ag~~~~~~------------------- 52 (404)
.++.++.+|+.|.+ ++.++++ ++|+|||+||......
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (291)
T 1e7w_A 60 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 139 (291)
T ss_dssp TCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHH
T ss_pred CeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence 46899999999988 7776654 8999999999753221
Q ss_pred -CCCCcchhhHHHHHHHHHHHHH----hCC------CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---
Q 015570 53 -FDITGPYRIDFQATKNLVDAAT----IAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA--- 118 (404)
Q Consensus 53 -~d~~~~~~vnv~~~~~Ll~Aa~----~ag------VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~--- 118 (404)
.++...+++|+.+..++++++. +.+ ..+||++||....... .....|+.+|..++.+.+.
T Consensus 140 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~ 213 (291)
T 1e7w_A 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------LGYTIYTMAKGALEGLTRSAAL 213 (291)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC------CCCchhHHHHHHHHHHHHHHHH
Confidence 1122346788888888877765 445 5799999998765432 2346899999999887763
Q ss_pred ----CCCCEEEEEcCccCCCCCCccCcccEEEccCCcccc-CcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 119 ----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG-GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 119 ----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~-~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.|+.++.|+||++..+. . ...............+ .+.+.+|||++++.++... .+..++++++.++.
T Consensus 214 e~~~~gI~vn~v~PG~v~T~~-~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 286 (291)
T 1e7w_A 214 ELAPLQIRVNGVGPGLSVLVD-D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286 (291)
T ss_dssp HHGGGTEEEEEEEESSBCCGG-G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhcCeEEEEEeeCCccCCc-c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence 58999999999996543 1 1000000001111223 4679999999999999754 33457788877763
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=101.44 Aligned_cols=157 Identities=11% Similarity=0.077 Sum_probs=113.6
Q ss_pred eEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-------CCCCcchhhHHHHHHHHHHHHHhCC--CCEE
Q 015570 18 LELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAATIAK--VNHF 81 (404)
Q Consensus 18 veiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-------~d~~~~~~vnv~~~~~Ll~Aa~~ag--Vkrf 81 (404)
...+.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++...- -.+|
T Consensus 61 ~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i 140 (251)
T 3orf_A 61 DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLF 140 (251)
T ss_dssp SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEE
Confidence 3568899999988887664 5799999999753221 1233456789999999999987642 2389
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
|++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+.... ......
T Consensus 141 v~isS~~~~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~--------~~~~~~ 206 (251)
T 3orf_A 141 VLTGASAALNRT------SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK--------YMSDAN 206 (251)
T ss_dssp EEECCGGGGSCC------TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHH--------HCTTSC
T ss_pred EEEechhhccCC------CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhh--------hccccc
Confidence 999998765432 2346899999999998863 47889999999997642110 011122
Q ss_pred ccCcccHHHHHHHHHHHHhC-C-CCCCCcEEEEEcCCC
Q 015570 153 FGGQVSNLQVAELLACMAKN-R-SLSYCKVVEVIAETT 188 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~-~-~~~~~~i~nI~~~~~ 188 (404)
...+++.+|||++++.++.+ . ....|+++++.+++.
T Consensus 207 ~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~ 244 (251)
T 3orf_A 207 FDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK 244 (251)
T ss_dssp GGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred ccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence 34578999999999999987 2 234588999987764
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.94 E-value=4.1e-10 Score=106.42 Aligned_cols=166 Identities=10% Similarity=0.101 Sum_probs=109.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++... +..+
T Consensus 63 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~ 142 (262)
T 3ksu_A 63 AKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGH 142 (262)
T ss_dssp CEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCE
Confidence 468899999999998887764 7999999999764321 123344679999999999999874 4458
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEEccCCcc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTL 152 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~~~~~ 152 (404)
+|++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..... .............
T Consensus 143 iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 216 (262)
T 3ksu_A 143 IITIATSLLAAYT------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAM 216 (262)
T ss_dssp EEEECCCHHHHHH------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------C
T ss_pred EEEEechhhccCC------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCc
Confidence 9999997653211 1234699999999888763 589999999999965321110 0111111112223
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
.+.+.+.+|||++++.++.+..+..|++++|-++.
T Consensus 217 ~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~ 251 (262)
T 3ksu_A 217 GNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGY 251 (262)
T ss_dssp CCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTC
T ss_pred ccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCc
Confidence 34567899999999999987444458888888775
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=100.64 Aligned_cols=157 Identities=11% Similarity=0.010 Sum_probs=110.2
Q ss_pred CeEEEEcCCCCHhhHHHHhC---------CCCEEEEcCcCCCCCC-------CCCCcchhhHHHHHHHHHHHHHhC--CC
Q 015570 17 MLELVECDLEKRVQIEPALG---------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAATIA--KV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~---------gvDvVI~~ag~~~~~~-------~d~~~~~~vnv~~~~~Ll~Aa~~a--gV 78 (404)
...++.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++... +.
T Consensus 43 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 122 (236)
T 1ooe_A 43 SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG 122 (236)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 46778899999988876654 7999999999753211 123345678999999999988763 22
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++||||++.++..... ..
T Consensus 123 g~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~--------~~ 188 (236)
T 1ooe_A 123 GLLQLTGAAAAMGPT------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW--------MP 188 (236)
T ss_dssp EEEEEECCGGGGSCC------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH--------ST
T ss_pred CEEEEECchhhccCC------CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhc--------CC
Confidence 489999998765432 2346899999999988863 258899999999976422100 00
Q ss_pred CccccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~~~~ 187 (404)
......++..+|+|++++.++..+ .+..++.+++.++.
T Consensus 189 ~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 189 NADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp TCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred CccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 111234678999999999777432 23348888888775
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.9e-09 Score=105.07 Aligned_cols=155 Identities=10% Similarity=-0.014 Sum_probs=107.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++. +.+.
T Consensus 101 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~ 180 (346)
T 3kvo_A 101 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKV 180 (346)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSS
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCC
Confidence 468899999999998887764 8999999999763221 1233457889999999988874 4566
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
.+||++||....... .......|+.+|..++.+.+. .|+.+..|+||++..... .........
T Consensus 181 g~IV~iSS~~~~~~~----~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~-------~~~~~~~~~ 249 (346)
T 3kvo_A 181 AHILNISPPLNLNPV----WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAA-------MDMLGGPGI 249 (346)
T ss_dssp CEEEEECCCCCCCGG----GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHH-------HHHHCC--C
T ss_pred CEEEEECCHHHcCCC----CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHH-------HHhhccccc
Confidence 799999998654321 112346899999999888763 479999999997332100 000111112
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEE
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVV 181 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~ 181 (404)
...+...+|||++++.++.+..+..|+++
T Consensus 250 ~~r~~~pedvA~~v~~L~s~~~~itG~~i 278 (346)
T 3kvo_A 250 ESQCRKVDIIADAAYSIFQKPKSFTGNFV 278 (346)
T ss_dssp GGGCBCTHHHHHHHHHHHTSCTTCCSCEE
T ss_pred cccCCCHHHHHHHHHHHHhcCCCCCceEE
Confidence 33467899999999999988443345554
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.92 E-value=3.6e-09 Score=99.16 Aligned_cols=158 Identities=12% Similarity=0.005 Sum_probs=110.8
Q ss_pred CeEEEEcCC--CCHhhHHHHhC-------CCCEEEEcCcCCCC--C--C---CCCCcchhhHHHHHHHHHHHH----HhC
Q 015570 17 MLELVECDL--EKRVQIEPALG-------NASVVICCIGASEK--E--V---FDITGPYRIDFQATKNLVDAA----TIA 76 (404)
Q Consensus 17 gveiV~gDl--~d~~~l~~aL~-------gvDvVI~~ag~~~~--~--~---~d~~~~~~vnv~~~~~Ll~Aa----~~a 76 (404)
++.++.+|+ .|.+++.++++ ++|+|||+||.... . . .++...+++|+.+..++++++ ++.
T Consensus 63 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 142 (252)
T 3f1l_A 63 QPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS 142 (252)
T ss_dssp CCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred CceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC
Confidence 688999999 88887776654 79999999997421 1 1 122345788999998888877 556
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
+..+||++||....... .....|+.+|..++.+.+. ..+.+..|+||++..+.... ....
T Consensus 143 ~~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~--------~~~~ 208 (252)
T 3f1l_A 143 DAGSLVFTSSSVGRQGR------ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRAS--------AFPT 208 (252)
T ss_dssp SSCEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHH--------HCTT
T ss_pred CCCEEEEECChhhccCC------CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhh--------hCCc
Confidence 77799999998764332 2246899999999988763 23889999999996532110 0011
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 188 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~ 188 (404)
.....+.+.+|||+++++++.+.. +..|+++++.++..
T Consensus 209 ~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~ 247 (252)
T 3f1l_A 209 EDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRK 247 (252)
T ss_dssp CCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC--
T ss_pred cchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcC
Confidence 112235788999999999997653 34578888887763
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.92 E-value=5e-09 Score=96.54 Aligned_cols=144 Identities=14% Similarity=0.073 Sum_probs=100.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCC----CEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----CCCEE
Q 015570 16 EMLELVECDLEKRVQIEPALGNA----SVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----KVNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gv----DvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----gVkrf 81 (404)
.++.++.+|+.|.+++.++++.+ |+|||++|...... .++...+++|+.+..++++++... +. +|
T Consensus 47 ~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~i 125 (230)
T 3guy_A 47 NNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NV 125 (230)
T ss_dssp SCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EE
T ss_pred hccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eE
Confidence 57889999999999999888654 99999999763221 123345688999999988887653 33 89
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcccc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 154 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~ 154 (404)
|++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..... .......
T Consensus 126 v~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~ 191 (230)
T 3guy_A 126 VMIMSTAAQQPK------AQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETS--------GKSLDTS 191 (230)
T ss_dssp EEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----------------------
T ss_pred EEEeecccCCCC------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhc--------CCCCCcc
Confidence 999998765432 2346899999999988763 489999999999975422110 1111234
Q ss_pred CcccHHHHHHHHHHHHhCCC
Q 015570 155 GQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~ 174 (404)
.+++.+|+|++++.++.++.
T Consensus 192 ~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 192 SFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp -CCCHHHHHHHHHHHCCEET
T ss_pred cCCCHHHHHHHHHHHHhCcC
Confidence 57899999999999997544
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.92 E-value=4e-09 Score=98.84 Aligned_cols=145 Identities=8% Similarity=-0.032 Sum_probs=101.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
.++.++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+..
T Consensus 59 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g 138 (250)
T 3nyw_A 59 QEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNG 138 (250)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 578999999999988877654 7999999999864321 123345678888888888876 445667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+..... .....
T Consensus 139 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~ 204 (250)
T 3nyw_A 139 YIFNVASRAAKYGF------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA--------GTPFK 204 (250)
T ss_dssp EEEEECC-------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT--------TCCSC
T ss_pred EEEEEccHHhcCCC------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc--------CCCcc
Confidence 99999998764321 1246799999999887763 589999999999975321100 01112
Q ss_pred ccCcccHHHHHHHHHHHHhCCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...+++.+|+|++++.++..+.
T Consensus 205 ~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 205 DEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp GGGSBCHHHHHHHHHHHHTSCT
T ss_pred cccCCCHHHHHHHHHHHHcCCC
Confidence 2347899999999999998665
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=4e-09 Score=97.95 Aligned_cols=142 Identities=15% Similarity=0.047 Sum_probs=100.5
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh----CCCC
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~----agVk 79 (404)
++.++.+|++|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++.. .+ .
T Consensus 50 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~ 128 (235)
T 3l6e_A 50 AVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-G 128 (235)
T ss_dssp GEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-E
T ss_pred CceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence 58999999999988877664 789999999985321 123344578899999888887743 33 2
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+.... ... ..
T Consensus 129 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~-------~~ 193 (235)
T 3l6e_A 129 VLANVLSSAAQVGK------ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN--TDH-------VD 193 (235)
T ss_dssp EEEEECCEECCSSC------SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------
T ss_pred EEEEEeCHHhcCCC------CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc--cCC-------CC
Confidence 89999998664432 2246899999999988763 57999999999996542211 000 11
Q ss_pred ccCcccHHHHHHHHHHHHhCCC
Q 015570 153 FGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...+++.+|+|++++.++.++.
T Consensus 194 ~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 194 PSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp ---CBCHHHHHHHHHHHTCCCS
T ss_pred CcCCCCHHHHHHHHHHHHhCCC
Confidence 2356899999999999998655
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.4e-09 Score=97.85 Aligned_cols=157 Identities=13% Similarity=0.060 Sum_probs=93.5
Q ss_pred CCeEEEEcCCCCHhhH---HHH---hCCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCCC
Q 015570 16 EMLELVECDLEKRVQI---EPA---LGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l---~~a---L~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agVk 79 (404)
.+++++.+|+.+.+.. ... +.++|+|||+||...... .++...+++|+.+..++++++. +.+ .
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g 126 (245)
T 3e9n_A 48 EGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-G 126 (245)
T ss_dssp TTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred cCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C
Confidence 5789999999887431 122 347999999999864321 1233446788888777766653 434 6
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+++|+||++.++..... .........
T Consensus 127 ~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~ 196 (245)
T 3e9n_A 127 CVIYINSGAGNGPH------PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL----MDSQGTNFR 196 (245)
T ss_dssp EEEEEC----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------C
T ss_pred eEEEEcCcccccCC------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh----hhhhhcccc
Confidence 89999998765432 2346899999999988863 589999999999987533211 000111112
Q ss_pred ccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEc
Q 015570 153 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 185 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~ 185 (404)
...+++.+|||++++.++.++.. +.++++.-
T Consensus 197 ~~~~~~p~dvA~~i~~l~~~~~~--~~~~~i~~ 227 (245)
T 3e9n_A 197 PEIYIEPKEIANAIRFVIDAGET--TQITNVDV 227 (245)
T ss_dssp CGGGSCHHHHHHHHHHHHTSCTT--EEEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHcCCCc--cceeeeEE
Confidence 23478999999999999987763 56777653
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.9e-09 Score=97.75 Aligned_cols=158 Identities=10% Similarity=0.027 Sum_probs=109.6
Q ss_pred cCCCCHhhHHHHhC---CCCEEEEcCcCCC-CC------CCCCCcchhhHHHHHHHHHHHHHhCC--CCEEEEeccCccc
Q 015570 23 CDLEKRVQIEPALG---NASVVICCIGASE-KE------VFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTN 90 (404)
Q Consensus 23 gDl~d~~~l~~aL~---gvDvVI~~ag~~~-~~------~~d~~~~~~vnv~~~~~Ll~Aa~~ag--VkrfI~vSS~gv~ 90 (404)
+|++|.+++.++++ ++|+|||++|... .. ..++...+++|+.+..++++++...- ..+||++||....
T Consensus 42 ~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~ 121 (223)
T 3uce_A 42 LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR 121 (223)
T ss_dssp CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT
T ss_pred cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc
Confidence 79999998887764 7999999999762 11 11233446789999999999987642 2389999998765
Q ss_pred CCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCccCccc----EEEccCCccccCcccHHH
Q 015570 91 KFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHN----ITLSQEDTLFGGQVSNLQ 161 (404)
Q Consensus 91 ~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~~~~~----i~~~~~~~~~~~~Is~~D 161 (404)
... .....|+.+|..++.+.+. ..+.+..|+||++..+......... ..........+.+.+.+|
T Consensus 122 ~~~------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 195 (223)
T 3uce_A 122 KVV------ANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASD 195 (223)
T ss_dssp SCC------TTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHH
T ss_pred cCC------CCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHH
Confidence 432 2346899999999988763 2389999999999865322111000 000111122345789999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 162 VAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 162 VA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
||++++.++.+. +..++++++.++.
T Consensus 196 vA~~~~~l~~~~-~~tG~~i~vdgG~ 220 (223)
T 3uce_A 196 IAMAYLFAIQNS-YMTGTVIDVDGGA 220 (223)
T ss_dssp HHHHHHHHHHCT-TCCSCEEEESTTG
T ss_pred HHHHHHHHccCC-CCCCcEEEecCCe
Confidence 999999999853 3568899888774
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.89 E-value=4e-09 Score=102.65 Aligned_cols=152 Identities=11% Similarity=-0.028 Sum_probs=100.4
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC-------
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA------- 76 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a------- 76 (404)
++.++.+|++|.+++..+++ ++|+|||+||...... .++...+++|+.++.++++++...
T Consensus 60 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 139 (319)
T 3ioy_A 60 EVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKA 139 (319)
T ss_dssp GEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhc
Confidence 78999999999998887764 6799999999753221 223345788999999988877542
Q ss_pred ---CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCCCCccCccc--E
Q 015570 77 ---KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--I 144 (404)
Q Consensus 77 ---gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~~~~~~~~~--i 144 (404)
+..+||++||....... .....|+.+|..++.+.+ ..|+.+++|+||++.++......... +
T Consensus 140 ~~~~~g~iV~isS~a~~~~~------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~ 213 (319)
T 3ioy_A 140 GEQKGGHVVNTASMAAFLAA------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDAL 213 (319)
T ss_dssp TSCCCCEEEEECCGGGTCCC------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--------------
T ss_pred cCCCCcEEEEecccccccCC------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhh
Confidence 24589999998765432 224679999996665554 25899999999999765332111000 0
Q ss_pred E----------EccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 145 T----------LSQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 145 ~----------~~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
. +..........++.+|+|+.++.+++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 214 KGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp ---------------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred cccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 0 00000111123799999999999998765
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.89 E-value=9.1e-10 Score=104.90 Aligned_cols=165 Identities=9% Similarity=0.080 Sum_probs=113.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
.++.++.+|+.|.+++..+++ ++|++||+||...... .++...+++|+.+..++++++ ++.+..
T Consensus 82 ~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g 161 (275)
T 4imr_A 82 GTAQELAGDLSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWG 161 (275)
T ss_dssp CCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 578999999999988877764 7999999999753221 123344678999998888876 445667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC---cccEEEccC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---THNITLSQE 149 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~---~~~i~~~~~ 149 (404)
+||++||....... .....|+.+|..++.+.+. .|+.+..|+||++..+...... .........
T Consensus 162 ~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 235 (275)
T 4imr_A 162 RVVSIGSINQLRPK------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVR 235 (275)
T ss_dssp EEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHH
T ss_pred EEEEECCHHhCCCC------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHh
Confidence 99999998765422 2345799999999888763 4899999999999764211000 000000000
Q ss_pred Cc-cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 150 DT-LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~-~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.. ..+.+...+|||++++.++.+. .+..|++++|.++
T Consensus 236 ~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 236 TLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp HHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred hcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 01 2334678999999999999764 3345788887665
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.88 E-value=4.4e-09 Score=107.45 Aligned_cols=165 Identities=13% Similarity=0.057 Sum_probs=111.4
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------C-CCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC----CC
Q 015570 17 MLELVECDLEKRVQIEPALG-------N-ASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----KV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------g-vDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a----gV 78 (404)
+++++.+|++|.+++.++++ + +|+|||+||...... .++...+++|+.+..+|.+++... +.
T Consensus 260 ~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~ 339 (454)
T 3u0b_A 260 GGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEG 339 (454)
T ss_dssp TCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTT
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Confidence 56799999999988877654 4 999999999864321 123344788999999999998875 56
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.++.|+||++..+.................
T Consensus 340 g~iV~iSS~a~~~g~------~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 413 (454)
T 3u0b_A 340 GRVIGLSSMAGIAGN------RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLN 413 (454)
T ss_dssp CEEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSB
T ss_pred CEEEEEeChHhCCCC------CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhc
Confidence 799999998653221 1236799999988776652 689999999999976532211000000000011
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+...+|||+++++++... .+..++++++.++.
T Consensus 414 ~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 414 SLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp TTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred cccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence 1223568899999999999754 33457888887764
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.8e-09 Score=99.10 Aligned_cols=157 Identities=10% Similarity=0.042 Sum_probs=110.6
Q ss_pred CeEEEEcCCCCHhhHHHHhC---------CCCEEEEcCcCCCCCC-------CCCCcchhhHHHHHHHHHHHHHhC--CC
Q 015570 17 MLELVECDLEKRVQIEPALG---------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAATIA--KV 78 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~---------gvDvVI~~ag~~~~~~-------~d~~~~~~vnv~~~~~Ll~Aa~~a--gV 78 (404)
+..++.+|++|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++... +-
T Consensus 47 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 126 (241)
T 1dhr_A 47 ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG 126 (241)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC
Confidence 45778899999988877654 7999999999753211 122344678999999999988763 12
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+..... . .
T Consensus 127 g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~-------~-~ 192 (241)
T 1dhr_A 127 GLLTLAGAKAALDGT------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS-------M-P 192 (241)
T ss_dssp EEEEEECCGGGGSCC------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH-------S-T
T ss_pred CEEEEECCHHHccCC------CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccccc-------C-c
Confidence 489999998765432 2346899999999988863 358899999999865321100 0 0
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
...+..++..+|+|++++.++.+.. ...|+.+++.++.
T Consensus 193 ~~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 193 EADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp TSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred chhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence 1112345789999999999997643 2347888887765
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.85 E-value=6.7e-09 Score=107.67 Aligned_cols=169 Identities=14% Similarity=0.051 Sum_probs=117.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCCC---C---CCCcchhhHHHHHHHHHHHHHhC-CCCEEEEecc
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKEV---F---DITGPYRIDFQATKNLVDAATIA-KVNHFIMVSS 86 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~~---~---d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS 86 (404)
.+++++.||+.|.+.+..++++ +|+||||+|...... . ++...+++|+.++.+|++++... +..+||++||
T Consensus 312 ~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS 391 (511)
T 2z5l_A 312 CEVVHAACDVAERDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSS 391 (511)
T ss_dssp CEEEEEECCSSCHHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEE
T ss_pred CEEEEEEeCCCCHHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence 3588999999999999999865 999999999864321 1 12234578999999999999877 7889999999
Q ss_pred CcccCCCCchhhcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHH
Q 015570 87 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA 163 (404)
Q Consensus 87 ~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA 163 (404)
....... .....|+.+|..+|.+.+ ..|+++++|++|.+.+.+.... .....+. ......++.+|++
T Consensus 392 ~a~~~g~------~g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~-~~~~~~~---~~g~~~l~~e~~a 461 (511)
T 2z5l_A 392 VTGTWGN------AGQGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAG-AGEESLS---RRGLRAMDPDAAV 461 (511)
T ss_dssp GGGTTCC------TTBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCC-HHHHHHH---HHTBCCBCHHHHH
T ss_pred HHhcCCC------CCCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCccccc-ccHHHHH---hcCCCCCCHHHHH
Confidence 8542211 123679999999998776 4799999999998843221100 0000000 1112468999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccc
Q 015570 164 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204 (404)
Q Consensus 164 ~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~ 204 (404)
+++..++..+.. .+ ++.. ++|..+...+...
T Consensus 462 ~~l~~al~~~~~----~v-~v~~-----~d~~~~~~~~~~~ 492 (511)
T 2z5l_A 462 DALLGAMGRNDV----CV-TVVD-----VDWERFAPATNAI 492 (511)
T ss_dssp HHHHHHHHHTCS----EE-EECC-----BCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC----EE-EEEe-----CCHHHHHhhhccc
Confidence 999999986552 22 2333 6787777665543
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.3e-08 Score=96.66 Aligned_cols=154 Identities=9% Similarity=0.022 Sum_probs=104.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.++.++.+|++|.+++.++++ ++|++||+||...... .++...+++|+.+..++++++. +.+.
T Consensus 62 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 141 (274)
T 3e03_A 62 GQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPN 141 (274)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCC
Confidence 467899999999988877654 8999999999763221 1233446789999988888764 3456
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+||++||....... .......|+.+|..++.+.+. .|+.+..|+||++..-... ... ...
T Consensus 142 g~iv~isS~~~~~~~----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-------~~~-~~~ 209 (274)
T 3e03_A 142 PHILTLAPPPSLNPA----WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-------NML-PGV 209 (274)
T ss_dssp CEEEECCCCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------------CC
T ss_pred ceEEEECChHhcCCC----CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-------hhc-ccc
Confidence 799999998654320 012346799999999988763 5899999999964321110 011 111
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCC-CCcEE
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLS-YCKVV 181 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~-~~~i~ 181 (404)
....+.+.+|||++++.++...... .|+++
T Consensus 210 ~~~~~~~pedvA~~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 210 DAAACRRPEIMADAAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp CGGGSBCTHHHHHHHHHHHTSCCTTCCSCEE
T ss_pred cccccCCHHHHHHHHHHHhCccccccCCeEE
Confidence 1223678999999999999865432 34555
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.81 E-value=7.7e-09 Score=100.98 Aligned_cols=153 Identities=13% Similarity=0.082 Sum_probs=104.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC-----CCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCCCE
Q 015570 16 EMLELVECDLEKRVQIEPALGN-----ASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g-----vDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agVkr 80 (404)
.+++++.+|++|.+++.++++. +|+|||+||..... ..++...+++|+.++.++++++ ++.+..+
T Consensus 57 ~~~~~~~~Dv~d~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~ 136 (327)
T 1jtv_A 57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGR 136 (327)
T ss_dssp TSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CceEEEEecCCCHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCE
Confidence 5789999999999999988764 89999999975321 1123445788999999988885 4556789
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc-cEEEcc-CC-
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITLSQ-ED- 150 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~-~i~~~~-~~- 150 (404)
||++||....... .....|+.+|..++.+.+. .|+.+++|+||++..+........ ...+.. ..
T Consensus 137 IV~isS~~~~~~~------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1jtv_A 137 VLVTGSVGGLMGL------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIH 210 (327)
T ss_dssp EEEEEEGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHH
T ss_pred EEEECCcccccCC------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHH
Confidence 9999998764322 2246799999999988763 589999999999976532110000 000000 00
Q ss_pred -------------ccccC-cccHHHHHHHHHHHHhCCC
Q 015570 151 -------------TLFGG-QVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 151 -------------~~~~~-~Is~~DVA~ai~~~l~~~~ 174 (404)
..++. .++.+|||++++.++..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~ 248 (327)
T 1jtv_A 211 TFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK 248 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCC
Confidence 00011 2589999999999998644
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.81 E-value=1.1e-08 Score=97.43 Aligned_cols=144 Identities=13% Similarity=0.052 Sum_probs=101.0
Q ss_pred CeEEEEcCCCCHhhHHHHhC-------CCCEEEEc-CcCCCCCC-----CCCCcchhhHHHHHHHHHHHHHhC---CCCE
Q 015570 17 MLELVECDLEKRVQIEPALG-------NASVVICC-IGASEKEV-----FDITGPYRIDFQATKNLVDAATIA---KVNH 80 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~-------gvDvVI~~-ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa~~a---gVkr 80 (404)
+++++.+|++|.+++..+++ ++|+|||+ +|...... .++...+++|+.+..++++++... +..+
T Consensus 79 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~ 158 (286)
T 1xu9_A 79 SAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGS 158 (286)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred ceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCE
Confidence 68899999999988877654 89999999 56543211 112334678999998888877542 2369
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---------HCCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
||++||....... .....|+.+|..++.+++ ..|+.+++|+||++..+.... .+ .+.
T Consensus 159 iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~----~~----~~~ 224 (286)
T 1xu9_A 159 IVVVSSLAGKVAY------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK----AV----SGI 224 (286)
T ss_dssp EEEEEEGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH----HS----CGG
T ss_pred EEEECCcccccCC------CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHH----hc----ccc
Confidence 9999998764332 234689999999887764 248999999999997542110 00 011
Q ss_pred cccCcccHHHHHHHHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.....++.+|+|+.++.++....
T Consensus 225 ~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 225 VHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp GGGGCBCHHHHHHHHHHHHHTTC
T ss_pred ccCCCCCHHHHHHHHHHHHhcCC
Confidence 12346899999999999998654
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=2.2e-08 Score=93.75 Aligned_cols=147 Identities=16% Similarity=0.062 Sum_probs=98.6
Q ss_pred hCCCCEEEEcCcCC-CCCC------CCCCcchhhHHHHHHHHHHHHH----hCCCCEEEEeccCcccCCCCchhhcccch
Q 015570 35 LGNASVVICCIGAS-EKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAILNLFW 103 (404)
Q Consensus 35 L~gvDvVI~~ag~~-~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI~vSS~gv~~~~~~~~~~~~~~ 103 (404)
+.++|+|||+||.. .... .++...+++|+.+..++++++. +.+..+||++||....... ....
T Consensus 70 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------~~~~ 143 (254)
T 1zmt_A 70 YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW------KELS 143 (254)
T ss_dssp HSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC------TTCH
T ss_pred hCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC------CCch
Confidence 45899999999976 2211 1233456788888888877764 4466799999998765432 2346
Q ss_pred HHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEE-------EccCCccccCcccHHHHHHHHHH
Q 015570 104 GVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNIT-------LSQEDTLFGGQVSNLQVAELLAC 168 (404)
Q Consensus 104 ~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~-------~~~~~~~~~~~Is~~DVA~ai~~ 168 (404)
.|+.+|..++.+.+. .|+.+++||||+++|+..... .+.... ........+.+.+.+|||++++.
T Consensus 144 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 223 (254)
T 1zmt_A 144 TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAF 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 899999999887763 589999999999977543211 110000 00001122346799999999999
Q ss_pred HHhCCC-CCCCcEEEEEcCC
Q 015570 169 MAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 169 ~l~~~~-~~~~~i~nI~~~~ 187 (404)
++.+.. +..++++++.++.
T Consensus 224 l~s~~~~~~tG~~~~vdgG~ 243 (254)
T 1zmt_A 224 LASGSCDYLTGQVFWLAGGF 243 (254)
T ss_dssp HHTTSCGGGTTCEEEESTTC
T ss_pred HhCcccCCccCCEEEECCCc
Confidence 997654 3357888887774
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=4.3e-08 Score=93.38 Aligned_cols=166 Identities=11% Similarity=-0.017 Sum_probs=111.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC----C-------CCCcchhhHHHHHHHHHHHHHhC-
Q 015570 16 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV----F-------DITGPYRIDFQATKNLVDAATIA- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~----~-------d~~~~~~vnv~~~~~Ll~Aa~~a- 76 (404)
.++.++.+|++|.+++.++++ ++|++||+||...... . ++...+++|+.+..++++++...
T Consensus 51 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~ 130 (281)
T 3zv4_A 51 GNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPAL 130 (281)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 578999999999988776653 7899999999753210 0 12334678999998888877532
Q ss_pred --CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcc----cE
Q 015570 77 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETH----NI 144 (404)
Q Consensus 77 --gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~----~i 144 (404)
+-.++|++||....... .....|+.+|..++.+.+. .++.+..|+||++..+........ .+
T Consensus 131 ~~~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~ 204 (281)
T 3zv4_A 131 VSSRGSVVFTISNAGFYPN------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSI 204 (281)
T ss_dssp HHHTCEEEEECCGGGTSSS------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC------
T ss_pred HhcCCeEEEEecchhccCC------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccc
Confidence 12589999998764332 2245799999999988863 348999999999976532211000 00
Q ss_pred E------EccCCccccCcccHHHHHHHHHHHHhC-CC-CCCCcEEEEEcCC
Q 015570 145 T------LSQEDTLFGGQVSNLQVAELLACMAKN-RS-LSYCKVVEVIAET 187 (404)
Q Consensus 145 ~------~~~~~~~~~~~Is~~DVA~ai~~~l~~-~~-~~~~~i~nI~~~~ 187 (404)
. ........+.+...+|||++++.++.+ .. +..|++++|.++.
T Consensus 205 ~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 205 SSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGM 255 (281)
T ss_dssp --CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred cchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence 0 001112234567899999999999973 32 2458899888774
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.9e-08 Score=94.46 Aligned_cols=152 Identities=11% Similarity=0.070 Sum_probs=95.7
Q ss_pred CCeEEEEcCCCCHhhHHHHh--------CCCCEEEEcCcC--C--------CCCCCC---CCcchhhHHHHHHHHHHH--
Q 015570 16 EMLELVECDLEKRVQIEPAL--------GNASVVICCIGA--S--------EKEVFD---ITGPYRIDFQATKNLVDA-- 72 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL--------~gvDvVI~~ag~--~--------~~~~~d---~~~~~~vnv~~~~~Ll~A-- 72 (404)
.++.++.+|++|.+++.+++ .++|+|||+||. . .....+ +...+.+|+.+..+++++
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 133 (260)
T 2qq5_A 54 GQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGA 133 (260)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHH
Confidence 36889999999998877654 467999999952 1 111112 223345666666555544
Q ss_pred --HHhCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Ccc
Q 015570 73 --ATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETH 142 (404)
Q Consensus 73 --a~~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~ 142 (404)
+++.+..+||++||....... ....|+.+|..++.+.+. .|+.+++|+||++..+..... ...
T Consensus 134 ~~~~~~~~g~iv~isS~~~~~~~-------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~ 206 (260)
T 2qq5_A 134 RLMVPAGQGLIVVISSPGSLQYM-------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE 206 (260)
T ss_dssp HHHGGGTCCEEEEECCGGGTSCC-------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------
T ss_pred HHHhhcCCcEEEEEcChhhcCCC-------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc
Confidence 445667899999998765421 236799999999988763 589999999999976532110 000
Q ss_pred cE---EEcc-CCccccCcccHHHHHHHHHHHHhCCC
Q 015570 143 NI---TLSQ-EDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 143 ~i---~~~~-~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.. .... ....+......+|+|++++.++.+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 207 EVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPN 242 (260)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHTCTT
T ss_pred cccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCcc
Confidence 00 0000 00111123578999999999997754
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=93.24 Aligned_cols=154 Identities=11% Similarity=-0.013 Sum_probs=105.6
Q ss_pred CCeEEEEcCC--CCHhhHHHHhC-------CCCEEEEcCcCCCCC-------CCCCCcchhhHHHHHHHHHHHH----Hh
Q 015570 16 EMLELVECDL--EKRVQIEPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TI 75 (404)
Q Consensus 16 ~gveiV~gDl--~d~~~l~~aL~-------gvDvVI~~ag~~~~~-------~~d~~~~~~vnv~~~~~Ll~Aa----~~ 75 (404)
.++.++.+|+ .|.+++.++++ ++|+|||+||..... ..++...+++|+.+..++++++ ++
T Consensus 64 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 143 (247)
T 3i1j_A 64 PQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKR 143 (247)
T ss_dssp CCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 5677888888 88877766553 899999999975221 1223345688999999988887 45
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH--------CCCCEEEEEcCccCCCCCCccCcccEEEc
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA--------SGLPYTIVRPGGMERPTDAYKETHNITLS 147 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~--------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~ 147 (404)
.+..+||++||....... ..+..|+.+|..++.+.+. .|+.+..|+||++..+.... .
T Consensus 144 ~~~~~iv~isS~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~--------~ 209 (247)
T 3i1j_A 144 SEDASIAFTSSSVGRKGR------ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQ--------A 209 (247)
T ss_dssp SSSEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHH--------H
T ss_pred CCCCeEEEEcchhhcCCC------CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchh--------c
Confidence 566799999998664332 2346899999999988752 47889999999996532110 0
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEE
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEV 183 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI 183 (404)
........+...+|||++++.++.+.. +..|+++++
T Consensus 210 ~~~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 210 YPDENPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp STTSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred ccccCccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence 011112235688999999999997543 234566553
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=5e-09 Score=98.33 Aligned_cols=161 Identities=12% Similarity=0.073 Sum_probs=106.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---------CCC--EEEEcCcCCCC---------CCCCCCcchhhHHHHHHHHHHHHHh
Q 015570 16 EMLELVECDLEKRVQIEPALG---------NAS--VVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATI 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---------gvD--vVI~~ag~~~~---------~~~d~~~~~~vnv~~~~~Ll~Aa~~ 75 (404)
.++.++.+|++|.+++.++++ ++| +|||+||.... ...++...+++|+.+..++++++..
T Consensus 60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 139 (259)
T 1oaa_A 60 LKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLN 139 (259)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458899999999988876653 468 99999997532 1122344578899999999998865
Q ss_pred C------CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCccC----
Q 015570 76 A------KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE---- 140 (404)
Q Consensus 76 a------gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~~---- 140 (404)
. +..+||++||....... .....|+.+|..++.+.+. .++.+..|+||++..+......
T Consensus 140 ~~~~~~~~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~ 213 (259)
T 1oaa_A 140 AFQDSPGLSKTVVNISSLCALQPY------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSK 213 (259)
T ss_dssp TSCCCTTCEEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCS
T ss_pred HHhhccCCCceEEEEcCchhcCCC------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccC
Confidence 3 33579999998765432 2346899999999988763 3588999999998643211000
Q ss_pred cccE-EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEE
Q 015570 141 THNI-TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE 182 (404)
Q Consensus 141 ~~~i-~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~n 182 (404)
.... .........+.+.+.+|+|++++.++....+..|++++
T Consensus 214 ~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~ 256 (259)
T 1oaa_A 214 DPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVD 256 (259)
T ss_dssp CHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEE
T ss_pred ChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEe
Confidence 0000 00000011234689999999999999764444455554
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.8e-07 Score=87.93 Aligned_cols=161 Identities=9% Similarity=0.006 Sum_probs=112.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 15 VEMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
..++..+.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+.+++. +.+
T Consensus 46 ~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 125 (247)
T 3ged_A 46 RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK 125 (247)
T ss_dssp CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC
Confidence 457899999999998877654 48999999999764321 2344556788888887776654 444
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.++|++||....... .....|..+|..+..+.+. .|+.+..|.||++..+...... .......
T Consensus 126 -G~IInisS~~~~~~~------~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~----~~~~~~~ 194 (247)
T 3ged_A 126 -GRIINIASTRAFQSE------PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFT----QEDCAAI 194 (247)
T ss_dssp -CEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CC----HHHHHTS
T ss_pred -CcEEEEeecccccCC------CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHH----HHHHhcC
Confidence 589999998764332 1236799999998877763 5899999999998643221100 0001112
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
..+.+...+|||++++.++.. .+.-|+++.|-++-
T Consensus 195 Pl~R~g~pediA~~v~fL~s~-~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 195 PAGKVGTPKDISNMVLFLCQQ-DFITGETIIVDGGM 229 (247)
T ss_dssp TTSSCBCHHHHHHHHHHHHHC-SSCCSCEEEESTTG
T ss_pred CCCCCcCHHHHHHHHHHHHhC-CCCCCCeEEECcCH
Confidence 334467899999999999975 45568899887774
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.67 E-value=9.5e-08 Score=91.17 Aligned_cols=152 Identities=11% Similarity=0.020 Sum_probs=103.5
Q ss_pred CCeEEEEcCCCCH-hhHHHHh-------CCCCEEEEcCcCCCCC------------------------------------
Q 015570 16 EMLELVECDLEKR-VQIEPAL-------GNASVVICCIGASEKE------------------------------------ 51 (404)
Q Consensus 16 ~gveiV~gDl~d~-~~l~~aL-------~gvDvVI~~ag~~~~~------------------------------------ 51 (404)
.+++++.+|+.|. +.+..++ .++|+|||+||.....
T Consensus 62 ~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (311)
T 3o26_A 62 ENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSET 141 (311)
T ss_dssp CSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECC
T ss_pred CceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccc
Confidence 5799999999997 6666554 4899999999976321
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH----hCCCCEEEEeccCcccCCCCc--------------------------------
Q 015570 52 VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP-------------------------------- 95 (404)
Q Consensus 52 ~~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI~vSS~gv~~~~~~-------------------------------- 95 (404)
..++...+++|+.+..+|++++. +.+..|||++||.........
T Consensus 142 ~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (311)
T 3o26_A 142 YELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKE 221 (311)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhc
Confidence 01112336889999888777764 456679999999865321100
Q ss_pred -----hhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHH
Q 015570 96 -----AAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 165 (404)
Q Consensus 96 -----~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~a 165 (404)
.........|+.+|..++.+.+. .++.+..|+||++..+.... ......++.|+.
T Consensus 222 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~---------------~~~~~~~~~a~~ 286 (311)
T 3o26_A 222 NLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG---------------IGNYTAEEGAEH 286 (311)
T ss_dssp TCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT---------------CCSBCHHHHHHH
T ss_pred cccccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC---------------CCCCCHHHHHHH
Confidence 00012346799999999988864 46899999999996542110 123688999999
Q ss_pred HHHHHhCCCCCCCcEEE
Q 015570 166 LACMAKNRSLSYCKVVE 182 (404)
Q Consensus 166 i~~~l~~~~~~~~~i~n 182 (404)
++.++..+....+..|-
T Consensus 287 ~~~~~~~~~~~~~g~~~ 303 (311)
T 3o26_A 287 VVRIALFPDDGPSGFFY 303 (311)
T ss_dssp HHHHHTCCSSCCCSCEE
T ss_pred HHHHHhCCCCCCCceEe
Confidence 99998766543444443
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.66 E-value=7.4e-08 Score=90.29 Aligned_cols=166 Identities=12% Similarity=0.047 Sum_probs=112.4
Q ss_pred CCCCeEEEEcCCCCHhhHHHHh---CCCCEEEEcCcCCCCC----CCCCCcchhhHHHHHHHHHHHHH----hCCCCEEE
Q 015570 14 PVEMLELVECDLEKRVQIEPAL---GNASVVICCIGASEKE----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFI 82 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL---~gvDvVI~~ag~~~~~----~~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI 82 (404)
...++..+.+|++|.+++++++ .++|++||+||..... ..+|...+++|+.+...+++++. +.+ .++|
T Consensus 52 ~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IV 130 (242)
T 4b79_A 52 RHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSIL 130 (242)
T ss_dssp CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEE
T ss_pred hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEE
Confidence 4568999999999998888765 4899999999976321 12344556788888877776654 334 5899
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc--ccEEEccCCccc
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLF 153 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--~~i~~~~~~~~~ 153 (404)
++||....... .....|..+|..+..+.+. .|+.+..|.||++..+....... ...........+
T Consensus 131 nisS~~~~~~~------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Pl 204 (242)
T 4b79_A 131 NIASMYSTFGS------ADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPL 204 (242)
T ss_dssp EECCGGGTSCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTT
T ss_pred EEeeccccCCC------CCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCC
Confidence 99998764332 1235799999999887763 68999999999997543211100 000011112233
Q ss_pred cCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 154 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
+.+-..+|||+++++++.+.. +.-|+++.|-++
T Consensus 205 gR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 205 ARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGG 238 (242)
T ss_dssp CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCchhcCccCceEEECcc
Confidence 456789999999999996543 345778877666
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=4.3e-08 Score=95.43 Aligned_cols=150 Identities=13% Similarity=0.001 Sum_probs=102.7
Q ss_pred EEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCCCEEEE
Q 015570 21 VECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIM 83 (404)
Q Consensus 21 V~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agVkrfI~ 83 (404)
+.+|+.+.+++..++ .++|+|||+||..... ..++...+++|+.+..+|++++ ++.+..|||+
T Consensus 69 ~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~ 148 (319)
T 1gz6_A 69 AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIM 148 (319)
T ss_dssp EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 358999987765543 4799999999976432 1123445788999988887776 4456679999
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCc
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ 156 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~ 156 (404)
+||....... .....|+.+|..++.+.+. .|+.+++|+||++ ..... ..+ ......+
T Consensus 149 vsS~~~~~~~------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~----~~~-----~~~~~~~ 212 (319)
T 1gz6_A 149 TASASGIYGN------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE----TVM-----PEDLVEA 212 (319)
T ss_dssp ECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG----GGS-----CHHHHHH
T ss_pred ECChhhccCC------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc----ccC-----Chhhhcc
Confidence 9997542211 1246799999999887753 5899999999987 22111 000 0011234
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 157 VSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 157 Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
++.+|+|++++.++.......+++|++.++
T Consensus 213 ~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 213 LKPEYVAPLVLWLCHESCEENGGLFEVGAG 242 (319)
T ss_dssp SCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred CCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence 688999999999997755445788887665
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.63 E-value=4.8e-08 Score=92.24 Aligned_cols=164 Identities=11% Similarity=0.066 Sum_probs=110.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC----------CCCEEEEcCcCCCC-----C------CCCCCcchhhHHHHHHHHHHHHH
Q 015570 16 EMLELVECDLEKRVQIEPALG----------NASVVICCIGASEK-----E------VFDITGPYRIDFQATKNLVDAAT 74 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~----------gvDvVI~~ag~~~~-----~------~~d~~~~~~vnv~~~~~Ll~Aa~ 74 (404)
.++.++.+|++|.+++.++++ ++|+|||+||.... . ..++...+++|+.+..++++++.
T Consensus 56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 135 (269)
T 2h7i_A 56 AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALL 135 (269)
T ss_dssp SCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred CCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 367899999999998887765 79999999997541 1 11223346789999999999986
Q ss_pred hC--CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----C
Q 015570 75 IA--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----E 140 (404)
Q Consensus 75 ~a--gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-----~ 140 (404)
.. .-.+||++||.+.... ..+..|+.+|..++.+.+. .|+.+..|+||++..+..... .
T Consensus 136 ~~~~~~g~iv~iss~~~~~~-------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~ 208 (269)
T 2h7i_A 136 PIMNPGGSIVGMDFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALG 208 (269)
T ss_dssp GGEEEEEEEEEEECCCSSCC-------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTC
T ss_pred HhhccCCeEEEEcCcccccc-------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccch
Confidence 53 1248999998765321 2346799999999887753 589999999999865321100 0
Q ss_pred cc------cE-EEccCCcccc-CcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 141 TH------NI-TLSQEDTLFG-GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 141 ~~------~i-~~~~~~~~~~-~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.. .+ .........+ .+...+|||++++.++.+.. +.-|+++.+.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 263 (269)
T 2h7i_A 209 EEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263 (269)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred hhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence 00 00 0000011122 35688999999999997643 334677777666
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.3e-07 Score=89.19 Aligned_cols=165 Identities=12% Similarity=0.044 Sum_probs=110.6
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++..+.+|++|.+++.+++ .++|++||+||.... . ..+|...+++|+.+...+++++ ++.+
T Consensus 56 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 135 (254)
T 4fn4_A 56 KEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG 135 (254)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 46889999999998887664 489999999996531 1 1234445678888877766655 4455
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cc--cEE-E
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-TH--NIT-L 146 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~--~i~-~ 146 (404)
-.++|++||....... .....|..+|..+..+.+. .|+.+..|.||++..+...... .. ... +
T Consensus 136 ~G~IVnisS~~g~~~~------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 209 (254)
T 4fn4_A 136 KGVIVNTASIAGIRGG------FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTL 209 (254)
T ss_dssp CEEEEEECCGGGTCSS------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHH
T ss_pred CcEEEEEechhhcCCC------CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHH
Confidence 5699999998764332 1235799999999887763 6899999999998654221110 00 000 0
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.......+.+...+|||++++.++.+.. +.-|+++.|-++
T Consensus 210 ~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG 250 (254)
T 4fn4_A 210 TKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGG 250 (254)
T ss_dssp HHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCC
Confidence 0000122345689999999999996543 345778877766
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=9.5e-08 Score=98.60 Aligned_cols=170 Identities=14% Similarity=0.085 Sum_probs=116.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCC-CCCCC------CCCcchhhHHHHHHHHHHHHHhCCCCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGAS-EKEVF------DITGPYRIDFQATKNLVDAATIAKVNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~-~~~~~------d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI 82 (404)
.++.++.+|+.|.+++..+++ .+|+|||++|.. ..... ++...+++|+.++.+|.+++...+..+||
T Consensus 292 ~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV 371 (496)
T 3mje_A 292 VRVTIAACDAADREALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFV 371 (496)
T ss_dssp CEEEEEECCTTCHHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEE
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEE
Confidence 468899999999999998875 479999999986 32211 12234678999999999999998889999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccH
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSN 159 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~ 159 (404)
++||....... .....|+.+|..++.+.+ ..|+.++.|++|.+.+.+........-.+... ....+..
T Consensus 372 ~~SS~a~~~g~------~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~---g~~~l~p 442 (496)
T 3mje_A 372 LFSSGAAVWGS------GGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQ---GVLAMEP 442 (496)
T ss_dssp EEEEHHHHTTC------TTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHT---TEEEECH
T ss_pred EEeChHhcCCC------CCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhc---CCCCCCH
Confidence 99997653221 123679999998887765 47999999999988654332110000000111 1124789
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccc
Q 015570 160 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 204 (404)
Q Consensus 160 ~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~ 204 (404)
+++++++..++..... ..++.. ++|..+...+...
T Consensus 443 e~~~~~l~~~l~~~~~-----~~~v~~-----ldw~~~~~~~~~~ 477 (496)
T 3mje_A 443 EHALGALDQMLENDDT-----AAAITL-----MDWEMFAPAFTAN 477 (496)
T ss_dssp HHHHHHHHHHHHHTCS-----EEEECE-----ECHHHHHHHHTSS
T ss_pred HHHHHHHHHHHcCCCc-----eEEEEE-----ccHHHHHhhhccc
Confidence 9999999999986552 223333 6787777665443
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.58 E-value=7.7e-07 Score=92.44 Aligned_cols=171 Identities=14% Similarity=0.024 Sum_probs=119.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHHHhCC-----C
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAK-----V 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa~~ag-----V 78 (404)
.++.++.+|+.|.+++..+++ .+|+|||+||....... ++...+++|+.++.+|.+++.... .
T Consensus 315 ~~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~ 394 (525)
T 3qp9_A 315 ATATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRP 394 (525)
T ss_dssp CEEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCC
Confidence 358899999999999998876 46999999998643221 122346789999999999998765 7
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG 155 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~ 155 (404)
.+||++||....... .....|+.+|..++.+.+. .|+.++.|++|.+...... .....-.+.. ....
T Consensus 395 ~~iV~~SS~a~~~g~------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~-~~~~~~~~~~---~g~~ 464 (525)
T 3qp9_A 395 PVLVLFSSVAAIWGG------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVT-EGATGERLRR---LGLR 464 (525)
T ss_dssp CEEEEEEEGGGTTCC------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGG-SSHHHHHHHH---TTBC
T ss_pred CEEEEECCHHHcCCC------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcccccccc-chhhHHHHHh---cCCC
Confidence 899999998654321 1246799999999988754 6899999999999322110 1000000111 1123
Q ss_pred cccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 156 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 156 ~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
.+..+++++++..++..+.. ..++.. ++|..+...+.....
T Consensus 465 ~l~pee~a~~l~~~l~~~~~-----~v~v~~-----~dw~~~~~~~~~~~~ 505 (525)
T 3qp9_A 465 PLAPATALTALDTALGHGDT-----AVTIAD-----VDWSSFAPGFTTARP 505 (525)
T ss_dssp CBCHHHHHHHHHHHHHHTCS-----EEEECC-----BCHHHHHHHHHSSSC
T ss_pred CCCHHHHHHHHHHHHhCCCC-----eEEEEe-----CCHHHHHhhccccCC
Confidence 58999999999999986552 223333 778888887766544
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.58 E-value=3.8e-08 Score=91.55 Aligned_cols=145 Identities=12% Similarity=0.002 Sum_probs=95.9
Q ss_pred CCCCEEEEcCcCCCC---CC------CCCCcchhhHHHHHHHHHHHHH----hCCCCEEEEeccCcccCCCCchhhcccc
Q 015570 36 GNASVVICCIGASEK---EV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAILNLF 102 (404)
Q Consensus 36 ~gvDvVI~~ag~~~~---~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI~vSS~gv~~~~~~~~~~~~~ 102 (404)
.++|+|||+||.... .. .++...+++|+.+..++++++. +.+..+||++||....... ...
T Consensus 71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------~~~ 144 (244)
T 1zmo_A 71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL------AYN 144 (244)
T ss_dssp SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC------TTC
T ss_pred CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC------CCc
Confidence 479999999997543 11 1233456789888888877764 5566799999998765432 123
Q ss_pred hHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCC---CccC-cccEEEccC-CccccCcccHHHHHHHHHHHH
Q 015570 103 WGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTD---AYKE-THNITLSQE-DTLFGGQVSNLQVAELLACMA 170 (404)
Q Consensus 103 ~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~---~~~~-~~~i~~~~~-~~~~~~~Is~~DVA~ai~~~l 170 (404)
..|+.+|..++.+.+. .|+.++.|+||++..+.. .... ......... ....+.+.+.+|||++++.++
T Consensus 145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~ 224 (244)
T 1zmo_A 145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLA 224 (244)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence 5799999999888763 589999999999876532 1000 000000000 112234679999999999999
Q ss_pred hCCC-CCCCcEEEEEcC
Q 015570 171 KNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 171 ~~~~-~~~~~i~nI~~~ 186 (404)
.+.. +..++++.+.++
T Consensus 225 s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 225 SRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp TTTTGGGTTCEEEESTT
T ss_pred CccccCccCCEEEeCCC
Confidence 8654 334778877665
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=4.2e-07 Score=85.92 Aligned_cols=165 Identities=10% Similarity=0.017 Sum_probs=109.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHHH----hCCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAAT----IAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa~----~agVk 79 (404)
.++..+.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+++++. +.+ .
T Consensus 55 ~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G 133 (258)
T 4gkb_A 55 PRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-G 133 (258)
T ss_dssp TTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred CCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 57889999999998877654 48999999999763322 1233446778887777766553 334 5
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cccc-----EEE
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHN-----ITL 146 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~-----i~~ 146 (404)
++|++||....... .....|..+|..++.+.+. .|+.+..|.||++..+..... .... +..
T Consensus 134 ~IVnisS~~~~~~~------~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~ 207 (258)
T 4gkb_A 134 AIVNISSKTAVTGQ------GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAE 207 (258)
T ss_dssp EEEEECCTHHHHCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHH
T ss_pred eEEEEeehhhccCC------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHH
Confidence 89999998764321 1236799999999887763 689999999999975432110 0000 000
Q ss_pred ccCCccc-cCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 147 SQEDTLF-GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~-~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
....... ..+...+|||+++++++.+.. +.-|+++.|-++-
T Consensus 208 ~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 208 IAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence 0111112 245689999999999996543 3457888887774
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.50 E-value=9.9e-08 Score=90.16 Aligned_cols=165 Identities=10% Similarity=0.022 Sum_probs=111.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH-----hCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT-----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~-----~ag 77 (404)
.++..+.+|++|.+++.+++ .++|++||+||..... ..+|...+++|+.+...+++++. +.+
T Consensus 58 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~ 137 (255)
T 4g81_D 58 YDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS 137 (255)
T ss_dssp CCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC
Confidence 46889999999998887665 3789999999986432 12344456788888877776552 234
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccE-EEcc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQ 148 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i-~~~~ 148 (404)
-.++|++||....... .....|..+|..+..+.+. .|+.+..|.||++..+..... ....+ ....
T Consensus 138 ~G~IVnisS~~~~~~~------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 211 (255)
T 4g81_D 138 GGKIINIGSLTSQAAR------PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVK 211 (255)
T ss_dssp CEEEEEECCGGGTSBC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHH
T ss_pred CCEEEEEeehhhcCCC------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHH
Confidence 4599999998764322 1236799999999887763 689999999999975422110 00000 0001
Q ss_pred CCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.....+.+...+|||++++.++.+. .+.-|+++.|-++
T Consensus 212 ~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 212 SSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp HHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 1122234568899999999999654 3345778877666
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=5.1e-07 Score=85.49 Aligned_cols=167 Identities=17% Similarity=0.094 Sum_probs=108.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC--------CCCCCcchhhHHHHHHHHHHHH----HhC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAA----TIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~--------~~d~~~~~~vnv~~~~~Ll~Aa----~~a 76 (404)
.....+.+|++|.+++..++ .++|++||++|..... ..+|...+++|+.+...+++++ ++.
T Consensus 50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~ 129 (261)
T 4h15_A 50 PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR 129 (261)
T ss_dssp CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc
Confidence 34457899999998877654 4799999999964321 1233445678888877766654 445
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc------Cc--
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK------ET-- 141 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~------~~-- 141 (404)
+-.++|++||........ .....|+.+|..++.+.+. .|+.+..|.||++..+..... ..
T Consensus 130 ~~G~Iv~isS~~~~~~~~-----~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~ 204 (261)
T 4h15_A 130 GSGVVVHVTSIQRVLPLP-----ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGT 204 (261)
T ss_dssp TCEEEEEECCGGGTSCCT-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEEehhhccCCC-----CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhcc
Confidence 656899999986543211 1235789999999877763 689999999999964321100 00
Q ss_pred -----cc-EEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 142 -----HN-ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 142 -----~~-i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.. +.........+.+...+|||+++++++.+.. +.-|+++.|-++-
T Consensus 205 ~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 205 DLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp CHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred chhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 00 0001112233456789999999999996543 3357788877663
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1.2e-07 Score=90.67 Aligned_cols=147 Identities=9% Similarity=0.023 Sum_probs=95.6
Q ss_pred hCCCCEEEEcCcCCC---CC-----CCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCcccCCCCchhhcccc-h
Q 015570 35 LGNASVVICCIGASE---KE-----VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF-W 103 (404)
Q Consensus 35 L~gvDvVI~~ag~~~---~~-----~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~gv~~~~~~~~~~~~~-~ 103 (404)
+.++|+|||+||... .. ..++...+++|+.+..++++++... .-.+||++||....... ... .
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~------~~~~~ 190 (297)
T 1d7o_A 117 FGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII------PGYGG 190 (297)
T ss_dssp HSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC------TTCTT
T ss_pred cCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCC------CCcch
Confidence 347999999998532 11 1123445788999999999998753 12589999997654321 112 3
Q ss_pred HHHHHHHHHHHHHHH--------CCCCEEEEEcCccCCCCCCccCc-ccE-EEccCCccccCcccHHHHHHHHHHHHhCC
Q 015570 104 GVLLWKRKAEEALIA--------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 104 ~y~~sK~~~E~~l~~--------~gl~~tIlRpg~~~G~~~~~~~~-~~i-~~~~~~~~~~~~Is~~DVA~ai~~~l~~~ 173 (404)
.|+.+|..++.+.+. .|+.++.|+||++..+....... ..+ .........+.+.+.+|||++++.++...
T Consensus 191 ~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~ 270 (297)
T 1d7o_A 191 GMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPL 270 (297)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCcc
Confidence 699999998877651 58999999999998764321100 000 00000112234578999999999998653
Q ss_pred -CCCCCcEEEEEcCC
Q 015570 174 -SLSYCKVVEVIAET 187 (404)
Q Consensus 174 -~~~~~~i~nI~~~~ 187 (404)
.+..++++++.++.
T Consensus 271 ~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 271 ASAITGATIYVDNGL 285 (297)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred ccCCCCCEEEECCCc
Confidence 33357788887773
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.39 E-value=5.1e-07 Score=84.81 Aligned_cols=165 Identities=10% Similarity=0.041 Sum_probs=112.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCC-CCEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK-VNHFI 82 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag-VkrfI 82 (404)
.++..+.+|+.|.+.+..+++ ++|++||+||..... ..+|...+++|+.+...+++++. +.+ -.++|
T Consensus 56 ~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IV 135 (247)
T 4hp8_A 56 GNASALLIDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVV 135 (247)
T ss_dssp CCEEEEECCTTSTTTTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CcEEEEEccCCCHHHHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 468899999999988887764 799999999986432 22345567889888888777643 333 35899
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEccCCccc
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLF 153 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~~~~~~ 153 (404)
++||....... .....|..+|..+..+.+. .|+.+..|.||++..+..... ..............
T Consensus 136 nisS~~~~~g~------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl 209 (247)
T 4hp8_A 136 NIASLLSFQGG------IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPA 209 (247)
T ss_dssp EECCGGGTSCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTT
T ss_pred EEechhhCCCC------CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCC
Confidence 99998764332 1235799999999887763 689999999999965432110 00000111122233
Q ss_pred cCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 154 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
+.+-..+|||.++++++.+.. +.-|+++.|-++
T Consensus 210 gR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 210 GRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp SSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 446688999999999986543 334778877666
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.39 E-value=5.3e-07 Score=85.95 Aligned_cols=166 Identities=11% Similarity=0.029 Sum_probs=111.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++..+.+|++|.+++++++ .++|++||+||..... ..+|...+++|+.+...+++++... +-.+
T Consensus 75 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~ 154 (273)
T 4fgs_A 75 GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSS 154 (273)
T ss_dssp TTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEE
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCe
Confidence 46788999999998877664 4789999999976322 1234455788999999998888653 2247
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Ccc------cEEE
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETH------NITL 146 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~------~i~~ 146 (404)
+|++||....... ..+..|..+|..+..+.+. .|+.+..|.||++..+..... ... .+..
T Consensus 155 IInisS~~~~~~~------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~ 228 (273)
T 4fgs_A 155 VVLTGSTAGSTGT------PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNA 228 (273)
T ss_dssp EEEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHH
T ss_pred EEEEeehhhccCC------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHH
Confidence 9999988654322 1246799999999887763 689999999999865422110 000 0000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.......+.+...+|||++++.++.+.. +.-|+++.|-++.
T Consensus 229 ~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 229 LAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp HHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence 0011223346689999999999996543 3457788776663
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.4e-08 Score=97.53 Aligned_cols=114 Identities=13% Similarity=0.005 Sum_probs=80.9
Q ss_pred cCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CC-EEEEeccCcc-cCCCC-chh-
Q 015570 23 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSSLGT-NKFGF-PAA- 97 (404)
Q Consensus 23 gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-Vk-rfI~vSS~gv-~~~~~-~~~- 97 (404)
+|+.+.+.+..+++++|+|||+||.......+...+++.|+.+++++++++++.+ .+ +||++|+... ..... ...
T Consensus 66 ~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~ 145 (327)
T 1y7t_A 66 AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAP 145 (327)
T ss_dssp EEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred CCeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcC
Confidence 4555556678889999999999998754333455678999999999999999985 65 7887776431 00000 000
Q ss_pred hcccchHHHHHHHHHHHHHH----HCCCCEEEEEcCccCCCCC
Q 015570 98 ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTD 136 (404)
Q Consensus 98 ~~~~~~~y~~sK~~~E~~l~----~~gl~~tIlRpg~~~G~~~ 136 (404)
...+...|+.+|...|++++ ..|++.++||++++||+..
T Consensus 146 ~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 146 GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 11223347888998888765 3599999999999999754
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.38 E-value=1.1e-06 Score=82.55 Aligned_cols=165 Identities=12% Similarity=0.039 Sum_probs=106.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC-------CCC---CcchhhHHHHHHHHHHHHHhC--
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV-------FDI---TGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~-------~d~---~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
.++.++.+|++|.+++.+++ .++|++||++|...... ..+ ...+.+|+.+...+.+++...
T Consensus 58 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~ 137 (256)
T 4fs3_A 58 PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP 137 (256)
T ss_dssp SSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 47889999999998877654 48999999999753211 111 112356666666666666543
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-c-cEEEc
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-H-NITLS 147 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~-~i~~~ 147 (404)
+-.++|++||....... ..+..|+.+|..++.+.+. .|+.+..|.||++..+....... . .....
T Consensus 138 ~~G~IVnisS~~~~~~~------~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~ 211 (256)
T 4fs3_A 138 EGGSIVATTYLGGEFAV------QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEI 211 (256)
T ss_dssp TCEEEEEEECGGGTSCC------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHH
T ss_pred cCCEEEEEeccccccCc------ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHH
Confidence 22489999998764332 2246799999999877763 68999999999986532211100 0 00000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+.+...+|||+++++++.+.. +.-|+++.|-++
T Consensus 212 ~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 212 KERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp HHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 111223346789999999999996543 335778877666
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.32 E-value=7e-07 Score=94.47 Aligned_cols=150 Identities=11% Similarity=0.036 Sum_probs=100.5
Q ss_pred EEcCCCCHhhHHHHhC-------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCCEEEE
Q 015570 21 VECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIM 83 (404)
Q Consensus 21 V~gDl~d~~~l~~aL~-------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVkrfI~ 83 (404)
+.+|+.|.+++.++++ ++|+|||+||...... .++...+++|+.+..++++++ ++.+..+||+
T Consensus 79 ~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~ 158 (613)
T 3oml_A 79 AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIM 158 (613)
T ss_dssp EEECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3479999888777664 6899999999864321 223445688999999988877 5566679999
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCc
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ 156 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~ 156 (404)
+||....... .....|+.+|..++.+.+. .|+.+..|.||.+....... ........
T Consensus 159 isS~a~~~~~------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~----------~~~~~~~~ 222 (613)
T 3oml_A 159 TSSNSGIYGN------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGI----------LPDILFNE 222 (613)
T ss_dssp ECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCC----------CCHHHHTT
T ss_pred ECCHHHcCCC------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhc----------cchhhhhc
Confidence 9997653221 1246799999999887763 58999999999753211100 00112234
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 157 VSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 157 Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
+..+|||++++.++.+..+..|+++++.++
T Consensus 223 ~~pedvA~~v~~L~s~~~~~tG~~i~vdGG 252 (613)
T 3oml_A 223 LKPKLIAPVVAYLCHESCEDNGSYIESAAG 252 (613)
T ss_dssp CCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred CCHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence 688999999999997765456788888765
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.6e-07 Score=89.38 Aligned_cols=147 Identities=8% Similarity=0.021 Sum_probs=80.0
Q ss_pred hCCCCEEEEcCcCCC---CC-----CCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCcccCCCCchhhcccc-h
Q 015570 35 LGNASVVICCIGASE---KE-----VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF-W 103 (404)
Q Consensus 35 L~gvDvVI~~ag~~~---~~-----~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~gv~~~~~~~~~~~~~-~ 103 (404)
+.++|+|||+||... .. ..++...+++|+.+..++++++... .-.+||++||....... ... .
T Consensus 131 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------~~~~~ 204 (319)
T 2ptg_A 131 VGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI------PGYGG 204 (319)
T ss_dssp HSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------
T ss_pred cCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc------Cccch
Confidence 348999999998642 11 1123345688999999999988754 11589999998654321 112 3
Q ss_pred HHHHHHHHHHHHHH-------H-CCCCEEEEEcCccCCCCCCccCc---ccE-----EEccCCccccCcccHHHHHHHHH
Q 015570 104 GVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKET---HNI-----TLSQEDTLFGGQVSNLQVAELLA 167 (404)
Q Consensus 104 ~y~~sK~~~E~~l~-------~-~gl~~tIlRpg~~~G~~~~~~~~---~~i-----~~~~~~~~~~~~Is~~DVA~ai~ 167 (404)
.|+.+|..++.+.+ . .|+.+..|+||++..+....... ..+ .........+.+...+|||++++
T Consensus 205 ~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~ 284 (319)
T 2ptg_A 205 GMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAAL 284 (319)
T ss_dssp --------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHH
Confidence 68999988877664 1 58999999999997643211000 000 00001112234678999999999
Q ss_pred HHHhCC-CCCCCcEEEEEcCC
Q 015570 168 CMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 168 ~~l~~~-~~~~~~i~nI~~~~ 187 (404)
+++.+. .+..++++.+.++.
T Consensus 285 ~L~s~~~~~itG~~i~vdGG~ 305 (319)
T 2ptg_A 285 FLLSPLARAVTGATLYVDNGL 305 (319)
T ss_dssp HHTSGGGTTCCSCEEEESTTC
T ss_pred HHhCcccCCccCCEEEECCCc
Confidence 999753 33457788877774
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.12 E-value=2.9e-06 Score=82.57 Aligned_cols=166 Identities=9% Similarity=0.087 Sum_probs=105.9
Q ss_pred CCeEEEEcCCCCH--h------------------hHHHHh-------CCCCEEEEcCcCCC--C-C-----CCCCCcchh
Q 015570 16 EMLELVECDLEKR--V------------------QIEPAL-------GNASVVICCIGASE--K-E-----VFDITGPYR 60 (404)
Q Consensus 16 ~gveiV~gDl~d~--~------------------~l~~aL-------~gvDvVI~~ag~~~--~-~-----~~d~~~~~~ 60 (404)
..+.++.+|+.+. + ++.+++ .++|++||+||... . . ..++...++
T Consensus 65 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~ 144 (329)
T 3lt0_A 65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALS 144 (329)
T ss_dssp CEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred cccccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHH
Confidence 4578899999877 6 555443 47899999999631 1 1 112344578
Q ss_pred hHHHHHHHHHHHHHhCC--CCEEEEeccCcccCCCCchhhcccch-HHHHHHHHHHHHHH-------H-CCCCEEEEEcC
Q 015570 61 IDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPAAILNLFW-GVLLWKRKAEEALI-------A-SGLPYTIVRPG 129 (404)
Q Consensus 61 vnv~~~~~Ll~Aa~~ag--VkrfI~vSS~gv~~~~~~~~~~~~~~-~y~~sK~~~E~~l~-------~-~gl~~tIlRpg 129 (404)
+|+.+...+++++...= -.+||++||....... .... .|+.+|..++.+.+ . .|+.+..|.||
T Consensus 145 vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG 218 (329)
T 3lt0_A 145 KSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAG 218 (329)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred HHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCC------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecc
Confidence 89999999998876531 1489999998654322 1122 69999998887664 3 58999999999
Q ss_pred ccCCCCCCccCc-----------------ccE----------------------------EEccCCccccCcccHHHHHH
Q 015570 130 GMERPTDAYKET-----------------HNI----------------------------TLSQEDTLFGGQVSNLQVAE 164 (404)
Q Consensus 130 ~~~G~~~~~~~~-----------------~~i----------------------------~~~~~~~~~~~~Is~~DVA~ 164 (404)
++..+....... +.+ .........+.+...+|||+
T Consensus 219 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~ 298 (329)
T 3lt0_A 219 PLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGS 298 (329)
T ss_dssp CCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHH
T ss_pred eeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHH
Confidence 986431110000 000 00000112234678899999
Q ss_pred HHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 165 LLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 165 ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
+++.++... .+.-|+++.+-++.
T Consensus 299 ~v~fL~s~~a~~itG~~i~vdGG~ 322 (329)
T 3lt0_A 299 VASFLLSRESRAITGQTIYVDNGL 322 (329)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCchhccccCcEEEEcCCe
Confidence 999999654 33457788777764
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=4.8e-07 Score=87.46 Aligned_cols=147 Identities=10% Similarity=-0.000 Sum_probs=92.4
Q ss_pred CCCCEEEEcCcCCC---CC-----CCCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCcccCCCCchhhcccchHH
Q 015570 36 GNASVVICCIGASE---KE-----VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFWGV 105 (404)
Q Consensus 36 ~gvDvVI~~ag~~~---~~-----~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~gv~~~~~~~~~~~~~~~y 105 (404)
.++|++||+||... .. ..++...+++|+.+..++++++... .-.+||++||........ .....|
T Consensus 119 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~-----~~~~~Y 193 (315)
T 2o2s_A 119 GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP-----GYGGGM 193 (315)
T ss_dssp CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT-----TCCTTH
T ss_pred CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccCC-----CccHHH
Confidence 47999999999642 11 1123345688999999999988653 115899999986643211 111369
Q ss_pred HHHHHHHHHHHH-------H-CCCCEEEEEcCccCCCCCCccC-cc--cE--EE---ccCCccccCcccHHHHHHHHHHH
Q 015570 106 LLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKE-TH--NI--TL---SQEDTLFGGQVSNLQVAELLACM 169 (404)
Q Consensus 106 ~~sK~~~E~~l~-------~-~gl~~tIlRpg~~~G~~~~~~~-~~--~i--~~---~~~~~~~~~~Is~~DVA~ai~~~ 169 (404)
+.+|..++.+.+ . .|+.+..|+||++..+...... .. .+ .. .......+.+...+|||++++++
T Consensus 194 ~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 273 (315)
T 2o2s_A 194 SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFL 273 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Confidence 999998887764 1 5899999999998653211000 00 00 00 00001223457899999999999
Q ss_pred HhCCC-CCCCcEEEEEcCC
Q 015570 170 AKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 170 l~~~~-~~~~~i~nI~~~~ 187 (404)
+.... +..|+++.+.++.
T Consensus 274 ~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 274 LSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp TSGGGTTCCSCEEEESTTG
T ss_pred hCchhccCcCCEEEECCCe
Confidence 97533 3347777776663
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=6e-06 Score=95.77 Aligned_cols=176 Identities=11% Similarity=-0.077 Sum_probs=110.6
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------------CCCEEEEcCcCCCCC-C--------CCCCcchhhHHHHHHHHHHHH
Q 015570 16 EMLELVECDLEKRVQIEPALG-------------NASVVICCIGASEKE-V--------FDITGPYRIDFQATKNLVDAA 73 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------------gvDvVI~~ag~~~~~-~--------~d~~~~~~vnv~~~~~Ll~Aa 73 (404)
.++.++.+|+.|.+++..+++ ++|+|||+||..... . .++...+.+|+.+..++++++
T Consensus 730 ~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~ 809 (1887)
T 2uv8_A 730 STLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQ 809 (1887)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999988876652 589999999976432 1 112345688999999999987
Q ss_pred HhCC------CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHH-HH---H---CCCCEEEEEcCccCC-CCCCcc
Q 015570 74 TIAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEA-LI---A---SGLPYTIVRPGGMER-PTDAYK 139 (404)
Q Consensus 74 ~~ag------VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~-l~---~---~gl~~tIlRpg~~~G-~~~~~~ 139 (404)
+... -.+||++||...... ....|+.+|..++.+ .+ . ..+.++.|+||++.+ +.....
T Consensus 810 ~~lp~m~~~~~G~IVnISS~ag~~g--------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~ 881 (1887)
T 2uv8_A 810 KSARGIETRPAQVILPMSPNHGTFG--------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN 881 (1887)
T ss_dssp HHTTTCCSCCEEEEEEECSCTTCSS--------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C
T ss_pred HhhhhhhhCCCCEEEEEcChHhccC--------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc
Confidence 4332 248999999865432 235699999999887 22 1 228889999999973 211100
Q ss_pred CcccEEEccCCccccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEE-cCCCCCCccHHHHHHHcc
Q 015570 140 ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVI-AETTAPLTPMEELLAKIP 202 (404)
Q Consensus 140 ~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~-~~~~~~~~si~ell~~i~ 202 (404)
....-.+. . ....+.+.+|||++++.++... .+..++.+.+. ++......++.+++..+.
T Consensus 882 ~~~~~~~~--~-~plr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~lr 944 (1887)
T 2uv8_A 882 NIIAEGIE--K-MGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLR 944 (1887)
T ss_dssp CTTHHHHH--T-TSCCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHHH
T ss_pred hhHHHHHH--h-cCCCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHHH
Confidence 00000000 0 1113458999999999988654 11235666663 232223356777766553
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=1.5e-05 Score=92.30 Aligned_cols=176 Identities=11% Similarity=-0.056 Sum_probs=110.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-----------CCCEEEEcCcCCCCC--CCC-------CCcchhhHHHHHHHHHHHHHh
Q 015570 16 EMLELVECDLEKRVQIEPALG-----------NASVVICCIGASEKE--VFD-------ITGPYRIDFQATKNLVDAATI 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-----------gvDvVI~~ag~~~~~--~~d-------~~~~~~vnv~~~~~Ll~Aa~~ 75 (404)
.++.++.+|+.|.+++..+++ .+|+|||+||..... ..+ +...+.+|+.+..+++++++.
T Consensus 707 ~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~ 786 (1878)
T 2uv9_A 707 SQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKK 786 (1878)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358899999999988887652 589999999976432 111 234568899998888876432
Q ss_pred ---C---CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccC-CCCCCccCc
Q 015570 76 ---A---KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKET 141 (404)
Q Consensus 76 ---a---gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~-G~~~~~~~~ 141 (404)
. +..+||++||....... ...|+.+|..++.+.+. .++.++.|.||++. .+.... .
T Consensus 787 lp~M~~~~~G~IVnISS~ag~~gg--------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~--~ 856 (1878)
T 2uv9_A 787 ERGYETRPAQVILPLSPNHGTFGN--------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA--N 856 (1878)
T ss_dssp HHTCCSCCEEECCEECSCSSSSSC--------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH--H
T ss_pred hHHHHhCCCCEEEEEcchhhccCC--------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc--c
Confidence 1 22489999997653321 24699999999887531 23889999999987 332110 0
Q ss_pred ccEEEccCCccccCcccHHHHHHHHHHHHhCCC--CCCCcEEEEE-cCCCCCCccHHHHHHHcc
Q 015570 142 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS--LSYCKVVEVI-AETTAPLTPMEELLAKIP 202 (404)
Q Consensus 142 ~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~--~~~~~i~nI~-~~~~~~~~si~ell~~i~ 202 (404)
....-.... ......+.+|||++++.++.... +..++.+.+. ++......++.++++.+.
T Consensus 857 ~~~~~~~~~-~plr~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~lr 919 (1878)
T 2uv9_A 857 NLVAEGVEK-LGVRTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKLR 919 (1878)
T ss_dssp HHTHHHHHT-TTCCCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHHH
T ss_pred hhhHHHHHh-cCCCCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHHH
Confidence 000000000 11134589999999999886432 2235666663 232222366777776553
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.70 E-value=6.5e-06 Score=93.09 Aligned_cols=175 Identities=12% Similarity=-0.066 Sum_probs=107.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-------------CCCEEEEcCcCCCCC-C-C-------CCCcchhhHHHHHHHHHHHH
Q 015570 16 EMLELVECDLEKRVQIEPALG-------------NASVVICCIGASEKE-V-F-------DITGPYRIDFQATKNLVDAA 73 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-------------gvDvVI~~ag~~~~~-~-~-------d~~~~~~vnv~~~~~Ll~Aa 73 (404)
.++.++.+|+.|.+++..+++ ++|+|||+||..... . . ++...+.+|+.+..++++++
T Consensus 531 a~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa 610 (1688)
T 2pff_A 531 STLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQ 610 (1688)
T ss_dssp CEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999988877652 589999999976432 1 1 12345688999999998887
Q ss_pred HhC------CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCC-CCCCcc
Q 015570 74 TIA------KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMER-PTDAYK 139 (404)
Q Consensus 74 ~~a------gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G-~~~~~~ 139 (404)
+.. +-.+||++||...... ....|+.+|..++.++.. .++.++.|.||++.+ .....
T Consensus 611 ~~lp~M~krggGrIVnISSiAG~~G--------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~- 681 (1688)
T 2pff_A 611 KSARGIETRPAQVILPMSPNHGTFG--------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA- 681 (1688)
T ss_dssp HHHHTCTTSCEEECCCCCSCTTTSS--------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT-
T ss_pred HhChHHHhCCCCEEEEEEChHhccC--------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC-
Confidence 321 2248999999765332 235699999999998422 226677889999874 21110
Q ss_pred CcccEEEccCCccccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEE-cCCCCCCccHHHHHHHc
Q 015570 140 ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVI-AETTAPLTPMEELLAKI 201 (404)
Q Consensus 140 ~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~-~~~~~~~~si~ell~~i 201 (404)
..... ...........+.+|||++++.++... .+..++.+.+. ++......++.+++..+
T Consensus 682 -~e~~~-~~l~~iplR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~l 744 (1688)
T 2pff_A 682 -NNIIA-EGIEKMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL 744 (1688)
T ss_dssp -TTTCS-TTTSSSSCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHHH
T ss_pred -chHHH-HHHHhCCCCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHHH
Confidence 00000 000011113457899999999998765 11125555542 22222234566655443
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.45 E-value=5.1e-05 Score=82.54 Aligned_cols=148 Identities=15% Similarity=0.099 Sum_probs=100.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhCCCCEEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKVNHFIM 83 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~ 83 (404)
.++.++.||++|.+++.++++ .+|+|||+||...... .++...+++|+.++.+|.+++.. .. +||+
T Consensus 584 ~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~ 661 (795)
T 3slk_A 584 AEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVL 661 (795)
T ss_dssp CEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEE
T ss_pred CcEEEEEeecCCHHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEE
Confidence 358899999999999998875 4699999999864321 12333467789999999998833 34 8999
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCccCCCCCCcc--CcccEEEccCCccccCccc
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVS 158 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~~~~~~~~~Is 158 (404)
+||....... .....|+.+|...+.+.+ ..|++++.|.+|.+...+.... ....-.+.. .....+.
T Consensus 662 ~SS~ag~~g~------~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~---~g~~~l~ 732 (795)
T 3slk_A 662 FSSVSGVLGS------GGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLAR---SGLLPIS 732 (795)
T ss_dssp EEETHHHHTC------SSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHH---TTBCCCC
T ss_pred EccHHhcCCC------CCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHh---cCCCCCC
Confidence 9998653221 123579999987766554 4799999999999875432110 000000111 1123578
Q ss_pred HHHHHHHHHHHHhCCC
Q 015570 159 NLQVAELLACMAKNRS 174 (404)
Q Consensus 159 ~~DVA~ai~~~l~~~~ 174 (404)
.+++.+++..++..+.
T Consensus 733 ~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 733 TEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 8999999988887655
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00027 Score=74.43 Aligned_cols=154 Identities=14% Similarity=0.035 Sum_probs=97.3
Q ss_pred CeEEEEcCC-CCHhhH----HHHhCCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCCEE
Q 015570 17 MLELVECDL-EKRVQI----EPALGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHF 81 (404)
Q Consensus 17 gveiV~gDl-~d~~~l----~~aL~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVkrf 81 (404)
++..+.+|+ .+.+.+ .+.+.++|++||+||...... .+|...+++|+.+..++.+++ ++.+-.+|
T Consensus 370 ~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~I 449 (604)
T 2et6_A 370 EAWPDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRI 449 (604)
T ss_dssp EEEEECCCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred eEEEEEcChHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 355666777 554332 233568999999999763221 123445678888888777665 34454699
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcccc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 154 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~ 154 (404)
|++||....... .....|+.+|..+..+.+. .|+.+..|.||. ..+.. . .. .. .. ..
T Consensus 450 VnisS~ag~~~~------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~--~---~~-~~--~~-~~ 513 (604)
T 2et6_A 450 INITSTSGIYGN------FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMT--L---SI-MR--EQ-DK 513 (604)
T ss_dssp EEECCHHHHSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------C
T ss_pred EEECChhhccCC------CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccc--c---cc-Cc--hh-hc
Confidence 999997553221 1235799999998877652 689999999994 21111 0 00 00 00 11
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 155 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 155 ~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
.....+|||+++++++.......++++.+.++
T Consensus 514 ~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG 545 (604)
T 2et6_A 514 NLYHADQVAPLLVYLGTDDVPVTGETFEIGGG 545 (604)
T ss_dssp CSSCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred cCCCHHHHHHHHHHHhCCccCCCCcEEEECCC
Confidence 24588999999999886544345778887766
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00026 Score=74.65 Aligned_cols=148 Identities=14% Similarity=0.023 Sum_probs=95.3
Q ss_pred cCCCCHhhHHH-------HhCCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCCCEEEEec
Q 015570 23 CDLEKRVQIEP-------ALGNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVS 85 (404)
Q Consensus 23 gDl~d~~~l~~-------aL~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agVkrfI~vS 85 (404)
+|+.|.+++.+ .+.++|++||+||..... ..+|...+++|+.+..++++++. +.+-.+||++|
T Consensus 70 ~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnis 149 (604)
T 2et6_A 70 ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTS 149 (604)
T ss_dssp EECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 57666644332 345899999999975322 12244457889888888777653 44446999999
Q ss_pred cCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCccc
Q 015570 86 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS 158 (404)
Q Consensus 86 S~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is 158 (404)
|....... .....|+.+|..+..+.+. .|+.+..|.|+. .. .. .... . .........
T Consensus 150 S~ag~~~~------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T--~m---~~~~---~-~~~~~~~~~ 213 (604)
T 2et6_A 150 SPAGLYGN------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-RS--RM---TESI---M-PPPMLEKLG 213 (604)
T ss_dssp CHHHHHCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CC--HH---HHTT---S-CHHHHTTCS
T ss_pred CHHHcCCC------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-cC--cc---cccc---C-ChhhhccCC
Confidence 97543221 1235799999998877752 689999999973 11 10 0000 0 000112368
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 159 NLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 159 ~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
.+|||.+++.++....+..++++.+.++
T Consensus 214 pe~vA~~v~~L~s~~~~itG~~~~vdgG 241 (604)
T 2et6_A 214 PEKVAPLVLYLSSAENELTGQFFEVAAG 241 (604)
T ss_dssp HHHHHHHHHHHTSSSCCCCSCEEEEETT
T ss_pred HHHHHHHHHHHhCCcccCCCCEEEECCC
Confidence 9999999999997765445778887765
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=3.8e-05 Score=76.68 Aligned_cols=151 Identities=12% Similarity=0.053 Sum_probs=88.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCC--------------CCC----------------------
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASE--------------KEV---------------------- 52 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~--------------~~~---------------------- 52 (404)
..+..+.+|++|.+++.+++ .++|++||+||... ...
T Consensus 109 ~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~ 188 (405)
T 3zu3_A 109 LYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQ 188 (405)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEEC
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCC
Confidence 35788999999998877654 47899999998731 000
Q ss_pred ----CCCCcchhhHHHHHH-HHHHHHHhCC----CCEEEEeccCcccCCCCchhhcccc--hHHHHHHHHHHHHHHH---
Q 015570 53 ----FDITGPYRIDFQATK-NLVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALIA--- 118 (404)
Q Consensus 53 ----~d~~~~~~vnv~~~~-~Ll~Aa~~ag----VkrfI~vSS~gv~~~~~~~~~~~~~--~~y~~sK~~~E~~l~~--- 118 (404)
.+|...+++|..+.. .+++++...+ -.++|.+||.+..... ..+ ..|+.+|..++.+.+.
T Consensus 189 ~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~------p~~~~~aY~AaKaal~~ltrsLA~ 262 (405)
T 3zu3_A 189 PATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH------DIYWNGSIGAAKKDLDQKVLAIRE 262 (405)
T ss_dssp CCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT------TTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC------CCccchHHHHHHHHHHHHHHHHHH
Confidence 011122334433333 4455543221 1479999998753221 112 5799999999887763
Q ss_pred ----C-CCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhC
Q 015570 119 ----S-GLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 172 (404)
Q Consensus 119 ----~-gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~ 172 (404)
. |+.+..|.||.+..+..................+..+-..+|+++.+++++.+
T Consensus 263 Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 263 SLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp HHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 6 89999999999864311100000000000000122233557899999998876
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00016 Score=72.72 Aligned_cols=152 Identities=12% Similarity=0.044 Sum_probs=87.9
Q ss_pred CeEEEEcCCCCHhhHHHH-------h-CCCCEEEEcCcCC-------------CCCCC----------------------
Q 015570 17 MLELVECDLEKRVQIEPA-------L-GNASVVICCIGAS-------------EKEVF---------------------- 53 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~a-------L-~gvDvVI~~ag~~-------------~~~~~---------------------- 53 (404)
.+..+.+|++|.+++.++ + .++|++||+||.. .....
T Consensus 124 ~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~ 203 (422)
T 3s8m_A 124 YSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIE 203 (422)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEEC
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccC
Confidence 577899999998776644 4 5789999999862 00000
Q ss_pred --C---CCcchhhHHHHHH-HHHHHHHhCCC----CEEEEeccCcccCCCCchhhcccc--hHHHHHHHHHHHHHHH---
Q 015570 54 --D---ITGPYRIDFQATK-NLVDAATIAKV----NHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALIA--- 118 (404)
Q Consensus 54 --d---~~~~~~vnv~~~~-~Ll~Aa~~agV----krfI~vSS~gv~~~~~~~~~~~~~--~~y~~sK~~~E~~l~~--- 118 (404)
+ |...+++|..+.. .+++++...+. .++|.+||.+.... ...+ ..|+.+|..++.+.+.
T Consensus 204 ~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~------~p~~~~~aY~ASKaAl~~lTrsLA~ 277 (422)
T 3s8m_A 204 PASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEIT------WPIYWHGALGKAKVDLDRTAQRLNA 277 (422)
T ss_dssp CCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG------HHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc------CCCccchHHHHHHHHHHHHHHHHHH
Confidence 0 1111222222222 45555543321 47999999865321 1122 5799999999887763
Q ss_pred ----CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 119 ----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 119 ----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
.|+.+..|.||.+..+..................++.+-..+|||++++.++.+.-
T Consensus 278 Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l 337 (422)
T 3s8m_A 278 RLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL 337 (422)
T ss_dssp HHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred HhCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh
Confidence 68999999999997543221100000000000011223345899999999887643
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0031 Score=63.41 Aligned_cols=152 Identities=9% Similarity=0.040 Sum_probs=85.5
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCC-------------CCCC----------------------
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASE-------------KEVF---------------------- 53 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~-------------~~~~---------------------- 53 (404)
.++..+.+|++|.+++.+++ .++|++||+||... ....
T Consensus 123 ~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~ 202 (418)
T 4eue_A 123 LVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVS 202 (418)
T ss_dssp CCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccccccccc
Confidence 35789999999998877654 36899999998730 0000
Q ss_pred --C---CCcchhhHHHHHH-HHHHHHHhCCC----CEEEEeccCcccCCCCchhhcccc--hHHHHHHHHHHHHHH----
Q 015570 54 --D---ITGPYRIDFQATK-NLVDAATIAKV----NHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI---- 117 (404)
Q Consensus 54 --d---~~~~~~vnv~~~~-~Ll~Aa~~agV----krfI~vSS~gv~~~~~~~~~~~~~--~~y~~sK~~~E~~l~---- 117 (404)
+ +...+++|..+.. .+++++...+. .++|.+||.+..... ..+ ..|+.+|..++.+.+
T Consensus 203 ~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~------p~~~~~aY~ASKaAL~~ltrsLA~ 276 (418)
T 4eue_A 203 SASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY------KIYREGTIGIAKKDLEDKAKLINE 276 (418)
T ss_dssp BCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT------TTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC------CccccHHHHHHHHHHHHHHHHHHH
Confidence 0 0011122222222 44555544322 378999987653221 123 579999998887765
Q ss_pred ---H-CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCC
Q 015570 118 ---A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 118 ---~-~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~ 173 (404)
. .|+.+.+|.||.+..+..................+...-..+|+++.+.+++.+.
T Consensus 277 ELa~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~ 336 (418)
T 4eue_A 277 KLNRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEK 336 (418)
T ss_dssp HHHHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred HhCCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhcc
Confidence 3 5899999999998643111000000000000001111234578888888888663
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.005 Score=49.18 Aligned_cols=53 Identities=21% Similarity=0.152 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEE
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 83 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~ 83 (404)
..+++++.+|+.+.+.+.+++.++|+||||++.. ...++++++.+.|+++|.+
T Consensus 47 ~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~----------------~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 47 RMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF----------------LTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp TTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG----------------GHHHHHHHHHHTTCEEECC
T ss_pred hCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch----------------hhHHHHHHHHHhCCCEEEe
Confidence 3578899999999999999999999999999642 2478899999999966653
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.018 Score=69.89 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=79.0
Q ss_pred CeEEEEcCCCCHhhHHHHh------CCCCEEEEcCcCCCC------CCCCCCcchhhHHHHHHHHHHHHHhC--CCCEEE
Q 015570 17 MLELVECDLEKRVQIEPAL------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFI 82 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL------~gvDvVI~~ag~~~~------~~~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI 82 (404)
++.++.+|+.|.+++.+++ ..+|+|||+||.... ...++...+++|+.++.+|.+++... ...+||
T Consensus 1938 ~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV 2017 (2512)
T 2vz8_A 1938 QVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFV 2017 (2512)
T ss_dssp EEEEECCCSSSHHHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEE
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEE
Confidence 5778899999998887665 368999999997532 23456667889999999998877653 336999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCccCC
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMER 133 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~~G 133 (404)
++||....... .....|+.+|..++.+.+ ..|++.+.+..|.+-+
T Consensus 2018 ~iSS~ag~~g~------~g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2018 IFSSVSCGRGN------AGQANYGFANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp EECCHHHHTTC------TTCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred EecchhhcCCC------CCcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence 99997653221 123579999999998886 4799988888887643
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0089 Score=57.94 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=50.0
Q ss_pred HhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 28 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 28 ~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
..++..+++|+|+|||++|..........++...|+.+++++++++++.+.+.+|+++|.-+
T Consensus 67 t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 67 QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred CCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 45677889999999999997654444456678899999999999999988887888877533
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.005 Score=59.30 Aligned_cols=57 Identities=14% Similarity=0.061 Sum_probs=45.8
Q ss_pred HHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCc
Q 015570 31 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 88 (404)
Q Consensus 31 l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~g 88 (404)
+..+|+|+|+|||++|.......+..++...|+.+++++++++++.+ +.+|+++|--
T Consensus 68 l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNP 124 (313)
T 1hye_A 68 NLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNP 124 (313)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSS
T ss_pred hHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCc
Confidence 56679999999999997654333334567899999999999999998 8888888753
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0053 Score=59.58 Aligned_cols=63 Identities=11% Similarity=0.048 Sum_probs=48.4
Q ss_pred CCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CC-EEEEecc
Q 015570 24 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSS 86 (404)
Q Consensus 24 Dl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-Vk-rfI~vSS 86 (404)
|+....++..+|+|+|+|||++|.......+..++...|+..++++++++++.+ .+ +||++|.
T Consensus 70 ~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 70 GMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp EEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 333335677889999999999997654333444567899999999999999984 66 8898885
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=94.95 E-value=0.024 Score=54.22 Aligned_cols=57 Identities=7% Similarity=-0.019 Sum_probs=44.8
Q ss_pred HHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 33 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 33 ~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
.+++++|+|||++|..........++...|+..++++++++++.+.+.+|+++|--+
T Consensus 66 ~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 66 EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 468899999999997654322334567899999999999999998888888877533
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=93.97 E-value=0.082 Score=64.79 Aligned_cols=179 Identities=13% Similarity=0.058 Sum_probs=99.6
Q ss_pred CCeEEEEcCCCCHhhHHHHh-----------CCCCEEEEcCcCC----C-------CCCCCCCcc----hhhHHHHHHHH
Q 015570 16 EMLELVECDLEKRVQIEPAL-----------GNASVVICCIGAS----E-------KEVFDITGP----YRIDFQATKNL 69 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-----------~gvDvVI~~ag~~----~-------~~~~d~~~~----~~vnv~~~~~L 69 (404)
.++.++.+|++|.+++..++ .++|++||+||.. . ....++... +++|+.+...+
T Consensus 2191 ~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l 2270 (3089)
T 3zen_D 2191 ATLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRL 2270 (3089)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHH
T ss_pred CeEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778999999998877653 3589999999971 0 012234333 56777777776
Q ss_pred HHHHH----hCCCC---EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH--------CCCCEEEEEcCccCCC
Q 015570 70 VDAAT----IAKVN---HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA--------SGLPYTIVRPGGMERP 134 (404)
Q Consensus 70 l~Aa~----~agVk---rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~--------~gl~~tIlRpg~~~G~ 134 (404)
++++. +.+.. .+|...+....... ....|+.+|..++.+.+. .++.++.+.||++.+.
T Consensus 2271 ~~~~~~~m~~~~~g~~~~ii~~~ss~~g~~g-------~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT 2343 (3089)
T 3zen_D 2271 ISGLSKIGAERDIASRLHVVLPGSPNRGMFG-------GDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGT 2343 (3089)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEECSSTTSCS-------SCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECS
T ss_pred HHHHHHHHHHcCCCceeEEEEECCcccccCC-------CchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCC
Confidence 66554 33321 22222221111111 123599999988877652 2466788899988632
Q ss_pred CCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCCC--CCCc--EEEEEcCCCCCCccHHHHHHHccc
Q 015570 135 TDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL--SYCK--VVEVIAETTAPLTPMEELLAKIPS 203 (404)
Q Consensus 135 ~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~--~~~~--i~nI~~~~~~~~~si~ell~~i~~ 203 (404)
..... .....-... .........+|||.+++.++..... ..+. .+++.++-.....++.++++++.+
T Consensus 2344 ~l~~~-~~~~~~~~~-~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2344 GLMGQ-NDAIVSAVE-EAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp TTTTT-TTTTHHHHG-GGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred ccccc-chhHHHHHH-hcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 11100 000000000 0111234889999999998854321 1122 334445543235789999987654
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=92.79 E-value=0.16 Score=49.54 Aligned_cols=54 Identities=19% Similarity=0.137 Sum_probs=44.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 86 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS 86 (404)
..+..+.+|+.|.+.+.++++++|+||+|++... ...++++|.++|+ |+|-+|.
T Consensus 56 ~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~----------------~~~v~~~~~~~g~-~yvD~s~ 109 (365)
T 3abi_A 56 EFATPLKVDASNFDKLVEVMKEFELVIGALPGFL----------------GFKSIKAAIKSKV-DMVDVSF 109 (365)
T ss_dssp TTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGG----------------HHHHHHHHHHHTC-EEEECCC
T ss_pred ccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcc----------------cchHHHHHHhcCc-ceEeeec
Confidence 5677889999999999999999999999998631 3578889999987 7776663
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=92.53 E-value=0.22 Score=48.26 Aligned_cols=56 Identities=14% Similarity=0.077 Sum_probs=44.8
Q ss_pred HHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCC--EEEEecc
Q 015570 31 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN--HFIMVSS 86 (404)
Q Consensus 31 l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVk--rfI~vSS 86 (404)
...+++++|+||+++|.......+..+.++.|...++++++++++.+.+ +||.+|-
T Consensus 73 ~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 73 EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 4567889999999999765544456677899999999999999998765 5776664
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=91.71 E-value=0.56 Score=38.13 Aligned_cols=58 Identities=16% Similarity=0.092 Sum_probs=42.6
Q ss_pred CCeEEEEcCCCCHhhHHHH-hCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccC
Q 015570 16 EMLELVECDLEKRVQIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 87 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a-L~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~ 87 (404)
.+..++.+|..+.+.+.++ +.++|+||+|++.. ......+++.+++.+++++|..++.
T Consensus 48 ~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 48 YATHAVIANATEENELLSLGIRNFEYVIVAIGAN--------------IQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp TCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC--------------HHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred hCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc--------------hHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3567889999998888876 78999999999742 1122346777888888877765543
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=89.71 E-value=0.63 Score=44.52 Aligned_cols=56 Identities=16% Similarity=0.183 Sum_probs=43.3
Q ss_pred hHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 015570 30 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 85 (404)
Q Consensus 30 ~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVk-rfI~vS 85 (404)
++..+++++|+||+++|.......+..+....|....+.+++.+.+..-+ +||++|
T Consensus 61 d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s 117 (314)
T 1mld_A 61 QLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (314)
T ss_dssp GHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 56678999999999999865443444566788999999999999886544 677654
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=88.85 E-value=0.58 Score=40.39 Aligned_cols=95 Identities=8% Similarity=0.011 Sum_probs=55.9
Q ss_pred CCeEEEEcCCCCHhhHHHH--hCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCC-CCEEEEeccCcccCC
Q 015570 16 EMLELVECDLEKRVQIEPA--LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKF 92 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a--L~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~ag-VkrfI~vSS~gv~~~ 92 (404)
.+++++.+|..+.+.+.++ +.++|+||.|.+. ......++..+++.+ ..++|... ......
T Consensus 82 ~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~---------------~~~~~~~~~~~~~~~~~~~ii~~~-~~~~~~ 145 (183)
T 3c85_A 82 EGRNVISGDATDPDFWERILDTGHVKLVLLAMPH---------------HQGNQTALEQLQRRNYKGQIAAIA-EYPDQL 145 (183)
T ss_dssp TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS---------------HHHHHHHHHHHHHTTCCSEEEEEE-SSHHHH
T ss_pred CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC---------------hHHHHHHHHHHHHHCCCCEEEEEE-CCHHHH
Confidence 4678899999999888887 7899999999863 123345566777766 44555432 211100
Q ss_pred C-Cch-hhcc-cchHHHHHHHHHHHHHHHCCCCEEEE
Q 015570 93 G-FPA-AILN-LFWGVLLWKRKAEEALIASGLPYTIV 126 (404)
Q Consensus 93 ~-~~~-~~~~-~~~~y~~sK~~~E~~l~~~gl~~tIl 126 (404)
. ... .... ........+..++.++...+++|+++
T Consensus 146 ~~l~~~G~~~vi~p~~~~a~~l~~~~~~~~~~~~~~~ 182 (183)
T 3c85_A 146 EGLLESGVDAAFNIYSEAGSGFARHVCKQLEPQFTSI 182 (183)
T ss_dssp HHHHHHTCSEEEEHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred HHHHHcCCCEEEchHHHHHHHHHHHHHHhcCCccccc
Confidence 0 000 0000 11234556667777777777777654
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=88.40 E-value=1.4 Score=35.49 Aligned_cols=53 Identities=19% Similarity=0.141 Sum_probs=38.6
Q ss_pred CeEEEEcCCCCHhhHHHH-hCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEe
Q 015570 17 MLELVECDLEKRVQIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV 84 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~a-L~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~v 84 (404)
+++++.+|..+.+.+..+ +.++|+||+|.+.. ..| ..+++.++..+++++|..
T Consensus 48 ~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-----------~~~----~~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 48 DALVINGDCTKIKTLEDAGIEDADMYIAVTGKE-----------EVN----LMSSLLAKSYGINKTIAR 101 (140)
T ss_dssp SSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH-----------HHH----HHHHHHHHHTTCCCEEEE
T ss_pred CcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc-----------hHH----HHHHHHHHHcCCCEEEEE
Confidence 677889999998887755 78999999998631 122 356667777887777753
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=87.14 E-value=0.2 Score=50.59 Aligned_cols=71 Identities=14% Similarity=0.119 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCC------Ccchh--hHHHHHHHHHHHHHhCCCCEEEEeccC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDI------TGPYR--IDFQATKNLVDAATIAKVNHFIMVSSL 87 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~------~~~~~--vnv~~~~~Ll~Aa~~agVkrfI~vSS~ 87 (404)
.+++.+.+|+.|.+++.++++++|+||||++......... ..+.. .......+|+++|+++|++ +++..
T Consensus 47 ~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~---~i~g~ 123 (450)
T 1ff9_A 47 QHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT---VMNEI 123 (450)
T ss_dssp TTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE---EECSC
T ss_pred CCceEEEeecCCHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe---EEeCC
Confidence 3588899999999999999999999999998643210000 00000 0123578899999999984 34555
Q ss_pred cc
Q 015570 88 GT 89 (404)
Q Consensus 88 gv 89 (404)
+.
T Consensus 124 g~ 125 (450)
T 1ff9_A 124 GL 125 (450)
T ss_dssp BB
T ss_pred CC
Confidence 44
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=87.12 E-value=0.58 Score=46.39 Aligned_cols=48 Identities=8% Similarity=0.153 Sum_probs=39.3
Q ss_pred CCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVk 79 (404)
.+++.+.+|+.|.+++.+++++ +|+||||++... ...++++|.++|+.
T Consensus 53 ~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~~----------------~~~v~~a~l~~g~~ 102 (405)
T 4ina_A 53 GEIDITTVDADSIEELVALINEVKPQIVLNIALPYQ----------------DLTIMEACLRTGVP 102 (405)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGGG----------------HHHHHHHHHHHTCC
T ss_pred CceEEEEecCCCHHHHHHHHHhhCCCEEEECCCccc----------------ChHHHHHHHHhCCC
Confidence 3689999999999999999987 999999998521 25677788888875
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=84.54 E-value=2.1 Score=35.66 Aligned_cols=32 Identities=6% Similarity=0.190 Sum_probs=28.7
Q ss_pred CCeEEEEcCCCCHhhHHHH-hCCCCEEEEcCcC
Q 015570 16 EMLELVECDLEKRVQIEPA-LGNASVVICCIGA 47 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a-L~gvDvVI~~ag~ 47 (404)
.+++++.||.+|.+.+.++ +.++|+||.+.+.
T Consensus 49 ~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 49 DNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp TTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 4789999999999999887 8999999999864
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=82.64 E-value=2.9 Score=34.05 Aligned_cols=53 Identities=15% Similarity=0.028 Sum_probs=38.0
Q ss_pred CCeEEEEcCCCCHhhHHHH-hCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEE
Q 015570 16 EMLELVECDLEKRVQIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 83 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a-L~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~ 83 (404)
.+++++.+|.++.+.+..+ +.++|+||.+.+. ......++..+++.+..++|.
T Consensus 48 ~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~---------------~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 48 EGFDAVIADPTDESFYRSLDLEGVSAVLITGSD---------------DEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp TTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC---------------HHHHHHHHHHHHHHCCCCEEE
T ss_pred CCCcEEECCCCCHHHHHhCCcccCCEEEEecCC---------------HHHHHHHHHHHHHhCCceEEE
Confidence 4688999999999998876 5689999999872 122344556666666555553
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=80.46 E-value=5.2 Score=33.28 Aligned_cols=57 Identities=12% Similarity=-0.026 Sum_probs=40.4
Q ss_pred CCCeEEEEcCCCCHhhHHHH-hCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHh-CCCCEEEEecc
Q 015570 15 VEMLELVECDLEKRVQIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMVSS 86 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~a-L~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~-agVkrfI~vSS 86 (404)
..++.++.+|..+.+.+..+ +.++|+||.|.+.. .....+++.++. .+..++|....
T Consensus 61 ~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~---------------~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 61 EFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD---------------STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH---------------HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred cCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc---------------HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 34678889999998888776 78999999999741 123455666666 67667765443
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=80.02 E-value=4.3 Score=40.11 Aligned_cols=111 Identities=8% Similarity=-0.034 Sum_probs=65.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCCC------------------------CCc-------
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVFD------------------------ITG------- 57 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~d------------------------~~~------- 57 (404)
..+..+.||+.+.+.+.+++ .++|++||+++.......+ ...
T Consensus 112 ~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~ 191 (401)
T 4ggo_A 112 LYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAE 191 (401)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEEC
T ss_pred CCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeeccccccccccccccccccccccccc
Confidence 35678999999988877665 4899999999975321100 000
Q ss_pred -chhhHHHHHHH---------HHHHHHhCCC----CEEEEeccCcccCCCCchhhcccc-hHHHHHHHHHHHHHHH----
Q 015570 58 -PYRIDFQATKN---------LVDAATIAKV----NHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALIA---- 118 (404)
Q Consensus 58 -~~~vnv~~~~~---------Ll~Aa~~agV----krfI~vSS~gv~~~~~~~~~~~~~-~~y~~sK~~~E~~l~~---- 118 (404)
..+-+++++.. ++.+...+++ -++|-+|++|..... .... +.++..|...|...+.
T Consensus 192 pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~-----P~Y~~G~mG~AKaaLEa~~r~La~e 266 (401)
T 4ggo_A 192 PANDEEAAATVKVMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQ-----ALYRKGTIGKAKEHLEATAHRLNKE 266 (401)
T ss_dssp CCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGH-----HHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccCCceEEEEeccCcceee-----cCCCccHHHHHHHHHHHHHHHHHHh
Confidence 01122233332 3444555432 267888887764321 1111 2578999999988874
Q ss_pred -CCCCEEEEEcCcc
Q 015570 119 -SGLPYTIVRPGGM 131 (404)
Q Consensus 119 -~gl~~tIlRpg~~ 131 (404)
.++...++-++.+
T Consensus 267 L~~~~a~v~v~~a~ 280 (401)
T 4ggo_A 267 NPSIRAFVSVNKGL 280 (401)
T ss_dssp CTTEEEEEEECCCC
T ss_pred cCCCcEEEEEcCcc
Confidence 3455556566554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 404 | ||||
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 7e-07 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (111), Expect = 7e-07
Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 32 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91
+ + VI +G P + + +N+V A V+ + +S
Sbjct: 62 DKTVAGQDAVIVLLGTRNDL-----SPTTVMSEGARNIVAAMKAHGVDKVVACTS--AFL 114
Query: 92 FGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MERPTDAYKETHNITLSQED 150
P + V + + L SGL Y V P ++P T T++ +
Sbjct: 115 LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL-----TGAYTVTLDG 169
Query: 151 TLFGGQVSNLQVAELLA 167
+S + +
Sbjct: 170 RGPSRVISKHDLGHFML 186
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 404 | |||
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.83 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.82 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.81 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.77 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.76 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.76 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.75 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.73 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.72 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.7 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.69 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.68 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.68 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.65 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.64 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.63 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.63 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.62 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.6 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.6 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.59 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.58 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.55 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.55 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.49 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.43 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.42 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.32 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.27 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.24 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.88 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.84 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.82 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.79 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.78 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.77 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.76 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.75 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.73 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.71 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.7 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.7 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.69 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.66 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.65 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.64 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.64 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.64 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.64 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.62 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.61 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.61 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.59 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.59 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.59 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.5 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.49 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.48 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.48 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.46 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.46 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.46 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.44 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.44 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.43 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.43 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.42 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.42 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.4 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.39 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.39 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.37 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.34 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.32 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.3 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.27 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.24 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.19 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.16 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.1 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.06 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.04 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 97.89 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.77 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.77 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 97.74 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.7 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.5 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.47 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.42 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.24 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.18 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.11 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 96.91 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 96.9 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 96.18 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 89.4 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 84.08 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 83.99 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 81.93 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=6.6e-20 Score=165.51 Aligned_cols=161 Identities=14% Similarity=0.089 Sum_probs=131.3
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 14 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
...+++++.||+.|.+++.++|+++|+||||+|.... ....+++.+++++++++++++|++|||++|+.+++...
T Consensus 44 ~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~-----~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~ 118 (205)
T d1hdoa_ 44 GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-----LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDP 118 (205)
T ss_dssp SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC-----CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCT
T ss_pred cccccccccccccchhhHHHHhcCCCEEEEEeccCCc-----hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCC
Confidence 3478999999999999999999999999999987532 23346788999999999999999999999998875432
Q ss_pred CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCC
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 173 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~ 173 (404)
. .....+..|...|..+|+++++.|++||||||++|++.. ..+.+.+..++.....+|+++|||++++.+++++
T Consensus 119 ~--~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~----~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~ 192 (205)
T d1hdoa_ 119 T--KVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQP----LTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTD 192 (205)
T ss_dssp T--CSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCC----CCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred c--cccccccccchHHHHHHHHHHhcCCceEEEecceecCCC----CcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCC
Confidence 2 223445678999999999999999999999999998642 2345555555666667899999999999999988
Q ss_pred CCCCCcEEEEEcC
Q 015570 174 SLSYCKVVEVIAE 186 (404)
Q Consensus 174 ~~~~~~i~nI~~~ 186 (404)
+ +.++.+.+..+
T Consensus 193 ~-~~g~~~~~s~~ 204 (205)
T d1hdoa_ 193 E-YDGHSTYPSHQ 204 (205)
T ss_dssp T-TTTCEEEEECC
T ss_pred C-CCCEEEecCCc
Confidence 7 56788877653
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=3.5e-20 Score=181.07 Aligned_cols=188 Identities=10% Similarity=-0.072 Sum_probs=147.7
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCC---EEEEecc
Q 015570 14 PVEMLELVECDLEKRVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSS 86 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVk---rfI~vSS 86 (404)
...+++++++|++|.+.+.+++++ +|+|||||+.... ...++..++++|+.++.||+++|++.+++ ||||+||
T Consensus 53 ~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS 132 (357)
T d1db3a_ 53 CNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAST 132 (357)
T ss_dssp --CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred cCCCeEEEEeecCCHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Confidence 346899999999999999999985 5999999987532 23455667899999999999999997654 7999999
Q ss_pred CcccCCC-----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC---------------cc
Q 015570 87 LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------TH 142 (404)
Q Consensus 87 ~gv~~~~-----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~---------------~~ 142 (404)
..+++.. .+.....+.+.|+.+|+.+|++++. .++++++||++.+||++..... ..
T Consensus 133 ~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~ 212 (357)
T d1db3a_ 133 SELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLE 212 (357)
T ss_dssp GGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSC
T ss_pred hhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCC
Confidence 9887532 2223456778999999999999874 5899999999999998543211 11
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
.....+++...+++++++|+++++..+++... +++|||++++. +++.|+++.+...+|.
T Consensus 213 ~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~~---~~~yni~sg~~---~s~~~~~~~~~~~~g~ 271 (357)
T d1db3a_ 213 SCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ---PEDFVIATGVQ---YSVRQFVEMAAAQLGI 271 (357)
T ss_dssp CCEEESCTTCEECCEEHHHHHHHHHHTTSSSS---CCCEEECCCCC---EEHHHHHHHHHHTTTE
T ss_pred ceEEECCCCeeecceeechHHHHHHHHHhCCC---CCeEEECCCCc---eehHHHHHHHHHHhCC
Confidence 12333445556689999999999999887644 68999999985 8999999998888873
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.81 E-value=1.3e-19 Score=174.03 Aligned_cols=190 Identities=14% Similarity=0.038 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 14 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
...+++++.+|+.+...+...+.++|+|||+|+..... ..+....+++|+.++.+|+++|.+.++++|||+||..+++
T Consensus 53 ~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg 132 (322)
T d1r6da_ 53 ADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYG 132 (322)
T ss_dssp TCTTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred cCCCeEEEEeccccchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeec
Confidence 45789999999999999999999999999999875321 2344566789999999999999999999999999998875
Q ss_pred CC-----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------CcccEEEccCCc
Q 015570 92 FG-----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDT 151 (404)
Q Consensus 92 ~~-----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~~~~i~~~~~~~ 151 (404)
.. .+.....+...|+.+|..+|.+++. .++++++||++.+||+++... ....+.+.+.+.
T Consensus 133 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~ 212 (322)
T d1r6da_ 133 SIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA 212 (322)
T ss_dssp CCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCC
Confidence 43 2233456678999999999999974 689999999999999876432 123466666777
Q ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
..+.+||++|+|+++..++++... +++||+++++. .++.|+++.+.+.+|..
T Consensus 213 ~~r~~i~v~D~a~ai~~~~~~~~~--~~~~ni~~~~~---~s~~e~~~~i~~~~~~~ 264 (322)
T d1r6da_ 213 NVREWVHTDDHCRGIALVLAGGRA--GEIYHIGGGLE---LTNRELTGILLDSLGAD 264 (322)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCE---EEHHHHHHHHHHHHTCC
T ss_pred eEEccEEHHHHHHHHHHHHhCCCC--CCeeEEeeccc---chhHHHHHHHHHHhCCC
Confidence 778899999999999999998763 78999999986 99999999999998854
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.77 E-value=6.4e-19 Score=172.48 Aligned_cols=188 Identities=10% Similarity=-0.009 Sum_probs=150.2
Q ss_pred CCCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCC---------CCE
Q 015570 14 PVEMLELVECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK---------VNH 80 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~ag---------Vkr 80 (404)
...+++++++|++|.+.+..+++ ++|+|||||+.... ...++...+++|+.++.+|+++|++.+ ++|
T Consensus 48 ~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~ 127 (361)
T d1kewa_ 48 ESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFR 127 (361)
T ss_dssp TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCE
T ss_pred hcCCcEEEEccCCCHHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceE
Confidence 35689999999999999999887 68999999987532 234566778999999999999998764 459
Q ss_pred EEEeccCcccCCCCc---------------hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-
Q 015570 81 FIMVSSLGTNKFGFP---------------AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE- 140 (404)
Q Consensus 81 fI~vSS~gv~~~~~~---------------~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~- 140 (404)
|||+||..+++.... .....+.+.|+.+|..+|++++. .|+++++||++.+||+++....
T Consensus 128 ~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~ 207 (361)
T d1kewa_ 128 FHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKL 207 (361)
T ss_dssp EEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSH
T ss_pred EEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcH
Confidence 999999988754321 11345567899999999999975 6999999999999998764321
Q ss_pred ----------cccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 141 ----------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 141 ----------~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
...+.+.+.+...+.++|++|+|+++..++++... +++|||++++. .++.|+++.+....+
T Consensus 208 i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~--~~~~Ni~s~~~---~s~~~~~~~i~~~~~ 278 (361)
T d1kewa_ 208 IPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA--GETYNIGGHNE---KKNLDVVFTICDLLD 278 (361)
T ss_dssp HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCE---EEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCC--CCeEEECCCCC---cchHHHHhHhhhhcc
Confidence 13466666667777899999999999999988763 78999999875 888888888876554
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.9e-19 Score=172.59 Aligned_cols=182 Identities=12% Similarity=0.037 Sum_probs=140.5
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
..+++++..|+.+ .++.++|+|||||+.... ...++...+++|+.++.+|+++|++.++ ||||+||..+++.
T Consensus 48 ~~~~d~~~~~~~~-----~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~ 121 (312)
T d2b69a1 48 HENFELINHDVVE-----PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD 121 (312)
T ss_dssp CTTEEEEECCTTS-----CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBS
T ss_pred CCceEEEehHHHH-----HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecC
Confidence 3456666666543 456789999999987542 2345556789999999999999999997 8999999988754
Q ss_pred CCc----------hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC-------------cccEE
Q 015570 93 GFP----------AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------THNIT 145 (404)
Q Consensus 93 ~~~----------~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-------------~~~i~ 145 (404)
... .....+.+.|+.+|..+|.+++. .|+++++||++.+||+++.... ...+.
T Consensus 122 ~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~ 201 (312)
T d2b69a1 122 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 201 (312)
T ss_dssp CSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEE
T ss_pred CCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeE
Confidence 311 11335678999999999999964 5999999999999998654321 12355
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+.+++...+.+||++|+++++..+++... +++||++++.. .++.+++..+.+..|..
T Consensus 202 i~~~g~~~r~~i~v~D~~~~~~~~~~~~~---~~~~n~~~~~~---~~~~~~~~~i~~~~~~~ 258 (312)
T d2b69a1 202 VYGSGSQTRAFQYVSDLVNGLVALMNSNV---SSPVNLGNPEE---HTILEFAQLIKNLVGSG 258 (312)
T ss_dssp EESSSCCEEECEEHHHHHHHHHHHHTSSC---CSCEEESCCCE---EEHHHHHHHHHHHHTCC
T ss_pred EeCCCCeeEccEEHHHHHHHHHHHHhhcc---CCceEecCCcc---cchhhHHHHHHHHhCCC
Confidence 65666666789999999999999987654 77899999886 99999999999888743
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.76 E-value=8.5e-18 Score=163.52 Aligned_cols=188 Identities=15% Similarity=-0.008 Sum_probs=148.7
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC---CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~---~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
....++..+|+.+.+.+..+++++|+|||+++..... ..+.......|+.++.+|+++|++.+++||||+||..+++
T Consensus 57 ~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~ 136 (363)
T d2c5aa1 57 MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 136 (363)
T ss_dssp GTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSC
T ss_pred cccCcEEEeechhHHHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCcccccccccccccc
Confidence 3567899999999999999999999999999876432 2234445688999999999999999999999999998865
Q ss_pred CCCc------------hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC---------------
Q 015570 92 FGFP------------AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------- 140 (404)
Q Consensus 92 ~~~~------------~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~--------------- 140 (404)
.... .....+.+.|+.+|+.+|++++. .|+++++||++.+||+.+....
T Consensus 137 ~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~ 216 (363)
T d2c5aa1 137 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT 216 (363)
T ss_dssp GGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHH
T ss_pred ccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCccccccccccccccccccc
Confidence 3211 11234567899999999998874 5999999999999997654211
Q ss_pred -cccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 141 -THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 141 -~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
.......+++...+.+||++|+++++..++++.. +++|||+++.. +++.|+++.+.+..|..
T Consensus 217 ~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~~---~~~~ni~~~~~---~s~~~l~~~i~~~~g~~ 279 (363)
T d2c5aa1 217 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEM---VSMNEMAEMVLSFEEKK 279 (363)
T ss_dssp CSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSSC---CSCEEECCCCC---EEHHHHHHHHHHTTTCC
T ss_pred ccccccccCCCCeEEEEeehhHHHHHHHHHHhCCC---CCeEEEecCCc---ccHHHHHHHHHHHhCCC
Confidence 1223444455566789999999999999998654 78999999986 89999999998888743
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.75 E-value=4e-18 Score=164.59 Aligned_cols=190 Identities=13% Similarity=0.009 Sum_probs=154.8
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
.+++++.+|+.|...+.....+.+.|+|+++.... ...++...+++|+.++.+|+++|.+.++++|||+||..+++..
T Consensus 70 ~~~~~~~~d~~d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~ 149 (341)
T d1sb8a_ 70 SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDH 149 (341)
T ss_dssp TTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC
T ss_pred CCeeEEeeccccccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCC
Confidence 67999999999999999999999999999986532 2334555788999999999999999999999999999987643
Q ss_pred -----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC---------------cccEEEccC
Q 015570 94 -----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQE 149 (404)
Q Consensus 94 -----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~---------------~~~i~~~~~ 149 (404)
.+....++.+.|+.+|..+|++++. .++++++||++.+||++..... ...+.+.++
T Consensus 150 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~ 229 (341)
T d1sb8a_ 150 PGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGD 229 (341)
T ss_dssp CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESS
T ss_pred CCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCC
Confidence 2233566778999999999999864 5899999999999997654321 122556666
Q ss_pred CccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+...++++|++|+++++..++.......+++|+++++.. .++.|++..|.+..+..
T Consensus 230 g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~---~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 230 GETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGR---TSLNQLFFALRDGLAEN 285 (341)
T ss_dssp SCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCC---EEHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEEEeccchhhhhhhhccccccceeeeeccccc---chHHHHHHHHHHHhccc
Confidence 667778999999999999999876555688999998875 99999999988877744
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=1.2e-17 Score=161.19 Aligned_cols=189 Identities=13% Similarity=0.045 Sum_probs=145.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK 91 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~ 91 (404)
.+++++++|++|.+.+.++++ ++|+|||+|+.... ...++...+++|+.++.+|+++|++.++++||++||..++.
T Consensus 50 ~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~ 129 (338)
T d1udca_ 50 KHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYG 129 (338)
T ss_dssp SCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred CCCEEEEeecCCHHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEc
Confidence 589999999999999999997 89999999986532 22355677899999999999999999999999999998865
Q ss_pred CCCc------hhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCcc---------------------
Q 015570 92 FGFP------AAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYK--------------------- 139 (404)
Q Consensus 92 ~~~~------~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~--------------------- 139 (404)
.... .....+.+.|+.+|..+|+++.. .++.+++||++++||+.....
T Consensus 130 ~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~ 209 (338)
T d1udca_ 130 DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAV 209 (338)
T ss_dssp SCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHT
T ss_pred cccccccccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHh
Confidence 3321 11345678999999999999874 589999999999999754211
Q ss_pred -CcccEEEccC------CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 140 -ETHNITLSQE------DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 140 -~~~~i~~~~~------~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
....+.+.+. +...++++++.|+++++..++... ....+++||++++.. +++.|+++.+.+.+|.
T Consensus 210 ~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~---~si~e~~~~i~~~~g~ 282 (338)
T d1udca_ 210 GRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG---NSVLDVVNAFSKACGK 282 (338)
T ss_dssp TSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSC---EEHHHHHHHHHHHHTS
T ss_pred cCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCC---CcHHHHHHHHHHHHCC
Confidence 0112333332 334456899999998877666532 223467999999875 8999999999998884
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.72 E-value=1.6e-17 Score=160.85 Aligned_cols=192 Identities=16% Similarity=0.081 Sum_probs=153.1
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF 92 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~ 92 (404)
..+++++.+|++|.+.+..++.++|.|+|+|+..... ..++...+++|+.++.+|++++...+. ++|++||..+++.
T Consensus 51 ~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~ 129 (346)
T d1oc2a_ 51 GDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGD 129 (346)
T ss_dssp SSSEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCC
T ss_pred cCCeEEEEccCCCHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecc
Confidence 4689999999999999999999999999999876322 245667789999999999999999986 7899988877642
Q ss_pred C-----------------CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc-----------C
Q 015570 93 G-----------------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------E 140 (404)
Q Consensus 93 ~-----------------~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~-----------~ 140 (404)
. .......+...|+.+|..+|++++. .|+++++||++.+||+..... .
T Consensus 130 ~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~ 209 (346)
T d1oc2a_ 130 LPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILA 209 (346)
T ss_dssp BCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHH
T ss_pred cCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHc
Confidence 1 0111334557899999999998864 689999999999999865321 1
Q ss_pred cccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCCCCC
Q 015570 141 THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESI 212 (404)
Q Consensus 141 ~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~~~ 212 (404)
...+.+.+++...+.+||++|+|++++.++.+... ++.|++++++. .++.++++.|.+.++.....+
T Consensus 210 ~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~ 276 (346)
T d1oc2a_ 210 GIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM--GETYLIGADGE---KNNKEVLELILEKMGQPKDAY 276 (346)
T ss_dssp TCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT--TCEEEECCSCE---EEHHHHHHHHHHHTTCCTTCS
T ss_pred CCceeEeCCCCccccccchhhHHHHHHHHHhhccc--Ccccccccccc---ccchHHHHHHHHHhCCCCcce
Confidence 22345666666777899999999999999887764 78899998885 999999999999998765433
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.70 E-value=6.4e-17 Score=145.77 Aligned_cols=183 Identities=25% Similarity=0.333 Sum_probs=135.6
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCC---------------CCCCCcchhhHHHHHHHHHHHHHhCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKE---------------VFDITGPYRIDFQATKNLVDAATIAKVN 79 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~---------------~~d~~~~~~vnv~~~~~Ll~Aa~~agVk 79 (404)
..+++++.+|+.|.+.+.++++++|+|||+++..... ..+......+|+.+++++++.+...+++
T Consensus 46 ~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (252)
T d2q46a1 46 GGEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK 125 (252)
T ss_dssp TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS
T ss_pred cCCcEEEEeeeccccccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccccc
Confidence 3688999999999999999999999999999864211 1223344577889999999999999999
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccCcccEEEccCC---ccccCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQED---TLFGGQ 156 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~---~~~~~~ 156 (404)
++.+.|+.+.+....+. .......|...+...+.+....|+++++|||+++||+.... ..+...... ....++
T Consensus 126 ~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~ 201 (252)
T d2q46a1 126 HIVVVGSMGGTNPDHPL-NKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV---RELLVGKDDELLQTDTKT 201 (252)
T ss_dssp EEEEEEETTTTCTTCGG-GGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTS---SCEEEESTTGGGGSSCCE
T ss_pred ccccccccccCCCCccc-ccccccchhhhhhhhhhhhhcccccceeecceEEECCCcch---hhhhhccCcccccCCCCe
Confidence 99999988776544322 12233457778888888888999999999999999975532 222222221 222468
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCC---CccHHHHHHHcc
Q 015570 157 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP---LTPMEELLAKIP 202 (404)
Q Consensus 157 Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~---~~si~ell~~i~ 202 (404)
|+++|||++++.+|+++. ..+++|||+++.... ..+|.+++.++.
T Consensus 202 i~~~Dva~a~~~~l~~~~-~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 202 VPRADVAEVCIQALLFEE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp EEHHHHHHHHHHHTTCGG-GTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred EEHHHHHHHHHHHhCCcc-ccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 999999999999998877 578999999865433 345555555544
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=5.2e-17 Score=156.41 Aligned_cols=192 Identities=14% Similarity=0.107 Sum_probs=145.0
Q ss_pred CCCCeEEEEcCCCCHhhHHH-HhCCCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 14 PVEMLELVECDLEKRVQIEP-ALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~-aL~gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
...+++++.+|+++.+.+.+ +++++|+|||||+..... ..+....+.+|+.++.+|+++|.+.++ +++|+||..++
T Consensus 43 ~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~ 121 (342)
T d2blla1 43 NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVY 121 (342)
T ss_dssp TCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGG
T ss_pred cCCCeEEEECccCChHHHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccccc-ccccccccccc
Confidence 45789999999998766554 778999999999976421 223345678999999999999999997 55678887765
Q ss_pred CCCCc------------hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC--------------
Q 015570 91 KFGFP------------AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------- 140 (404)
Q Consensus 91 ~~~~~------------~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~-------------- 140 (404)
+.... .....+...|+.+|..+|++++. .|++++++|++.+||++.....
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~ 201 (342)
T d2blla1 122 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLI 201 (342)
T ss_dssp BTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHH
T ss_pred ccccccccccccccccccccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHH
Confidence 43211 11224557899999999999975 5899999999999997543211
Q ss_pred -----cccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 141 -----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 141 -----~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+.+.+++...+.++|++|+++++..++++.. ...+++|||++++. .+++.|+++.+.+.+|..
T Consensus 202 ~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~--~~t~~~l~~~i~~~~~~~ 273 (342)
T d2blla1 202 LNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPEN--EASIEELGEMLLASFEKH 273 (342)
T ss_dssp HHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTS--EEEHHHHHHHHHHHHHTC
T ss_pred HHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecccc--hhHHHHHHHHHHHHhCCC
Confidence 1235556666777789999999999999998753 24578999986542 379999999998888743
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=4.1e-17 Score=149.81 Aligned_cols=161 Identities=17% Similarity=0.178 Sum_probs=123.9
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+++++.+|+.+.+.+..++.++|+||||+|.... ..+...+.++|+.++.+++++|++.++++|||+|+.+++....
T Consensus 58 ~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~ 136 (232)
T d2bkaa1 58 YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN 136 (232)
T ss_dssp GGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS
T ss_pred cceeeeeeeccccccccccccccccccccccccccc-ccchhhhhhhcccccceeeecccccCccccccCCccccccCcc
Confidence 467899999999999999999999999999987532 1233456789999999999999999999999999998865432
Q ss_pred chhhcccchHHHHHHHHHHHHHHHCCCC-EEEEEcCccCCCCCCccCccc-----EEEccCCccccCcccHHHHHHHHHH
Q 015570 95 PAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPGGMERPTDAYKETHN-----ITLSQEDTLFGGQVSNLQVAELLAC 168 (404)
Q Consensus 95 ~~~~~~~~~~y~~sK~~~E~~l~~~gl~-~tIlRpg~~~G~~~~~~~~~~-----i~~~~~~~~~~~~Is~~DVA~ai~~ 168 (404)
+.|+++|+++|+++++.+++ ++|||||++||+.+....... +............|+++|+|++++.
T Consensus 137 --------~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~ 208 (232)
T d2bkaa1 137 --------FLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN 208 (232)
T ss_dssp --------SHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred --------chhHHHHHHhhhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHH
Confidence 56999999999999999986 999999999997654211100 1111122222346999999999999
Q ss_pred HHhCCCCCCCcEEEEEcC
Q 015570 169 MAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 169 ~l~~~~~~~~~i~nI~~~ 186 (404)
++.++.. ++++.+.+.
T Consensus 209 ~~~~~~~--~~~~i~~~~ 224 (232)
T d2bkaa1 209 NVVRPRD--KQMELLENK 224 (232)
T ss_dssp HHTSCCC--SSEEEEEHH
T ss_pred HHhcCcc--CCeEEEcHH
Confidence 9987763 555555443
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1.9e-16 Score=152.35 Aligned_cols=188 Identities=11% Similarity=-0.100 Sum_probs=144.3
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCC---CEEEEeccC
Q 015570 15 VEMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSL 87 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agV---krfI~vSS~ 87 (404)
..+++++.+|++|.+.+..++. ++++|+|+++..... ..+...++++|+.++.+|+++|++.++ .+|||+||.
T Consensus 55 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~ 134 (347)
T d1t2aa_ 55 EGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS 134 (347)
T ss_dssp --CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred cCCcEEEEeecCCchhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecch
Confidence 3588999999999999999986 678999999865321 223344568999999999999999876 389999999
Q ss_pred cccCCC-----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCcc---------------Cccc
Q 015570 88 GTNKFG-----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHN 143 (404)
Q Consensus 88 gv~~~~-----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~---------------~~~~ 143 (404)
.+++.. .+....++.+.|+.+|..+|++++. .+++++++|++.+||+..... ....
T Consensus 135 ~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~ 214 (347)
T d1t2aa_ 135 ELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLE 214 (347)
T ss_dssp GGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCS
T ss_pred heecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcc
Confidence 887532 2233556778999999999999864 589999999999999854321 1122
Q ss_pred EEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 144 ITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 144 i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+...+++...+++++++|+++++..++++.. .+.+++..... .++.+....+....|..
T Consensus 215 ~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 273 (347)
T d1t2aa_ 215 CFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE---PEDFVIATGEV---HSVREFVEKSFLHIGKT 273 (347)
T ss_dssp CEEESCTTCEECCEEHHHHHHHHHHHHHSSS---CCCEEECCSCC---EEHHHHHHHHHHHTTCC
T ss_pred eeecCCCcceeeeeEecHHHHHHHHHhhcCC---Cccceeccccc---cccchhhhhhhhhhcce
Confidence 3444555666789999999999999998865 45677777764 88998888888777753
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.65 E-value=5.4e-16 Score=147.54 Aligned_cols=189 Identities=10% Similarity=-0.108 Sum_probs=146.0
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCC-EEEEeccCcc
Q 015570 15 VEMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGT 89 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVk-rfI~vSS~gv 89 (404)
..+++++.+|+.|...+.+.+. ..++|+|+++..... ..+....+..|+.++.+|+++|++.+++ +||+.|+..+
T Consensus 48 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~ 127 (321)
T d1rpna_ 48 EGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEM 127 (321)
T ss_dssp GGGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred cCCcEEEEccccChHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhh
Confidence 4689999999999999998776 567888888765322 2334556788999999999999998865 7888888766
Q ss_pred cCCC-----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC---------------cccEE
Q 015570 90 NKFG-----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNIT 145 (404)
Q Consensus 90 ~~~~-----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~---------------~~~i~ 145 (404)
++.. .+.....+.+.|+.+|..+|++++. .+++++++|++.+||+...... .....
T Consensus 128 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i 207 (321)
T d1rpna_ 128 FGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQEL 207 (321)
T ss_dssp GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCE
T ss_pred cCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcE
Confidence 5432 1223455778999999999999874 6899999999999998643211 11233
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
..+++..++.++|++|+|+++..++++.. ++.||+++++. .++.++++.+.+..|...
T Consensus 208 ~~g~g~~~r~~i~v~D~~~~~~~~~~~~~---~~~~ni~~~~~---~s~~~~~~~~~~~~~~~~ 265 (321)
T d1rpna_ 208 RLGNVDAKRDWGFAGDYVEAMWLMLQQDK---ADDYVVATGVT---TTVRDMCQIAFEHVGLDY 265 (321)
T ss_dssp EESCTTCEEECEEHHHHHHHHHHHHHSSS---CCCEEECCSCE---EEHHHHHHHHHHTTTCCG
T ss_pred EECCCCeEEccEEeHHHHHHHHHHHhcCC---cCCceeccccc---ceehhhhHHHHHHhCCCc
Confidence 44455566789999999999999998876 57899998875 999999999999888543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.64 E-value=3.1e-16 Score=151.63 Aligned_cols=191 Identities=14% Similarity=0.046 Sum_probs=141.3
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCC--CCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 15 VEMLELVECDLEKRVQIEPALG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~--~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
..+++++++|++|.+.+..++. ++|+|||||+... ....+...++.+|+.++.+|+++|++.+++|||++||..++
T Consensus 50 ~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vy 129 (347)
T d1z45a2 50 KHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVY 129 (347)
T ss_dssp TSCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGG
T ss_pred ccCCeEEEeecCCHHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeee
Confidence 4689999999999999999886 8999999999763 22234456788999999999999999999999999999887
Q ss_pred CCCC---------chhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCcc-------C--------
Q 015570 91 KFGF---------PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYK-------E-------- 140 (404)
Q Consensus 91 ~~~~---------~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~-------~-------- 140 (404)
+... ......+...|+.+|..+|++++. .++++++||++.+||...... .
T Consensus 130 g~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~ 209 (347)
T d1z45a2 130 GDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYM 209 (347)
T ss_dssp CCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH
T ss_pred cCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHH
Confidence 5321 112345667899999999998864 478999999999987532110 0
Q ss_pred -------cccEEEccCC------ccccCcccHHHHHHHHHHHHhC-----CCCCCCcEEEEEcCCCCCCccHHHHHHHcc
Q 015570 141 -------THNITLSQED------TLFGGQVSNLQVAELLACMAKN-----RSLSYCKVVEVIAETTAPLTPMEELLAKIP 202 (404)
Q Consensus 141 -------~~~i~~~~~~------~~~~~~Is~~DVA~ai~~~l~~-----~~~~~~~i~nI~~~~~~~~~si~ell~~i~ 202 (404)
...+.+.+++ ...+++++..|++.+++.+++. .....+++|||++++. .++.|+++.+.
T Consensus 210 ~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~---~s~~e~~~~i~ 286 (347)
T d1z45a2 210 AQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKG---STVFEVYHAFC 286 (347)
T ss_dssp HHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCC---EEHHHHHHHHH
T ss_pred HHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCc---ccHHHHHHHHH
Confidence 0011222222 2234578888888888777643 1223578999998875 89999999999
Q ss_pred cccCCC
Q 015570 203 SQRAEP 208 (404)
Q Consensus 203 ~~~g~~ 208 (404)
+.+|..
T Consensus 287 ~~~~~~ 292 (347)
T d1z45a2 287 KASGID 292 (347)
T ss_dssp HHHTCC
T ss_pred HHHCCC
Confidence 988854
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.63 E-value=6.4e-16 Score=151.38 Aligned_cols=191 Identities=13% Similarity=-0.005 Sum_probs=144.1
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcc
Q 015570 15 VEMLELVECDLEKRVQIEPALG---NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 89 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv 89 (404)
..+++++.+|++|.+.+.++++ ++|+|||+|+..... ..+....+++|+.++.++++++++.++++++++|+..+
T Consensus 68 ~~~~~~~~~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~ 147 (383)
T d1gy8a_ 68 DRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAI 147 (383)
T ss_dssp TCCCEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred ccceEEEECcccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccc
Confidence 3578999999999999998875 789999999975321 22334557899999999999999999999999988876
Q ss_pred cCCCC------------chhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccCc------------
Q 015570 90 NKFGF------------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET------------ 141 (404)
Q Consensus 90 ~~~~~------------~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~------------ 141 (404)
+.... ......+...|+.+|..+|++++. .|++++++|++.+||+++.....
T Consensus 148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ 227 (383)
T d1gy8a_ 148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPI 227 (383)
T ss_dssp TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHH
T ss_pred ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHH
Confidence 43221 112345678999999999999975 58999999999999986643210
Q ss_pred ------------------------ccEEEcc------CCccccCcccHHHHHHHHHHHHhCCC-------CCCCcEEEEE
Q 015570 142 ------------------------HNITLSQ------EDTLFGGQVSNLQVAELLACMAKNRS-------LSYCKVVEVI 184 (404)
Q Consensus 142 ------------------------~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~-------~~~~~i~nI~ 184 (404)
..+.+.+ ++...++++|++|++++++.+++... ...+++|||+
T Consensus 228 ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~ 307 (383)
T d1gy8a_ 228 ILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLG 307 (383)
T ss_dssp HHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEES
T ss_pred HHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeC
Confidence 0111221 13334568999999999999886421 1235789998
Q ss_pred cCCCCCCccHHHHHHHcccccCCC
Q 015570 185 AETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 185 ~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+++. +++.|+++.+.+..|..
T Consensus 308 s~~~---~s~~el~~~i~~~~~~~ 328 (383)
T d1gy8a_ 308 TSRG---YSVREVIEVARKTTGHP 328 (383)
T ss_dssp CSCC---EEHHHHHHHHHHHHCCC
T ss_pred CCCc---eeHHHHHHHHHHHhCCC
Confidence 8875 99999999999988743
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.63 E-value=7.7e-16 Score=151.17 Aligned_cols=186 Identities=12% Similarity=0.011 Sum_probs=133.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCCC--CC---CCcchhhHHHHHHHHHHHHHhCCCC-EEEEeccC
Q 015570 16 EMLELVECDLEKRVQIEPALG--NASVVICCIGASEKEV--FD---ITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSL 87 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~~--~d---~~~~~~vnv~~~~~Ll~Aa~~agVk-rfI~vSS~ 87 (404)
.+++++.+||+|.+.+..+|+ ++|+|||+|+...... .+ ...++..|+.++.+|+++|++.+++ +||+.|+.
T Consensus 67 ~~i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~ 146 (393)
T d1i24a_ 67 KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTM 146 (393)
T ss_dssp CCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCG
T ss_pred CCcEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccc
Confidence 579999999999999999997 5699999998653211 12 2245678999999999999998766 67777777
Q ss_pred cccCCCCch------------------hhcccchHHHHHHHHHHHHHH----HCCCCEEEEEcCccCCCCCCccC-----
Q 015570 88 GTNKFGFPA------------------AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE----- 140 (404)
Q Consensus 88 gv~~~~~~~------------------~~~~~~~~y~~sK~~~E~~l~----~~gl~~tIlRpg~~~G~~~~~~~----- 140 (404)
.++...... ....+...|+.+|+.+|++++ ..|+++++||++.+||+......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~ 226 (393)
T d1i24a_ 147 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEEL 226 (393)
T ss_dssp GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGG
T ss_pred ccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccc
Confidence 665432110 023455689999999999986 46999999999999997643211
Q ss_pred -----------------------cccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEE-EcCCCCCCccHHH
Q 015570 141 -----------------------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV-IAETTAPLTPMEE 196 (404)
Q Consensus 141 -----------------------~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI-~~~~~~~~~si~e 196 (404)
...+.+.+++...++++|++|+++++..++++... .+..+.+ .+++. +++.+
T Consensus 227 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~-~g~~~~~~~~~~~---~si~e 302 (393)
T d1i24a_ 227 RNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK-AGEFRVFNQFTEQ---FSVNE 302 (393)
T ss_dssp CCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC-TTCEEEEEECSEE---EEHHH
T ss_pred ccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcc-cceeeeecCCCCe---eEHHH
Confidence 12345556666677899999999999999998763 3333222 22232 67777
Q ss_pred HHHHccccc
Q 015570 197 LLAKIPSQR 205 (404)
Q Consensus 197 ll~~i~~~~ 205 (404)
+++.|.+..
T Consensus 303 l~~~i~~~~ 311 (393)
T d1i24a_ 303 LASLVTKAG 311 (393)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766665543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=8.2e-16 Score=148.29 Aligned_cols=190 Identities=12% Similarity=0.035 Sum_probs=142.4
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 15 VEMLELVECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
..+++++++|++|.+.+.+++. +.++|+|+|+.... ...++...++.|+.++.+|++++++.++++|||+||..++
T Consensus 57 ~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~ 136 (346)
T d1ek6a_ 57 GRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVY 136 (346)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred CCCcEEEEeeccccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceee
Confidence 3679999999999999999886 45679999987532 1234556678999999999999999999999999999876
Q ss_pred CCCCchh------hcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCcc--------C-----------
Q 015570 91 KFGFPAA------ILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYK--------E----------- 140 (404)
Q Consensus 91 ~~~~~~~------~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~--------~----------- 140 (404)
+...... .....+.|+.+|..+|+.+++ .++.+++||++.+||+..... .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (346)
T d1ek6a_ 137 GNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVA 216 (346)
T ss_dssp CSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH
T ss_pred eccccccccccccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHH
Confidence 5442211 234566899999999998874 589999999999999743210 0
Q ss_pred ---cccEEEcc------CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 141 ---THNITLSQ------EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 141 ---~~~i~~~~------~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
...+.+.+ .+...++++|++|+|+++..++.... ...+++|||+++.. .++.|+++.+.+..|.
T Consensus 217 ~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~---~s~~dl~~~i~~~~~~ 290 (346)
T d1ek6a_ 217 IGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG---YSVLQMVQAMEKASGK 290 (346)
T ss_dssp HTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC---EEHHHHHHHHHHHHCS
T ss_pred HcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCc---ccHHHHHHHHHHHhCC
Confidence 01122222 12233568999999999887764432 23467999999875 9999999999999884
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=4e-15 Score=141.18 Aligned_cols=182 Identities=12% Similarity=0.018 Sum_probs=136.1
Q ss_pred cCCCCHhhHHHHhC--CCCEEEEcCcCCCCC---CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc--
Q 015570 23 CDLEKRVQIEPALG--NASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP-- 95 (404)
Q Consensus 23 gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~---~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~-- 95 (404)
+|+.|.+.+.+.+. ++|+|||+++..... ..+...++..|+.++.+|+++|++.+++||||+||.++++....
T Consensus 38 ~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~ 117 (315)
T d1e6ua_ 38 LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP 117 (315)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS
T ss_pred ccccCHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCC
Confidence 57788888888775 689999999775432 12334456789999999999999999999999999998764321
Q ss_pred ---hh-----hcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC--------------------ccc
Q 015570 96 ---AA-----ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------------THN 143 (404)
Q Consensus 96 ---~~-----~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~--------------------~~~ 143 (404)
.. ...+.+.|+.+|.++|++++. .|+++++||++++||+++.... ...
T Consensus 118 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (315)
T d1e6ua_ 118 MAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPD 197 (315)
T ss_dssp BCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSE
T ss_pred ccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCc
Confidence 11 112235799999999999874 5999999999999998664321 123
Q ss_pred EEEccCCccccCcccHHHHHHHHHHHHhCCC-------CCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 144 ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-------LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 144 i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-------~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
+.+.+.+...+.+++++|+++++..++.+.. ......++++.+.. ..+.++++.+.+..|.
T Consensus 198 ~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~i~~~~~~ 265 (315)
T d1e6ua_ 198 VVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD---CTIRELAQTIAKVVGY 265 (315)
T ss_dssp EEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC---EEHHHHHHHHHHHHTC
T ss_pred eEEcCCCceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCCcc---hHHHHHHHHHHHHhCC
Confidence 4455555666789999999999999886642 22356788887764 7888888888777763
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.60 E-value=2.1e-15 Score=145.70 Aligned_cols=184 Identities=14% Similarity=-0.007 Sum_probs=133.0
Q ss_pred CeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhC-CCCEEEEeccCcccCCCC-
Q 015570 17 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF- 94 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~a-gVkrfI~vSS~gv~~~~~- 94 (404)
....+.+|+.|.+.+..++.++|+|||+++.... ..+...+++.|+.++.+|+++|.+. ++++|||+||.++.....
T Consensus 63 ~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a~~~~~-~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~ 141 (342)
T d1y1pa1 63 FETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKP 141 (342)
T ss_dssp EEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCT
T ss_pred ccEEEeccccchhhhhhhcccchhhhhhcccccc-cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCC
Confidence 3456889999999999999999999999987643 2344556788999999999999886 799999999975422110
Q ss_pred ------------------------chhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCc---
Q 015570 95 ------------------------PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET--- 141 (404)
Q Consensus 95 ------------------------~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~--- 141 (404)
.....++.+.|+.+|+.+|++++. .++.+++|||+.+||+.......
T Consensus 142 ~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~ 221 (342)
T d1y1pa1 142 NVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGS 221 (342)
T ss_dssp TCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCH
T ss_pred CCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccc
Confidence 011234567899999999987653 36788999999999975322111
Q ss_pred ----------ccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 142 ----------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 142 ----------~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
+.......+...+.++|++|+|++++.++++... ++.+++++++. +++.|+++.|.+..+
T Consensus 222 ~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~~--~g~~~~~~~~~---~t~~eia~~i~k~~p 291 (342)
T d1y1pa1 222 TSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQI--ERRRVYGTAGT---FDWNTVLATFRKLYP 291 (342)
T ss_dssp HHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTC--CSCEEEECCEE---ECHHHHHHHHHHHCT
T ss_pred hHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCccc--cceEEEEcCCc---eEHHHHHHHHHHHcC
Confidence 0111111122234589999999999999988763 34455666664 899999998887764
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.59 E-value=1e-15 Score=143.79 Aligned_cols=181 Identities=16% Similarity=0.093 Sum_probs=139.1
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 94 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~ 94 (404)
..+++++.+|+.|.+.+..++.+++++|++++.... ..|..+..+++++|.+.++.++|+.|+.+++....
T Consensus 53 ~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~ 123 (312)
T d1qyda_ 53 QLGAKLIEASLDDHQRLVDALKQVDVVISALAGGVL---------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIM 123 (312)
T ss_dssp TTTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSSS---------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSC
T ss_pred cCCcEEEEeecccchhhhhhccCcchhhhhhhhccc---------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCc
Confidence 467999999999999999999999999999986432 23455678899999998877888889887754331
Q ss_pred chhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc---------CcccEEEccCCccccCcccHHHHHHH
Q 015570 95 PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVAEL 165 (404)
Q Consensus 95 ~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~---------~~~~i~~~~~~~~~~~~Is~~DVA~a 165 (404)
.....+...|...+..+++++...+++|+++|++.+||...... ....+.+.+.+.....+|+++|||++
T Consensus 124 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 202 (312)
T d1qyda_ 124 -EHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY 202 (312)
T ss_dssp -CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHH
T ss_pred -ccccchhhhhhHHHHHHHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHH
Confidence 22334556788999999999999999999999999997432211 12334445555566679999999999
Q ss_pred HHHHHhCCCCCCCcE-EEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 166 LACMAKNRSLSYCKV-VEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 166 i~~~l~~~~~~~~~i-~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
++.++.++. ..++. +++++++. +++.|+++.+.+++|.+.
T Consensus 203 ~~~~l~~~~-~~~~~~~~~~~~~~---~s~~e~~~~~~~~~g~~~ 243 (312)
T d1qyda_ 203 TIKSIDDPQ-TLNKTMYIRPPMNI---LSQKEVIQIWERLSEQNL 243 (312)
T ss_dssp HHHHTTCGG-GSSSEEECCCGGGE---EEHHHHHHHHHHHHTCCC
T ss_pred HHHHhcCcc-ccCceEEEeCCCcC---CCHHHHHHHHHHHHCCCC
Confidence 999998877 44554 55655553 899999999999988654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.58 E-value=1.5e-15 Score=136.72 Aligned_cols=146 Identities=21% Similarity=0.265 Sum_probs=106.0
Q ss_pred EEcCCCCHhhHHHHh-CCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCchhhc
Q 015570 21 VECDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAIL 99 (404)
Q Consensus 21 V~gDl~d~~~l~~aL-~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~~~~~ 99 (404)
+..+..|..++...+ .++|+||||+|.......+...+..+|+.++.+++++|++.+++|||++|+.+++...
T Consensus 45 ~~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~------ 118 (212)
T d2a35a1 45 LDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS------ 118 (212)
T ss_dssp EECCBSCHHHHGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------
T ss_pred ccccccchhhhhhccccchheeeeeeeeeccccccccccccchhhhhhhccccccccccccccccccccccccc------
Confidence 344445554444444 4689999999876433344456788999999999999999999999999999886543
Q ss_pred ccchHHHHHHHHHHHHHHHCCCC-EEEEEcCccCCCCCCccCcccEEEccCC--ccccCcccHHHHHHHHHHHHhCCC
Q 015570 100 NLFWGVLLWKRKAEEALIASGLP-YTIVRPGGMERPTDAYKETHNITLSQED--TLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 100 ~~~~~y~~sK~~~E~~l~~~gl~-~tIlRpg~~~G~~~~~~~~~~i~~~~~~--~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
...|..+|+++|+++++.+++ |+|+||+.|||+.+.......+...... ...+..|+++|||++++.+++++.
T Consensus 119 --~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~ 194 (212)
T d2a35a1 119 --SIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG 194 (212)
T ss_dssp --SSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred --ccchhHHHHHHhhhccccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence 246999999999999998885 9999999999986543211111000000 001135999999999999998766
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.55 E-value=3.7e-15 Score=141.78 Aligned_cols=192 Identities=14% Similarity=0.072 Sum_probs=143.3
Q ss_pred CCCeEEEEcCCCCHhhHHHHhCC--CCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc
Q 015570 15 VEMLELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN 90 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~g--vDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~ 90 (404)
..+++++.+|++|.+.+.+++++ +|+|||||+..... ..++...+++|+.|+.+|+++|.+.+++++|+.||.++.
T Consensus 48 ~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~ 127 (338)
T d1orra_ 48 LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKV 127 (338)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred cCCcEEEEcccCCHHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence 46899999999999999999975 59999999876432 234556788999999999999999999877777776542
Q ss_pred -CCCCc---------------------hhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC----
Q 015570 91 -KFGFP---------------------AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---- 140 (404)
Q Consensus 91 -~~~~~---------------------~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~---- 140 (404)
..... .....+...|+..|...|.++.. .++..+++|+..+|+.......
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (338)
T d1orra_ 128 YGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGW 207 (338)
T ss_dssp GTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCH
T ss_pred cccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccc
Confidence 21100 11234567899999999988764 6889999999988764332110
Q ss_pred ---------------cccEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 141 ---------------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 141 ---------------~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
...+.+.+++...++++|++|++++++.++++.....++++++..+.. ..+++.|++..+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~-~~~s~~e~~~~i~~~~ 286 (338)
T d1orra_ 208 VGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIV-NSLSLLELFKLLEDYC 286 (338)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGG-GEEEHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhccccccCcccccccccc-ccccHHHHHHHHHHHH
Confidence 123566666667778999999999999999876545678999855421 2378999999988887
Q ss_pred CC
Q 015570 206 AE 207 (404)
Q Consensus 206 g~ 207 (404)
|.
T Consensus 287 ~~ 288 (338)
T d1orra_ 287 NI 288 (338)
T ss_dssp TC
T ss_pred CC
Confidence 74
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.55 E-value=7.3e-15 Score=140.48 Aligned_cols=188 Identities=11% Similarity=-0.093 Sum_probs=138.9
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhC-----CCCEEEEec
Q 015570 15 VEMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVS 85 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~a-----gVkrfI~vS 85 (404)
...++++.+|+.+.+.+...++ ++|+|||||+..... ..++......|+.++.+++++++.. ...++++.|
T Consensus 55 ~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~s 134 (339)
T d1n7ha_ 55 KALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG 134 (339)
T ss_dssp -CCEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred ccceEEEEccccCHHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecc
Confidence 4678899999999999998885 789999999875322 1234456788999999999998753 344778888
Q ss_pred cCcccCCC----CchhhcccchHHHHHHHHHHHHHHH----CCCCEEEEEcCccCCCCCCccC---------------cc
Q 015570 86 SLGTNKFG----FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------TH 142 (404)
Q Consensus 86 S~gv~~~~----~~~~~~~~~~~y~~sK~~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~---------------~~ 142 (404)
+..++... .+.....+.+.|+.+|..+|+++.. .+|++++||++.+||+...... ..
T Consensus 135 s~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~ 214 (339)
T d1n7ha_ 135 SSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQ 214 (339)
T ss_dssp EGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSC
T ss_pred cceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCC
Confidence 77664432 2233456778999999999998854 6899999999999998543211 11
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
...+.+++...+++++++|+++++..++++.. ...+++..+.. .++.++++.+....|..
T Consensus 215 ~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~---~~~~~~~~~~~---~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 215 TKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK---PDDYVVATEEG---HTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp CCEEESCTTCEEECEEHHHHHHHHHHHHTSSS---CCEEEECCSCE---EEHHHHHHHHHHHTTCC
T ss_pred CeEEeCCCCccccceeeehHHHHHHHHHhcCC---CCccccccccc---cccchhhhhhhhhhhcc
Confidence 22334455566779999999999999999876 34555665554 88888888888887743
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.49 E-value=1e-14 Score=135.59 Aligned_cols=175 Identities=15% Similarity=0.152 Sum_probs=135.0
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCCCc
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 95 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~~~ 95 (404)
.+++++.+|+.+...+..++.+++.|||+++... ..+..++++++..++++++++.|+.+.......
T Consensus 55 ~~~~~~~~d~~~~~~~~~~~~~~~~vi~~~~~~~-------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~ 121 (307)
T d1qyca_ 55 SGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQ-------------IESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH 121 (307)
T ss_dssp TTCEEECCCTTCHHHHHHHHHTCSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCC
T ss_pred CCcEEEEeecccchhhhhhhhhceeeeecccccc-------------cchhhHHHHHHHHhccccceeeecccccccccc
Confidence 5789999999999999999999999999997542 345678899999999999999998766433221
Q ss_pred hhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCc--------cCcccEEEccCCccccCcccHHHHHHHHH
Q 015570 96 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY--------KETHNITLSQEDTLFGGQVSNLQVAELLA 167 (404)
Q Consensus 96 ~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~--------~~~~~i~~~~~~~~~~~~Is~~DVA~ai~ 167 (404)
.......+...+...+.++++.+++|+++|++++||..... .....+.+...+...+.+|+++|||++++
T Consensus 122 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 199 (307)
T d1qyca_ 122 --AVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 199 (307)
T ss_dssp --CCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred --ccccccccccccccccchhhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHH
Confidence 22334567788899999999999999999999999853321 11233444555566678999999999999
Q ss_pred HHHhCCCCCCCcE-EEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 168 CMAKNRSLSYCKV-VEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 168 ~~l~~~~~~~~~i-~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
.+++++.. .++. |++++++. +++.|+++.+.+.+|...
T Consensus 200 ~~l~~~~~-~~~~~~~~~~~~~---~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 200 KAVDDPRT-LNKTLYLRLPANT---LSLNELVALWEKKIDKTL 238 (307)
T ss_dssp TTSSCGGG-TTEEEECCCGGGE---EEHHHHHHHHHHHTTSCC
T ss_pred HHhcChhh-cCceeEEeCCCCc---cCHHHHHHHHHHHHCCCC
Confidence 99988773 4554 55566654 899999999999998653
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.43 E-value=1.1e-13 Score=128.26 Aligned_cols=184 Identities=14% Similarity=0.131 Sum_probs=137.8
Q ss_pred CCeEEEEc-----CCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 015570 16 EMLELVEC-----DLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 86 (404)
Q Consensus 16 ~gveiV~g-----Dl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS 86 (404)
.|.+++.. |+.|.+.+.++|+ +.|+||||++..... ..........|+....++.+++...+. +++++|+
T Consensus 24 ~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss 102 (281)
T d1vl0a_ 24 KNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 102 (281)
T ss_dssp SSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccccc-ccccccc
Confidence 45666665 5678888898887 679999999876421 122233456677788888888877765 6777777
Q ss_pred CcccCCC-----CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCccC--------cccEEEccCCccc
Q 015570 87 LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLF 153 (404)
Q Consensus 87 ~gv~~~~-----~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~~--------~~~i~~~~~~~~~ 153 (404)
..++... .+.+...+...|+..|...|+++++.+++++++|++++||++..... ...+.+.. ...
T Consensus 103 ~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~--~~~ 180 (281)
T d1vl0a_ 103 DYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQV 180 (281)
T ss_dssp GGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--SCE
T ss_pred ceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCccccceeEEeCCCcccccchhhhhccCCceeecC--Cce
Confidence 7664332 22334566778999999999999999999999999999998764311 11222222 355
Q ss_pred cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCC
Q 015570 154 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 208 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~ 208 (404)
+.+++++|+++++..++++.. .++||+++++. +++.|+++.+.+..|..
T Consensus 181 ~~~i~v~D~~~~~~~~~~~~~---~g~~~~~~~~~---~s~~e~~~~i~~~~g~~ 229 (281)
T d1vl0a_ 181 GTPTSTVDLARVVLKVIDEKN---YGTFHCTCKGI---CSWYDFAVEIFRLTGID 229 (281)
T ss_dssp ECCEEHHHHHHHHHHHHHHTC---CEEEECCCBSC---EEHHHHHHHHHHHHCCC
T ss_pred eccchhhhhhhhhhhhhhhcc---cCceeEeCCCc---cchHHHHHHHHHHhCCC
Confidence 689999999999999998876 46999998885 99999999999999864
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.42 E-value=4.5e-13 Score=129.01 Aligned_cols=179 Identities=14% Similarity=0.025 Sum_probs=129.7
Q ss_pred CCCeEEEEcCCCCH-hhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC
Q 015570 15 VEMLELVECDLEKR-VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG 93 (404)
Q Consensus 15 ~~gveiV~gDl~d~-~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~ 93 (404)
..+++++++|+.|. +.+..++.++|++++...... ..++..+.+++++|+++|+.|+|++||.+.....
T Consensus 48 ~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~~~----------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~ 117 (350)
T d1xgka_ 48 IPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQA----------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117 (350)
T ss_dssp STTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTT----------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGT
T ss_pred cCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccccc----------chhhhhhhHHHHHHHHhCCCceEEEeeccccccC
Confidence 46899999999985 557788999999998875432 2467788999999999999888888887543221
Q ss_pred CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCCCCCCcc---------Ccc--cEEEccCCccccCcccH-HH
Q 015570 94 FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETH--NITLSQEDTLFGGQVSN-LQ 161 (404)
Q Consensus 94 ~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G~~~~~~---------~~~--~i~~~~~~~~~~~~Is~-~D 161 (404)
. ......|...|...|+++++.+++|+++|+++|++...... ..+ .+.....+.....+++. +|
T Consensus 118 ~----~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~D 193 (350)
T d1xgka_ 118 G----PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHD 193 (350)
T ss_dssp S----SCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHH
T ss_pred C----cccchhhhhhHHHHHHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHH
Confidence 1 11123466889999999999999999999999886422111 011 12222223333345665 89
Q ss_pred HHHHHHHHHhCC-CCCCCcEEEEEcCCCCCCccHHHHHHHcccccCCCCCC
Q 015570 162 VAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKES 211 (404)
Q Consensus 162 VA~ai~~~l~~~-~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~~~ 211 (404)
||++++.++.+. ....|++|++.++. +++.|+++.+.+++|++...
T Consensus 194 va~~v~~~l~~~~~~~~G~~~~~~g~~----~T~~eia~~l~~~~G~~v~~ 240 (350)
T d1xgka_ 194 VGPALLQIFKDGPQKWNGHRIALTFET----LSPVQVCAAFSRALNRRVTY 240 (350)
T ss_dssp HHHHHHHHHHHCHHHHTTCEEEECSEE----ECHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHhCChhhcCCeEEEEeCCc----CCHHHHHHHHHHHHCCcceE
Confidence 999999999754 33468899998864 99999999999999976443
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.32 E-value=7.7e-13 Score=123.03 Aligned_cols=179 Identities=12% Similarity=0.032 Sum_probs=125.9
Q ss_pred EcCCCCHhhHHHHhC--CCCEEEEcCcCCCC--CCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCcccCCC----
Q 015570 22 ECDLEKRVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---- 93 (404)
Q Consensus 22 ~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~--~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~~~~---- 93 (404)
.+|+.|.+.+.++++ ++|+||||||.... ...++...+..|+.++.+|++++++.++ +++++||..++...
T Consensus 37 ~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~ 115 (298)
T d1n2sa_ 37 CGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIP 115 (298)
T ss_dssp CCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCC
T ss_pred cCcCCCHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCC
Confidence 479999999999987 56999999987632 2334455678899999999999999886 67788887664332
Q ss_pred -CchhhcccchHHHHHHHHHHHHHHHCCCCEEEEEcCccCC-CCCCccC------cccEEEccCCccccCcccHHHHHHH
Q 015570 94 -FPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMER-PTDAYKE------THNITLSQEDTLFGGQVSNLQVAEL 165 (404)
Q Consensus 94 -~~~~~~~~~~~y~~sK~~~E~~l~~~gl~~tIlRpg~~~G-~~~~~~~------~~~i~~~~~~~~~~~~Is~~DVA~a 165 (404)
.+.....+.+.|+.+|..+|++++.....+.++|.+.+++ .+..... .....+...+.....+++..|++++
T Consensus 116 ~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 195 (298)
T d1n2sa_ 116 WQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADC 195 (298)
T ss_dssp BCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHH
T ss_pred CccccccCCCchHhhhhhhhhhhHHhhhcccccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHH
Confidence 1223455678999999999999998777778888777654 3222110 0111122222344568999999999
Q ss_pred HHHHHhC---CCCCCCcEEEEEcCCCCCCccHHHHHHHccccc
Q 015570 166 LACMAKN---RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 205 (404)
Q Consensus 166 i~~~l~~---~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~ 205 (404)
+..++.. .. ...++||+++++. .++.++++.+....
T Consensus 196 ~~~~i~~~~~~~-~~~~~~n~~~~~~---~~~~~~~~~i~~~~ 234 (298)
T d1n2sa_ 196 TAHAIRVALNKP-EVAGLYHLVAGGT---TTWHDYAALVFDEA 234 (298)
T ss_dssp HHHHHHHHHHCG-GGCEEEECCCBSC---EEHHHHHHHHHHHH
T ss_pred HHHHHhhhhccc-cccccccccCCCc---eecHHHHHHHHhhh
Confidence 9887752 22 3478999999875 77777777665544
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=7.6e-12 Score=116.46 Aligned_cols=165 Identities=11% Similarity=-0.000 Sum_probs=114.4
Q ss_pred CCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEeccCccc-CCCC----chhhcccchHHHHHHH
Q 015570 36 GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN-KFGF----PAAILNLFWGVLLWKR 110 (404)
Q Consensus 36 ~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vSS~gv~-~~~~----~~~~~~~~~~y~~sK~ 110 (404)
..+++|+|+++.......+.......++.++.++++++...+++.+ +.||..++ +... ......+...|+.+|.
T Consensus 67 ~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v-~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~ 145 (307)
T d1eq2a_ 67 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFL-YASSAATYGGRTSDFIESREYEKPLNVYGYSKF 145 (307)
T ss_dssp SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEE-EEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHH
T ss_pred cchhhhhhhccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc
Confidence 4789999999876554445555667889999999999999999754 55554443 2221 1223455678999999
Q ss_pred HHHHHHHH----CCCCEEEEEcCccCCCCCCccCc--------------c-c-EEEccCCccccCcccHHHHHHHHHHHH
Q 015570 111 KAEEALIA----SGLPYTIVRPGGMERPTDAYKET--------------H-N-ITLSQEDTLFGGQVSNLQVAELLACMA 170 (404)
Q Consensus 111 ~~E~~l~~----~gl~~tIlRpg~~~G~~~~~~~~--------------~-~-i~~~~~~~~~~~~Is~~DVA~ai~~~l 170 (404)
.+|.+++. .+++++++|++.+||++...... + . ....+++...+.+++++|+++++..++
T Consensus 146 ~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~ 225 (307)
T d1eq2a_ 146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (307)
T ss_dssp HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred hhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHh
Confidence 99999984 68999999999999986542210 1 1 122334445567999999999999999
Q ss_pred hCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccCC
Q 015570 171 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 207 (404)
Q Consensus 171 ~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~ 207 (404)
.+.. ++.|+++++.. .++.|+++.+....+.
T Consensus 226 ~~~~---~~~~~~~~~~~---~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 226 ENGV---SGIFNLGTGRA---ESFQAVADATLAYHKK 256 (307)
T ss_dssp HHCC---CEEEEESCSCC---BCHHHHHHHC------
T ss_pred hhcc---ccccccccccc---hhHHHHHHHHHHhcCC
Confidence 8765 67999998875 8999999999876654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.24 E-value=8.7e-12 Score=119.46 Aligned_cols=194 Identities=11% Similarity=0.038 Sum_probs=134.8
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC--CCCEEEEcCcCCCCC--CCCCCcchhhHHHHHHHHHHHHHhCCC-CEEEEeccCcc
Q 015570 15 VEMLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGT 89 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~--gvDvVI~~ag~~~~~--~~d~~~~~~vnv~~~~~Ll~Aa~~agV-krfI~vSS~gv 89 (404)
..+++++.+|++|.+.+.+++. ..|+|||+++..... ..++...+.+|+.++.++++++.+.+. +++++.|+..+
T Consensus 55 ~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~ 134 (356)
T d1rkxa_ 55 ADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKC 134 (356)
T ss_dssp TTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGG
T ss_pred ccCCeEEEeeccChHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccc
Confidence 3689999999999999999886 679999999875321 234455678899999999999998654 45555555444
Q ss_pred cCCCC------chhhcccchHHHHHHHHHHHHHHH-------------CCCCEEEEEcCccCCCCCCccC----------
Q 015570 90 NKFGF------PAAILNLFWGVLLWKRKAEEALIA-------------SGLPYTIVRPGGMERPTDAYKE---------- 140 (404)
Q Consensus 90 ~~~~~------~~~~~~~~~~y~~sK~~~E~~l~~-------------~gl~~tIlRpg~~~G~~~~~~~---------- 140 (404)
+.... ......+...|+..|...|..+.. .++.++++|++.+||+.+....
T Consensus 135 ~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~ 214 (356)
T d1rkxa_ 135 YDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAF 214 (356)
T ss_dssp BCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHH
T ss_pred ccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHH
Confidence 32211 122445677899999999877752 4788999999999998653211
Q ss_pred -cccEEEccCCccccCcccHHHHHHHHHHHHhCCCC---CCCcEEEEEcCCCCCCccHHHHHHHcccccCCCC
Q 015570 141 -THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL---SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 209 (404)
Q Consensus 141 -~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~---~~~~i~nI~~~~~~~~~si~ell~~i~~~~g~~~ 209 (404)
.+...+...+...+.++++.|+++++..++.+... ..+...++... .....++.+++..+.+..|...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~ 286 (356)
T d1rkxa_ 215 EQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN-DADATPVKNIVEQMVKYWGEGA 286 (356)
T ss_dssp HTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC-GGGCEEHHHHHHHHHHHHCTTC
T ss_pred hCCCceEEeeccccccccccccccchhhhhhhhhcccccccccccccccc-cccccccchhhhhhHHHhCCCc
Confidence 12233444455556789999999999888865321 12233333221 1234899999999999988543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.88 E-value=1.9e-09 Score=98.50 Aligned_cols=170 Identities=14% Similarity=0.050 Sum_probs=112.5
Q ss_pred CCCCCCCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHH----HH
Q 015570 11 GIQPVEMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVD----AA 73 (404)
Q Consensus 11 ~~~~~~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~----Aa 73 (404)
......++..+++|++|.+++.+++ .++|++||+||..... ..+|...+++|+.+...+++ .+
T Consensus 40 ~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 119 (237)
T d1uzma1 40 GSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSM 119 (237)
T ss_dssp SSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcc
Confidence 3445567889999999998877664 3799999999976322 12344457788877766555 45
Q ss_pred HhCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEE
Q 015570 74 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL 146 (404)
Q Consensus 74 ~~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~ 146 (404)
++.+-.++|++||....... .....|..+|..++.+.+. .|+.+..|.||++..+............
T Consensus 120 ~~~~~g~Iv~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~ 193 (237)
T d1uzma1 120 QRNKFGRMIFIGSVSGLWGI------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQG 193 (237)
T ss_dssp HHTTCEEEEEECCCCC-----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHH
T ss_pred cccCCCceEEEcchhhccCC------cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHH
Confidence 56676799999998764322 1246799999999888763 6899999999999653211000000001
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.......+.+...+|||+++++++.+. .+.-|+++.+-++
T Consensus 194 ~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 194 ALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp HGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 111122344678999999999999654 3345788887766
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.84 E-value=1.4e-08 Score=93.13 Aligned_cols=161 Identities=17% Similarity=0.149 Sum_probs=113.8
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+++++ ++.+-
T Consensus 52 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~ 131 (244)
T d1nffa_ 52 DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR 131 (244)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCc
Confidence 46789999999998877665 47999999999864321 234445678888888777654 34455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.++|++||....... ..+..|+.+|..++.+.+. .|+.+..|.||++..+........ ....
T Consensus 132 G~Ii~isS~~~~~~~------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~ 200 (244)
T d1nffa_ 132 GSIINISSIEGLAGT------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-----IFQT 200 (244)
T ss_dssp EEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-----CSCC
T ss_pred ceEEecccccccccc------ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-----HHhc
Confidence 689999998764432 2246899999999988863 689999999999975432211111 1112
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.++.+...+|||+++++++.+. .+.-|+++.|-++.
T Consensus 201 pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 201 ALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT 237 (244)
T ss_dssp SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence 3345789999999999999654 33457888887764
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.82 E-value=4.4e-09 Score=96.79 Aligned_cols=165 Identities=11% Similarity=0.029 Sum_probs=110.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.+|++|.+++.+++ .++|++||++|...... .+|...+++|+.+...+++++ ++.+-
T Consensus 59 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~ 138 (251)
T d2c07a1 59 YESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRY 138 (251)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCC
Confidence 46899999999998877665 48999999999864321 233444677877777666654 45565
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.++|++||....... .....|..+|..++.+.+. .|+.+..|.||++..+.................
T Consensus 139 G~IVnisS~~~~~~~------~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~ 212 (251)
T d2c07a1 139 GRIINISSIVGLTGN------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNI 212 (251)
T ss_dssp EEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTC
T ss_pred eEEEEECCHHhcCCC------CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcC
Confidence 699999998764322 1235799999999988863 689999999999975432211111111111222
Q ss_pred cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
..+.+...+|||++++.++.+.. +.-|+++.|-++
T Consensus 213 pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 213 PAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 33456789999999999996543 335778877666
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=2.9e-09 Score=97.62 Aligned_cols=166 Identities=12% Similarity=0.066 Sum_probs=112.2
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+++++ ++.+-
T Consensus 50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~ 129 (243)
T d1q7ba_ 50 ANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH 129 (243)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC
Confidence 35788999999998877665 37999999998864321 233445678888887777765 44455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+.................
T Consensus 130 G~II~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 203 (243)
T d1q7ba_ 130 GRIITIGSVVGTMGN------GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQV 203 (243)
T ss_dssp EEEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTC
T ss_pred CEeeeecchhhcCCC------CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcC
Confidence 689999998664322 1236799999999988863 689999999999864321100000000111122
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+.+...+|||+++++++.+. .+.-|+++.|-++-
T Consensus 204 pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 204 PAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence 3345679999999999999654 33457888887763
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.78 E-value=1.9e-08 Score=92.19 Aligned_cols=166 Identities=13% Similarity=0.058 Sum_probs=109.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+++++ ++.+-
T Consensus 52 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~ 131 (247)
T d2ew8a1 52 RRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGW 131 (247)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCC
Confidence 57889999999998887664 48999999999864321 234455678888777776655 44555
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cccEE-EccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~i~-~~~~ 149 (404)
.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+...... ..... ....
T Consensus 132 G~Iv~isS~~~~~~~------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 205 (247)
T d2ew8a1 132 GRIINLTSTTYWLKI------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNM 205 (247)
T ss_dssp EEEEEECCGGGGSCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CT
T ss_pred CCccccccchhcccC------cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHH
Confidence 699999998764332 2246799999999887763 6899999999998654321110 00111 1111
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+...+|||++++.++.+. .+.-|+++.|-++-
T Consensus 206 ~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 206 LQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp TSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred hccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCE
Confidence 112334668899999999999654 33457888877763
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.77 E-value=3.8e-09 Score=96.89 Aligned_cols=165 Identities=13% Similarity=0.015 Sum_probs=111.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.+|++|.+++.+++ .++|++||+||..... ..+|...+++|+.+...+++++ ++.+-
T Consensus 51 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~ 130 (244)
T d1edoa_ 51 GQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK 130 (244)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC
Confidence 46789999999998887664 4799999999986432 1234445678888877776655 44455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.++|++||....... .....|..+|..++.+.+. .|+.+..|.||++..+.................
T Consensus 131 G~IVnisS~~~~~~~------~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 204 (244)
T d1edoa_ 131 GRIINIASVVGLIGN------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTI 204 (244)
T ss_dssp EEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSC
T ss_pred cEEEEEcChhhcCCC------CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcC
Confidence 699999998764321 1236799999999888863 689999999999864311110000011111222
Q ss_pred cccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEEcC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAE 186 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~~~ 186 (404)
..+.+...+|||+++++++..+ .+.-|+++.+-++
T Consensus 205 pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 205 PLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp TTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCC
Confidence 3345679999999999986433 3335778877766
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.76 E-value=1.5e-08 Score=92.64 Aligned_cols=165 Identities=15% Similarity=0.034 Sum_probs=111.2
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHh----CCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~----agV 78 (404)
-+++.+.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+++++.. .+-
T Consensus 49 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~ 128 (242)
T d1ulsa_ 49 VGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNP 128 (242)
T ss_dssp TTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccccc
Confidence 36788999999998887665 37999999999864321 23445578888888887776643 455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.+++++|+.+.... ..+..|+.+|..++.+.+. .|+.+..|.||++..+.................
T Consensus 129 ~~i~~~ss~~~~~~-------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~ 201 (242)
T d1ulsa_ 129 GSIVLTASRVYLGN-------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAAT 201 (242)
T ss_dssp EEEEEECCGGGGCC-------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTC
T ss_pred ceeeeeccccccCC-------CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcC
Confidence 57777777543322 1246799999999888763 689999999999975432211111111111122
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+.+...+|||+++++++.+. .+.-|+++.|-++.
T Consensus 202 pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 238 (242)
T d1ulsa_ 202 PLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR 238 (242)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCc
Confidence 3344678999999999999654 33457888887774
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.75 E-value=1.7e-08 Score=92.96 Aligned_cols=167 Identities=13% Similarity=-0.021 Sum_probs=111.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++.++.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+++++ ++.+-
T Consensus 51 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~ 130 (254)
T d1hdca_ 51 DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGG 130 (254)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCC
Confidence 46889999999998887665 48999999999864321 233445678888877777655 44455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+.................
T Consensus 131 G~II~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~ 204 (254)
T d1hdca_ 131 GSIVNISSAAGLMGL------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNT 204 (254)
T ss_dssp EEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTS
T ss_pred Ceecccccchhcccc------cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCC
Confidence 699999998764432 2246899999999888763 689999999999864211100000000000111
Q ss_pred cccCc-ccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 152 LFGGQ-VSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 152 ~~~~~-Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
.++.+ +..+|||++++.++.+. .+.-|+++.|-++-+
T Consensus 205 pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t 243 (254)
T d1hdca_ 205 PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence 11222 35799999999999654 334578888888754
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.73 E-value=2.6e-08 Score=91.44 Aligned_cols=165 Identities=12% Similarity=0.006 Sum_probs=111.3
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
+.+.+.+|++|.+++++++ .++|++||+||...... .+|...+++|+.+..++++++ ++.+-.
T Consensus 49 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 128 (248)
T d2d1ya1 49 GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG 128 (248)
T ss_dssp TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE
T ss_pred CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccc
Confidence 5678999999998877654 48999999999864321 223445678888887776665 445556
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc--c----CcccEEE
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--K----ETHNITL 146 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~--~----~~~~i~~ 146 (404)
++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+.... . .......
T Consensus 129 ~Ii~isS~~~~~~~------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~ 202 (248)
T d2d1ya1 129 AIVNVASVQGLFAE------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRD 202 (248)
T ss_dssp EEEEECCGGGTSBC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHH
T ss_pred cccccccccccccc------cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHH
Confidence 99999998764432 2346899999999987763 68999999999986431100 0 0000011
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
......++.+...+|||++++.++.+. .+.-|+++.|-++-
T Consensus 203 ~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 244 (248)
T d2d1ya1 203 WEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGM 244 (248)
T ss_dssp HHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCc
Confidence 112223345678999999999999654 33457888887764
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.71 E-value=2.9e-08 Score=91.53 Aligned_cols=165 Identities=13% Similarity=0.050 Sum_probs=109.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.+|++|.+++.+++ .++|++||+||..... ..+|...+++|+.+...+++++ ++.+-
T Consensus 55 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~ 134 (260)
T d1x1ta1 55 VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGF 134 (260)
T ss_dssp SCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCC
Confidence 46889999999998887665 3799999999986332 1234445678877776665544 55555
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-----ccE--
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HNI-- 144 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-----~~i-- 144 (404)
.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+....... ..+
T Consensus 135 G~Iv~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 208 (260)
T d1x1ta1 135 GRIINIASAHGLVAS------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQ 208 (260)
T ss_dssp EEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------
T ss_pred ceEeecccccceecc------CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCCh
Confidence 699999998764432 2246799999999888763 68999999999986432211000 000
Q ss_pred -----EEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 145 -----TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 145 -----~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.........+.+...+|||+++++++.+. .+.-|+++.|-++
T Consensus 209 ~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 209 ETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp ------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 00001112234678999999999999654 3345778887776
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.70 E-value=1.5e-08 Score=93.15 Aligned_cols=166 Identities=11% Similarity=0.131 Sum_probs=111.7
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.+|++|.+++.+++ .++|++||+||..... ..+|...+++|+.+...+++++ ++.+-
T Consensus 55 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~ 134 (251)
T d1vl8a_ 55 VETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN 134 (251)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSS
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccc
Confidence 46788999999998877665 4799999999976332 1233445678888877776665 34555
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~~ 149 (404)
.++|+++|........ ..+..|+.+|..++.+.+. .|+.+..|.||++..+..... ..........
T Consensus 135 G~Ii~i~S~~~~~~~~-----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 209 (251)
T d1vl8a_ 135 PSIINIGSLTVEEVTM-----PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLK 209 (251)
T ss_dssp CEEEEECCGGGTCCCS-----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHH
T ss_pred ccccccccchhccccC-----ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHh
Confidence 6999999875543221 1235799999999888763 689999999999965432210 0001111111
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
...++.+...+|||++++.++.+.. +.-|+++.|-++
T Consensus 210 ~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG 247 (251)
T d1vl8a_ 210 RIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG 247 (251)
T ss_dssp TCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCCCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence 2233446788999999999986543 335778887766
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.70 E-value=5.6e-08 Score=88.67 Aligned_cols=144 Identities=13% Similarity=0.094 Sum_probs=102.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.+|++|.+++.+++ .++|++||++|..... ..+|...+++|+.+...+++++ ++.+-
T Consensus 57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~ 136 (240)
T d2bd0a1 57 ALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS 136 (240)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCC
Confidence 46788999999998877654 3799999999986432 1233445678888777766655 44455
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 151 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~ 151 (404)
.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+.... ..+.
T Consensus 137 G~Ii~isS~~~~~~~------~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------~~~~ 201 (240)
T d2bd0a1 137 GHIFFITSVAATKAF------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------VDDE 201 (240)
T ss_dssp EEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------CCST
T ss_pred CceEEEechhhcCCC------CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------cCHh
Confidence 699999998765432 2246799999988877763 68999999999986442210 0111
Q ss_pred cccCcccHHHHHHHHHHHHhCCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
....+...+|||+++++++.++.
T Consensus 202 ~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 202 MQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred hHhcCCCHHHHHHHHHHHHcCCc
Confidence 22235688999999999998765
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.69 E-value=3.9e-08 Score=90.29 Aligned_cols=166 Identities=11% Similarity=0.029 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 15 VEMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
..++.++.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+++++. +.+
T Consensus 53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~ 132 (251)
T d1zk4a1 53 PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG 132 (251)
T ss_dssp TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC
Confidence 357999999999998877654 48999999999864321 2233456788888888777653 445
Q ss_pred CC-EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---------HCCCCEEEEEcCccCCCCCCc-cCcccEEE
Q 015570 78 VN-HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAY-KETHNITL 146 (404)
Q Consensus 78 Vk-rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---------~~gl~~tIlRpg~~~G~~~~~-~~~~~i~~ 146 (404)
.. ++|++||....... ..+..|..+|..++.+.+ ..|+.+..|.||++..+.... ........
T Consensus 133 ~gg~Ii~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~ 206 (251)
T d1zk4a1 133 LGASIINMSSIEGFVGD------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMS 206 (251)
T ss_dssp SCEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHT
T ss_pred CCCceEeeeccceeccC------CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHH
Confidence 44 78999998664322 124679999988876554 247999999999996432110 00000111
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.......+.+...+|||+++++++.+.. +.-|+++.|-++
T Consensus 207 ~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 207 QRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp STTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence 1112233456799999999999996543 335778887776
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=5.1e-08 Score=89.12 Aligned_cols=165 Identities=12% Similarity=0.069 Sum_probs=112.2
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH-----hCCCCEE
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT-----IAKVNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~-----~agVkrf 81 (404)
.+++.+.+|+.|.++++++++ ++|++||+||...... .+|...+++|+.+...+.+++. +.+-.++
T Consensus 52 ~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~I 131 (244)
T d1pr9a_ 52 PGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAI 131 (244)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceE
Confidence 468899999999999888765 7899999999864321 2334446778777777666543 3344689
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc--cCcccEEEccCCcc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETHNITLSQEDTL 152 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~--~~~~~i~~~~~~~~ 152 (404)
|++||....... .....|+.+|..++.+.+. .|+.+..|.||++..+.... ..............
T Consensus 132 i~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p 205 (244)
T d1pr9a_ 132 VNVSSQCSQRAV------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP 205 (244)
T ss_dssp EEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCT
T ss_pred eecccccccccc------cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCC
Confidence 999998764432 2246799999999988763 68999999999986532110 00011111112223
Q ss_pred ccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 153 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.+.+...+|||++++.++.+. .+.-|+++.|-++
T Consensus 206 l~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 206 LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence 345789999999999999654 3345778877766
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=2.4e-08 Score=91.74 Aligned_cols=165 Identities=14% Similarity=0.097 Sum_probs=111.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC----C---CCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE----V---FDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~----~---~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
.++..+.+|++|.+++++++ .++|++||+||..... . .+|...+++|+.+..++++++. +.+
T Consensus 51 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 130 (250)
T d1ydea1 51 PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ 130 (250)
T ss_dssp TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC
Confidence 56889999999998877665 3799999999965221 1 2234456788888877777554 333
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC-----c-cCcccE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-----Y-KETHNI 144 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~-----~-~~~~~i 144 (404)
.++|++||....... .....|..+|..++.+.+. .|+.+..|.||++..+... . .....+
T Consensus 131 -G~Ii~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 203 (250)
T d1ydea1 131 -GNVINISSLVGAIGQ------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASI 203 (250)
T ss_dssp -CEEEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHH
T ss_pred -CCCcccccccccccc------cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHH
Confidence 589999998764322 2246899999999888763 6899999999998532110 0 000011
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
........++.+...+|||++++.++.+..+.-|+++.|-++-
T Consensus 204 ~~~~~~~pl~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~ 246 (250)
T d1ydea1 204 REGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGA 246 (250)
T ss_dssp HHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTT
T ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHhCccCCCcCCeEEECCCc
Confidence 1111112334567999999999999865454567888887774
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.64 E-value=3.8e-08 Score=90.92 Aligned_cols=166 Identities=14% Similarity=0.060 Sum_probs=111.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+++++ ++.+.
T Consensus 57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~ 136 (261)
T d1geea_ 57 GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI 136 (261)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc
Confidence 46789999999998877665 48999999999864321 233445678877777766554 44443
Q ss_pred -CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--CcccEEEcc
Q 015570 79 -NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQ 148 (404)
Q Consensus 79 -krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~~~i~~~~ 148 (404)
.++|++||.+..... ..+..|..+|..++.+.+. .|+.+..|.||++..+..... .........
T Consensus 137 g~~Iv~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~ 210 (261)
T d1geea_ 137 KGTVINMSSVHEKIPW------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVE 210 (261)
T ss_dssp CCEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHH
T ss_pred cccccccccchhcccC------ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHH
Confidence 368889988664322 2246799999999888763 689999999999965422110 000001111
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.....+.+...+|||++++.++.+.. +.-|+++.|-++.
T Consensus 211 ~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 250 (261)
T d1geea_ 211 SMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGM 250 (261)
T ss_dssp TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence 12233446789999999999996543 3457888887774
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.64 E-value=4.9e-08 Score=90.01 Aligned_cols=167 Identities=12% Similarity=0.060 Sum_probs=113.2
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-C------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++..+.+|++|.+++.+++ .++|++||+||.... . ..+|...+++|+.+...+++++ ++.+
T Consensus 55 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 134 (258)
T d1iy8a_ 55 AEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG 134 (258)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc
Confidence 47889999999998887664 489999999996521 1 1234455678888888877765 3345
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-------cCcc-
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-------KETH- 142 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-------~~~~- 142 (404)
-.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+.... ....
T Consensus 135 ~G~Ii~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~ 208 (258)
T d1iy8a_ 135 SGMVVNTASVGGIRGI------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRK 208 (258)
T ss_dssp CCEEEEECCGGGTSBC------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHH
T ss_pred CCCCcccccHhhccCC------CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHH
Confidence 5689999998764321 2246899999999877763 68999999999986431100 0000
Q ss_pred cEEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 143 NITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 143 ~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
...........+.+...+|||++++.++.+. .+.-|+++.|-++.+
T Consensus 209 ~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 209 AAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp HHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 0001111223345678999999999999654 334578888887754
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.64 E-value=7.5e-08 Score=89.05 Aligned_cols=169 Identities=15% Similarity=0.147 Sum_probs=112.6
Q ss_pred CCCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC--------CCCCcchhhHHHHHHHHHHHH----Hh
Q 015570 15 VEMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAA----TI 75 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~--------~d~~~~~~vnv~~~~~Ll~Aa----~~ 75 (404)
..++.++.+|++|.+++.+++ ..+|++||++|...... .+|...+++|+.+...+++++ .+
T Consensus 53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 132 (268)
T d2bgka1 53 PDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIP 132 (268)
T ss_dssp TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGG
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhh
Confidence 356889999999998887765 38999999999753221 123334577877777766655 34
Q ss_pred CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-C--cccE-
Q 015570 76 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-E--THNI- 144 (404)
Q Consensus 76 agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~--~~~i- 144 (404)
.+-.++|++||........ .....|..+|..++.+.+. .|+.+..|.||++..+..... . ....
T Consensus 133 ~~~g~ii~iss~~~~~~~~-----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~ 207 (268)
T d2bgka1 133 AKKGSIVFTASISSFTAGE-----GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVE 207 (268)
T ss_dssp GTCEEEEEECCGGGTCCCT-----TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHH
T ss_pred cCCCCcccccccccccccc-----ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHH
Confidence 4556899999876543321 1224689999999988863 689999999999876432110 0 0000
Q ss_pred E-EccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCCC
Q 015570 145 T-LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT 188 (404)
Q Consensus 145 ~-~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~~ 188 (404)
. ........+.+...+|||+++++++.+. .+.-|+++.|-++-+
T Consensus 208 ~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t 253 (268)
T d2bgka1 208 ELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT 253 (268)
T ss_dssp HHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence 0 0011123345678999999999999654 334588888888754
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=4.8e-08 Score=89.88 Aligned_cols=166 Identities=10% Similarity=0.067 Sum_probs=112.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC-----CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~-----~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
.++..+.+|++|.+++.+++ .++|++||++|...... .+|...+++|+.+...+++++ ++.+-.
T Consensus 60 ~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g 139 (255)
T d1fmca_ 60 GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG 139 (255)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccccc
Confidence 46889999999998877654 48999999999864322 223445678888877776655 344555
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-cCcccEEEccCCc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KETHNITLSQEDT 151 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~~~~~i~~~~~~~ 151 (404)
++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+.... .............
T Consensus 140 ~Ii~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~ 213 (255)
T d1fmca_ 140 VILTITSMAAENKN------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT 213 (255)
T ss_dssp EEEEECCGGGTCCC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTC
T ss_pred ccccccccchhccc------cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcC
Confidence 88999998664432 2246899999999888763 68999999999986432110 0000000111122
Q ss_pred cccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 152 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 152 ~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
..+.+...+|||++++.++.+. .+.-|+++.|-++.
T Consensus 214 pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 214 PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence 3344678999999999999654 33457888887775
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.62 E-value=2.8e-08 Score=90.82 Aligned_cols=166 Identities=12% Similarity=-0.003 Sum_probs=112.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhC---CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH-----hCCCCEE
Q 015570 16 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT-----IAKVNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~---gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~-----~agVkrf 81 (404)
.+++.+.+|++|.++++++++ ++|++||+||..... ..+|...+++|+.+...+.+++. +.+-.++
T Consensus 50 ~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~i 129 (242)
T d1cyda_ 50 PGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSI 129 (242)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcc
Confidence 578899999999999988875 789999999976432 12234456788888888776543 2233589
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc-cCc-ccEEEccCCcc
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KET-HNITLSQEDTL 152 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~-~~~-~~i~~~~~~~~ 152 (404)
|++||....... ..+..|+.+|..++.+.+. .|+.+..|.||++..+.... ... ...........
T Consensus 130 i~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p 203 (242)
T d1cyda_ 130 VNVSSMVAHVTF------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP 203 (242)
T ss_dssp EEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST
T ss_pred cccchhhccccC------CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCC
Confidence 999998664432 2246799999999988873 68999999999996432110 000 00000011122
Q ss_pred ccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 153 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 153 ~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.+.+...+|||++++.++.+. .+.-|+++.|-++-
T Consensus 204 l~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 204 LRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 239 (242)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcch
Confidence 345678999999999999654 33457888877763
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.61 E-value=3.6e-08 Score=90.69 Aligned_cols=165 Identities=15% Similarity=0.094 Sum_probs=112.8
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHHh------C
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI------A 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~~------a 76 (404)
.++..+.+|++|.+++.+++ .++|++||+||..... ..+|...+++|+.+...+++++.. .
T Consensus 51 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~ 130 (257)
T d2rhca1 51 VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER 130 (257)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH
T ss_pred CcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc
Confidence 46899999999998887665 3799999999986332 123445578899999999887743 3
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc---------C
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK---------E 140 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~---------~ 140 (404)
+..++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+..... .
T Consensus 131 ~~g~Ii~i~S~~~~~~~------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 204 (257)
T d2rhca1 131 GTGRIVNIASTGGKQGV------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEV 204 (257)
T ss_dssp TEEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTC
T ss_pred CCccccccccccccccc------ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhccc
Confidence 44589999888664332 1246799999999988863 579999999999854211000 0
Q ss_pred --cccEEEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 141 --THNITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 141 --~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
...+.........+.+...+|||++++.++.+. .+.-|+++.|-++
T Consensus 205 ~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 205 STEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp CHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 000011112223345679999999999999654 3345778887766
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.61 E-value=6.2e-08 Score=89.05 Aligned_cols=166 Identities=16% Similarity=0.043 Sum_probs=111.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCC-
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~ag- 77 (404)
.++..+.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+..++++++. +.+
T Consensus 50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~ 129 (255)
T d1gega_ 50 GHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH 129 (255)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred CcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc
Confidence 46889999999998877654 47999999999864321 2344456788888888877643 333
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----C-----
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----E----- 140 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-----~----- 140 (404)
-.++|++||....... .....|..+|..++.+.+. .|+.+..|.||++..+..... .
T Consensus 130 ~g~Iv~isS~~~~~~~------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 203 (255)
T d1gega_ 130 GGKIINACSQAGHVGN------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKP 203 (255)
T ss_dssp CEEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCC
T ss_pred ccccccccchhhcccC------cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhccc
Confidence 3578999988764332 2246799999999888763 689999999999854211000 0
Q ss_pred -cccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 141 -THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 141 -~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.............+.+...+|||++++.++.+.. +.-|+++.|-++-
T Consensus 204 ~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~ 252 (255)
T d1gega_ 204 LGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 252 (255)
T ss_dssp TTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred chhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence 0000001112233456789999999999996543 3357788877763
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.59 E-value=7.4e-08 Score=88.59 Aligned_cols=166 Identities=10% Similarity=0.067 Sum_probs=112.2
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH-----hCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT-----IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~-----~ag 77 (404)
.++..+.+|++|.+++.+++ .++|++||++|...... .+|...+++|+.+...+++++. +.+
T Consensus 51 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~ 130 (256)
T d1k2wa_ 51 PAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR 130 (256)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred CceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhcc
Confidence 56889999999998888665 47999999999764321 2344457888888888776532 223
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc---------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--------- 141 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~--------- 141 (404)
-.++|++||.+..... .....|..+|..++.+.+. .|+.+..|.||++..+.......
T Consensus 131 ~g~Iv~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 204 (256)
T d1k2wa_ 131 GGKIINMASQAGRRGE------ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLP 204 (256)
T ss_dssp CEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCC
T ss_pred CCccccccchhhcccc------ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCC
Confidence 4589999998765432 2246799999999988863 68999999999987543210000
Q ss_pred --ccEEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 142 --HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 142 --~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
............+.+...+|||++++.++.+.. +.-|+++.|-++.
T Consensus 205 ~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~ 253 (256)
T d1k2wa_ 205 RGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGN 253 (256)
T ss_dssp TTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcch
Confidence 000000011123446789999999999886543 3457888887775
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.59 E-value=1.3e-07 Score=86.50 Aligned_cols=171 Identities=16% Similarity=0.168 Sum_probs=113.7
Q ss_pred CCeEEEEcCCCCHhhHHHHhC------CCCEEEEcCcCCCCCCCC------CCcchhhHHHHHHHHHHHHHhCCCCEEEE
Q 015570 16 EMLELVECDLEKRVQIEPALG------NASVVICCIGASEKEVFD------ITGPYRIDFQATKNLVDAATIAKVNHFIM 83 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~------gvDvVI~~ag~~~~~~~d------~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~ 83 (404)
.+++++.+|++|.+++..+++ +.|.|||++|........ +...+..|+.+..+|.+++...+..+||+
T Consensus 62 ~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~ 141 (259)
T d2fr1a1 62 ARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVL 141 (259)
T ss_dssp CEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEE
T ss_pred ccccccccccchHHHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEee
Confidence 468899999999999887764 579999999987433211 22235789999999999998888889999
Q ss_pred eccCcccCCCCchhhcccchHHHHHHHHHHHHHH---HCCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHH
Q 015570 84 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL 160 (404)
Q Consensus 84 vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~ 160 (404)
+||....... .....|+.+|..++.+.+ ..|+.++.|.+|.+.+.+... ..+.-... ......+..+
T Consensus 142 ~SS~a~~~g~------~~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~---~~~~~~~~-~~G~~~~~~~ 211 (259)
T d2fr1a1 142 FSSFASAFGA------PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAE---GPVADRFR-RHGVIEMPPE 211 (259)
T ss_dssp EEEHHHHTCC------TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------CT-TTTEECBCHH
T ss_pred ecchhhccCC------cccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCcccc---chHHHHHH-hcCCCCCCHH
Confidence 9998653221 112458999988877665 479999999999987643321 11111111 1112357899
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEcCCCCCCccHHHHHHHcccccC
Q 015570 161 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 206 (404)
Q Consensus 161 DVA~ai~~~l~~~~~~~~~i~nI~~~~~~~~~si~ell~~i~~~~g 206 (404)
++++++..++.+... ..+ +.+ .+|..++..+...+.
T Consensus 212 ~~~~~l~~~l~~~~~--~~~---v~~-----~d~~~~~~~~~~~~p 247 (259)
T d2fr1a1 212 TACRALQNALDRAEV--CPI---VID-----VRWDRFLLAYTAQRP 247 (259)
T ss_dssp HHHHHHHHHHHTTCS--SCE---ECE-----ECHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHhCCCc--eEE---EEe-----CcHHHHHHhhhccCC
Confidence 999999999987652 111 222 567777766655443
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.59 E-value=8.3e-08 Score=88.46 Aligned_cols=166 Identities=15% Similarity=0.106 Sum_probs=99.4
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------C-CCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------G-NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~-gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++..+.+|++|.+++.+++ . .+|++||++|..... ..+|...+++|+.+...+++++ ++.+
T Consensus 57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 136 (259)
T d1xq1a_ 57 FQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG 136 (259)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc
Confidence 47899999999998776554 2 489999999976322 1234455688888887777655 4446
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~~ 149 (404)
-.++|++||....... .....|..+|..++.+.+. .|+.+..|.||++..+..... ..........
T Consensus 137 ~G~Iv~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 210 (259)
T d1xq1a_ 137 CGNIIFMSSIAGVVSA------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVIS 210 (259)
T ss_dssp SCEEEEEC----------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------
T ss_pred cccccccccccccccc------cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHh
Confidence 5699999998664321 1235799999999887763 689999999999865432111 0111111111
Q ss_pred CccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
....+.+...+|||++++.++.+. .+.-|+++.|-++-
T Consensus 211 ~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~ 249 (259)
T d1xq1a_ 211 RKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGL 249 (259)
T ss_dssp -------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred CCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCE
Confidence 222334668899999999999654 33357788776663
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.50 E-value=1.7e-07 Score=85.98 Aligned_cols=164 Identities=11% Similarity=0.084 Sum_probs=110.8
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHH----hCC---CCEE
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT----IAK---VNHF 81 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~----~ag---Vkrf 81 (404)
.++..+.+|++|.+++.+++ .++|++||+||.... .+|...+++|+.+..++.+++. +.+ -.++
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~I 131 (254)
T d2gdza1 54 QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGII 131 (254)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEE
T ss_pred CcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEE
Confidence 47889999999998877665 479999999998753 3567778888877776655553 322 2479
Q ss_pred EEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---------HCCCCEEEEEcCccCCCCCCc-cCcc---c---E-
Q 015570 82 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAY-KETH---N---I- 144 (404)
Q Consensus 82 I~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---------~~gl~~tIlRpg~~~G~~~~~-~~~~---~---i- 144 (404)
|++||....... ..+..|..+|..++.+.+ ..|+.+..|.||++..+.... .... . .
T Consensus 132 v~isS~~~~~~~------~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~ 205 (254)
T d2gdza1 132 INMSSLAGLMPV------AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK 205 (254)
T ss_dssp EEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGH
T ss_pred EeeccHhhccCC------CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHH
Confidence 999998764332 123579999988876543 368999999999985321110 0000 0 0
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCCC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 188 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~~ 188 (404)
........++.+...+|||++++.++.+.. .-|+++.|.++..
T Consensus 206 ~~~~~~~p~~r~~~pedvA~~v~fL~s~~~-itG~~i~VdGG~~ 248 (254)
T d2gdza1 206 DHIKDMIKYYGILDPPLIANGLITLIEDDA-LNGAIMKITTSKG 248 (254)
T ss_dssp HHHHHHHHHHCCBCHHHHHHHHHHHHHCTT-CSSCEEEEETTTE
T ss_pred HHHHhcCCCCCCcCHHHHHHHHHHHHcCCC-CCCCEEEECCCCe
Confidence 000001112346788999999999998754 5688999888864
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.49 E-value=2.1e-07 Score=87.41 Aligned_cols=166 Identities=11% Similarity=0.039 Sum_probs=110.2
Q ss_pred CCCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCC
Q 015570 15 VEMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK 77 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~ag 77 (404)
..++..+.+|++|.+++.+++ .++|++||+||..... ..+|...+++|+.+...+++++. +.+
T Consensus 65 ~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 144 (297)
T d1yxma1 65 QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH 144 (297)
T ss_dssp CCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred CceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc
Confidence 457899999999998877664 4899999999876322 12344456788888887777654 334
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc--Cc--ccEEE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ET--HNITL 146 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~--~~--~~i~~ 146 (404)
-.++|++|+.+.... .....|+.+|..++.+.+. .|+.+..|.||++..+..... .. ..+..
T Consensus 145 ~g~Ii~~ss~~~~~~-------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 217 (297)
T d1yxma1 145 GGSIVNIIVPTKAGF-------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEG 217 (297)
T ss_dssp CEEEEEECCCCTTCC-------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTT
T ss_pred ccccccccccccccc-------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHH
Confidence 457887776543322 1246789999999988763 589999999999975432110 00 00000
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.......+.+...+|||++++.++.+. .+.-|+++.|-++.
T Consensus 218 ~~~~~plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~ 259 (297)
T d1yxma1 218 SFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR 259 (297)
T ss_dssp GGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcCh
Confidence 011112334678899999999999654 33457888887774
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.48 E-value=1.4e-07 Score=86.84 Aligned_cols=165 Identities=13% Similarity=0.088 Sum_probs=110.5
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------C-CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------G-NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~-gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++..+.+|++|.+++.+++ . .+|++||++|...... .+|...+++|+.+...+.+++ ++.+
T Consensus 57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 136 (259)
T d2ae2a_ 57 FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE 136 (259)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS
T ss_pred CCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc
Confidence 56788999999998877554 2 4899999999764321 233445678888777766654 4455
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc--cC---cccEE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KE---THNIT 145 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~--~~---~~~i~ 145 (404)
-.++|++||....... .....|..+|..++.+.+. .|+.+..|.||++..+.... .. ...+.
T Consensus 137 ~G~Ii~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 210 (259)
T d2ae2a_ 137 RGNVVFISSVSGALAV------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLN 210 (259)
T ss_dssp SEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHH
T ss_pred cccccccccccccccc------ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHH
Confidence 5699999998664322 2246799999999888863 58999999999986432110 00 00011
Q ss_pred EccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 146 LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 146 ~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
........+.+...+|||++++.++.+.. +.-|+++.|-++
T Consensus 211 ~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 252 (259)
T d2ae2a_ 211 KLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 252 (259)
T ss_dssp HHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 11112233456789999999999997543 345778877766
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.48 E-value=8.5e-08 Score=88.38 Aligned_cols=165 Identities=10% Similarity=0.004 Sum_probs=108.4
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCC-C-C-----CCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-E-V-----FDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~-~-~-----~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
.++..+.+|++|.+++.+++ .++|++||++|.... . . .+|...+++|+.+...+++++ .+.+
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~ 133 (260)
T d1zema1 54 VEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN 133 (260)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc
Confidence 47889999999998877665 489999999997532 1 1 123344678888877776655 3345
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc------------
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY------------ 138 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~------------ 138 (404)
-.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+....
T Consensus 134 ~G~II~isS~~~~~~~------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~ 207 (260)
T d1zema1 134 YGRIVNTASMAGVKGP------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQ 207 (260)
T ss_dssp CEEEEEECCHHHHSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCT
T ss_pred CCCCCeeechhhccCC------cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhccc
Confidence 5699999998764332 2246799999999888763 68999999999986432100
Q ss_pred -cCc--cc-EEEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 139 -KET--HN-ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 139 -~~~--~~-i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
... .. ..........+.+...+|||+++++++.+.. +.-|+++.|-++
T Consensus 208 ~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 208 YFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp TSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred ccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 000 00 0000111223346788999999999997543 334677766543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.46 E-value=2.4e-07 Score=85.29 Aligned_cols=165 Identities=16% Similarity=0.087 Sum_probs=108.1
Q ss_pred CCeEEEEcCCCCHhhHHHHhC--------CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCC
Q 015570 16 EMLELVECDLEKRVQIEPALG--------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~--------gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~ag 77 (404)
..+.++.+|+.+.++++++++ ..|++||++|...... .+|...+++|+.+...+.+++ .+.+
T Consensus 55 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~ 134 (258)
T d1ae1a_ 55 LNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ 134 (258)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc
Confidence 567889999999988776542 4899999999864322 233344677777777666554 4456
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc------cE
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH------NI 144 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~------~i 144 (404)
..++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+........ .+
T Consensus 135 ~g~ii~isS~~~~~~~------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~ 208 (258)
T d1ae1a_ 135 NGNVIFLSSIAGFSAL------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEI 208 (258)
T ss_dssp SEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHH
T ss_pred cccccccccccccccc------ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHH
Confidence 6799999998774432 2246899999999988873 689999999999975422110000 00
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.........+.+...+|||++++.++.+. .+.-|+.+.|-++
T Consensus 209 ~~~~~~~plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG 251 (258)
T d1ae1a_ 209 DNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG 251 (258)
T ss_dssp HHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence 00000112244789999999999999644 3335777877666
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.46 E-value=4.3e-07 Score=83.58 Aligned_cols=166 Identities=14% Similarity=0.150 Sum_probs=103.5
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC----------CCCCCcchhhHHHHHHHHHHHHH----
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAAT---- 74 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~----------~~d~~~~~~vnv~~~~~Ll~Aa~---- 74 (404)
.++..+.+|++|.+++.+++ .++|++||++|..... ..+|...+++|+.+...+++++.
T Consensus 57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~ 136 (264)
T d1spxa_ 57 QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS 136 (264)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccc
Confidence 46899999999998877665 4799999999974211 12244456788888877766654
Q ss_pred hCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccE--
Q 015570 75 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-- 144 (404)
Q Consensus 75 ~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i-- 144 (404)
+.+ .++|+++|........ ..+..|..+|..++.+.+. .|+.+..|.||++..+....... ...
T Consensus 137 ~~~-g~iI~~~S~~~~~~~~-----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~ 210 (264)
T d1spxa_ 137 STK-GEIVNISSIASGLHAT-----PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSK 210 (264)
T ss_dssp HHT-CEEEEECCTTSSSSCC-----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC------------
T ss_pred ccc-CcceeeeeeccccccC-----CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHH
Confidence 333 3566666654322221 1235799999999888763 68999999999986432211000 000
Q ss_pred EE------ccCCccccCcccHHHHHHHHHHHHhC--CCCCCCcEEEEEcCC
Q 015570 145 TL------SQEDTLFGGQVSNLQVAELLACMAKN--RSLSYCKVVEVIAET 187 (404)
Q Consensus 145 ~~------~~~~~~~~~~Is~~DVA~ai~~~l~~--~~~~~~~i~nI~~~~ 187 (404)
.. .......+.+...+|||++++.++.+ ..+.-|+++.|-++.
T Consensus 211 ~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 211 KFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp --HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence 00 00111223467899999999999953 344457888877763
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.46 E-value=4.1e-07 Score=83.35 Aligned_cols=164 Identities=13% Similarity=0.079 Sum_probs=107.2
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----hCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~agV 78 (404)
.+..++.+|++|.+++.+++ .+.|++||+||...... .+|...+++|+.+...+++++. +.+
T Consensus 52 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~- 130 (253)
T d1hxha_ 52 ERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG- 130 (253)
T ss_dssp TTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-
T ss_pred CCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-
Confidence 46788999999998877654 47899999999864321 2234456788777777666553 334
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCc---c--CcccE
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAY---K--ETHNI 144 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~---~--~~~~i 144 (404)
.++|++||....... ..+..|..+|..++.+.+. .++.+..|.||++..+.... . ....+
T Consensus 131 G~Iv~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 204 (253)
T d1hxha_ 131 GSIINMASVSSWLPI------EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMV 204 (253)
T ss_dssp EEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHH
T ss_pred CceecccchhhhcCc------cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHH
Confidence 589999998764332 2246799999988877752 24888899999986431100 0 00001
Q ss_pred EEccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 145 TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 145 ~~~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
.........+.+...+|||+++++++.+. .+.-|+++.|-++
T Consensus 205 ~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 205 LHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp BCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred HhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 11111112234678899999999999654 3345788887666
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.44 E-value=2.7e-07 Score=85.61 Aligned_cols=166 Identities=14% Similarity=0.113 Sum_probs=109.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC--------CCCCcchhhHHHHHHHHHHHH----HhC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAA----TIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~--------~d~~~~~~vnv~~~~~Ll~Aa----~~a 76 (404)
.++..+.+|++|.+++.+++ .++|++||++|...... .+|...+++|+.+...+++++ ++.
T Consensus 56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 135 (274)
T d1xhla_ 56 EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT 135 (274)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc
Confidence 47899999999998877655 37899999999652211 123445677888777766655 345
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC---c--cc-
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---T--HN- 143 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~---~--~~- 143 (404)
+-.++|++|+.+..... ..+..|..+|..++.+.+. .|+.+..|.||++..+...... . ..
T Consensus 136 ~~g~ii~~ss~~~~~~~------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 209 (274)
T d1xhla_ 136 KGEIVNVSSIVAGPQAH------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKL 209 (274)
T ss_dssp TCEEEEECCGGGSSSCC------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHH
T ss_pred ccccccchhhhhccccC------CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHH
Confidence 55577777775543221 1235799999999888763 6899999999999643211000 0 00
Q ss_pred ---EEEccCCccccCcccHHHHHHHHHHHHhC--CCCCCCcEEEEEcCC
Q 015570 144 ---ITLSQEDTLFGGQVSNLQVAELLACMAKN--RSLSYCKVVEVIAET 187 (404)
Q Consensus 144 ---i~~~~~~~~~~~~Is~~DVA~ai~~~l~~--~~~~~~~i~nI~~~~ 187 (404)
+.........+.+...+|||++++.++.. ..+.-|+++.|-++.
T Consensus 210 ~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~ 258 (274)
T d1xhla_ 210 YSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS 258 (274)
T ss_dssp HHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred HHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence 00111122334467899999999999953 344568888888875
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.44 E-value=3.4e-07 Score=82.83 Aligned_cols=166 Identities=12% Similarity=0.078 Sum_probs=109.4
Q ss_pred CCeEEEEcCCCCH-hhHHHHhCCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCCEEEEe
Q 015570 16 EMLELVECDLEKR-VQIEPALGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMV 84 (404)
Q Consensus 16 ~gveiV~gDl~d~-~~l~~aL~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVkrfI~v 84 (404)
.+.+++.+|+++. +.+.+.+.++|++||+||...... .+|...+++|+.+...+++++ ++.+..++|++
T Consensus 44 ~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i 123 (234)
T d1o5ia_ 44 SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAI 123 (234)
T ss_dssp TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCCcEEEcchHHHHHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccc
Confidence 4567889999763 556677789999999999753321 223344567777766665544 45555689999
Q ss_pred ccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-CcccEEEccCCccccCc
Q 015570 85 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQ 156 (404)
Q Consensus 85 SS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~i~~~~~~~~~~~~ 156 (404)
+|....... .....|..+|..++.+.+. .|+.+..|.||++..+..... ..............+.+
T Consensus 124 ~S~~~~~~~------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~ 197 (234)
T d1o5ia_ 124 TSFSVISPI------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRM 197 (234)
T ss_dssp CCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSC
T ss_pred ccccccccc------cccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCC
Confidence 987654332 2346788999999877763 689999999999875432110 00011111122333457
Q ss_pred ccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 157 VSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 157 Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
...+|||++++.++.+. .+.-|+++.|-++-
T Consensus 198 ~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 198 AKPEEIASVVAFLCSEKASYLTGQTIVVDGGL 229 (234)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred cCHHHHHHHHHHHhChhhcCCcCcEEEECccc
Confidence 89999999999998654 33457888887774
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.43 E-value=2.1e-07 Score=85.51 Aligned_cols=155 Identities=14% Similarity=0.075 Sum_probs=97.7
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCC-
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAK- 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~ag- 77 (404)
.++..+.+|++|.+++.+++ .++|++||+||...... .+|...+++|+.+...+.+++ ++.+
T Consensus 61 ~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~ 140 (257)
T d1xg5a_ 61 GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV 140 (257)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc
Confidence 47889999999998877654 48999999999863221 123334567777766655544 4443
Q ss_pred -CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH---------HCCCCEEEEEcCccCCCCCCccCcccEEEc
Q 015570 78 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLS 147 (404)
Q Consensus 78 -VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~---------~~gl~~tIlRpg~~~G~~~~~~~~~~i~~~ 147 (404)
-.++|++||........ ......|..+|..++.+.+ ..|+.+..|.||.+-.+.............
T Consensus 141 ~~g~Ii~isS~~~~~~~p----~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~ 216 (257)
T d1xg5a_ 141 DDGHIININSMSGHRVLP----LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA 216 (257)
T ss_dssp CSCEEEEECCGGGTSCCS----CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH
T ss_pred CCCceEEEechHhcCCCC----CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHH
Confidence 35999999987543211 1223569999998887764 257889999999885432110000000000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
......+.++..+|||++++.++.++.
T Consensus 217 ~~~~~~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 217 AATYEQMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCChh
Confidence 111122346899999999999998765
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.43 E-value=4.4e-07 Score=84.61 Aligned_cols=154 Identities=12% Similarity=0.066 Sum_probs=102.0
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC-----CCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCCC
Q 015570 15 VEMLELVECDLEKRVQIEPALG-----NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVN 79 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~-----gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVk 79 (404)
..++..+.+|++|.+++..+++ .+|++||++|...... .+|...+++|+.+..++++++ ++.+-.
T Consensus 56 ~~~~~~~~~Dv~~~~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G 135 (285)
T d1jtva_ 56 PGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG 135 (285)
T ss_dssp TTSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CCceEEEeccccchHhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCC
Confidence 4579999999999999887763 6899999999864321 223344678888877766654 555667
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cc-ccEEEc---
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET-HNITLS--- 147 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~-~~i~~~--- 147 (404)
++|++||....... ..+..|..+|..++.+.+. .|+.++.|.||++.-+..... .. ..+.-.
T Consensus 136 ~Iv~isS~~g~~~~------~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~ 209 (285)
T d1jtva_ 136 RVLVTGSVGGLMGL------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI 209 (285)
T ss_dssp EEEEEEEGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCH
T ss_pred ceEEEechhhcCCC------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccch
Confidence 99999998664332 2246799999999887752 689999999999854321100 00 000000
Q ss_pred ------------cCCccccCcccHHHHHHHHHHHHhCCC
Q 015570 148 ------------QEDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 148 ------------~~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
............+|||+++++++..+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~ 248 (285)
T d1jtva_ 210 HTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK 248 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred hHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCC
Confidence 000001124578999999999998764
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.42 E-value=2.1e-07 Score=84.66 Aligned_cols=165 Identities=12% Similarity=0.041 Sum_probs=108.8
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++..+++|+.|.+++.+++ .++|++||++|...... .+|...+++|+.+...+.+++... +-+.
T Consensus 51 ~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~ 130 (241)
T d2a4ka1 51 AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGS 130 (241)
T ss_dssp SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccc
Confidence 56889999999998887654 47999999998763221 223445678888888888876542 3335
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 153 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~ 153 (404)
++++|+.+.... ..+..|+.+|..+|.+.+. .|+.+..|.||++-.+...................
T Consensus 131 i~~~ss~a~~~~-------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~ 203 (241)
T d2a4ka1 131 LVLTGSVAGLGA-------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL 203 (241)
T ss_dssp EEEECCCTTCCH-------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTT
T ss_pred eeeccccccccc-------cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCC
Confidence 555555543211 2246799999999988873 58999999999985432211111111111112333
Q ss_pred cCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 154 GGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
+.+...+|||++++.++.+. .+.-|+++.+-++.
T Consensus 204 ~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~ 238 (241)
T d2a4ka1 204 GRAGRPEEVAQAALFLLSEESAYITGQALYVDGGR 238 (241)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCc
Confidence 45678999999999999754 33457788777764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.42 E-value=5.3e-07 Score=83.37 Aligned_cols=166 Identities=15% Similarity=0.155 Sum_probs=106.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCC----------CCCcchhhHHHHHHHHHHHHH----
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF----------DITGPYRIDFQATKNLVDAAT---- 74 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~----------d~~~~~~vnv~~~~~Ll~Aa~---- 74 (404)
.++..+.+|++|.+++.+++ .++|++||++|....... +|...+++|+.+...+++++.
T Consensus 57 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~ 136 (272)
T d1xkqa_ 57 KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLV 136 (272)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccc
Confidence 46899999999998877655 479999999998633211 133345778888777777654
Q ss_pred hCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-----cc
Q 015570 75 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----TH 142 (404)
Q Consensus 75 ~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-----~~ 142 (404)
+.+ .++|+++|........ ..+..|..+|..++.+.+. .|+.+..|.||++..+...... ..
T Consensus 137 ~~~-g~iI~~~Ss~a~~~~~-----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~ 210 (272)
T d1xkqa_ 137 ASK-GEIVNVSSIVAGPQAQ-----PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQ 210 (272)
T ss_dssp HHT-CEEEEECCGGGSSSCC-----CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHH
T ss_pred ccC-CccccccchhccccCC-----CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHH
Confidence 333 3556665543322211 1246799999999887763 6899999999998643211000 00
Q ss_pred ----cEEEccCCccccCcccHHHHHHHHHHHHhCC--CCCCCcEEEEEcCC
Q 015570 143 ----NITLSQEDTLFGGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAET 187 (404)
Q Consensus 143 ----~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~--~~~~~~i~nI~~~~ 187 (404)
.+.........+.+...+|||++++.++.+. .+.-|+++.|-++.
T Consensus 211 ~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~ 261 (272)
T d1xkqa_ 211 KFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGT 261 (272)
T ss_dssp HHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCH
Confidence 0001112223345678999999999999543 33458888887774
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.40 E-value=3.2e-07 Score=83.95 Aligned_cols=161 Identities=14% Similarity=0.054 Sum_probs=102.3
Q ss_pred EEcCCCCHhhHHHH-------hCCCCEEEEcCcCCCC-CC------CCCCcchhhHHHHHHHHHHHH----HhCCCCEEE
Q 015570 21 VECDLEKRVQIEPA-------LGNASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFI 82 (404)
Q Consensus 21 V~gDl~d~~~l~~a-------L~gvDvVI~~ag~~~~-~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agVkrfI 82 (404)
+.+|+.|.+++.++ +.++|++||++|.... .. .+|...+++|+.+...+++++ ++.+-.++|
T Consensus 48 ~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV 127 (252)
T d1zmta1 48 PQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHII 127 (252)
T ss_dssp TTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceee
Confidence 34666665554433 4589999999986522 11 123344567777766666554 455556999
Q ss_pred EeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Ccc-------cEEEc
Q 015570 83 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETH-------NITLS 147 (404)
Q Consensus 83 ~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~-------~i~~~ 147 (404)
++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+..... ... .+...
T Consensus 128 ~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~ 201 (252)
T d1zmta1 128 FITSATPFGPW------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHV 201 (252)
T ss_dssp EECCSTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHH
T ss_pred ccccccccccc------ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHH
Confidence 99998764332 2246799999999888763 689999999999865422110 000 00000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.....++.+...+|||+++++++.+.. +.-|+++.|-++-
T Consensus 202 ~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~ 242 (252)
T d1zmta1 202 KKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGF 242 (252)
T ss_dssp HHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCc
Confidence 011122346789999999999997654 3357888887774
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.39 E-value=2.1e-07 Score=87.61 Aligned_cols=153 Identities=14% Similarity=0.002 Sum_probs=104.1
Q ss_pred eEEEEcCCCCHhhHHHH-------hCCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHH----HhCCCCE
Q 015570 18 LELVECDLEKRVQIEPA-------LGNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNH 80 (404)
Q Consensus 18 veiV~gDl~d~~~l~~a-------L~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa----~~agVkr 80 (404)
...+.+|+.|.++++++ +.++|++||+||..... ..+|...+++|+.+...+++++ ++.+-.+
T Consensus 64 ~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~ 143 (302)
T d1gz6a_ 64 GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGR 143 (302)
T ss_dssp TCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcE
Confidence 34566788887665544 34899999999986432 1234445688888888877765 4455569
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 153 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~ 153 (404)
+|++||....... .....|+.+|..++.+.+. .|+.+..|.||++......... ...
T Consensus 144 IV~isS~~~~~~~------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~----------~~~ 207 (302)
T d1gz6a_ 144 IIMTASASGIYGN------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP----------EDL 207 (302)
T ss_dssp EEEECCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC----------HHH
T ss_pred EEEeCChhhcCCC------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc----------Hhh
Confidence 9999998653321 1236799999999888763 6899999999987443221100 011
Q ss_pred cCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 015570 154 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 186 (404)
Q Consensus 154 ~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~ 186 (404)
..++..+|||+++++++.+....-|+++.+.++
T Consensus 208 ~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG 240 (302)
T d1gz6a_ 208 VEALKPEYVAPLVLWLCHESCEENGGLFEVGAG 240 (302)
T ss_dssp HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred HhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence 234577999999999986554455778877666
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.39 E-value=1.9e-07 Score=85.92 Aligned_cols=172 Identities=10% Similarity=0.042 Sum_probs=107.7
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHH----h-CC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----I-AK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~----~-ag 77 (404)
.++..+.+|++|.+++.+++ .++|++||++|...... .+|...+++|+.+...+.+++. + .+
T Consensus 59 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~ 138 (260)
T d1h5qa_ 59 VKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ 138 (260)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc
Confidence 46889999999998887665 37999999999763221 2334456788877777665443 2 23
Q ss_pred CCEEEEeccCcccCCCCch-hhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 78 VNHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~-~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
-.+++.+++.......... ........|..+|..++.+.+. .|+.+..|.||++..+...............
T Consensus 139 ~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~ 218 (260)
T d1h5qa_ 139 KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQAS 218 (260)
T ss_dssp CEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHH
T ss_pred ceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHh
Confidence 3455656665443221100 0112235799999999888763 6899999999999643221111000000111
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
....+.+...+|||++++.++.+.. +.-|+++.|-++.
T Consensus 219 ~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 219 NIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp TCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred cCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence 2223446789999999999996543 3357888887774
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=9.9e-07 Score=80.38 Aligned_cols=143 Identities=15% Similarity=0.082 Sum_probs=99.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
.++..+.||++|.+++.+++ .++|++||++|...... .++...+++|+.+..++++++ ++.+-
T Consensus 56 ~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~ 135 (244)
T d1yb1a_ 56 AKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNH 135 (244)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCC
Confidence 57899999999998877654 37999999999874321 123345678888777766644 55676
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH----------CCCCEEEEEcCccCCCCCCccCcccEEEcc
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA----------SGLPYTIVRPGGMERPTDAYKETHNITLSQ 148 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~----------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~ 148 (404)
.++|++||....... ..+..|..+|..++.+.+. .|+.++.|.||++-.+... .
T Consensus 136 G~Iv~isS~~~~~~~------~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~--~-------- 199 (244)
T d1yb1a_ 136 GHIVTVASAAGHVSV------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK--N-------- 199 (244)
T ss_dssp EEEEEECCCC-CCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT--C--------
T ss_pred ceEEEeecchhcCCC------CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh--C--------
Confidence 799999998765431 2246799999998777652 4789999999988432111 0
Q ss_pred CCccccCcccHHHHHHHHHHHHhCCC
Q 015570 149 EDTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 149 ~~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
........+..+|||+.+...+....
T Consensus 200 ~~~~~~~~~~pe~va~~i~~~~~~~~ 225 (244)
T d1yb1a_ 200 PSTSLGPTLEPEEVVNRLMHGILTEQ 225 (244)
T ss_dssp THHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred cCccccCCCCHHHHHHHHHHHHhcCC
Confidence 01112345688999999998887654
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.34 E-value=3e-07 Score=84.07 Aligned_cols=165 Identities=12% Similarity=0.066 Sum_probs=106.4
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCC----------CCCCCcchhhHHHHHHHHHHHHHhC--
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATIA-- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~----------~~d~~~~~~vnv~~~~~Ll~Aa~~a-- 76 (404)
.+...+.+|+.|.+++++++ .++|++||++|..... ..+|...+++|+.+...+++++...
T Consensus 58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~ 137 (256)
T d1ulua_ 58 GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR 137 (256)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE
T ss_pred CcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhc
Confidence 45778999999998877665 4799999999875211 1122234567888888888776543
Q ss_pred CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC--cccEEEc
Q 015570 77 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNITLS 147 (404)
Q Consensus 77 gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~--~~~i~~~ 147 (404)
+-.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+...... .......
T Consensus 138 ~~G~Iv~isS~~~~~~~------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~ 211 (256)
T d1ulua_ 138 EGGGIVTLTYYASEKVV------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRV 211 (256)
T ss_dssp EEEEEEEEECGGGTSBC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHH
T ss_pred cCCEEEEEeehHhcCCC------CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHH
Confidence 11479999988764322 2246799999999988763 6899999999998654322110 0000000
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
......+.+...+|||++++.++.+.. +.-|+++.|-++
T Consensus 212 ~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 251 (256)
T d1ulua_ 212 AQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251 (256)
T ss_dssp HHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcC
Confidence 111223446789999999999997543 335778877666
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.32 E-value=5.7e-07 Score=82.49 Aligned_cols=167 Identities=12% Similarity=0.070 Sum_probs=106.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++..+.+|++|.+++...+ .+.|++||++|...... .+|...+.+|+.+...+++++... .-.+
T Consensus 56 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~ 135 (259)
T d1ja9a_ 56 AQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGR 135 (259)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEE
T ss_pred CCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCc
Confidence 47889999999998877655 37999999999864321 122334577887777777766542 1235
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC----------ccCc--
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA----------YKET-- 141 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~----------~~~~-- 141 (404)
+|+++|........ ..+..|..+|..++.+.+. .|+.+..|.||++..+... ....
T Consensus 136 ~iii~s~~~~~~~~-----~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~ 210 (259)
T d1ja9a_ 136 IILTSSIAAVMTGI-----PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQ 210 (259)
T ss_dssp EEEECCGGGTCCSC-----CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCH
T ss_pred ccccccccccccCC-----CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCH
Confidence 66666654322221 1245799999999888863 5899999999998532100 0000
Q ss_pred cc-EEEccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEEEEcCC
Q 015570 142 HN-ITLSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 187 (404)
Q Consensus 142 ~~-i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~nI~~~~ 187 (404)
.. ..........+.+...+|||++++.++.+... --|+++.|-++.
T Consensus 211 ~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 211 EKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 00 00011112234567899999999999976543 346777776653
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.30 E-value=5.3e-07 Score=82.61 Aligned_cols=162 Identities=12% Similarity=0.052 Sum_probs=106.9
Q ss_pred CCeEEEEcCCCCHhhHHHHhC-----------CCCEEEEcCcCCCCC------C---CCCCcchhhHHHHHHHHHHHHHh
Q 015570 16 EMLELVECDLEKRVQIEPALG-----------NASVVICCIGASEKE------V---FDITGPYRIDFQATKNLVDAATI 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~-----------gvDvVI~~ag~~~~~------~---~d~~~~~~vnv~~~~~Ll~Aa~~ 75 (404)
.++..+.+|++|.+++.++++ +.|++|+++|..... . .+|...+++|+.+...+++++..
T Consensus 60 ~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 139 (259)
T d1oaaa_ 60 LKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLN 139 (259)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 468899999999988877652 467899999864211 1 12344577899999998887764
Q ss_pred C----C--CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-----CCCCEEEEEcCccCCCCCCccCc--c
Q 015570 76 A----K--VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKET--H 142 (404)
Q Consensus 76 a----g--VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-----~gl~~tIlRpg~~~G~~~~~~~~--~ 142 (404)
. + ..++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+....... .
T Consensus 140 ~m~~~~~~~g~Iv~isS~~~~~~~------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~ 213 (259)
T d1oaaa_ 140 AFQDSPGLSKTVVNISSLCALQPY------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSK 213 (259)
T ss_dssp TSCCCTTCEEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCS
T ss_pred HHHhcCCCcccccccccccccCCC------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCC
Confidence 3 2 2489999998664332 2246899999999887763 68999999999996532110000 0
Q ss_pred ---cEEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEE
Q 015570 143 ---NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV 183 (404)
Q Consensus 143 ---~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI 183 (404)
...........+.+...+|+|++++.++.+..+.-|+.++|
T Consensus 214 ~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~~s~~TG~~idv 257 (259)
T d1oaaa_ 214 DPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp CHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence 00000000112235789999999999998766555666654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.27 E-value=1.5e-06 Score=79.52 Aligned_cols=163 Identities=12% Similarity=0.001 Sum_probs=108.2
Q ss_pred CCCeEEEEcCCC-CHhhHHHH-------hCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHh----C---CCC
Q 015570 15 VEMLELVECDLE-KRVQIEPA-------LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI----A---KVN 79 (404)
Q Consensus 15 ~~gveiV~gDl~-d~~~l~~a-------L~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~----a---gVk 79 (404)
..++.++.+|+. +.+++.++ +.++|++||+||... ..+|+..+++|+.++.++.+++.. . ...
T Consensus 54 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g 131 (254)
T d1sbya1 54 KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGG 131 (254)
T ss_dssp TSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCE
T ss_pred CCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCc
Confidence 357889999997 55555543 358999999999764 346677789999988887776643 2 235
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-ccEEEc-cCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLS-QED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~i~~~-~~~ 150 (404)
++|++||....... ..+..|+.+|..+..+.+. .|+.+..|.||++..+....... ....-. ...
T Consensus 132 ~Ii~isS~~~~~~~------~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~ 205 (254)
T d1sbya1 132 IIANICSVTGFNAI------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL 205 (254)
T ss_dssp EEEEECCGGGTSCC------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH
T ss_pred eEEEEechhhccCC------CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhc
Confidence 79999998764332 2246799999988877753 68999999999986431110000 000000 000
Q ss_pred ccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
.........++||++++.+++... .|+++.+-++.
T Consensus 206 ~~~~~~~~~e~va~~~~~~~~~~~--tG~vi~vdgG~ 240 (254)
T d1sbya1 206 LLSHPTQTSEQCGQNFVKAIEANK--NGAIWKLDLGT 240 (254)
T ss_dssp HTTSCCEEHHHHHHHHHHHHHHCC--TTCEEEEETTE
T ss_pred cccCCCCCHHHHHHHHHHhhhCCC--CCCEEEECCCE
Confidence 111234578999999998887654 47788877764
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.24 E-value=2.2e-06 Score=78.93 Aligned_cols=167 Identities=13% Similarity=0.075 Sum_probs=108.9
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------CCCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.++..+.+|+.|.+++.+.+ .+.|++||++|...... .++...+++|+.+...+++++... .-.+
T Consensus 68 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~ 147 (272)
T d1g0oa_ 68 SDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGR 147 (272)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCE
T ss_pred CceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccc
Confidence 46889999999998877654 48899999999864321 123334677888888888877652 2247
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc------cCcccE---
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY------KETHNI--- 144 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~------~~~~~i--- 144 (404)
+++++|....... ...+..|+.+|..++.+.+. .|+.+..|.||++..+.... ......
T Consensus 148 ~i~i~s~~~~~~~-----~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~ 222 (272)
T d1g0oa_ 148 LILMGSITGQAKA-----VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNE 222 (272)
T ss_dssp EEEECCGGGTCSS-----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHH
T ss_pred ccccccccccccc-----ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchH
Confidence 7777766432211 12345799999999888863 68999999999986421100 000000
Q ss_pred ----EEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 145 ----TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 145 ----~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
.........+.+...+|||++++.++.+.. +.-|+++.|-++.
T Consensus 223 ~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 223 EVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp HHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 001112233457899999999999996543 3347777777663
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=1.3e-06 Score=79.43 Aligned_cols=168 Identities=14% Similarity=0.085 Sum_probs=111.4
Q ss_pred CCCCeEEEEcCCCCHhhHHHH---hCCCCEEEEcCcCCCCC------CCCCCcchhhHHHHHHHHHHHHH----hCCCCE
Q 015570 14 PVEMLELVECDLEKRVQIEPA---LGNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNH 80 (404)
Q Consensus 14 ~~~gveiV~gDl~d~~~l~~a---L~gvDvVI~~ag~~~~~------~~d~~~~~~vnv~~~~~Ll~Aa~----~agVkr 80 (404)
...+++...+|+.+.+.++.. +.++|++||++|..... ..+|...+++|+.+...+++++. +.+-.+
T Consensus 48 ~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~ 127 (245)
T d2ag5a1 48 KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGN 127 (245)
T ss_dssp GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred hccCCceeeeeccccccccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCce
Confidence 346788999999887666654 45899999999986432 12334456778877777766554 445568
Q ss_pred EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-----C-cccEEEc
Q 015570 81 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----E-THNITLS 147 (404)
Q Consensus 81 fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-----~-~~~i~~~ 147 (404)
+|++||....... ......|+.+|..++.+.+. .|+.+..|.||++..+..... . .......
T Consensus 128 Ii~isS~~~~~~~-----~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~ 202 (245)
T d2ag5a1 128 IINMSSVASSVKG-----VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDF 202 (245)
T ss_dssp EEEECCSBTTTBC-----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHH
T ss_pred eeeeechhhccCC-----ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHH
Confidence 9999987542211 12346799999999998873 689999999999865321100 0 0001111
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE 186 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~ 186 (404)
......+.+...+|||+++..++.+. .+.-|+++.|-++
T Consensus 203 ~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG 242 (245)
T d2ag5a1 203 LKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG 242 (245)
T ss_dssp HHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCC
Confidence 11223345678999999999999754 3345778887776
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.16 E-value=6e-06 Score=76.25 Aligned_cols=165 Identities=10% Similarity=-0.016 Sum_probs=106.5
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC------C-----CCCcchhhHHHHHHHHHHHH----
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------F-----DITGPYRIDFQATKNLVDAA---- 73 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~------~-----d~~~~~~vnv~~~~~Ll~Aa---- 73 (404)
.++..+.+|++|.+++.+++ ..+|++||+||...... . +|...+++|+.+...+++++
T Consensus 51 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m 130 (276)
T d1bdba_ 51 DNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPAL 130 (276)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHH
Confidence 46889999999998877664 48999999999753211 0 13344677877777766655
Q ss_pred HhCCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH------CCCCEEEEEcCccCCCCCCccCcc----c
Q 015570 74 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETH----N 143 (404)
Q Consensus 74 ~~agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~------~gl~~tIlRpg~~~G~~~~~~~~~----~ 143 (404)
++.+ .++|+++|....... .....|..+|..++.+.+. .++.+..|.||++..+........ .
T Consensus 131 ~~~~-g~iI~i~S~~~~~~~------~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~ 203 (276)
T d1bdba_ 131 VASR-GNVIFTISNAGFYPN------GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKA 203 (276)
T ss_dssp HHHT-CEEEEECCGGGTSTT------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC-----
T ss_pred HhcC-CCceeeeechhccCC------CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhc
Confidence 4444 478888876543321 1235799999999888763 458999999999864322111000 0
Q ss_pred EE------EccCCccccCcccHHHHHHHHHHHHhC--CCCCCCcEEEEEcCC
Q 015570 144 IT------LSQEDTLFGGQVSNLQVAELLACMAKN--RSLSYCKVVEVIAET 187 (404)
Q Consensus 144 i~------~~~~~~~~~~~Is~~DVA~ai~~~l~~--~~~~~~~i~nI~~~~ 187 (404)
.. ........+.+...+|||++++.++.. ..+.-|+++.|-++-
T Consensus 204 ~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 204 ISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp ----CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred cCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence 00 001112233466889999999998852 344568889887773
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.10 E-value=5.1e-06 Score=77.03 Aligned_cols=166 Identities=12% Similarity=0.108 Sum_probs=103.0
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHH----H-hCC
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----T-IAK 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa----~-~ag 77 (404)
.++..+.+|+.|.+++..++ .++|++||++|....... ++...+.+|......+...+ . ..+
T Consensus 75 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 154 (294)
T d1w6ua_ 75 NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK 154 (294)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc
Confidence 56789999999998877654 489999999998643221 12222445555555544332 2 223
Q ss_pred CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCc--cCccc-EEEc
Q 015570 78 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETHN-ITLS 147 (404)
Q Consensus 78 VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~--~~~~~-i~~~ 147 (404)
...++.+++....... .....|..+|..++.+.+. .|+.+..|.||++..+.... ..... ....
T Consensus 155 ~~~i~~~ss~~~~~~~------~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 228 (294)
T d1w6ua_ 155 GAAFLSITTIYAETGS------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEM 228 (294)
T ss_dssp CEEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHH
T ss_pred cccccccccchhhhcc------cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHH
Confidence 3456666665443221 1235799999999988873 68999999999996542211 00110 1111
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
......+.+...+|||+++..++.+.. +.-|+++.|-++.
T Consensus 229 ~~~~pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~ 269 (294)
T d1w6ua_ 229 IGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGE 269 (294)
T ss_dssp HTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred hhcCCCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCCh
Confidence 122233457789999999999997543 3457888887773
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=1.7e-05 Score=71.44 Aligned_cols=161 Identities=12% Similarity=0.111 Sum_probs=102.0
Q ss_pred CCeEEEEcCCCCHhhHHHH-------hCCCCEEEEcCcCCCCCC------------CCCCcchhhHHHHHHHHHHHHHhC
Q 015570 16 EMLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKEV------------FDITGPYRIDFQATKNLVDAATIA 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a-------L~gvDvVI~~ag~~~~~~------------~d~~~~~~vnv~~~~~Ll~Aa~~a 76 (404)
.+...+.+|+.+.+.++.. +...|.++++++...... .+|...+.+|+.+..++.+++...
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~ 130 (248)
T d2o23a1 51 NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGE 130 (248)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCcccccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHH
Confidence 4677888888887665533 347899998887653211 122334678888888888776431
Q ss_pred ----------CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc
Q 015570 77 ----------KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK 139 (404)
Q Consensus 77 ----------gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~ 139 (404)
+-.++|++||.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+.....
T Consensus 131 ~~~~~~~~~~~~G~Ii~isS~~~~~~~------~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~ 204 (248)
T d2o23a1 131 MGQNEPDQGGQRGVIINTASVAAFEGQ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL 204 (248)
T ss_dssp HTTSCCCTTSCCEEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----
T ss_pred HHHhhhhccCCceEEEEecchhhccCC------CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC
Confidence 23489999998764332 2246799999999988873 689999999999865432211
Q ss_pred CcccEEEccCCc-cccCcccHHHHHHHHHHHHhCCCCCCCcEEEE
Q 015570 140 ETHNITLSQEDT-LFGGQVSNLQVAELLACMAKNRSLSYCKVVEV 183 (404)
Q Consensus 140 ~~~~i~~~~~~~-~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI 183 (404)
............ +.+.+...+|||++++.++.+ .+.-|++++|
T Consensus 205 ~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s~-~~itGq~I~v 248 (248)
T d2o23a1 205 PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN-PFLNGEVIRL 248 (248)
T ss_dssp -----CHHHHTCSSSCSCBCHHHHHHHHHHHHHC-TTCCSCEEEE
T ss_pred CHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC-CCCCceEeEC
Confidence 100011111111 123467899999999999875 4445777664
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.04 E-value=1.6e-05 Score=71.90 Aligned_cols=117 Identities=15% Similarity=0.090 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCCCHhhHHHHh---------CCCCEEEEcCcCCCCC----CCC---CCcchhhHHHHHHHHHHHHH----
Q 015570 15 VEMLELVECDLEKRVQIEPAL---------GNASVVICCIGASEKE----VFD---ITGPYRIDFQATKNLVDAAT---- 74 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL---------~gvDvVI~~ag~~~~~----~~d---~~~~~~vnv~~~~~Ll~Aa~---- 74 (404)
..++.++.+|++|.+++.+++ .++|++||+||..... ..+ +...+++|+.+...+++++.
T Consensus 52 ~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~ 131 (248)
T d1snya_ 52 HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLK 131 (248)
T ss_dssp CTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 368999999999998877543 3689999999975321 111 23346788888777766552
Q ss_pred hC-----------CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCC
Q 015570 75 IA-----------KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERP 134 (404)
Q Consensus 75 ~a-----------gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~ 134 (404)
+. +..++|.++|........ ....+..|..+|..+..+.+ ..|+.+..|.||++--+
T Consensus 132 ~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~---~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 132 KAAKANESQPMGVGRAAIINMSSILGSIQGN---TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp HHHHHTTTSCSSTTTCEEEEECCGGGCSTTC---CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred HhhhccccccccccccccccccccccccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 21 346899999875432211 11234579999998887765 36899999999999543
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.89 E-value=7.2e-05 Score=67.46 Aligned_cols=153 Identities=9% Similarity=-0.053 Sum_probs=93.9
Q ss_pred CCCeEEEEcCCCCHhhHHHHhC---------CCCEEEEcCcCCCC-CC---C---CCCcchhhHHHHHHHHHHHHH----
Q 015570 15 VEMLELVECDLEKRVQIEPALG---------NASVVICCIGASEK-EV---F---DITGPYRIDFQATKNLVDAAT---- 74 (404)
Q Consensus 15 ~~gveiV~gDl~d~~~l~~aL~---------gvDvVI~~ag~~~~-~~---~---d~~~~~~vnv~~~~~Ll~Aa~---- 74 (404)
..+++++.+|++|.+++.++++ +.|++||+||.... .. . ++...+++|+.+...+++++.
T Consensus 50 ~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~ 129 (250)
T d1yo6a1 50 DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLK 129 (250)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHH
T ss_pred CCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4689999999999988776542 48999999997532 11 1 123356788888888776653
Q ss_pred hC-----------CCCEEEEeccCcccCCC-CchhhcccchHHHHHHHHHHHHHH-------HCCCCEEEEEcCccCCCC
Q 015570 75 IA-----------KVNHFIMVSSLGTNKFG-FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPT 135 (404)
Q Consensus 75 ~a-----------gVkrfI~vSS~gv~~~~-~~~~~~~~~~~y~~sK~~~E~~l~-------~~gl~~tIlRpg~~~G~~ 135 (404)
+. ...++|.+|+....... ...........|..+|..+..+.+ ..|+.+..|.||++--+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m 209 (250)
T d1yo6a1 130 NAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209 (250)
T ss_dssp HHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred HhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC
Confidence 21 12467777765432211 111122334579999999887765 268999999999985321
Q ss_pred CCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCCC-CCCcEEE
Q 015570 136 DAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVE 182 (404)
Q Consensus 136 ~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~~~i~n 182 (404)
.. ....++.++.++.++..+..... ..|+.|+
T Consensus 210 ~~---------------~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~ 242 (250)
T d1yo6a1 210 GG---------------KNAALTVEQSTAELISSFNKLDNSHNGRFFM 242 (250)
T ss_dssp ------------------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred CC---------------CCCCCCHHHHHHHHHHHHhcCCCCCCeEEEC
Confidence 10 01236788999888888876432 2355554
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.77 E-value=7e-05 Score=68.28 Aligned_cols=163 Identities=12% Similarity=-0.024 Sum_probs=96.8
Q ss_pred CeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCC------CCC--------------cchhhHHHHHHHH
Q 015570 17 MLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DIT--------------GPYRIDFQATKNL 69 (404)
Q Consensus 17 gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~------d~~--------------~~~~vnv~~~~~L 69 (404)
.+..+.+|+++.+++.+++ .++|++||++|....... ++. ..+.+|+.+...+
T Consensus 71 ~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 150 (284)
T d1e7wa_ 71 SGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFL 150 (284)
T ss_dssp C----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHH
T ss_pred ccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeee
Confidence 3445667788887777654 589999999998632210 111 1245566666666
Q ss_pred HHHHHh----------CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccC
Q 015570 70 VDAATI----------AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME 132 (404)
Q Consensus 70 l~Aa~~----------agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~ 132 (404)
.+++.. .+..++|++++....... .....|..+|..++.+.+. .|+.+..|.||++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~ 224 (284)
T d1e7wa_ 151 IKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 224 (284)
T ss_dssp HHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred eccccchhhhhHHHhcCCCCcccccccccccCCc------cceeeeccccccchhhhHHHHHHhCCcccccccccccccc
Confidence 665432 123367777776554332 1236799999999988873 68999999999743
Q ss_pred CCCCCccCcccEEEccCCc-cccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 133 RPTDAYKETHNITLSQEDT-LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 133 G~~~~~~~~~~i~~~~~~~-~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
....... .......... +.+.+...+|||+++++++.+.. +.-|+++.|-++.
T Consensus 225 ~~~~~~~--~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~ 279 (284)
T d1e7wa_ 225 LVDDMPP--AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 279 (284)
T ss_dssp CGGGSCH--HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ccccCCH--HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcCh
Confidence 2111110 0000011111 22446789999999999996543 3457788777763
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.77 E-value=3e-05 Score=69.59 Aligned_cols=136 Identities=11% Similarity=0.069 Sum_probs=90.7
Q ss_pred CCCEEEEcCcCCCCC-C------CCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCcccCCCCchhhcccchHHHH
Q 015570 37 NASVVICCIGASEKE-V------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLL 107 (404)
Q Consensus 37 gvDvVI~~ag~~~~~-~------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~ 107 (404)
++|++||+||..... . .++...+++|+.+..++++++... +-.++|++||....... ..+..|+.
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------~~~~~Y~a 144 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------PGMIGYGM 144 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------TTBHHHHH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc------cCCcccHH
Confidence 489999999964221 1 123334678888888877776542 22489999998764432 22468999
Q ss_pred HHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhCCCC-CC
Q 015570 108 WKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL-SY 177 (404)
Q Consensus 108 sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~-~~ 177 (404)
+|..++.+.+. .|+.+..|.||++..+... .......+..++..++||+.++.++..... ..
T Consensus 145 sKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~--------~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~i~ 216 (236)
T d1dhra_ 145 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR--------KSMPEADFSSWTPLEFLVETFHDWITGNKRPNS 216 (236)
T ss_dssp HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH--------HHSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch--------hhCccchhhcCCCHHHHHHHHHHHhCCCccCCC
Confidence 99999998873 3688999999999653211 011112234578899999999999976542 34
Q ss_pred CcEEEEEcC
Q 015570 178 CKVVEVIAE 186 (404)
Q Consensus 178 ~~i~nI~~~ 186 (404)
|+++.|+..
T Consensus 217 G~~i~v~~~ 225 (236)
T d1dhra_ 217 GSLIQVVTT 225 (236)
T ss_dssp TCEEEEEEE
T ss_pred CCeEEEEEE
Confidence 666666543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.74 E-value=2.9e-05 Score=69.49 Aligned_cols=156 Identities=12% Similarity=0.029 Sum_probs=96.9
Q ss_pred eEEEEcCCCCHhhHH-------HHh--CCCCEEEEcCcCCCCC-CC------CCCcchhhHHHHHHHHHHHHHhC--CCC
Q 015570 18 LELVECDLEKRVQIE-------PAL--GNASVVICCIGASEKE-VF------DITGPYRIDFQATKNLVDAATIA--KVN 79 (404)
Q Consensus 18 veiV~gDl~d~~~l~-------~aL--~gvDvVI~~ag~~~~~-~~------d~~~~~~vnv~~~~~Ll~Aa~~a--gVk 79 (404)
...+.+|..+.+... ..+ ...|++||+||..... .. +++..+++|+.++..+++++... +-.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g 122 (235)
T d1ooea_ 43 NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGG 122 (235)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred cceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccce
Confidence 344556665544333 222 3589999999974321 11 12334678888887777766542 124
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCcccEEEccCC
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQED 150 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~ 150 (404)
++|++||.+..... ..+..|+.+|..++.+.+. .++.+..|.||++..+... -...+
T Consensus 123 ~Iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~--------~~~~~ 188 (235)
T d1ooea_ 123 LLQLTGAAAAMGPT------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR--------KWMPN 188 (235)
T ss_dssp EEEEECCGGGGSCC------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH--------HHSTT
T ss_pred EEEEeccHHhcCCc------ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchh--------hhCcC
Confidence 89999998764432 2347899999999998863 2556778999998543111 01112
Q ss_pred ccccCcccHHHHHHHHHHHHhCCC--CCCCcEEEEEcCC
Q 015570 151 TLFGGQVSNLQVAELLACMAKNRS--LSYCKVVEVIAET 187 (404)
Q Consensus 151 ~~~~~~Is~~DVA~ai~~~l~~~~--~~~~~i~nI~~~~ 187 (404)
.....++..+|+++.++..+.... ...|..+.|..++
T Consensus 189 ~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v~~~~ 227 (235)
T d1ooea_ 189 ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN 227 (235)
T ss_dssp CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred CccccCCCHHHHHHHHHHHhcCccccCCCceEEEEEeeC
Confidence 223457899999999987775542 2346777775443
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.70 E-value=5.2e-05 Score=69.42 Aligned_cols=142 Identities=13% Similarity=-0.001 Sum_probs=93.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHHHhC--CCCE
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA--KVNH 80 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa~~a--gVkr 80 (404)
.+++++.+|+.|.+++.+++ .++|++||+||....... ++...+++|+.+...+++++... .-.|
T Consensus 53 ~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ 132 (275)
T d1wmaa1 53 LSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGR 132 (275)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEE
T ss_pred CcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 56899999999998877554 479999999998643211 22334678999999988887542 1248
Q ss_pred EEEeccCcccCC---CCc--------------------------------hhhcccchHHHHHHHHHHHHHH-------H
Q 015570 81 FIMVSSLGTNKF---GFP--------------------------------AAILNLFWGVLLWKRKAEEALI-------A 118 (404)
Q Consensus 81 fI~vSS~gv~~~---~~~--------------------------------~~~~~~~~~y~~sK~~~E~~l~-------~ 118 (404)
+|++||...... ..+ .........|..+|..+..+.+ .
T Consensus 133 ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~ 212 (275)
T d1wmaa1 133 VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE 212 (275)
T ss_dssp EEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998643110 000 0001123469999988765432 1
Q ss_pred ----CCCCEEEEEcCccCCCCCCccCcccEEEccCCccccCcccHHHHHHHHHHHHhC
Q 015570 119 ----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 172 (404)
Q Consensus 119 ----~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~ 172 (404)
.|+.+..|.||++.-+.... ....+.+|+|+.+++++..
T Consensus 213 ~~~~~~I~vn~v~PG~v~T~m~~~---------------~~~~~pee~A~~~~~~a~~ 255 (275)
T d1wmaa1 213 QRKGDKILLNACCPGWVRTDMAGP---------------KATKSPEEGAETPVYLALL 255 (275)
T ss_dssp HCTTSCCEEEEEECCSBCSTTTCT---------------TCSBCHHHHTHHHHHHHSC
T ss_pred HhCCCCeEEEEEecccccCCcccC---------------cccCCHHHHHHHHHHHHcC
Confidence 48999999999985432110 1234789999999887643
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=0.00015 Score=65.20 Aligned_cols=166 Identities=14% Similarity=0.083 Sum_probs=102.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCCCCCC-----------cchhhHHHHHHHHHHHHHhC-
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVFDIT-----------GPYRIDFQATKNLVDAATIA- 76 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~~d~~-----------~~~~vnv~~~~~Ll~Aa~~a- 76 (404)
.+...+.+|+.+..++...+ ...|++||+++.......+.. ....+++.+...+++++...
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (258)
T d1qsga_ 55 GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 134 (258)
T ss_dssp TCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred CCcceeecccchHHHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45677888888876655544 367999999987633222111 11234455555555555432
Q ss_pred -CCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccC-cccEE-E
Q 015570 77 -KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNIT-L 146 (404)
Q Consensus 77 -gVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~-~~~i~-~ 146 (404)
+-+.+|++|+.+..... .....|..+|..++.+.+. .|+.+..|+||++..+...... ..... .
T Consensus 135 ~~~~~Ii~iss~~~~~~~------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~ 208 (258)
T d1qsga_ 135 NPGSALLTLSYLGAERAI------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAH 208 (258)
T ss_dssp EEEEEEEEEECGGGTSBC------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHH
T ss_pred cCCcEEEEecchhhccCC------CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHH
Confidence 22367888887654321 1235799999999988874 6899999999999765332111 11100 0
Q ss_pred ccCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 147 SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 147 ~~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
.......+.+...+|||++++.++.+. .+--|+++.|-++.
T Consensus 209 ~~~~~pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~ 250 (258)
T d1qsga_ 209 CEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 250 (258)
T ss_dssp HHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHhCCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCH
Confidence 011122334678999999999999654 33457777776663
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.47 E-value=0.00017 Score=63.95 Aligned_cols=165 Identities=15% Similarity=0.091 Sum_probs=101.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh------CCCCEEEEcCcCCCCC-C---------CCCCcchhhHHHHHHHHHHHHHh----
Q 015570 16 EMLELVECDLEKRVQIEPAL------GNASVVICCIGASEKE-V---------FDITGPYRIDFQATKNLVDAATI---- 75 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL------~gvDvVI~~ag~~~~~-~---------~d~~~~~~vnv~~~~~Ll~Aa~~---- 75 (404)
.++..+++|+.+...+..+. ...+.+++.++..... . ..+...+++|+.+...++..+..
T Consensus 38 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 117 (241)
T d1uaya_ 38 EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 117 (241)
T ss_dssp SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred ccceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Confidence 46778899999886655543 2556666666543211 0 01122346666666666555432
Q ss_pred ------CCCCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcc
Q 015570 76 ------AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH 142 (404)
Q Consensus 76 ------agVkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~ 142 (404)
.+-.++|++||....... ..+..|..+|..++.+.+. .|+.+..|.||++..+........
T Consensus 118 ~~~~~~~~~G~Ii~isS~~~~~~~------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~ 191 (241)
T d1uaya_ 118 NPPDAEGQRGVIVNTASVAAFEGQ------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK 191 (241)
T ss_dssp CCCCTTSCSEEEEEECCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH
T ss_pred hhhhcccCceeeeeecchhhccCC------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhh
Confidence 233589999998764322 1246899999999988863 689999999999964321111000
Q ss_pred c-EEEccCCccccCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcCC
Q 015570 143 N-ITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 187 (404)
Q Consensus 143 ~-i~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~~~~~~i~nI~~~~ 187 (404)
. ..+.......+.+...+|||+++++++.+ .+.-|+++.|-++-
T Consensus 192 ~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~-~~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 192 AKASLAAQVPFPPRLGRPEEYAALVLHILEN-PMLNGEVVRLDGAL 236 (241)
T ss_dssp HHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTC
T ss_pred HHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC-CCCCCCEEEECCcc
Confidence 0 01111111223456899999999999985 44568888887774
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.42 E-value=6.6e-05 Score=70.67 Aligned_cols=95 Identities=8% Similarity=0.022 Sum_probs=63.4
Q ss_pred HHhCCCCEEEEcCcCCCCCC--------CCCCcchhhHHHHHHHHHHHHHhC--CCCEEEEeccCcccCCCCchhhcccc
Q 015570 33 PALGNASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF 102 (404)
Q Consensus 33 ~aL~gvDvVI~~ag~~~~~~--------~d~~~~~~vnv~~~~~Ll~Aa~~a--gVkrfI~vSS~gv~~~~~~~~~~~~~ 102 (404)
+.+.++|++||++|...... .+|...+++|+.+...+++++... +-.++|.+||.+..... .+..
T Consensus 109 ~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~-----p~y~ 183 (329)
T d1uh5a_ 109 QKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV-----PGYG 183 (329)
T ss_dssp HHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC-----TTCT
T ss_pred HHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhcccc-----cccc
Confidence 33468999999998653211 123334567777777777776543 22478889887664432 1223
Q ss_pred hHHHHHHHHHHHHHHH--------CCCCEEEEEcCccC
Q 015570 103 WGVLLWKRKAEEALIA--------SGLPYTIVRPGGME 132 (404)
Q Consensus 103 ~~y~~sK~~~E~~l~~--------~gl~~tIlRpg~~~ 132 (404)
..|+.+|..++.+.+. .|+.+..|.||.+-
T Consensus 184 ~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 184 GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 4588999999887762 48999999999873
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.24 E-value=0.00056 Score=62.15 Aligned_cols=144 Identities=13% Similarity=0.057 Sum_probs=92.0
Q ss_pred CCeEEEEcCCCCHhhHHHH-------hCCCCEEEEcCcCCCCCCC------CCCcchhhHHHHHHHHHHHH----HhCCC
Q 015570 16 EMLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKV 78 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~a-------L~gvDvVI~~ag~~~~~~~------d~~~~~~vnv~~~~~Ll~Aa----~~agV 78 (404)
..+..+.+|+.+...+... +.+.|++|+++|....... ++...+++|+.+...+.+++ ++.+
T Consensus 64 ~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~- 142 (269)
T d1xu9a_ 64 ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN- 142 (269)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-
Confidence 4677888999887665543 3478999999987643221 12233567777666665554 3333
Q ss_pred CEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH---------CCCCEEEEEcCccCCCCCCccCcccEEEccC
Q 015570 79 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQE 149 (404)
Q Consensus 79 krfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~---------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~ 149 (404)
.++|++||....... ..+..|+.+|+.++.+.+. .++.+..|.||++-.+... . ...
T Consensus 143 G~ii~isS~~~~~~~------p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~----~----~~~ 208 (269)
T d1xu9a_ 143 GSIVVVSSLAGKVAY------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM----K----AVS 208 (269)
T ss_dssp CEEEEEEEGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH----H----HSC
T ss_pred CcceEeccchhcCCC------CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHH----H----hcc
Confidence 589999988764332 2346899999999877652 3577889999999532110 0 001
Q ss_pred CccccCcccHHHHHHHHHHHHhCCC
Q 015570 150 DTLFGGQVSNLQVAELLACMAKNRS 174 (404)
Q Consensus 150 ~~~~~~~Is~~DVA~ai~~~l~~~~ 174 (404)
+......+..+++|+.++..+....
T Consensus 209 ~~~~~~~~~~e~~a~~i~~~~~~~~ 233 (269)
T d1xu9a_ 209 GIVHMQAAPKEECALEIIKGGALRQ 233 (269)
T ss_dssp GGGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred CCccccCCCHHHHHHHHHHHhhcCC
Confidence 1111234678999999988776544
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.18 E-value=0.0027 Score=56.61 Aligned_cols=100 Identities=15% Similarity=0.056 Sum_probs=62.7
Q ss_pred EEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCcccEEEccCCcc
Q 015570 80 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 152 (404)
Q Consensus 80 rfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~~~i~~~~~~~~ 152 (404)
.++.+++.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+........ ........
T Consensus 153 ~~~~~~~~~~~~~~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~--~~~~~~~p 224 (266)
T d1mxha_ 153 SVVNLCDAMTDLPL------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQ--EEYRRKVP 224 (266)
T ss_dssp EEEEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHH--HHHHTTCT
T ss_pred cchhhhhccccccC------cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHH--HHHHhcCC
Confidence 55556665543221 2346799999999988763 689999999999865432211110 00111111
Q ss_pred c-cCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcCC
Q 015570 153 F-GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 187 (404)
Q Consensus 153 ~-~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~~ 187 (404)
+ +.+...+|||++++.++.+.. +.-|+++.|-++-
T Consensus 225 l~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~ 261 (266)
T d1mxha_ 225 LGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 261 (266)
T ss_dssp TTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence 2 224689999999999997653 3457788877763
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.11 E-value=0.00018 Score=65.96 Aligned_cols=149 Identities=8% Similarity=-0.000 Sum_probs=89.9
Q ss_pred HHhCCCCEEEEcCcCCCCC---C-----CCCCcchhhHHHHHHHHHHHHHhCCC--CEEEEeccCcccCCCCchhhcccc
Q 015570 33 PALGNASVVICCIGASEKE---V-----FDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSSLGTNKFGFPAAILNLF 102 (404)
Q Consensus 33 ~aL~gvDvVI~~ag~~~~~---~-----~d~~~~~~vnv~~~~~Ll~Aa~~agV--krfI~vSS~gv~~~~~~~~~~~~~ 102 (404)
+.+.++|++||++|..... . .+|...+++|+.+...+++++..... .+.+.+++.+...... ...
T Consensus 115 ~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~ 189 (297)
T d1d7oa_ 115 QDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP-----GYG 189 (297)
T ss_dssp HHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----TCT
T ss_pred HHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccccc-----ccc
Confidence 3456899999999874211 1 12333457788888888887765421 2455555554432221 123
Q ss_pred hHHHHHHHHHHHHHH--------HCCCCEEEEEcCccCCCCCCccCc--ccEEEccCCccccCcccHHHHHHHHHHHHhC
Q 015570 103 WGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAELLACMAKN 172 (404)
Q Consensus 103 ~~y~~sK~~~E~~l~--------~~gl~~tIlRpg~~~G~~~~~~~~--~~i~~~~~~~~~~~~Is~~DVA~ai~~~l~~ 172 (404)
..|..+|..++.+.+ +.|+.+..|.||++..+....... ...........++.+...+|||++++.++.+
T Consensus 190 ~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~ 269 (297)
T d1d7oa_ 190 GGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSP 269 (297)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSG
T ss_pred cceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCc
Confidence 458888877766654 258999999999997653321110 0000111112234467899999999999965
Q ss_pred CC-CCCCcEEEEEcC
Q 015570 173 RS-LSYCKVVEVIAE 186 (404)
Q Consensus 173 ~~-~~~~~i~nI~~~ 186 (404)
.. +.-|+++.|-++
T Consensus 270 ~a~~itGq~i~vDGG 284 (297)
T d1d7oa_ 270 LASAITGATIYVDNG 284 (297)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred hhcCCcCceEEECcC
Confidence 43 335778877766
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=96.91 E-value=0.0015 Score=58.83 Aligned_cols=166 Identities=14% Similarity=0.085 Sum_probs=95.1
Q ss_pred CCeEEEEcCCCCHhhHHHHh-------CCCCEEEEcCcCCCCCC--CCCC-cc---hhhH----HHHHHHHHHHHHhC-C
Q 015570 16 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV--FDIT-GP---YRID----FQATKNLVDAATIA-K 77 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL-------~gvDvVI~~ag~~~~~~--~d~~-~~---~~vn----v~~~~~Ll~Aa~~a-g 77 (404)
....++.+|+.+.+++.+++ ..+|++||++|...... .+.. .. +..+ ......++..+... +
T Consensus 55 ~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (274)
T d2pd4a1 55 NSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN 134 (274)
T ss_dssp TCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred CceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc
Confidence 45678899999987766554 58999999999763321 1111 11 1111 11222222222221 2
Q ss_pred CCE-EEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCccCc-cc-EEEc
Q 015570 78 VNH-FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN-ITLS 147 (404)
Q Consensus 78 Vkr-fI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~~~-~~-i~~~ 147 (404)
-.+ ++++|+.+..... .....|+.+|..++.+.+. .|+.+..|.||.+..+....... .. ....
T Consensus 135 ~~~~i~~~s~~~~~~~~------~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~ 208 (274)
T d2pd4a1 135 NGASVLTLSYLGSTKYM------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWN 208 (274)
T ss_dssp EEEEEEEEECGGGTSBC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHH
T ss_pred cCcceeeeccccccccc------ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHH
Confidence 223 4444544433221 2235689999999888763 78999999999987543321110 00 0001
Q ss_pred cCCccccCcccHHHHHHHHHHHHhCC-CCCCCcEEEEEcCC
Q 015570 148 QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 187 (404)
Q Consensus 148 ~~~~~~~~~Is~~DVA~ai~~~l~~~-~~~~~~i~nI~~~~ 187 (404)
......+.+...+|||++++.++.+. .+.-|+++.|-++.
T Consensus 209 ~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~ 249 (274)
T d2pd4a1 209 EINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 249 (274)
T ss_dssp HHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hhhhhccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCCh
Confidence 11122345789999999999999764 33457788877773
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=96.90 E-value=0.0015 Score=58.57 Aligned_cols=165 Identities=12% Similarity=0.051 Sum_probs=92.3
Q ss_pred CCeEEEEcCCCCHhhHHHHh----------CCCCEEEEcCcCCCCCCCCCCcc-----------hhhHHHHHHHHHHHHH
Q 015570 16 EMLELVECDLEKRVQIEPAL----------GNASVVICCIGASEKEVFDITGP-----------YRIDFQATKNLVDAAT 74 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL----------~gvDvVI~~ag~~~~~~~d~~~~-----------~~vnv~~~~~Ll~Aa~ 74 (404)
.+...+++|+.+.+++..++ ...|++||++|...........+ +.++......++.++.
T Consensus 55 ~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (268)
T d2h7ma1 55 AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALL 134 (268)
T ss_dssp SCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred CceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHh
Confidence 46778999999986655442 35799999999753222111111 1223333333333333
Q ss_pred hCC-CCEEEEeccCcccCCCCchhhcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCC------ccC
Q 015570 75 IAK-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA------YKE 140 (404)
Q Consensus 75 ~ag-VkrfI~vSS~gv~~~~~~~~~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~------~~~ 140 (404)
... ...+|++++.+..... ..+..|+.+|..++.+.+. .|+.+..|.||++..+... ...
T Consensus 135 ~~~~~~~~i~~~s~~~~~~~------p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~ 208 (268)
T d2h7ma1 135 PIMNPGGSIVGMDFDPSRAM------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGE 208 (268)
T ss_dssp GGEEEEEEEEEEECCCSSCC------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCH
T ss_pred hhcccccccccccccccccC------cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhh
Confidence 321 1234444444332221 2245799999999988873 6899999999998642110 000
Q ss_pred --cccE-----EEccCCccccCcccHHHHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 141 --THNI-----TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 141 --~~~i-----~~~~~~~~~~~~Is~~DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
.... .......+.+.+...+|||++++.++.+.. +.-|+++.|-++
T Consensus 209 ~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG 262 (268)
T d2h7ma1 209 EAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 262 (268)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred hhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 0000 000111122336789999999999996543 234666766655
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.18 E-value=0.038 Score=48.45 Aligned_cols=149 Identities=12% Similarity=0.150 Sum_probs=80.4
Q ss_pred CCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHH----HHHhCCCCEEEEeccCcccCCCCchh---------------
Q 015570 37 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFPAA--------------- 97 (404)
Q Consensus 37 gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~----Aa~~agVkrfI~vSS~gv~~~~~~~~--------------- 97 (404)
.+|++|+++|..... ..+.....+|..+...+.+ ...+......+.+++...........
T Consensus 62 ~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~ 140 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140 (257)
T ss_dssp CCSEEEECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred CCcEEEEcCCCCCcH-HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEe
Confidence 589999999865321 1122233455555555444 34444555566666543321110000
Q ss_pred -------hcccchHHHHHHHHHHHHHHH-------CCCCEEEEEcCccCCCCCCcc-Cccc--EEEccCCccccCcccHH
Q 015570 98 -------ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHN--ITLSQEDTLFGGQVSNL 160 (404)
Q Consensus 98 -------~~~~~~~y~~sK~~~E~~l~~-------~gl~~tIlRpg~~~G~~~~~~-~~~~--i~~~~~~~~~~~~Is~~ 160 (404)
.......|..+|..++.+.+. .|+.+..|.||++..+..... .... -.+.......+.+...+
T Consensus 141 s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~ 220 (257)
T d1fjha_ 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPS 220 (257)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTH
T ss_pred eehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHH
Confidence 011223699999999988873 689999999999865422110 0001 11111112334567899
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEEcC
Q 015570 161 QVAELLACMAKNRS-LSYCKVVEVIAE 186 (404)
Q Consensus 161 DVA~ai~~~l~~~~-~~~~~i~nI~~~ 186 (404)
|||++++.++.+.. +.-|+++.+-++
T Consensus 221 eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 221 EMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhCCccCceEEeCCC
Confidence 99999999996543 345777777665
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.40 E-value=0.37 Score=38.79 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=45.1
Q ss_pred HhhHHHHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEEec
Q 015570 28 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 85 (404)
Q Consensus 28 ~~~l~~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~vS 85 (404)
..++.++++++|+||.++|.......+-.+....|....+.+++.+.+.+-+-+|.+-
T Consensus 59 ~~~~~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv 116 (144)
T d1mlda1 59 PEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII 116 (144)
T ss_dssp GGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred CCChHHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 4566678899999999999865554555677899999999999999998766444443
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.08 E-value=0.6 Score=37.48 Aligned_cols=51 Identities=12% Similarity=0.098 Sum_probs=38.3
Q ss_pred HHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCEEEE
Q 015570 33 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 83 (404)
Q Consensus 33 ~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkrfI~ 83 (404)
++++++|+||.+||.......+-.+.++.|..-.+.+++.+.+.+-+.+|.
T Consensus 70 ~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iiv 120 (145)
T d1hyea1 70 RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFV 120 (145)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEE
Confidence 357799999999998655444445667889989999999998876554443
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=83.99 E-value=0.82 Score=36.65 Aligned_cols=53 Identities=25% Similarity=0.339 Sum_probs=41.2
Q ss_pred HHhCCCCEEEEcCcCCCCCCCCCCcchhhHHHHHHHHHHHHHhCCCCE-EEEec
Q 015570 33 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS 85 (404)
Q Consensus 33 ~aL~gvDvVI~~ag~~~~~~~d~~~~~~vnv~~~~~Ll~Aa~~agVkr-fI~vS 85 (404)
.+++++|+||.++|.......+-.+....|..-.+.+++.+.+.+-+. ||.+|
T Consensus 65 ~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 65 PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 357899999999998766555666778899999999999998876554 44443
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=81.93 E-value=0.38 Score=40.15 Aligned_cols=33 Identities=9% Similarity=0.048 Sum_probs=29.4
Q ss_pred CCeEEEEcCCCCHhhHHHHhCCCCEEEEcCcCC
Q 015570 16 EMLELVECDLEKRVQIEPALGNASVVICCIGAS 48 (404)
Q Consensus 16 ~gveiV~gDl~d~~~l~~aL~gvDvVI~~ag~~ 48 (404)
.+++++.+|+.|.+.+.+++.++|+|||++|..
T Consensus 71 ~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 71 FKVNVTAAETADDASRAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp HTCCCEEEECCSHHHHHHHTTTCSEEEECCCTT
T ss_pred cchhhhhhhcccHHHHHHHhcCcCeeeecCccc
Confidence 456788899999999999999999999999864
|