Citrus Sinensis ID: 015578

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400----
Protein Sequence
MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFFSHIRHYLNMIGEGCAN
Secondary Structure (PSIPRED)
ccccHHHHHHHcccccccccccEEEccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccHHHHHHHHHHccccccHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHEEcccccccccEEEEccccccHHHHHHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccccccccccccEccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mskcgyiarlelqpsisnlgydlklenfpggseTFEIILKFCyglpiafnpnniaplrcasefldmseeyedgnliskTEAFLTLVILSSWKETITVLKScknlspwaENLQIVRRCCDSIAWkasrensttedianrqgwwfddvatlGIDHFMRIITTIkvkgtkpeiIGKCIMHYAKKWlpgmdveleglrgygygkhELQFSILNAGKEEVSVGQKEQRTIIENLVNllphqdegvscKFFLQMLKMAMVYNASPALISELEKRVGMMLedanandllipnyknedhaklnspehntmhnIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAevardpnlsiTKFQVLAEslpenartcHDGLYRAIDTYLKPIVFFSHIRHYLNMIGEGCAN
Flexible Loop (DISEMBL)
MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWkasrensttedianrqgwwFDDVATLGIDHFMRIITTikvkgtkpeiIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAklnspehntmHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFFSHIRHYLNMIGEGCAN
Low Complexity Region (SEG)
MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHEqqqqqkqqNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFFSHIRHYLNMIGEGCAN
Disordered region (IsUnstruct)
***CGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNY***************MHNIDVVQRIMDYFLM******************KILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFFSHIRHYLNMIGE****
Disordered Region (DISOPRED)
*SKCGYI***************LKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENS*****ANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMD**************EL****************KEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYK************NTMHNIDVVQRIMDY********************SKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFFSHIRHYLNMIGEGCA*
Disordered Region (DISEMBL)
MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGK********EQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLMH************KTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFFSHIRHYLNMIGEGCAN
Disordered Region (DISPRO)
**KCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENST****ANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGM********************************QKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNE***K**SPEHNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFFSHIRHYLNMIGEGCAN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFFSHIRHYLNMIGEGCAN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	404	2.2.26 [Sep-21-2011]
Q9LFU0	607	Putative BTB/POZ domain-c	yes	no	0.898	0.598	0.608	1e-135
Q5KS50	762	Coleoptile phototropism p	yes	no	0.868	0.460	0.393	3e-93
Q9FMF5	746	Root phototropism protein	no	no	0.900	0.487	0.391	4e-92
Q9S9Q9	665	BTB/POZ domain-containing	no	no	0.849	0.515	0.349	2e-65
Q9FNB3	591	Putative BTB/POZ domain-c	no	no	0.898	0.614	0.367	2e-64
Q9FN09	579	BTB/POZ domain-containing	no	no	0.819	0.571	0.341	4e-63
Q66GP0	604	BTB/POZ domain-containing	no	no	0.881	0.589	0.353	4e-62
Q9SN21	526	Putative BTB/POZ domain-c	no	no	0.876	0.673	0.356	1e-59
Q9SA69	634	BTB/POZ domain-containing	no	no	0.871	0.555	0.367	7e-59
Q94A73	668	BTB/POZ domain-containing	no	no	0.839	0.507	0.346	2e-58

>sp|Q9LFU0|DOT3_ARATH Putative BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana GN=DOT3 PE=3 SV=1

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/386 (60%), Positives = 298/386 (77%), Gaps = 23/386 (5%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +SKCGYI+ +EL+PS S  GY LKLENFPGG++TFE ILKFCY LP+  NP N+APLRCA
Sbjct: 71  ISKCGYISSIELKPSTSENGYHLKLENFPGGADTFETILKFCYNLPLDLNPLNVAPLRCA 130

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SE+L M+EE+E GNLISKTEAF+T V+L+SW++T+TVL+SC NLSPWAENLQIVRRCCD 
Sbjct: 131 SEYLYMTEEFEAGNLISKTEAFITFVVLASWRDTLTVLRSCTNLSPWAENLQIVRRCCDL 190

Query: 121 IAWKASRENSTTEDIANR-QGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYA 179
           +AWKA  +N+  ED+ +R +   ++D+ATL IDHFMR+ITT+K +  KP+I GK IM YA
Sbjct: 191 LAWKACNDNNIPEDVVDRNERCLYNDIATLDIDHFMRVITTMKARRAKPQITGKIIMKYA 250

Query: 180 KKWLPGMDVELEGLRGYGYGKHELQFSILNAGK--EEVSVGQKEQRTIIENLVNLLPHQD 237
             +LP ++ +LEG++GYG GK+ELQFS+ N G+  E  S+G +E +  IE+LV++LP Q 
Sbjct: 251 DNFLPVINDDLEGIKGYGLGKNELQFSV-NRGRMEESNSLGCQEHKETIESLVSVLPPQS 309

Query: 238 EGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSP 297
             VSC F L+MLK ++VY+ASPALIS+LEKRVGM LEDAN  DLLIPN+KNE+  +    
Sbjct: 310 GAVSCHFLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEEQQER--- 366

Query: 298 EHNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQ 357
                       RI ++FLMHEQQQ      +GK ++SK+LDNYLAE+A+DP L ITKFQ
Sbjct: 367 -----------VRIFEFFLMHEQQQV-----LGKPSISKLLDNYLAEIAKDPYLPITKFQ 410

Query: 358 VLAESLPENARTCHDGLYRAIDTYLK 383
           VLAE LPENA  CHDGLYRAID +LK
Sbjct: 411 VLAEMLPENAWKCHDGLYRAIDMFLK 436

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Arabidopsis thaliana (taxid: 3702)

>sp|Q5KS50|NPH3_ORYSJ Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1

 Score =  342 bits (877), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 182/463 (39%), Positives = 261/463 (56%), Gaps = 112/463 (24%)

Query: 25  LENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLT 84
           + + PGG+ +FE+  +F YG+ +     NI+ LRCA+E+L+M+EE E+GNLI KTEAFL+
Sbjct: 102 MGDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNLIFKTEAFLS 161

Query: 85  LVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKA------------------- 125
            V+LSSW+++I VLKSC+ LSPWAENLQIVRRC +SIAWKA                   
Sbjct: 162 YVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKACANPRGVRWAYTGAGAGSG 221

Query: 126 --------------------------------SRENSTTEDIANRQGWWFDDVATLGIDH 153
                                           S+E+S +        WWF+DV+ L IDH
Sbjct: 222 GARGGPAAIRGGGGSGGTASPRWNVGGGGGGESKESSPSRQAVPPADWWFEDVSVLRIDH 281

Query: 154 FMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGM--DVELEGLRGYGYGK----------- 200
           F+R++T IKVKG + ++IG  I HYA KWLPG+  D  L       + +           
Sbjct: 282 FVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLTKDAPLGATHDEPWAQASAAGVGGGGL 341

Query: 201 HELQFSILNAGKEEV----SVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYN 256
           H +  S    GK++V    S   +EQR ++E+++++ P Q + VSC F L++L++A++  
Sbjct: 342 HMMIISGAGGGKDDVLAACSAPSREQRMVVESIISITPPQRDSVSCGFLLRLLRLAIMLR 401

Query: 257 ASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFL 316
           A+PAL++ELEKRVGM LE A   DLLIP+Y             +T +++D+VQR++++FL
Sbjct: 402 AAPALVTELEKRVGMQLEQAALADLLIPSYGGR--------AADTAYDVDLVQRLVEHFL 453

Query: 317 MHEQQQQQKQQNMG------------------------------------KTNVSKILDN 340
           + EQ +     + G                                    K  V+++LD+
Sbjct: 454 VQEQTEMAVASSPGRGDPPPPPQPEYYSGRMPPSSAAAASASASTGGLNAKARVARLLDS 513

Query: 341 YLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
           YL+EV+RD NLS+TKFQVLAESLPE+AR C DGLYRA+D+YLK
Sbjct: 514 YLSEVSRDRNLSLTKFQVLAESLPESARACDDGLYRAVDSYLK 556

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Plays a role as signal transduction component in coleoptile phototropism and lateral translocation of auxin.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FMF5|RPT3_ARATH Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=2

 Score =  338 bits (867), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 196/501 (39%), Positives = 271/501 (54%), Gaps = 137/501 (27%)

Query: 1   MSKCGYIARL-----ELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIA 55
           +S+ G + RL     +  P+I      L L++ PGG E FE+  KFCYG+P+     NI+
Sbjct: 73  LSRSGKMNRLIYESRDPDPTI------LILDDLPGGPEAFELASKFCYGVPVDLTATNIS 126

Query: 56  PLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVR 115
            LRCA+E+L+M+E+ E+GNLI KTEAFL+ V+LSSW+++I VLKSC+ LSPWAENLQIVR
Sbjct: 127 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVR 186

Query: 116 RCCDSIAWKA-------------SRENSTTEDIA----------------------NRQ- 139
           RC +SIAWKA                + +T + A                      N Q 
Sbjct: 187 RCSESIAWKACSNPKGIRWAYTGKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNSQP 246

Query: 140 ---GWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVE------- 189
               WWF+DV+ L IDHF+R+IT IKVKG + E++G  IMHYA KWLPG+  E       
Sbjct: 247 VPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAP 306

Query: 190 ---------------------------LEGLRGYGYGKHELQFSILNAGKEE-------- 214
                                            +  G H     +L+AGK          
Sbjct: 307 AMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLH----MVLSAGKTNGHQDSVAC 362

Query: 215 ---VSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGM 271
              + +  K+QR I+E+L++++P Q + V+C F L++L+ A +   +PALI+ELEKRVGM
Sbjct: 363 LAGLGISPKDQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGM 422

Query: 272 MLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHEQQQ--------- 322
             E A   DLLIP Y N+           TM+++D+VQR++++FL+ EQ +         
Sbjct: 423 QFEQATLQDLLIPGYNNKGE---------TMYDVDLVQRLLEHFLVQEQTEGSSPSRMSP 473

Query: 323 --------------------QQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAES 362
                                       K  V++++D+YL EVARD NL +TKFQVLAE+
Sbjct: 474 SPSQSMYADIPRGNNNNGGGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEA 533

Query: 363 LPENARTCHDGLYRAIDTYLK 383
           LPE+ARTC DGLYRAID+YLK
Sbjct: 534 LPESARTCDDGLYRAIDSYLK 554

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Signal transducer of the phototropic response and photo-induced movements. Involved in the phot1 pathway under low blue light (LBL) fluence rate and in the phot2 pathway under higher fluence rate of blue light (HBL). Necessary for root and hypocotyl phototropisms, but not for the regulation of stomata opening. Not involved in chloroplast accumulation and translocation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S9Q9|Y1044_ARATH BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2

 Score =  249 bits (636), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 218/406 (53%), Gaps = 63/406 (15%)

Query: 23  LKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAF 82
           +++ + PGG +TFE++ KFCYG+ +    +N+  LRCA+E L+M+EE+ +GNLIS+TE F
Sbjct: 70  IEISDLPGGDKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNLISQTETF 129

Query: 83  LTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRE-------------- 128
              V+L SWK++I  L SC  +  +A+ L I ++C +S+A +AS +              
Sbjct: 130 FNQVVLKSWKDSIKALHSCDEVLEYADELNITKKCIESLAMRASTDPNLFGWPVVEHGGP 189

Query: 129 -------------NSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCI 175
                        ++          WW++D + L    F R+IT ++ +G + +II   +
Sbjct: 190 MQSPGGSVLWNGISTGARPKHTSSDWWYEDASMLSFPLFKRLITVMESRGIREDIIAGSL 249

Query: 176 MHYAKKWLPGMDVELEGLRGYGYGKHELQFSI-LNAGKEEVSVGQKEQRTIIENLVNLLP 234
            +Y +K LPG+     G    G      +FS  L +G     + ++EQ+ ++E +  LL 
Sbjct: 250 TYYTRKHLPGLKRRRGGPESSG------RFSTPLGSGN---VLSEEEQKNLLEEIQELLR 300

Query: 235 HQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKL 294
            Q   V  KFF+ ML++A +  ASP  I+ LEKR+GM L+ A   DL++P++        
Sbjct: 301 MQKGLVPTKFFVDMLRIAKILKASPDCIANLEKRIGMQLDQAALEDLVMPSF-------- 352

Query: 295 NSPEHNTMHNIDVVQRIMDYFLMHEQQQQ-----------------QKQQNMGKTNVSKI 337
            S    T++++D VQRI+D+FL  +Q                      Q     T V+K+
Sbjct: 353 -SHTMETLYDVDSVQRILDHFLGTDQIMPGGVGSPCSSVDDGNLIGSPQSITPMTAVAKL 411

Query: 338 LDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
           +D YLAEVA D NL + KFQ LA S+PE AR   DGLYRAID YLK
Sbjct: 412 IDGYLAEVAPDVNLKLPKFQALAASIPEYARLLDDGLYRAIDIYLK 457

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNB3|Y5360_ARATH Putative BTB/POZ domain-containing protein At5g13600 OS=Arabidopsis thaliana GN=At5g13600 PE=3 SV=1

 Score =  246 bits (629), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/416 (36%), Positives = 227/416 (54%), Gaps = 53/416 (12%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +S+ GY+  L  + S +      +L + PGG ETF ++ KFCYG+ I   P N   LRCA
Sbjct: 47  LSRSGYLETLFSKASETTCV--AQLHDIPGGPETFLLVAKFCYGVRIEVTPENAVSLRCA 104

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVL-KSCK-NLSPWAENLQIVRRCC 118
           +E+L MSE Y D NLI  TE+FL   +  +W+++I  L KSC+  + P AE L IV RC 
Sbjct: 105 AEYLQMSENYGDANLIYLTESFLNDHVFVNWEDSIKALEKSCEPKVLPLAEELHIVSRCI 164

Query: 119 DSIAWKASRENSTT----------------------EDIANRQGWWFDDVAT-LGIDHFM 155
            S+A KA  E++T+                      +  A  + WWF+DV++ L +  + 
Sbjct: 165 GSLAMKACAEDNTSFFNWPISLPEGTTTTTIYWNGIQTKATSENWWFNDVSSFLDLPMYK 224

Query: 156 RIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEV 215
           R I T++ +G    II   + HYAK+ LP +       R  G    E      N G +++
Sbjct: 225 RFIKTVESRGVNAGIIAASVTHYAKRNLPLLGCS----RKSGSPSEEGT----NYG-DDM 275

Query: 216 SVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLED 275
               +EQR+++E +V LLP +    S KF L++L+ +MV +AS      LEKR+GM L++
Sbjct: 276 YYSHEEQRSLLEEIVELLPGKKCVTSTKFLLRLLRTSMVLHASQVTQETLEKRIGMQLDE 335

Query: 276 ANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLM-HEQQQQQKQQNMGK--- 331
           A   DLLIPN K             T+++ D VQRI+D+F++  +    +++Q MG    
Sbjct: 336 AALEDLLIPNMKYSGE---------TLYDTDSVQRILDHFMLTFDSSIVEEKQMMGDSHP 386

Query: 332 ----TNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
               T V+ ++D YLAEVA D NL ++KFQ L   +PE+ R   DG+YRAID Y+K
Sbjct: 387 LKSITKVASLIDGYLAEVASDENLKLSKFQALGALIPEDVRPMDDGIYRAIDIYIK 442

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FN09|NPY3_ARATH BTB/POZ domain-containing protein NPY3 OS=Arabidopsis thaliana GN=NPY3 PE=2 SV=1

 Score =  242 bits (617), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 217/386 (56%), Gaps = 55/386 (14%)

Query: 22  DLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81
           ++++ + PGG   FEI  KFCYG+ +  N  N+  +RCA+E+L+M E  E+GNL+ K E 
Sbjct: 71  EIRIPDIPGGPPAFEICAKFCYGMAVTLNAYNVVAVRCAAEYLEMYESIENGNLVYKMEV 130

Query: 82  FLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTE--DIANR- 138
           FL   +L SWK++I VL++ ++  PW+E++++  RC +SIA KA+ + +  +     NR 
Sbjct: 131 FLNSSVLRSWKDSIIVLQTTRSFYPWSEDVKLDVRCLESIALKAAMDPARVDWSYTYNRR 190

Query: 139 -------------QGWWFDDVATLGIDHFMRIITTIKVK-GTKPEIIGKCIMHYAKKWLP 184
                        + WW +D+A L ID F R+++TI+ K G  PE+IG+ +  YA K +P
Sbjct: 191 KLLPPEMNNNSVPRDWWVEDLAELSIDLFKRVVSTIRRKGGVLPEVIGEALEVYAAKRIP 250

Query: 185 GMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKF 244
           G                     ++     +      EQR+++E LV++LP + + VSC F
Sbjct: 251 GF--------------------MIQNDDNDDEEDVMEQRSLLETLVSMLPSEKQSVSCGF 290

Query: 245 FLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHN-TMH 303
            +++LK ++ +        EL +R+G  LE+AN  DLLI            +PE   T++
Sbjct: 291 LIKLLKSSVSFECGEEERKELSRRIGEKLEEANVGDLLI-----------RAPEGGETVY 339

Query: 304 NIDVVQRIMDYFLMHEQQQQQKQ-----QNMGKTNVSKILDNYLAEVAR-DPNLSITKFQ 357
           +ID+V+ ++D F+   +++ +        +  K NV+K++D YLAE++R + NLS TKF 
Sbjct: 340 DIDIVETLIDEFVTQTEKRDELDCSDDINDSSKANVAKLIDGYLAEISRIETNLSTTKFI 399

Query: 358 VLAESLPENARTCHDGLYRAIDTYLK 383
            +AE +    R  HDG+YRAID +LK
Sbjct: 400 TIAEKVSTFPRQSHDGVYRAIDMFLK 425

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). May play an essential role in auxin-mediated organogenesis and in root gravitropic responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q66GP0|Y5738_ARATH BTB/POZ domain-containing protein At5g67385 OS=Arabidopsis thaliana GN=At5g67385 PE=2 SV=2

 Score =  239 bits (609), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 143/405 (35%), Positives = 220/405 (54%), Gaps = 49/405 (12%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           MSKCG+I +L  + S  +    +K+ + PGGSE FE+  KFCYG+    +  NIA LRCA
Sbjct: 46  MSKCGFIKKLVSESSKDSDSTVIKIPDIPGGSEAFELAAKFCYGINFDMSTENIAMLRCA 105

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           +E+L+M+EE+   NL+ + EA+L  V L S   +ITVL   + L P AE +++V RC D+
Sbjct: 106 AEYLEMTEEHSVENLVVRAEAYLNEVALKSLSSSITVLHKSEKLLPIAERVKLVSRCIDA 165

Query: 121 IAWKASREN----------STTEDIANRQG------WWFDDVATLGIDHFMRIITTIKVK 164
           IA+   +E+             E +  +Q       WW +D+  L ID F R++  +  +
Sbjct: 166 IAYMTCQESHFCSPSSSNSGNNEVVVQQQSKQPVVDWWAEDLTVLRIDSFQRVLIAMMAR 225

Query: 165 GTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRT 224
           G K   +G  +M YA+K L G+++       +G G  +++       K+E      E+R 
Sbjct: 226 GFKQYGLGPVLMLYAQKSLRGLEI-------FGKGMKKIE------PKQE-----HEKRV 267

Query: 225 IIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIP 284
           I+E +V+LLP +   +S  F   +L+ A+    + A   +LE R+G+ L  A  +DLLIP
Sbjct: 268 ILETIVSLLPREKNAMSVSFLSMLLRAAIFLETTVACRLDLENRMGLQLGQAVLDDLLIP 327

Query: 285 NYK-NEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHEQQQQQKQQN-----MGKTNVSKIL 338
           +Y    DH         +M + D VQRI+  +L  E +  +   N          V K+L
Sbjct: 328 SYSFTGDH---------SMFDTDTVQRILMNYLEFEVEGVRLSNNGVDLAGDMERVGKLL 378

Query: 339 DNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
           +NY+AE+A D N+S+ KF  LAE +PE +R   DG+YRA+D YLK
Sbjct: 379 ENYMAEIASDRNVSLQKFIGLAELIPEQSRVTEDGMYRAVDIYLK 423

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SN21|Y3997_ARATH Putative BTB/POZ domain-containing protein At3g49970 OS=Arabidopsis thaliana GN=At3g49970 PE=3 SV=1

 Score =  230 bits (586), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/384 (35%), Positives = 217/384 (56%), Gaps = 30/384 (7%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +SKCG+I +L  + S  N    +++ +FPGG+E FE+++KFCY +    N  NIA L CA
Sbjct: 15  VSKCGFIKKLASESS--NDSNIIRIPDFPGGAEGFELVIKFCYDISFEINTENIAMLLCA 72

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           +E+L+M+EE+   NL+   E +L  VIL S  +++ VL+  ++L P AE +++V RC DS
Sbjct: 73  AEYLEMTEEHSVENLVETIEVYLNEVILKSLSKSVKVLQKSQDLLPIAERVRLVDRCIDS 132

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IA+   +E+ + EDI +   WW DD+A L ID F R++  +  +G K   +G  +  YA+
Sbjct: 133 IAYAICQESQSNEDIVD---WWADDLAVLKIDMFRRVLVAMIARGFKRYSLGPVLKLYAE 189

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGV 240
           K L G+      +R   +   +       A K E    + E+R I+E +V+LLP +   V
Sbjct: 190 KALRGL------VRFLNFLTEQCDIFGKEAKKMEAE-QEHEKRLILETIVSLLPRERNSV 242

Query: 241 SCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYK-NEDHAKLNSPEH 299
           S  F   +L+ A+    + A   +LEKR+G+ L  A  +DLLIP Y  N D         
Sbjct: 243 SVSFLSILLRAAIYLETTVACRLDLEKRMGLQLRQAVIDDLLIPYYSFNGD--------- 293

Query: 300 NTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVL 359
           NTM ++D VQRI+  +L  E +          +++ ++++ YLAE+A D N++  KF   
Sbjct: 294 NTMLDVDTVQRILMNYLEFEVEGNSAD---FASDIGELMETYLAEIASDRNINFAKFIGF 350

Query: 360 AESLPENARTCHDGLYRAIDTYLK 383
           AE +P+ +R     +YRAID +LK
Sbjct: 351 AECIPKQSR-----MYRAIDIFLK 369

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA69|Y1301_ARATH BTB/POZ domain-containing protein At1g03010 OS=Arabidopsis thaliana GN=At1g03010 PE=2 SV=1

 Score =  228 bits (581), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 219/427 (51%), Gaps = 75/427 (17%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +S+ G I +L   P ISN+     L N PGGSE FE+  KFCYG+ I  N  NIA LRCA
Sbjct: 57  VSRSGKIRKLLADPKISNVC----LSNAPGGSEAFELAAKFCYGINIEINLLNIAKLRCA 112

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           S +L+M+E++ + NL SKTE FL   I  S   +I VL  C+ L P +E+L +V R   +
Sbjct: 113 SHYLEMTEDFSEENLASKTEHFLKETIFPSILNSIIVLHHCETLIPVSEDLNLVNRLIIA 172

Query: 121 IAWKASRE-------------NSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTK 167
           +A  A +E             + T  +      WW   +A L +D F R+I+ +K KG  
Sbjct: 173 VANNACKEQLTSGLLKLDYSFSGTNIEPQTPLDWWGKSLAVLNLDFFQRVISAVKSKGLI 232

Query: 168 PEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEV--SVGQKEQRTI 225
            ++I K ++ Y  K L G+ V    L                  KE V  S G+K+QR I
Sbjct: 233 QDVISKILISYTNKSLQGLIVRDPKLE-----------------KERVLDSEGKKKQRLI 275

Query: 226 IENLVNLLPHQDE--GVSCKFFLQMLKMAMVYNASPALI---SELEKRVGMMLEDANAND 280
           +E +V LLP Q     V   F   +LKM +  ++S +     S+LE+R+G+ L+ A   D
Sbjct: 276 VETIVRLLPTQGRRSSVPMAFLSSLLKMVIATSSSASTGSCRSDLERRIGLQLDQAILED 335

Query: 281 LLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLM----------------------- 317
           +LIP         LN   +NTM++ID + RI   FL                        
Sbjct: 336 VLIP-------INLNG-TNNTMYDIDSILRIFSIFLNLDEDDEEEEHHHLQFRDETEMIY 387

Query: 318 -HEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYR 376
             +     KQ ++ K  VSK++DNYLAE+A DPNL+ +KF  LAE LP++AR   DGLYR
Sbjct: 388 DFDSPGSPKQSSILK--VSKLMDNYLAEIAMDPNLTTSKFIALAELLPDHARIISDGLYR 445

Query: 377 AIDTYLK 383
           A+D YLK
Sbjct: 446 AVDIYLK 452

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94A73|Y5656_ARATH BTB/POZ domain-containing protein At5g66560 OS=Arabidopsis thaliana GN=At5g66560 PE=2 SV=2

 Score =  226 bits (577), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/404 (34%), Positives = 216/404 (53%), Gaps = 65/404 (16%)

Query: 20  GYD-LKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISK 78
           GY  +KLE+FPG SE+FE++ KFCYG+ +  + + + PLRCA+E L+M+EEY   NLISK
Sbjct: 101 GYPHIKLEDFPGSSESFEMVAKFCYGVKMDLSASTVVPLRCAAEHLEMTEEYSPDNLISK 160

Query: 79  TEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKAS------------ 126
           TE FL+  +  S +E+I  LK+C+++SP A +L I  +C DSI  +AS            
Sbjct: 161 TERFLSHSVYKSLRESIKALKACESVSPLAGSLGITEQCIDSIVSRASSADPSLFGWPVN 220

Query: 127 ----RENSTTEDIANRQG----------------WWFDDVATLGIDHFMRIITTIKVKGT 166
               R N +  D+    G                 WF+D+  L +  F  +I +++    
Sbjct: 221 DGGGRGNISATDLQLIPGGAAKSRKKPSRDSNMELWFEDLTQLSLPIFKTVILSMRSGDL 280

Query: 167 KPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTII 226
             +II  C++ YAKK +PG+                L+ +         +V + EQR ++
Sbjct: 281 SSDIIESCLICYAKKHIPGI----------------LRSNRKPPSSSSTAVSENEQRELL 324

Query: 227 ENLVNLLPHQDEGVS--CKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIP 284
           E + + LP     +S   +F   +L+ A++ NA+      LE+++G  LE A  +DLL+P
Sbjct: 325 ETITSNLPLDKSSISSTTRFLFGLLRTAIILNAAEICRDLLERKIGSQLERATLDDLLVP 384

Query: 285 NYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFL-MHEQQQQQKQQNMGKTN----VSKILD 339
           +Y     + LN     T++++D+V+RI+ +FL   EQ      +  GK+     V K++D
Sbjct: 385 SY-----SYLN----ETLYDVDLVERILGHFLDTLEQSNTAIVEVDGKSPSLMLVGKLID 435

Query: 340 NYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
            +LAE+A D NL   KF  LA SLP+ AR   DGLYRA+D YLK
Sbjct: 436 GFLAEIASDANLKSDKFYNLAISLPDQARLYDDGLYRAVDVYLK 479

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	404
255580882	643	Root phototropism protein, putative [Ric	0.948	0.595	0.763	1e-176
224081144	540	predicted protein [Populus trichocarpa]	0.985	0.737	0.735	1e-170
429326652	637	transposase [Populus tomentosa]	0.938	0.594	0.740	1e-169
224093756	544	predicted protein [Populus trichocarpa]	0.938	0.696	0.740	1e-168
359497198	571	PREDICTED: putative BTB/POZ domain-conta	0.945	0.669	0.735	1e-168
359497580	556	PREDICTED: putative BTB/POZ domain-conta	0.910	0.661	0.705	1e-160
356528467	626	PREDICTED: putative BTB/POZ domain-conta	0.948	0.611	0.706	1e-157
296084654	489	unnamed protein product [Vitis vinifera]	0.883	0.730	0.703	1e-156
356511091	629	PREDICTED: putative BTB/POZ domain-conta	0.948	0.608	0.701	1e-156
296090702	459	unnamed protein product [Vitis vinifera]	0.883	0.777	0.697	1e-155

>gi|255580882|ref|XP_002531260.1| Root phototropism protein, putative [Ricinus communis] gi|223529145|gb|EEF31124.1| Root phototropism protein, putative [Ricinus communis]

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 294/385 (76%), Positives = 331/385 (85%), Gaps = 2/385 (0%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +SKCGYI RLELQPSISN GY+LKLENFPGGSE FEIILKFCYGLP+  NPNNIA LRCA
Sbjct: 92  VSKCGYIGRLELQPSISNFGYELKLENFPGGSEAFEIILKFCYGLPLDLNPNNIAALRCA 151

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+MSEE EDGNLISKTEAFLT V+LSSWK+TITVLKSC+ LSPWAENLQIVRRCCDS
Sbjct: 152 SEFLEMSEELEDGNLISKTEAFLTFVVLSSWKDTITVLKSCETLSPWAENLQIVRRCCDS 211

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IAWKASR+NST  +I N +GWWFDDVATL  DHFMRI+T ++ KG KPEI GKCIMHYA 
Sbjct: 212 IAWKASRDNSTVHNIINEEGWWFDDVATLRTDHFMRIVTAVRAKGAKPEITGKCIMHYAS 271

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQ-KEQRTIIENLVNLLPHQDEG 239
           +WLPGMDVELEGLRGY YGK+ELQF IL    ++  VG  KEQ+ IIE++V LLP Q E 
Sbjct: 272 RWLPGMDVELEGLRGYRYGKNELQFGILCGRNKDEGVGHSKEQKNIIESIVRLLPPQPEA 331

Query: 240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAK-LNSPE 298
           V CKF L+MLKMA+VY+ASPALISELE RVG+ LE+A+ NDLLIPNYK ED  K +  PE
Sbjct: 332 VPCKFLLKMLKMAIVYSASPALISELEMRVGLTLENASVNDLLIPNYKTEDQVKTMKHPE 391

Query: 299 HNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQV 358
           H  M+NI+VVQRI++YFLMHEQ+QQQ Q   GK+NVSK++DNYLAE+ARDPNLSITKFQV
Sbjct: 392 HCVMYNIEVVQRIVEYFLMHEQEQQQLQPMSGKSNVSKLMDNYLAEIARDPNLSITKFQV 451

Query: 359 LAESLPENARTCHDGLYRAIDTYLK 383
           LAE LPENARTC DGLYR+IDTYLK
Sbjct: 452 LAEVLPENARTCDDGLYRSIDTYLK 476

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081144|ref|XP_002306309.1| predicted protein [Populus trichocarpa] gi|222855758|gb|EEE93305.1| predicted protein [Populus trichocarpa]

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 295/401 (73%), Positives = 336/401 (83%), Gaps = 3/401 (0%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +SK  YI RLE+QPSISN GY+LKLENFPGG E FEIILKFCYGL +  NP+NIAPLRCA
Sbjct: 27  VSKSSYIGRLEIQPSISNFGYELKLENFPGGPEAFEIILKFCYGLTLDLNPSNIAPLRCA 86

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+MSEE +DGNLISKTEAFLT V+LSSWK+TITVLKSC+ LSPWAENLQIVRRCCDS
Sbjct: 87  SEFLEMSEELDDGNLISKTEAFLTFVVLSSWKDTITVLKSCETLSPWAENLQIVRRCCDS 146

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IAWKASR+NST  D  N +G WFDDVA+L IDHFMRIIT I  +GTKPEIIGKCIM YA+
Sbjct: 147 IAWKASRDNSTIGDTVNDEGCWFDDVASLRIDHFMRIITAIGARGTKPEIIGKCIMQYAE 206

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQ-KEQRTIIENLVNLLPHQDEG 239
           +WLPGMDVELEG RGYGYGK+ELQFSIL   KE+  +   +EQ++IIE+LV++LP Q   
Sbjct: 207 RWLPGMDVELEGPRGYGYGKNELQFSILIGRKEDEGIEHSQEQKSIIESLVSILPPQPGA 266

Query: 240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAK-LNSPE 298
           V CKF L+MLKMAMVY+AS ALISELEKRVGMMLE+AN NDLLIPNYK ED  K +NS E
Sbjct: 267 VPCKFLLKMLKMAMVYSASQALISELEKRVGMMLENANVNDLLIPNYKREDQGKFVNSLE 326

Query: 299 HNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQV 358
           H TMH+I+V+QRI++YFLMHEQ+QQQ  Q  GK++VSK+LD+YL EVA+DPNLSITKFQV
Sbjct: 327 HRTMHDIEVIQRIVEYFLMHEQEQQQLPQTTGKSSVSKLLDSYLTEVAKDPNLSITKFQV 386

Query: 359 LAESLPENARTCHDGLYRAIDTYLKPIVFFS-HIRHYLNMI 398
           LAE+LPE ARTC DGLY AIDTYLK     S H R  L  I
Sbjct: 387 LAEALPEKARTCDDGLYGAIDTYLKAHPLLSEHDRKRLCRI 427

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|429326652|gb|AFZ78666.1| transposase [Populus tomentosa]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 285/385 (74%), Positives = 329/385 (85%), Gaps = 6/385 (1%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +SKCGYI RLELQPSISN GY+LKLENFPGGSE F+IILKFCYGLP+  NP+N APLRCA
Sbjct: 90  VSKCGYIGRLELQPSISNFGYELKLENFPGGSEAFKIILKFCYGLPLDLNPSNSAPLRCA 149

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+MSEE +DGNLISKTEAFLT V+LSSWK+TITVLKSC+ LSPWAENLQIVRRCCDS
Sbjct: 150 SEFLEMSEEIDDGNLISKTEAFLTFVVLSSWKDTITVLKSCETLSPWAENLQIVRRCCDS 209

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IAWKA R+NS    + N +GW FDDVA+L IDHFMRIIT I+ +G KPEIIGKCIM YA 
Sbjct: 210 IAWKAPRDNS----MVNDEGWCFDDVASLRIDHFMRIITAIRARGAKPEIIGKCIMRYAD 265

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQ-KEQRTIIENLVNLLPHQDEG 239
           +WLPGMD ELEGLRGYGYGK+ELQFSIL   KE+  +   KEQ++IIE+LV++LP Q E 
Sbjct: 266 RWLPGMDAELEGLRGYGYGKNELQFSILIGRKEDEGIEHSKEQKSIIESLVSILPSQPEA 325

Query: 240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKL-NSPE 298
             CKF L+MLKMAMVY+AS ALI+ELEKR GMMLE+AN NDLLIPNYK+ED  K+  S E
Sbjct: 326 APCKFLLKMLKMAMVYSASQALIAELEKRAGMMLENANVNDLLIPNYKSEDQGKMVKSLE 385

Query: 299 HNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQV 358
             TMHN DVVQR+++YFLMHEQ++QQ     GK++VSK+L+NYLAEVA+DPNLSITKFQV
Sbjct: 386 KQTMHNTDVVQRMVEYFLMHEQEKQQLPPTSGKSSVSKLLENYLAEVAKDPNLSITKFQV 445

Query: 359 LAESLPENARTCHDGLYRAIDTYLK 383
           LA++LPE AR+C DGLYRAIDTYLK
Sbjct: 446 LADALPERARSCDDGLYRAIDTYLK 470

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093756|ref|XP_002309978.1| predicted protein [Populus trichocarpa] gi|222852881|gb|EEE90428.1| predicted protein [Populus trichocarpa]

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 285/385 (74%), Positives = 329/385 (85%), Gaps = 6/385 (1%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +SKCGYI RLELQPSISN GY+LKLENFPGGSE F+IILKFCYGLP+  NP+N APLRCA
Sbjct: 35  VSKCGYIGRLELQPSISNFGYELKLENFPGGSEAFKIILKFCYGLPLDLNPSNSAPLRCA 94

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+MSEE +DGNLISKTEAFLT V+LSSWK+TITVLKSC+ LSPWAENLQIVRRCCDS
Sbjct: 95  SEFLEMSEEIDDGNLISKTEAFLTFVVLSSWKDTITVLKSCETLSPWAENLQIVRRCCDS 154

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IAWKA R+NS    + N +GW FDDVA+L IDHFMRIIT I+ +G KPEIIGKCIM YA 
Sbjct: 155 IAWKAPRDNS----MVNDEGWCFDDVASLRIDHFMRIITAIRARGAKPEIIGKCIMRYAD 210

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQ-KEQRTIIENLVNLLPHQDEG 239
           +WLPGMD ELEGLRGYGYGK+ELQFSIL   KE+  +   KEQ++IIE+LV++LP Q E 
Sbjct: 211 RWLPGMDAELEGLRGYGYGKNELQFSILIGRKEDEGIEHSKEQKSIIESLVSILPSQPEA 270

Query: 240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKL-NSPE 298
             CKF L+MLKMAMVY+AS ALI+ELEKR GMMLE+AN NDLLIPNYK+ED  K+  S E
Sbjct: 271 APCKFLLKMLKMAMVYSASQALIAELEKRAGMMLENANVNDLLIPNYKSEDQGKMVKSLE 330

Query: 299 HNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQV 358
             TMHN DVVQR+++YFLMHEQ++QQ     GK++VSK+L+NYLAEVA+DPNLSITKFQV
Sbjct: 331 KQTMHNTDVVQRMVEYFLMHEQEKQQLPPTSGKSSVSKLLENYLAEVAKDPNLSITKFQV 390

Query: 359 LAESLPENARTCHDGLYRAIDTYLK 383
           LA++LPE AR+C DGLYRAIDTYLK
Sbjct: 391 LADALPERARSCDDGLYRAIDTYLK 415

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497198|ref|XP_002262774.2| PREDICTED: putative BTB/POZ domain-containing protein DOT3-like, partial [Vitis vinifera]

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 283/385 (73%), Positives = 330/385 (85%), Gaps = 3/385 (0%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +S+CGYI+++ELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP+  NPNN A LRCA
Sbjct: 75  VSRCGYISQIELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPVDLNPNNAASLRCA 134

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+M+EE ++GNLISKTE FLT V+LSSW+++ITVLKSC+NLSPWAENLQIVRRCCDS
Sbjct: 135 SEFLEMTEELDEGNLISKTEVFLTFVVLSSWRDSITVLKSCENLSPWAENLQIVRRCCDS 194

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IAWKAS++NSTT +  + + WWFDDVATL IDHFMRI+TT + KG KPEIIG CIMHYA+
Sbjct: 195 IAWKASQDNSTTGETISEEHWWFDDVATLRIDHFMRIMTTARAKGLKPEIIGSCIMHYAE 254

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQ-KEQRTIIENLVNLLPHQDEG 239
           KWLPGMDV LEG R +G GK+ELQ SIL+  ++E  VG  KE + IIE+LV++LP + E 
Sbjct: 255 KWLPGMDVALEGPRAFGCGKNELQLSILSGRRQEGGVGHNKELKMIIESLVSILPPEKEA 314

Query: 240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKL-NSPE 298
           VSCKF LQMLKM++VY+A+  L+SELEKRVGM+L+DAN NDLLIP Y+N D  KL NS E
Sbjct: 315 VSCKFLLQMLKMSVVYSATQVLVSELEKRVGMVLQDANVNDLLIPTYRNGDQGKLVNSSE 374

Query: 299 HNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQV 358
             TMH+ID VQRI++YFLMHEQQQ   Q    K NVSK+LDNYLAE+ARDPNLSITKF V
Sbjct: 375 ELTMHDIDAVQRIVEYFLMHEQQQPH-QHKSSKLNVSKLLDNYLAEIARDPNLSITKFHV 433

Query: 359 LAESLPENARTCHDGLYRAIDTYLK 383
           LAE+LPENARTCHDGLYRAIDTYLK
Sbjct: 434 LAEALPENARTCHDGLYRAIDTYLK 458

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497580|ref|XP_003635572.1| PREDICTED: putative BTB/POZ domain-containing protein DOT3-like, partial [Vitis vinifera]

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 271/384 (70%), Positives = 319/384 (83%), Gaps = 16/384 (4%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +S+CGYI+++ELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP+  NPNN A LRCA
Sbjct: 44  VSRCGYISQIELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPVDLNPNNAASLRCA 103

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+M+EE ++GNLISKTEAFLT V+LSSW+++ITVLKSC+NLSPWAENLQI+RRCCDS
Sbjct: 104 SEFLEMTEELDEGNLISKTEAFLTFVVLSSWRDSITVLKSCENLSPWAENLQIIRRCCDS 163

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IAWKAS++NSTT +  + +GWWFDDVATL IDHF RI+T  + KG KPEIIG CIMHYA+
Sbjct: 164 IAWKASQDNSTTGETISEEGWWFDDVATLRIDHFTRIMTAARAKGLKPEIIGSCIMHYAE 223

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQ-KEQRTIIENLVNLLPHQDEG 239
           KWLPGMDV LEG R +GYGK+ELQ SIL+  ++E  VG  KE + IIE+LV++LP + E 
Sbjct: 224 KWLPGMDVALEGPRAFGYGKNELQLSILSGRRQEGGVGHNKELKMIIESLVSILPPEKEA 283

Query: 240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEH 299
           VSCKF L MLKM++VY+A+  L+SELEKRVGM+L+DAN NDLLIP Y+N D  KL     
Sbjct: 284 VSCKFLLWMLKMSVVYSATQVLVSELEKRVGMVLQDANVNDLLIPTYRNGDQGKL----- 338

Query: 300 NTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVL 359
                     +I++YFLMHEQQQ   Q    K NVSK+LDNYLAE+ARDPNLSITKF VL
Sbjct: 339 ---------VKIVEYFLMHEQQQPH-QHKSSKLNVSKLLDNYLAEIARDPNLSITKFHVL 388

Query: 360 AESLPENARTCHDGLYRAIDTYLK 383
           AE+LPENARTCHDGLYRAIDTYLK
Sbjct: 389 AETLPENARTCHDGLYRAIDTYLK 412

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528467|ref|XP_003532824.1| PREDICTED: putative BTB/POZ domain-containing protein DOT3-like [Glycine max]

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 275/389 (70%), Positives = 322/389 (82%), Gaps = 6/389 (1%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +SKCGYI RLE+QP ISN G  L LENFPGGSETFE ILKFCYGLPI F+P+NIA LRCA
Sbjct: 70  ISKCGYIGRLEIQPLISNSGNVLNLENFPGGSETFETILKFCYGLPIDFSPDNIAALRCA 129

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+M+EE EDGNLISK+EAFLT V+LSSWK+TITVLKS +NLSPWAENLQIVRRCCDS
Sbjct: 130 SEFLEMTEELEDGNLISKSEAFLTFVVLSSWKDTITVLKSSENLSPWAENLQIVRRCCDS 189

Query: 121 IAWKASRENSTTEDIA-NRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYA 179
           IAWKAS++  T+ED A N++ WWF+DVA   IDHFMRII+ I+ KGTKPE IGKCIM YA
Sbjct: 190 IAWKASKDELTSEDAAPNQESWWFNDVAAFRIDHFMRIISAIRAKGTKPETIGKCIMQYA 249

Query: 180 KKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEG 239
           K+WLPGM+VELEGLRGYG+ K  LQFSI +  K+E S   KEQRTIIE+L++++P Q + 
Sbjct: 250 KRWLPGMEVELEGLRGYGHEKCNLQFSIFSGKKKESSGNSKEQRTIIESLISIIPPQQDA 309

Query: 240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAK-----L 294
           VSCKF LQ+LKMAM+Y+ SPAL ++LEKRV ++LEDA  +DLLIP Y+N D  K      
Sbjct: 310 VSCKFMLQLLKMAMMYSVSPALTTDLEKRVSLVLEDAEVSDLLIPRYQNGDQGKTVICMT 369

Query: 295 NSPEHNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSIT 354
           NS E  TM +IDVVQRI++YFLMHEQQQ Q+QQ   K N+S++LDNYLAE+ARDPNLSIT
Sbjct: 370 NSSEECTMLDIDVVQRIVEYFLMHEQQQIQQQQKTRKFNISRLLDNYLAEIARDPNLSIT 429

Query: 355 KFQVLAESLPENARTCHDGLYRAIDTYLK 383
           KFQV AE LPEN R+  DGLYRAIDTYLK
Sbjct: 430 KFQVFAELLPENTRSYDDGLYRAIDTYLK 458

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084654|emb|CBI25777.3| unnamed protein product [Vitis vinifera]

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/384 (70%), Positives = 313/384 (81%), Gaps = 27/384 (7%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +S+CGYI+++ELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP+  NPNN A LRCA
Sbjct: 75  VSRCGYISQIELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPVDLNPNNAASLRCA 134

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+M+EE ++GNLISKTE FLT V+LSSW+++ITVLKSC+NLSPWAENLQIVRRCCDS
Sbjct: 135 SEFLEMTEELDEGNLISKTEVFLTFVVLSSWRDSITVLKSCENLSPWAENLQIVRRCCDS 194

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IAWKAS++NSTT +  + + WWFDDVATL IDHFMRI+TT + KG KPEIIG CIMHYA+
Sbjct: 195 IAWKASQDNSTTGETISEEHWWFDDVATLRIDHFMRIMTTARAKGLKPEIIGSCIMHYAE 254

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGV 240
           KWLPGMD   EG  G G+                     KE + IIE+LV++LP + E V
Sbjct: 255 KWLPGMD---EG--GVGHN--------------------KELKMIIESLVSILPPEKEAV 289

Query: 241 SCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKL-NSPEH 299
           SCKF LQMLKM++VY+A+  L+SELEKRVGM+L+DAN NDLLIP Y+N D  KL NS E 
Sbjct: 290 SCKFLLQMLKMSVVYSATQVLVSELEKRVGMVLQDANVNDLLIPTYRNGDQGKLVNSSEE 349

Query: 300 NTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVL 359
            TMH+ID VQRI++YFLMHEQQQ   Q    K NVSK+LDNYLAE+ARDPNLSITKF VL
Sbjct: 350 LTMHDIDAVQRIVEYFLMHEQQQPH-QHKSSKLNVSKLLDNYLAEIARDPNLSITKFHVL 408

Query: 360 AESLPENARTCHDGLYRAIDTYLK 383
           AE+LPENARTCHDGLYRAIDTYLK
Sbjct: 409 AEALPENARTCHDGLYRAIDTYLK 432

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511091|ref|XP_003524263.1| PREDICTED: putative BTB/POZ domain-containing protein DOT3-like [Glycine max]

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/388 (70%), Positives = 322/388 (82%), Gaps = 5/388 (1%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +SKCGYI +LE+QP ISN G  LKLENFPGGSETFE ILKFCYGLPI F+P+NIA LRCA
Sbjct: 74  ISKCGYIGQLEIQPLISNSGNVLKLENFPGGSETFETILKFCYGLPIDFSPDNIAALRCA 133

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+M+EE EDGNLISK+EAFLT V+LSSWK+TITVLKSC+NLSPWAENLQIVRRCCDS
Sbjct: 134 SEFLEMTEELEDGNLISKSEAFLTFVVLSSWKDTITVLKSCENLSPWAENLQIVRRCCDS 193

Query: 121 IAWKASRENSTTEDIA-NRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYA 179
           IAWKAS++  T+ED   N++ WWF+DVA   IDHFM+II+ I+ KGTKPE IGKCI+ YA
Sbjct: 194 IAWKASKDELTSEDATPNQESWWFNDVAAFRIDHFMQIISAIRAKGTKPETIGKCIIQYA 253

Query: 180 KKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEG 239
           K+WLPGM+VELEGLRGYG+ K  LQFSI +  K+E S   KEQ+TIIE+L++++P Q + 
Sbjct: 254 KRWLPGMEVELEGLRGYGHEKCNLQFSIFSGKKKESSGHSKEQKTIIESLISIIPPQQDA 313

Query: 240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLN---- 295
           VSCKF LQMLKMAM+Y+ SPAL ++LEKRV ++LEDA  +DLLIP Y+N D  K      
Sbjct: 314 VSCKFMLQMLKMAMMYSVSPALTTDLEKRVSLVLEDAEVSDLLIPRYQNGDQGKTVIMTI 373

Query: 296 SPEHNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITK 355
           S E  TM +IDVVQRI++YFLMHEQQQ Q+QQ   K N+S++LDNYLAE+ARDPNLSITK
Sbjct: 374 SSEECTMLDIDVVQRIVEYFLMHEQQQIQQQQKTRKFNISRLLDNYLAEIARDPNLSITK 433

Query: 356 FQVLAESLPENARTCHDGLYRAIDTYLK 383
           FQV AE LPEN R+  DGLYRAIDTYLK
Sbjct: 434 FQVFAEFLPENTRSYDDGLYRAIDTYLK 461

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090702|emb|CBI41104.3| unnamed protein product [Vitis vinifera]

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/384 (69%), Positives = 312/384 (81%), Gaps = 27/384 (7%)

Query: 1   MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
           +S+CGYI+++ELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP+  NPNN A LRCA
Sbjct: 45  VSRCGYISQIELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPVDLNPNNAASLRCA 104

Query: 61  SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
           SEFL+M+EE ++GNLISKTEAFLT V+LSSW+++ITVLKSC+NLSPWAENLQI+RRCCDS
Sbjct: 105 SEFLEMTEELDEGNLISKTEAFLTFVVLSSWRDSITVLKSCENLSPWAENLQIIRRCCDS 164

Query: 121 IAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAK 180
           IAWKAS++NSTT +  + +GWWFDDVATL IDHF RI+T  + KG KPEIIG CIMHYA+
Sbjct: 165 IAWKASQDNSTTGETISEEGWWFDDVATLRIDHFTRIMTAARAKGLKPEIIGSCIMHYAE 224

Query: 181 KWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGV 240
           KWLPGMD   EG  G G+                     KE + IIE+LV++LP + E V
Sbjct: 225 KWLPGMD---EG--GVGHN--------------------KELKMIIESLVSILPPEKEAV 259

Query: 241 SCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKL-NSPEH 299
           SCKF L MLKM++VY+A+  L+SELEKRVGM+L+DAN NDLLIP Y+N D  KL NS E 
Sbjct: 260 SCKFLLWMLKMSVVYSATQVLVSELEKRVGMVLQDANVNDLLIPTYRNGDQGKLVNSSEE 319

Query: 300 NTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVL 359
            TMH+ID VQRI++YFLMHEQQQ   Q    K NVSK+LDNYLAE+ARDPNLSITKF VL
Sbjct: 320 LTMHDIDAVQRIVEYFLMHEQQQPH-QHKSSKLNVSKLLDNYLAEIARDPNLSITKFHVL 378

Query: 360 AESLPENARTCHDGLYRAIDTYLK 383
           AE+LPENARTCHDGLYRAIDTYLK
Sbjct: 379 AETLPENARTCHDGLYRAIDTYLK 402

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	404
TAIR|locus:2145387	607	DOT3 "DEFECTIVELY ORGANIZED TR	0.752	0.500	0.593	9.4e-122
TAIR|locus:2173418	746	NPH3 "NON-PHOTOTROPIC HYPOCOTY	0.254	0.138	0.640	3.5e-91
TAIR|locus:2028160	665	AT1G30440 [Arabidopsis thalian	0.606	0.368	0.348	3.7e-60
TAIR|locus:2200286	631	AT1G67900 [Arabidopsis thalian	0.720	0.461	0.340	5.4e-59
TAIR|locus:2173204	591	AT5G13600 [Arabidopsis thalian	0.898	0.614	0.375	2.8e-57
TAIR|locus:504954965	604	AT5G67385 [Arabidopsis thalian	0.881	0.589	0.358	3.3e-56
TAIR|locus:2158182	579	NPY3 "NAKED PINS IN YUC MUTANT	0.356	0.248	0.368	1.6e-53
TAIR|locus:2143558	592	AT5G03250 [Arabidopsis thalian	0.579	0.395	0.308	8.2e-53
TAIR|locus:2082132	651	AT3G44820 [Arabidopsis thalian	0.621	0.385	0.304	9.9e-53
TAIR|locus:2077763	617	AT3G08570 [Arabidopsis thalian	0.886	0.580	0.341	1.3e-50

TAIR|locus:2145387 DOT3 "DEFECTIVELY ORGANIZED TRIBUTARIES 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 978 (349.3 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
 Identities = 191/322 (59%), Positives = 247/322 (76%)

Query:     1 MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
             +SKCGYI+ +EL+PS S  GY LKLENFPGG++TFE ILKFCY LP+  NP N+APLRCA
Sbjct:    71 ISKCGYISSIELKPSTSENGYHLKLENFPGGADTFETILKFCYNLPLDLNPLNVAPLRCA 130

Query:    61 SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
             SE+L M+EE+E GNLISKTEAF+T V+L+SW++T+TVL+SC NLSPWAENLQIVRRCCD 
Sbjct:   131 SEYLYMTEEFEAGNLISKTEAFITFVVLASWRDTLTVLRSCTNLSPWAENLQIVRRCCDL 190

Query:   121 IAWKASRENSTTEDIANR-QGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYA 179
             +AWKA  +N+  ED+ +R +   ++D+ATL IDHFMR+ITT+K +  KP+I GK IM YA
Sbjct:   191 LAWKACNDNNIPEDVVDRNERCLYNDIATLDIDHFMRVITTMKARRAKPQITGKIIMKYA 250

Query:   180 KKWLPGMDVELEGLRGYGYGKHELQFSILNAGK--EEVSVGQKEQRTIIENLVNLLPHQD 237
               +LP ++ +LEG++GYG GK+ELQFS+ N G+  E  S+G +E +  IE+LV++LP Q 
Sbjct:   251 DNFLPVINDDLEGIKGYGLGKNELQFSV-NRGRMEESNSLGCQEHKETIESLVSVLPPQS 309

Query:   238 EGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSP 297
               VSC F L+MLK ++VY+ASPALIS+LEKRVGM LEDAN  DLLIPN+KNE+  +    
Sbjct:   310 GAVSCHFLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEEQQER--- 366

Query:   298 EHNTMHNIDVVQRIMDYFLMHE 319
                         RI ++FLMHE
Sbjct:   367 -----------VRIFEFFLMHE 377

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

GO:0010087 "phloem or xylem histogenesis" evidence=IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0010588 "cotyledon vascular tissue pattern formation" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

GO:0080022 "primary root development" evidence=IMP

TAIR|locus:2173418 NPH3 "NON-PHOTOTROPIC HYPOCOTYL 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 3.5e-91, Sum P(4) = 3.5e-91
 Identities = 66/103 (64%), Positives = 85/103 (82%)

Query:    23 LKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAF 82
             L L++ PGG E FE+  KFCYG+P+     NI+ LRCA+E+L+M+E+ E+GNLI KTEAF
Sbjct:    94 LILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTEAF 153

Query:    83 LTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKA 125
             L+ V+LSSW+++I VLKSC+ LSPWAENLQIVRRC +SIAWKA
Sbjct:   154 LSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKA 196

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA;NAS

GO:0009416 "response to light stimulus" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0009785 "blue light signaling pathway" evidence=IGI;IPI

GO:0016567 "protein ubiquitination" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0009638 "phototropism" evidence=IMP

TAIR|locus:2028160 AT1G30440 [Arabidopsis thaliana (taxid:3702)]

 Score = 371 (135.7 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
 Identities = 98/281 (34%), Positives = 148/281 (52%)

Query:   120 SIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYA 179
             S+ W      +  +  ++   WW++D + L    F R+IT ++ +G + +II   + +Y 
Sbjct:   196 SVLWNGISTGARPKHTSS--DWWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYT 253

Query:   180 KKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEG 239
             +K LPG+     G    G      +FS    G   V + ++EQ+ ++E +  LL  Q   
Sbjct:   254 RKHLPGLKRRRGGPESSG------RFST-PLGSGNV-LSEEEQKNLLEEIQELLRMQKGL 305

Query:   240 VSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEH 299
             V  KFF+ ML++A +  ASP  I+ LEKR+GM L+ A   DL++P++    H        
Sbjct:   306 VPTKFFVDMLRIAKILKASPDCIANLEKRIGMQLDQAALEDLVMPSFS---HTM------ 356

Query:   300 NTMHNIDVVQRIMDYFLMHEXX---------XXXXXXNM-GK-------TNVSKILDNYL 342
              T++++D VQRI+D+FL  +                 N+ G        T V+K++D YL
Sbjct:   357 ETLYDVDSVQRILDHFLGTDQIMPGGVGSPCSSVDDGNLIGSPQSITPMTAVAKLIDGYL 416

Query:   343 AEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
             AEVA D NL + KFQ LA S+PE AR   DGLYRAID YLK
Sbjct:   417 AEVAPDVNLKLPKFQALAASIPEYARLLDDGLYRAIDIYLK 457

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2200286 AT1G67900 [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
 Identities = 115/338 (34%), Positives = 183/338 (54%)

Query:     1 MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
             +SKC  + R+    S  ++   ++L  FPGG E FE+  KFCYG+ I  +  NI   RCA
Sbjct:    47 LSKCLRLQRM-CSESPESI---IQLPEFPGGVEAFELCAKFCYGITITISAYNIVAARCA 102

Query:    61 SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
             +E+L MSEE E GNL+ K E F    IL+ W+++I  L++ K    W+E+L I  RC ++
Sbjct:   103 AEYLQMSEEVEKGNLVYKLEVFFNSCILNGWRDSIVTLQTTKAFPLWSEDLAITSRCIEA 162

Query:   121 IAWKA-------------SR-----ENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIK 162
             IA K              SR     + S+    A+ +GWW +D+A LGID + R +  IK
Sbjct:   163 IASKVLSHPSKVSLSHSHSRRVRDDDMSSNRAAASSRGWWAEDIAELGIDLYWRTMIAIK 222

Query:   163 VKGTKP-EIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKE 221
               G  P  +IG  +  YA KWLP +    + ++     K E      ++  +  +    +
Sbjct:   223 SGGKVPASLIGDALRVYASKWLPTLQRNRKVVK-----KKE------DSDSDSDTDTSSK 271

Query:   222 QRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDL 281
              R ++E++++LLP +   VSC F L++LK A + NAS +   EL +RV + LE+A  +DL
Sbjct:   272 HRLLLESIISLLPAEKGAVSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDL 331

Query:   282 LIP--NYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLM 317
             LIP  +YK+E            ++++D+V  I++ F++
Sbjct:   332 LIPPMSYKSE-----------LLYDVDIVATILEQFMV 358

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2173204 AT5G13600 [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 156/416 (37%), Positives = 225/416 (54%)

Query:     1 MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
             +S+ GY+  L  + S +      +L + PGG ETF ++ KFCYG+ I   P N   LRCA
Sbjct:    47 LSRSGYLETLFSKASETTCV--AQLHDIPGGPETFLLVAKFCYGVRIEVTPENAVSLRCA 104

Query:    61 SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVL-KSCK-NLSPWAENLQIVRRCC 118
             +E+L MSE Y D NLI  TE+FL   +  +W+++I  L KSC+  + P AE L IV RC 
Sbjct:   105 AEYLQMSENYGDANLIYLTESFLNDHVFVNWEDSIKALEKSCEPKVLPLAEELHIVSRCI 164

Query:   119 DSIAWKASRENST--------------TEDI--------ANRQGWWFDDVAT-LGIDHFM 155
              S+A KA  E++T              T  I        A  + WWF+DV++ L +  + 
Sbjct:   165 GSLAMKACAEDNTSFFNWPISLPEGTTTTTIYWNGIQTKATSENWWFNDVSSFLDLPMYK 224

Query:   156 RIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEV 215
             R I T++ +G    II   + HYAK+ LP +       R  G    E      N G +++
Sbjct:   225 RFIKTVESRGVNAGIIAASVTHYAKRNLPLLGCS----RKSGSPSEEGT----NYG-DDM 275

Query:   216 SVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLED 275
                 +EQR+++E +V LLP +    S KF L++L+ +MV +AS      LEKR+GM L++
Sbjct:   276 YYSHEEQRSLLEEIVELLPGKKCVTSTKFLLRLLRTSMVLHASQVTQETLEKRIGMQLDE 335

Query:   276 ANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLM-HEXXXXXXXXNMGK--- 331
             A   DLLIPN K        S E  T+++ D VQRI+D+F++  +         MG    
Sbjct:   336 AALEDLLIPNMKY-------SGE--TLYDTDSVQRILDHFMLTFDSSIVEEKQMMGDSHP 386

Query:   332 ----TNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
                 T V+ ++D YLAEVA D NL ++KFQ L   +PE+ R   DG+YRAID Y+K
Sbjct:   387 LKSITKVASLIDGYLAEVASDENLKLSKFQALGALIPEDVRPMDDGIYRAIDIYIK 442

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IDA

TAIR|locus:504954965 AT5G67385 [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 145/405 (35%), Positives = 220/405 (54%)

Query:     1 MSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCA 60
             MSKCG+I +L  + S  +    +K+ + PGGSE FE+  KFCYG+    +  NIA LRCA
Sbjct:    46 MSKCGFIKKLVSESSKDSDSTVIKIPDIPGGSEAFELAAKFCYGINFDMSTENIAMLRCA 105

Query:    61 SEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDS 120
             +E+L+M+EE+   NL+ + EA+L  V L S   +ITVL   + L P AE +++V RC D+
Sbjct:   106 AEYLEMTEEHSVENLVVRAEAYLNEVALKSLSSSITVLHKSEKLLPIAERVKLVSRCIDA 165

Query:   121 IAWKASRE---------NSTTEDIANRQ-------GWWFDDVATLGIDHFMRIITTIKVK 164
             IA+   +E         NS   ++  +Q        WW +D+  L ID F R++  +  +
Sbjct:   166 IAYMTCQESHFCSPSSSNSGNNEVVVQQQSKQPVVDWWAEDLTVLRIDSFQRVLIAMMAR 225

Query:   165 GTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRT 224
             G K   +G  +M YA+K L G+++       +G G  +++       K+E      E+R 
Sbjct:   226 GFKQYGLGPVLMLYAQKSLRGLEI-------FGKGMKKIE------PKQE-----HEKRV 267

Query:   225 IIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIP 284
             I+E +V+LLP +   +S  F   +L+ A+    + A   +LE R+G+ L  A  +DLLIP
Sbjct:   268 ILETIVSLLPREKNAMSVSFLSMLLRAAIFLETTVACRLDLENRMGLQLGQAVLDDLLIP 327

Query:   285 NYK-NEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHEXXXXXXXXN----MGKTN-VSKIL 338
             +Y    DH+         M + D VQRI+  +L  E        N     G    V K+L
Sbjct:   328 SYSFTGDHS---------MFDTDTVQRILMNYLEFEVEGVRLSNNGVDLAGDMERVGKLL 378

Query:   339 DNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
             +NY+AE+A D N+S+ KF  LAE +PE +R   DG+YRA+D YLK
Sbjct:   379 ENYMAEIASDRNVSLQKFIGLAELIPEQSRVTEDGMYRAVDIYLK 423

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2158182 NPY3 "NAKED PINS IN YUC MUTANTS 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
 Identities = 59/160 (36%), Positives = 99/160 (61%)

Query:    22 DLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81
             ++++ + PGG   FEI  KFCYG+ +  N  N+  +RCA+E+L+M E  E+GNL+ K E 
Sbjct:    71 EIRIPDIPGGPPAFEICAKFCYGMAVTLNAYNVVAVRCAAEYLEMYESIENGNLVYKMEV 130

Query:    82 FLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTE-------- 133
             FL   +L SWK++I VL++ ++  PW+E++++  RC +SIA KA+ + +  +        
Sbjct:   131 FLNSSVLRSWKDSIIVLQTTRSFYPWSEDVKLDVRCLESIALKAAMDPARVDWSYTYNRR 190

Query:   134 -----DIANR---QGWWFDDVATLGIDHFMRIITTIKVKG 165
                  ++ N    + WW +D+A L ID F R+++TI+ KG
Sbjct:   191 KLLPPEMNNNSVPRDWWVEDLAELSIDLFKRVVSTIRRKG 230

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

GO:0009908 "flower development" evidence=IGI

GO:0009958 "positive gravitropism" evidence=IGI

GO:0071944 "cell periphery" evidence=IDA

TAIR|locus:2143558 AT5G03250 [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 8.2e-53, Sum P(2) = 8.2e-53
 Identities = 86/279 (30%), Positives = 146/279 (52%)

Query:   139 QGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGY 198
             + WWFDD + L +  F R+IT I+ +G K E I   +M+Y +K +P M+ ++        
Sbjct:   216 EDWWFDDASFLSLPLFKRLITAIEARGMKLENIAMAVMYYTRKHVPLMNRQVN------- 268

Query:   199 GKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVS-CKFFLQMLKMAMVYNA 257
                 +   ++    E  +  +++Q+T +E +V LLP + +GV+  KF L++L+ AMV +A
Sbjct:   269 ----MDEQVI----ETPNPSEEDQKTCLEEIVGLLPSK-KGVNPTKFLLRLLQTAMVLHA 319

Query:   258 SPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYF-- 315
             S +    LE+R+G  L+ A   DLLIPN    +          T+++++ V R+++ F  
Sbjct:   320 SQSSRENLERRIGNQLDQAALVDLLIPNMGYSE----------TLYDVECVLRMIEQFVS 369

Query:   316 ------------LMHEXXXXXXXXNM--GKTNVSKILDNYLAEVARDPNLSITKFQVLAE 361
                         ++ E        ++    T V+ ++D YLAEVA D NL + KF+ +A 
Sbjct:   370 STEQAGIVPSPCIIEEGHLVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLAKFEAIAA 429

Query:   362 SLPENARTCHDGLYRAIDTYLK--PIVFFSHIRHYLNMI 398
             ++P+ AR   DG+Y AID YLK  P +  S   H   ++
Sbjct:   430 AIPDYARPLDDGVYHAIDVYLKAHPWITDSEREHICRLM 468

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2082132 AT3G44820 [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 9.9e-53, Sum P(2) = 9.9e-53
 Identities = 85/279 (30%), Positives = 144/279 (51%)

Query:   120 SIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYA 179
             SI W     N+     ++   WW++D++ L +D F R+I T++ KG + E +   +M+YA
Sbjct:   193 SILWNGI--NTGARMRSSGSDWWYEDISYLSVDLFKRLIKTMETKGIRAESLAGAMMYYA 250

Query:   180 KKWLPGMDVELEGLRGYGYGKHEL-QFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDE 238
             +K+LPG+     G       +  +  F++  A     S+   +Q  ++E +++LLP +  
Sbjct:   251 RKYLPGLGRWQSGTSDSSKSRRRVVSFNLAKASSPS-SMPPLDQIALLETILSLLPEKRG 309

Query:   239 GVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPE 298
                CKF L +L++A +       + +LEKR+GM LE A  ++LLI NY + +        
Sbjct:   310 RSFCKFLLGLLRVAFILGVDGNCVKKLEKRIGMQLELATLDNLLILNYSDSE-------- 361

Query:   299 HNTMHNIDVVQRIMDYFLMHEXXXXXXXXNMGKTN--------------VSKILDNYLAE 344
               T++N+D V+RI+ +F+                +              V+ ++D+Y+AE
Sbjct:   362 --TLYNVDCVERIVRHFVSSLSSSSSQLPEFSPPSLDPVTSPSPAPLKKVANLVDSYMAE 419

Query:   345 VARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
             VA D NL   K + LA +LPE++R  +DGLYRA D Y K
Sbjct:   420 VASDVNLKPDKMRSLAAALPESSRPLYDGLYRAFDIYFK 458

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2077763 AT3G08570 [Arabidopsis thaliana (taxid:3702)]

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 140/410 (34%), Positives = 229/410 (55%)

Query:     1 MSKCGYIARL--ELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLR 58
             +++CG I ++  E++ S SNL +  +L +FPGGS+TFE+ +KFCYG+      +N+  +R
Sbjct:    55 VARCGKIRKMVAEMKESSSNLSHT-ELRDFPGGSKTFELAMKFCYGINFEITISNVVAIR 113

Query:    59 CASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPW--AENLQIVRR 116
             CA+ +L+M+E++++ NLI++TE +L  V   S ++++ VL SC+ L P   AE   I  R
Sbjct:   114 CAAGYLEMTEDFKEENLIARTETYLEQVAFRSLEKSVEVLCSCETLYPQDIAETAHIPDR 173

Query:   117 CCDSIAWKASRE---------NSTTEDIANRQG----WWFDDVATLGIDHFMRIITTIKV 163
             C ++IA  A RE         N  TE    ++G    WW +D++ L ID++ R+++ +  
Sbjct:   174 CVEAIAVNACREQLVLGLSRLNRGTESGELKRGDSPEWWIEDLSALRIDYYARVVSAMAR 233

Query:   164 KGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQR 223
              G + E I   +MHYA++        L+G+R     K   +   L++G  E      EQR
Sbjct:   234 TGLRSESIITSLMHYAQE-------SLKGIRNC---KERTK---LDSGTFE-----NEQR 275

Query:   224 TIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLI 283
              ++E +V+L P+  + V   F   ML++ +  N + +   ELE+R+   LE  + +DLLI
Sbjct:   276 NVLEAIVSLFPN--DNVPLSFLFGMLRVGITINVAISCRLELERRIAQQLETVSLDDLLI 333

Query:   284 PNYKNEDHAKLNSPEHNTMHNIDV--VQRI-----MDYFLMHEXXXXXXXXNMGKTN--- 333
             P  ++ D    +  + +T+H I V  +++I      D    +E        +M  ++   
Sbjct:   334 PVVRDGD----SMYDVDTVHRILVCFLKKIEEEEEYDEDCCYENETENLTGSMCHSSLLK 389

Query:   334 VSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLK 383
             V +I+D YLAE+A DP LS+ KF  L E LP+ AR   DGLYRAID +LK
Sbjct:   390 VGRIMDAYLAEIAPDPCLSLHKFMALIEILPDYARVMDDGLYRAIDMFLK 439

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0009416 "response to light stimulus" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	404
pfam03000	249	pfam03000, NPH3, NPH3 family	1e-95

>gnl|CDD|217312 pfam03000, NPH3, NPH3 family

 Score =  286 bits (733), Expect = 1e-95
 Identities = 100/252 (39%), Positives = 149/252 (59%), Gaps = 41/252 (16%)

Query: 141 WWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGK 200
           WWF+D++ L ID F R+IT +K +G KPE+IG+ +MHYAKKWLPG               
Sbjct: 3   WWFEDLSELSIDLFKRVITAMKSRGVKPEVIGEALMHYAKKWLPG--------------- 47

Query: 201 HELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPA 260
                  L+         ++EQR ++E +V+LLP +   VSC F  ++L+ A++  AS +
Sbjct: 48  -------LSRSGSSEEDSEEEQRALLETIVSLLPSEKGSVSCSFLFKLLRAAIILGASES 100

Query: 261 LISELEKRVGMMLEDANANDLLIPN-YKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHE 319
              ELE+R+G+ L+ A  +DLLIP+ Y  E+          T++++D+VQRI++ FL  +
Sbjct: 101 CREELERRIGLQLDQATLDDLLIPSGYSGEE----------TLYDVDLVQRILEVFLSRD 150

Query: 320 QQQQQK--------QQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCH 371
              Q            +     V+K++D YLAE+A DPNL ++KF  LAE++P++AR  H
Sbjct: 151 AATQSSDDEDSEASPSSSSLLKVAKLVDGYLAEIAPDPNLKLSKFIALAEAVPDSARPSH 210

Query: 372 DGLYRAIDTYLK 383
           DGLYRAID YLK
Sbjct: 211 DGLYRAIDIYLK 222

Phototropism of Arabidopsis thaliana seedlings in response to a blue light source is initiated by nonphototropic hypocotyl 1 (NPH1), a light-activated serine-threonine protein kinase. Mutations in NPH3 disrupt early signaling occurring downstream of the NPH1 photoreceptor. The NPH3 gene encodes a NPH1-interacting protein. NPH3 is a member of a large protein family, apparently specific to higher plants, and may function as an adapter or scaffold protein to bring together the enzymatic components of a NPH1-activated phosphorelay. Length = 249

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	404
PF03000	258	NPH3: NPH3 family; InterPro: IPR004249 The RPT2 pr	100.0
PF00651	111	BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (	98.14
smart00225	90	BTB Broad-Complex, Tramtrack and Bric a brac. Doma	97.98
PHA03098	534	kelch-like protein; Provisional	97.93
KOG4441	571	consensus Proteins containing BTB/POZ and Kelch do	97.51
PHA02713	557	hypothetical protein; Provisional	97.14
PHA02790	480	Kelch-like protein; Provisional	96.72
PF11822	317	DUF3342: Domain of unknown function (DUF3342); Int	92.64
smart00512	104	Skp1 Found in Skp1 protein family. Family of Skp1	81.45
KOG2075	521	consensus Topoisomerase TOP1-interacting protein B	81.08

>PF03000 NPH3: NPH3 family; InterPro: IPR004249 The RPT2 protein is a signal transducer of the phototropic response in Arabidopsis thaliana

Probab=100.00  E-value=9.3e-86  Score=636.19  Aligned_cols=240  Identities=43%  Similarity=0.784  Sum_probs=214.0

Q ss_pred             CCceehhccccChHHHHHHHHHHHhcCCCchhHHHHHHHHHHhhcCCCccccccccCCCCCCcchhhhhhccCCcccccc
Q 015578          139 QGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVG  218 (404)
Q Consensus       139 ~dWW~eDl~~L~~~~f~rvi~am~~~g~~~~~i~~~L~~Ya~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (404)
                      +|||||||+.|++++|+|||.+|+++||++++||++|+|||+||||++.+...+....               ..+....
T Consensus         1 ~dWW~eDl~~L~id~f~rvi~a~~~~~~~~~~I~~~l~~Ya~k~l~~~~~~~~~~~~~---------------~~~~~~~   65 (258)
T PF03000_consen    1 KDWWFEDLSELSIDLFKRVISAMKSKGMKPEVIGEALMHYAKKWLPGLSRSSSGSSSS---------------AESSTSS   65 (258)
T ss_pred             CCccHHHHHhCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCccccccccccc---------------ccccchh
Confidence            5899999999999999999999999999999999999999999999985541111100               1223446


Q ss_pred             hhhhHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhhhcccccccccccCCCCccccccCCCC
Q 015578          219 QKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPE  298 (404)
Q Consensus       219 ~~~qr~llE~iv~LLP~e~~~vsc~fLf~LLr~a~~l~as~~cr~~LE~rIg~qLd~AtldDLLIPs~~~~~~~~~~~~~  298 (404)
                      ..+||.+||+||+|||.+++++||+|||+|||+|+++++|++||.+||+|||+|||||||||||||+.+...+       
T Consensus        66 ~~~~r~llEtiV~lLP~e~~svsc~FL~~LLr~A~~l~as~~cr~~Le~rIg~qLd~AtldDLLIP~~~~~~~-------  138 (258)
T PF03000_consen   66 ENEQRELLETIVSLLPPEKGSVSCSFLFRLLRAAIMLGASSACRNELERRIGSQLDQATLDDLLIPSSPSGED-------  138 (258)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhccHHHhcccCCCCccc-------
Confidence            7899999999999999999999999999999999999999999999999999999999999999999323332       


Q ss_pred             CCcccchHHHHHHHHHHHhhHhhh----------hhhhcchhhhhhhhchhhHhhhhcCCCCCChhHHHHHHHhcCCccc
Q 015578          299 HNTMHNIDVVQRIMDYFLMHEQQQ----------QQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENAR  368 (404)
Q Consensus       299 ~~tlyDVd~V~riv~~Fl~~~~~~----------~~~~~~~~~~~VakLvD~YLaEiA~D~nL~~~kF~~Lae~lP~~aR  368 (404)
                        |+||||+|+|||++||.+.+..          ...++.+++.+||||||+||+|||+|+||+|+||++|||++|++||
T Consensus       139 --t~yDVd~V~riv~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEiA~D~~L~~~kF~~Lae~lP~~aR  216 (258)
T PF03000_consen  139 --TLYDVDLVQRIVEHFLSQEEEAGEEEESESESGSSPSSSSLVKVAKLVDGYLAEIAPDPNLKPSKFVALAEALPDSAR  216 (258)
T ss_pred             --chhhHHHHHHHHHHHHhcccccccccccccccccCCChHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHCCHhhh
Confidence              9999999999999999984321          1125678999999999999999999999999999999999999999


Q ss_pred             ccCcchhHHHHHhhhcCCCCchHHH--------hhccccccc
Q 015578          369 TCHDGLYRAIDTYLKPIVFFSHIRH--------YLNMIGEGC  402 (404)
Q Consensus       369 ~~hDgLYRAIDiYLKaHp~ls~~e~--------~~~~~~~~~  402 (404)
                      ++|||||||||||||+||++|++||        |+|||+|+|
T Consensus       217 ~~hD~LYrAID~YLk~Hp~ls~~Er~~lC~~ldc~KLS~EAC  258 (258)
T PF03000_consen  217 PSHDGLYRAIDIYLKAHPGLSEEERKRLCRLLDCQKLSPEAC  258 (258)
T ss_pred             hccchHHHHHHHHHHHcccCCHHHHHHHHhhCCcccCCcccC
Confidence            9999999999999999999999987        689999999

The RPT2 gene is light inducible; encodes a novel protein with putative phosphorylation sites, a nuclear localization signal, a BTB/POZ domain (IPR000210 from INTERPRO), and a coiled-coil domain. RPT2 belongs to a large gene family that includes the recently isolated NPH3 gene []. The NPH3 protein is a NPH1 photoreceptor-interacting protein that is essential for phototropism. Phototropism of A. thaliana seedlings in response to a blue light source is initiated by nonphototropic hypocotyl 1 (NPH1), a light-activated serine-threonine protein kinase []. NPH3 is a member of a large protein family, apparently specific to higher plants, and may function as an adapter or scaffold protein to bring together the enzymatic components of a NPH1-activated phosphorelay []. Many of the proteins in this group also contain the BTB/POZ domain (IPR000210 from INTERPRO) at the N-terminal.; GO: 0004871 signal transducer activity, 0009416 response to light stimulus

>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins

Probab=98.14  E-value=4.1e-06  Score=69.26  Aligned_cols=77  Identities=23%  Similarity=0.320  Sum_probs=67.0

Q ss_pred             ccccHHHHHHcCCC-CCCCccceeecCCCCChHHHHHHHHhhcCCccccC-CcchHHHHhhHhhhcCccccCCCchHHHH
Q 015578            2 SKCGYIARLELQPS-ISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFN-PNNIAPLRCASEFLDMSEEYEDGNLISKT   79 (404)
Q Consensus         2 SkSg~l~rl~~~~~-~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt-~~NVa~LrCAAeyLeMtE~~~~~NLi~~t   79 (404)
                      ++|.||++++.... ......+|.+++++  +++|+...+|||+..+.++ ..|+..+...|.+++|.+      |...+
T Consensus        32 ~~S~~F~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~l~~~Y~~~~~~~~~~~~~~ll~lA~~~~~~~------L~~~~  103 (111)
T PF00651_consen   32 ARSPYFRNLFEGSKFKESTVPEISLPDVS--PEAFEAFLEYMYTGEIEINSDENVEELLELADKLQIPE------LKKAC  103 (111)
T ss_dssp             HHBHHHHHHHTTTTSTTSSEEEEEETTSC--HHHHHHHHHHHHHSEEEEE-TTTHHHHHHHHHHTTBHH------HHHHH
T ss_pred             ccchhhhhccccccccccccccccccccc--ccccccccccccCCcccCCHHHHHHHHHHHHHHhCcHH------HHHHH
Confidence            57999999999883 22233478888887  8899999999999999998 999999999999999995      99999


Q ss_pred             HHHhhhh
Q 015578           80 EAFLTLV   86 (404)
Q Consensus        80 E~fL~~~   86 (404)
                      +.||.+.
T Consensus       104 ~~~l~~~  110 (111)
T PF00651_consen  104 EKFLQES  110 (111)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhC
Confidence            9999863

The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....

>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac

Probab=97.98  E-value=1.1e-05  Score=62.53  Aligned_cols=65  Identities=17%  Similarity=0.264  Sum_probs=54.9

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcc
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSE   68 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE   68 (404)
                      ++|.+|++++...........+.+.|  ..+++|+.+-+|+|+.++.+++.|+..+..+|+|++|.+
T Consensus        20 ~~s~~f~~~~~~~~~~~~~~~i~l~~--~~~~~f~~~l~~ly~~~~~~~~~~~~~l~~~a~~~~~~~   84 (90)
T smart00225       20 ACSPYFKALFSGDFKESKKSEIYLDD--VSPEDFRALLEFLYTGKLDLPEENVEELLELADYLQIPG   84 (90)
T ss_pred             hcCHHHHHHHcCCCccCCCCEEEecC--CCHHHHHHHHHeecCceeecCHHHHHHHHHHHHHHCcHH
Confidence            46899999998654332345677766  579999999999999999999999999999999999985

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.

>PHA03098 kelch-like protein; Provisional

Probab=97.93  E-value=9.7e-05  Score=78.05  Aligned_cols=139  Identities=14%  Similarity=0.271  Sum_probs=99.8

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||+.++...-.   ..+|+|.+   -+++|+.+.+|-|.++++|+..||..|--||.+|+|.+      |....+.
T Consensus        32 a~S~yF~~mf~~~~~---~~~i~l~~---~~~~~~~~l~y~Ytg~~~i~~~~~~~ll~~A~~l~~~~------l~~~C~~   99 (534)
T PHA03098         32 SSSEYFKKMFKNNFK---ENEINLNI---DYDSFNEVIKYIYTGKINITSNNVKDILSIANYLIIDF------LINLCIN   99 (534)
T ss_pred             hhhHHHHHHHhCCCC---CceEEecC---CHHHHHHHHHHhcCCceEEcHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence            579999999976432   35777776   78999999999999999999999999999999999996      9999999


Q ss_pred             HhhhhhccChHHHHHHHhhhccccchhhhh---hhHHHHHHHHHHHh---ccCCCcccccccCCCceehhccccChHHHH
Q 015578           82 FLTLVILSSWKETITVLKSCKNLSPWAENL---QIVRRCCDSIAWKA---SRENSTTEDIANRQGWWFDDVATLGIDHFM  155 (404)
Q Consensus        82 fL~~~v~~sW~dsi~vL~sc~~llp~AE~l---~Iv~RCidsla~ka---~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~  155 (404)
                      ||.+.+  +-..       |-.++..|+..   .+.+.|.+-|+...   +.+               +|...|+.+..+
T Consensus       100 ~l~~~l--~~~n-------c~~~~~~a~~~~~~~L~~~~~~~i~~nf~~v~~~---------------~~f~~l~~~~l~  155 (534)
T PHA03098        100 YIIKII--DDNN-------CIDIYRFSFFYGCKKLYSAAYNYIRNNIELIYND---------------PDFIYLSKNELI  155 (534)
T ss_pred             HHHHhC--CHhH-------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcC---------------chhhcCCHHHHH
Confidence            998865  2333       44444455544   36667777666442   211               456678877666


Q ss_pred             HHHHHHHhcC--C-CchhHHHHHHHHH
Q 015578          156 RIITTIKVKG--T-KPEIIGKCIMHYA  179 (404)
Q Consensus       156 rvi~am~~~g--~-~~~~i~~~L~~Ya  179 (404)
                      .++.   +..  + +++.+-++++.++
T Consensus       156 ~ll~---~~~L~v~~E~~v~~av~~W~  179 (534)
T PHA03098        156 KILS---DDKLNVSSEDVVLEIIIKWL  179 (534)
T ss_pred             HHhc---CCCcCcCCHHHHHHHHHHHH
Confidence            5543   333  2 4556777765444

>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]

Probab=97.51  E-value=0.0014  Score=70.86  Aligned_cols=198  Identities=16%  Similarity=0.275  Sum_probs=132.8

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      +-|.||+-+++..-.+....+|+|.+  .-++++++...|+|.++++|+-.||-.|--||.+|+|++      +..-.-.
T Consensus        57 a~S~YFraMFt~~l~e~~~~~i~l~~--v~~~~l~~ll~y~Yt~~i~i~~~nVq~ll~aA~~lQi~~------v~~~C~~  128 (571)
T KOG4441|consen   57 ACSPYFRAMFTSGLKESKQKEINLEG--VDPETLELLLDYAYTGKLEISEDNVQELLEAASLLQIPE------VVDACCE  128 (571)
T ss_pred             hccHHHHHHhcCCcccccceEEEEec--CCHHHHHHHHHHhhcceEEechHhHHHHHHHHHHhhhHH------HHHHHHH
Confidence            45789999988533333556899998  789999999999999999999999999999999999996      8888999


Q ss_pred             HhhhhhccChHHHH-----HHHhhhccccchhhhhhhHHHHHHHHHHHhccCCCcccccccCCCceehhccccChHHHHH
Q 015578           82 FLTLVILSSWKETI-----TVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMR  156 (404)
Q Consensus        82 fL~~~v~~sW~dsi-----~vL~sc~~llp~AE~l~Iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~r  156 (404)
                      ||.+.+..  ..++     +-+.+|..|...|.+ .|.+...+-..                    -||-..||.+.+..
T Consensus       129 fL~~~l~~--~Nclgi~~~a~~~~~~~L~~~a~~-~i~~~F~~v~~--------------------~eefl~L~~~~l~~  185 (571)
T KOG4441|consen  129 FLESQLDP--SNCLGIRRFAELHSCTELLEVADE-YILQHFAEVSK--------------------TEEFLLLSLEELIG  185 (571)
T ss_pred             HHHhcCCH--HHHHHHHHHHHhcCcHHHHHHHHH-HHHHHHHHHhc--------------------cHHhhCCCHHHHHh
Confidence            99986533  3333     334567777766654 24444333211                    15555688777666


Q ss_pred             HHHHHHhcCCCchhHHHHHHHHHHhhcCCCccccccccCCCCCCcchhhhhhccCCcccccchhhhHHHHHHHHHhCCCC
Q 015578          157 IITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQ  236 (404)
Q Consensus       157 vi~am~~~g~~~~~i~~~L~~Ya~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qr~llE~iv~LLP~e  236 (404)
                      +|..-.-.--+++-+..+    +-+|+..=                            .   ..+++    .+..+|..-
T Consensus       186 ll~~d~l~v~~E~~vf~a----~~~Wv~~d----------------------------~---~~R~~----~~~~ll~~v  226 (571)
T KOG4441|consen  186 LLSSDDLNVDSEEEVFEA----AMRWVKHD----------------------------F---EEREE----HLPALLEAV  226 (571)
T ss_pred             hccccCCCcCCHHHHHHH----HHHHHhcC----------------------------H---hhHHH----HHHHHHHhc
Confidence            665533333345555555    45555530                            0   00111    122233222


Q ss_pred             C-CcccHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 015578          237 D-EGVSCKFFLQMLKMAMVYNASPALISELEKRV  269 (404)
Q Consensus       237 ~-~~vsc~fLf~LLr~a~~l~as~~cr~~LE~rI  269 (404)
                      + .-++-.||.......-.+.....||..|..=.
T Consensus       227 r~~ll~~~~l~~~v~~~~~~~~~~~c~~~l~ea~  260 (571)
T KOG4441|consen  227 RLPLLPPQFLVEIVESEPLIKRDSACRDLLDEAK  260 (571)
T ss_pred             CccCCCHHHHHHHHhhhhhhccCHHHHHHHHHHH
Confidence            2 34778899999999989999999999886544

>PHA02713 hypothetical protein; Provisional

Probab=97.14  E-value=0.0018  Score=69.71  Aligned_cols=85  Identities=16%  Similarity=0.316  Sum_probs=68.0

Q ss_pred             ccccHHHHHHcCCCC-CCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578            2 SKCGYIARLELQPSI-SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE   80 (404)
Q Consensus         2 SkSg~l~rl~~~~~~-~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE   80 (404)
                      +.|.||+.|++..-. +....+|+|.++  .+++|+.+.+|.|.++  ||+.||-.|-.||.+|+|++      |....+
T Consensus        47 a~S~YF~amF~~~~~e~~~~~~v~l~~v--~~~~~~~ll~y~Yt~~--i~~~nv~~ll~aA~~lqi~~------l~~~C~  116 (557)
T PHA02713         47 AGSKYFRTLFTTPMIIRDLVTRVNLQMF--DKDAVKNIVQYLYNRH--ISSMNVIDVLKCADYLLIDD------LVTDCE  116 (557)
T ss_pred             hcCHHHHHHhcCCchhhccCceEEeccC--CHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHHHCHHH------HHHHHH
Confidence            579999999975322 112457889876  5899999999999886  79999999999999999996      999999


Q ss_pred             HHhhhhhccChHHHHHHH
Q 015578           81 AFLTLVILSSWKETITVL   98 (404)
Q Consensus        81 ~fL~~~v~~sW~dsi~vL   98 (404)
                      .||.+.+-  -..++.++
T Consensus       117 ~~l~~~l~--~~NCl~i~  132 (557)
T PHA02713        117 SYIKDYTN--HDTCIYMY  132 (557)
T ss_pred             HHHHhhCC--ccchHHHH
Confidence            99988653  23455554

>PHA02790 Kelch-like protein; Provisional

Probab=96.72  E-value=0.0025  Score=67.29  Aligned_cols=80  Identities=13%  Similarity=0.042  Sum_probs=65.1

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      +-|.|||-|++..-.+ ...+|.+..+.-.+++++.+.+|-|.++++||..||-.+-.||.||+|++      ++.....
T Consensus        42 a~S~YFraMF~~~~~E-s~~~v~~~~~~v~~~~l~~lldy~YTg~l~it~~nV~~ll~aA~~Lqi~~------v~~~C~~  114 (480)
T PHA02790         42 KLSPYFRTHLRQKYTK-NKDPVTRVCLDLDIHSLTSIVIYSYTGKVYIDSHNVVNLLRASILTSVEF------IIYTCIN  114 (480)
T ss_pred             hcCHHHHHHhcCCccc-cccceEEEecCcCHHHHHHHHHhheeeeEEEecccHHHHHHHHHHhChHH------HHHHHHH
Confidence            4688999998753222 12345554234468999999999999999999999999999999999996      9999999


Q ss_pred             Hhhhhhc
Q 015578           82 FLTLVIL   88 (404)
Q Consensus        82 fL~~~v~   88 (404)
                      ||.+.+-
T Consensus       115 fL~~~l~  121 (480)
T PHA02790        115 FILRDFR  121 (480)
T ss_pred             HHHhhCC
Confidence            9998763

>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised

Probab=92.64  E-value=0.099  Score=52.87  Aligned_cols=78  Identities=21%  Similarity=0.327  Sum_probs=57.8

Q ss_pred             ccccHHHHHHcCC-CCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578            2 SKCGYIARLELQP-SISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE   80 (404)
Q Consensus         2 SkSg~l~rl~~~~-~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE   80 (404)
                      ++=+||+..+... +++....+|.|. +-=.-..||.-.++++|..+.|||.||+++---++||+|++      |++.+=
T Consensus        25 ~~M~YF~~~l~~~~~~~~~~~~idis-VhCDv~iF~WLm~yv~~~~p~l~~~NvvsIliSS~FL~M~~------Lve~cl   97 (317)
T PF11822_consen   25 SEMRYFAEYLSRYINDSQRWEEIDIS-VHCDVHIFEWLMRYVKGEPPSLTPSNVVSILISSEFLQMES------LVEECL   97 (317)
T ss_pred             HhhHHHHHHHhhcccccCcCCCcceE-EecChhHHHHHHHHhhcCCCcCCcCcEEEeEehhhhhccHH------HHHHHH
Confidence            3447888888541 111122233332 22345799999999999999999999999999999999996      999998


Q ss_pred             HHhhhh
Q 015578           81 AFLTLV   86 (404)
Q Consensus        81 ~fL~~~   86 (404)
                      .|....
T Consensus        98 ~y~~~~  103 (317)
T PF11822_consen   98 QYCHDH  103 (317)
T ss_pred             HHHHHh
Confidence            888653

This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.

>smart00512 Skp1 Found in Skp1 protein family

Probab=81.45  E-value=2.4  Score=35.47  Aligned_cols=62  Identities=15%  Similarity=0.269  Sum_probs=40.2

Q ss_pred             cccHHHHHHcCCCCCC-CccceeecCCCCChHHHHHHHHhhcCCc---c----------------ccCCcchHHHHhhHh
Q 015578            3 KCGYIARLELQPSISN-LGYDLKLENFPGGSETFEIILKFCYGLP---I----------------AFNPNNIAPLRCASE   62 (404)
Q Consensus         3 kSg~l~rl~~~~~~~~-~~~~i~l~dfPGGaeaFEl~akFCYg~~---i----------------~lt~~NVa~LrCAAe   62 (404)
                      .|+.++.++.+..... +...|.|++++  +.+++.+.+||+--+   .                .+...++--|-.||.
T Consensus        23 ~S~~i~~~l~~~~~~~~~~~~Ipl~~v~--~~~L~~Vi~yc~~h~~~~~~~~~~~~~~~wD~~F~~~d~~~l~dLl~AAn  100 (104)
T smart00512       23 QSKTIKAMIEDLGVDDENNNPIPLPNVT--SKILSKVIEYCEHHVDDPPSVADKDDIPTWDAEFLKIDQETLFELILAAN  100 (104)
T ss_pred             HHHHHHHHHHccCcccCCCCCccCCCcC--HHHHHHHHHHHHHcccCCCCccccccccHHHHHHHcCCHHHHHHHHHHHH
Confidence            5888999998654321 12356666665  689999999998321   0                034445666677777


Q ss_pred             hhcC
Q 015578           63 FLDM   66 (404)
Q Consensus        63 yLeM   66 (404)
                      ||++
T Consensus       101 yL~I  104 (104)
T smart00512      101 YLDI  104 (104)
T ss_pred             hhCC
Confidence            7764

Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.

>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]

Probab=81.08  E-value=11  Score=40.51  Aligned_cols=151  Identities=12%  Similarity=0.177  Sum_probs=100.0

Q ss_pred             ccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHHHh
Q 015578            4 CGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFL   83 (404)
Q Consensus         4 Sg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~fL   83 (404)
                      |..+-+|+.+........+|+++|+  -|.+|+---||=|+..+.+.|.||-.+.-+|.=      |-.+-|...+-+||
T Consensus       142 S~VFdaMf~g~~a~~~s~ei~lpdv--epaaFl~~L~flYsdev~~~~dtvi~tl~~AkK------Y~VpaLer~CVkfl  213 (521)
T KOG2075|consen  142 SDVFDAMFYGGLAEDASLEIRLPDV--EPAAFLAFLRFLYSDEVKLAADTVITTLYAAKK------YLVPALERQCVKFL  213 (521)
T ss_pred             hHHHHHHhccCcccccCceeecCCc--ChhHhHHHHHHHhcchhhhhHHHHHHHHHHHHH------hhhHHHHHHHHHHH
Confidence            3445666665443323668999976  589999999999999999999999887766642      23345888888899


Q ss_pred             hhhhccChHHHHHHHhhhccccchhhhhhhHHHHHHHHHHHh--ccCCCcccccccCCCceehhccccChHHHHHHHHHH
Q 015578           84 TLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKA--SRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTI  161 (404)
Q Consensus        84 ~~~v~~sW~dsi~vL~sc~~llp~AE~l~Iv~RCidsla~ka--~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~rvi~am  161 (404)
                      +...+.  .....-|-+|-.++   ++=.+.++|++.|.-..  |.++           -||-|.-.+ .++|..|++- 
T Consensus       214 r~~l~~--~naf~~L~q~A~lf---~ep~Li~~c~e~id~~~~~al~~-----------EGf~did~~-~dt~~evl~r-  275 (521)
T KOG2075|consen  214 RKNLMA--DNAFLELFQRAKLF---DEPSLISICLEVIDKSFEDALTP-----------EGFCDIDST-RDTYEEVLRR-  275 (521)
T ss_pred             HHhcCC--hHHHHHHHHHHHhh---cCHHHHHHHHHHhhhHHHhhhCc-----------cceeehhhH-HHHHHHHHhh-
Confidence            886643  44455555554443   44459999999986332  3222           377777666 7888776643 


Q ss_pred             HhcCCCchhHHHHHHHHHH
Q 015578          162 KVKGTKPEIIGKCIMHYAK  180 (404)
Q Consensus       162 ~~~g~~~~~i~~~L~~Ya~  180 (404)
                      ....++.-.+-+++..|++
T Consensus       276 ~~l~~~e~~lfeA~lkw~~  294 (521)
T KOG2075|consen  276 DTLEAREFRLFEAALKWAE  294 (521)
T ss_pred             cccchhHHHHHHHHHhhcc
Confidence            1123455556677555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	404
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 2e-07
 Identities = 62/438 (14%), Positives = 132/438 (30%), Gaps = 104/438 (23%)

Query: 35  FEIILKFCYG-LPIAFNPNNIAPLRCASEFLDMSEE-YEDGNLISK-----TEAFLTL-- 85
            E +L+  Y  L          P      +++  +  Y D  + +K      + +L L  
Sbjct: 83  VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142

Query: 86  VILSSWKETITVL-------KSCKNLSPWAENLQ---IVRRCCDSIAW-KASRENSTTED 134
            +L        ++       K+   ++   +      +  +    I W      NS    
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTW--VA--LDVCLSYKVQCKMDFKIFWLNLKNCNSPETV 198

Query: 135 IANRQGWW--FDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGM-----D 187
           +   Q      D   T   DH   I   I        I  +       K          +
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIH------SIQAELRRLLKSKPYENCLLVLLN 252

Query: 188 V-ELEGLRGYGYGKHEL----QFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSC 242
           V   +    +      L       + +     +S       ++  + + L P + + +  
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDF----LSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 243 KFF---LQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEH 299
           K+     Q L   ++   +P  +S     +   + D  A      N+K+ +  KL +   
Sbjct: 309 KYLDCRPQDLPREVL-TTNPRRLS----IIAESIRDGLA---TWDNWKHVNCDKLTT--- 357

Query: 300 NTMHNIDVVQRIMDYFLMHEQQQQQKQ-------------------QNMGKTNVSKILD- 339
                  +++  ++     E ++   +                    ++ K++V  +++ 
Sbjct: 358 -------IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

Query: 340 --NYLAEVARDPN---LSITKFQVLAESLPENARTCHDGL---YRAIDTY-----LKPIV 386
              Y   V + P    +SI    +  +   EN    H  +   Y    T+     + P +
Sbjct: 411 LHKYSL-VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469

Query: 387 ---FFSHIRHYLNMIGEG 401
              F+SHI H+L  I   
Sbjct: 470 DQYFYSHIGHHLKNIEHP 487

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	404
3i3n_A	279	Kelch-like protein 11; structural genomics, BTB, K	98.72
3hve_A	256	Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis	98.53
2vkp_A	109	BTB/POZ domain-containing protein 6; protein-bindi	98.45
1buo_A	121	POZ domain, protein (promyelocytic leukemia zinc f	98.43
2if5_A	120	Zinc finger and BTB domain-containing protein 7A;	98.37
3b84_A	119	Zinc finger and BTB domain-containing protein 48;	98.36
3htm_A	172	Speckle-type POZ protein; BTB, SPOP, ubiquitin, li	98.34
2vpk_A	116	Myoneurin; transcription regulation, transcription	98.3
1r29_A	127	B-cell lymphoma 6 protein; BTB domain, transcripti	98.27
2ppi_A	144	Gigaxonin; BTB domain, protein degradation, struct	98.23
2yy9_A	135	Zinc finger and BTB domain-containing protein 48;	98.22
2z8h_A	138	Transcription regulator protein BACH1; BTB, POZ, d	98.21
3ga1_A	129	Nucleus accumbens-associated protein 1; BTB/POZ do	98.2
2q81_A	119	MIZ-1 protein; BTB/POZ domain, transcription; HET:	98.19
4eoz_A	145	Speckle-type POZ protein; E3 ubiquitin ligase, nuc	98.16
3ohu_A	125	Transcription regulator protein BACH2; BTB/POZ dom	98.1
2ihc_A	124	Transcription regulator protein BACH1; BRIC-A-BRAC	97.91
3m5b_A	119	Zinc finger and BTB domain-containing protein 32;	97.83
3hqi_A	312	Speckle-type POZ protein; SPOP, ubiquitin, puckere	97.8
3fkc_A	116	Transcriptional regulator kaiso; zinc finger and B	97.79
4ajy_C	97	Transcription elongation factor B polypeptide 1; E	96.49
2ast_A	159	S-phase kinase-associated protein 1A; SCF-substrat	96.42
1fs1_B	141	SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le	93.98
2p1m_A	160	SKP1-like protein 1A; F-BOX, leucine rich repeat,	93.86
3v7d_A	169	Suppressor of kinetochore protein 1; WD 40 domain,	86.01
2fnj_C	96	Transcription elongation factor B polypeptide 1; b	84.6

>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A

Probab=98.72  E-value=1.4e-08  Score=97.03  Aligned_cols=199  Identities=11%  Similarity=0.147  Sum_probs=132.3

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCC----CCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENF----PGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLIS   77 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~df----PGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~   77 (404)
                      ++|.||+.++...-.+....+|.|+++    ...+++|+.+.+|+|++++.+++.||..+..||.+|+|.+      |..
T Consensus        56 a~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~  129 (279)
T 3i3n_A           56 AATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKE  129 (279)
T ss_dssp             HHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHH
T ss_pred             HcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHH
Confidence            478999999875432224458889877    4578999999999999999999999999999999999985      999


Q ss_pred             HHHHHhhhhhccChHHHHHHHhhhccccchhhhhh---hHHHHHHHHHHHhccCCCcccccccCCCceehhccccChHHH
Q 015578           78 KTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHF  154 (404)
Q Consensus        78 ~tE~fL~~~v~~sW~dsi~vL~sc~~llp~AE~l~---Iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f  154 (404)
                      ..+.||.+.+-.  .       .|-.++.+|+..+   +..+|.+-|......       +     +--++...|+.+..
T Consensus       130 ~c~~~L~~~l~~--~-------n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-------v-----~~~~~f~~L~~~~l  188 (279)
T 3i3n_A          130 FCGEFLKKKLHL--S-------NCVAIHSLAHMYTLSQLALKAADMIRRNFHK-------V-----IQDEEFYTLPFHLI  188 (279)
T ss_dssp             HHHHHHHHHCCT--T-------THHHHHHHHHHTTCHHHHHHHHHHHHHTHHH-------H-----TTSSGGGGSCHHHH
T ss_pred             HHHHHHHHcCCc--c-------hHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-------H-----hcCcChhcCCHHHH
Confidence            999999986532  2       3444445555543   677888777644310       0     01155668888777


Q ss_pred             HHHHHHHHhcC--CC-chhHHHHHHHHHHhhcCCCccccccccCCCCCCcchhhhhhccCCcccccchhhhHHHHHHHHH
Q 015578          155 MRIITTIKVKG--TK-PEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVN  231 (404)
Q Consensus       155 ~rvi~am~~~g--~~-~~~i~~~L~~Ya~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qr~llE~iv~  231 (404)
                      ..++.   +..  ++ +..|-.+++.|+    ..-                                ....+..+.   .
T Consensus       189 ~~lL~---~d~L~v~sE~~vf~av~~W~----~~~--------------------------------~~~r~~~~~---~  226 (279)
T 3i3n_A          189 RDWLS---DLEITVDSEEVLFETVLKWV----QRN--------------------------------AEERERYFE---E  226 (279)
T ss_dssp             HHHHT---CSSCCCSCHHHHHHHHHHHH----HTT--------------------------------HHHHTTTHH---H
T ss_pred             HHHhc---CcCCCCCCHHHHHHHHHHHH----HcC--------------------------------HHHHHHHHH---H
Confidence            66654   332  33 455777765544    320                                001112222   3


Q ss_pred             hCCCCC-CcccHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 015578          232 LLPHQD-EGVSCKFFLQMLKMAMVYNASPALISELEKRV  269 (404)
Q Consensus       232 LLP~e~-~~vsc~fLf~LLr~a~~l~as~~cr~~LE~rI  269 (404)
                      ||..=| ..+|..+|..+++..-.+..++.|+.-+..-.
T Consensus       227 ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~  265 (279)
T 3i3n_A          227 LFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAV  265 (279)
T ss_dssp             HHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHH
Confidence            443333 34889999999888888888999998876543

>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B

Probab=98.53  E-value=8.3e-08  Score=90.32  Aligned_cols=151  Identities=15%  Similarity=0.206  Sum_probs=98.4

Q ss_pred             ccccHHHHHHcCCCC--CCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHH
Q 015578            2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT   79 (404)
Q Consensus         2 SkSg~l~rl~~~~~~--~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~t   79 (404)
                      ++|.||+.++.....  +....+|.|+|++  +++|+.+.+|+|++++.+++.||..+..||.+|+|.+      |....
T Consensus        52 a~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~------l~~~c  123 (256)
T 3hve_A           52 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC  123 (256)
T ss_dssp             TTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHH------HHHHH
T ss_pred             HcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHH------HHHHH
Confidence            579999999875332  1134588888874  8999999999999999999999999999999999995      99999


Q ss_pred             HHHhhhhhccChHHHHHHHhhhccccchhhhhh---hHHHHHHHHHHHhccCCCcccccccCCCceehhccccChHHHHH
Q 015578           80 EAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMR  156 (404)
Q Consensus        80 E~fL~~~v~~sW~dsi~vL~sc~~llp~AE~l~---Iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~r  156 (404)
                      +.||.+.+-.  ..       |-.++.+|+..+   +...|.+-|+.....=            +--++...|+.+....
T Consensus       124 ~~~L~~~l~~--~n-------~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v------------~~~~~f~~L~~~~l~~  182 (256)
T 3hve_A          124 CEFLEGCIAA--EN-------CIGIRDFALHYCLHHVHYLATEYLETHFRDV------------SSTEEFLELSPQKLKE  182 (256)
T ss_dssp             HHHHHHTCCS--ST-------THHHHHHHHHTTCHHHHHHHHHHHHHHHHHH------------TTCHHHHSSCHHHHHH
T ss_pred             HHHHHhhCCH--hh-------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH------------hCCcchhcCCHHHHHH
Confidence            9999986532  23       333444455443   6677777765443100            0125667889888877


Q ss_pred             HHHHHHhcCCCchhHHHHHHHHHHhhcCC
Q 015578          157 IITTIKVKGTKPEIIGKCIMHYAKKWLPG  185 (404)
Q Consensus       157 vi~am~~~g~~~~~i~~~L~~Ya~~~l~~  185 (404)
                      ++..=.=.-.++..|-.+    +.+|+..
T Consensus       183 lL~~d~L~v~~E~~v~~a----v~~W~~~  207 (256)
T 3hve_A          183 VISLEKLNVGNERYVFEA----VIRWIAH  207 (256)
T ss_dssp             HHHCC-------CTTHHH----HTTTCCC
T ss_pred             HHccCCCCCCCHHHHHHH----HHHHHHc
Confidence            765311111134455555    4677763

>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}

Probab=98.45  E-value=2.3e-07  Score=75.95  Aligned_cols=76  Identities=13%  Similarity=0.164  Sum_probs=63.5

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||++++...-.+.. .+|.|+|+  .+++|+...+|+|++++.+++.|+..+..+|++++|.+      |...++.
T Consensus        33 ~~S~~F~~~f~~~~~e~~-~~i~l~~~--~~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------L~~~c~~  103 (109)
T 2vkp_A           33 VGSSVFYAMFYGDLAEVK-SEIHIPDV--EPAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPA------LAKACVN  103 (109)
T ss_dssp             HHCHHHHHHHC------C-CEEEETTS--CHHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred             HcCHHHHHHhcCCcccCC-CeEEeCCC--CHHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence            489999999986433223 67888876  48999999999999999999999999999999999995      9999999


Q ss_pred             Hhhhh
Q 015578           82 FLTLV   86 (404)
Q Consensus        82 fL~~~   86 (404)
                      ||.+.
T Consensus       104 ~l~~~  108 (109)
T 2vkp_A          104 FLETS  108 (109)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            99864

>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A

Probab=98.43  E-value=2.7e-07  Score=77.52  Aligned_cols=73  Identities=18%  Similarity=0.266  Sum_probs=65.2

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||++++..     +..+|.|+|++  +++|+.+.+|+|++++.+++.|+..+..||++++|.+      |....+.
T Consensus        49 a~S~yF~~~f~~-----~~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~  115 (121)
T 1buo_A           49 CTSKMFEILFHR-----NSQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEY------LEEQCLK  115 (121)
T ss_dssp             HHCHHHHHHTTS-----CCSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHH------HHHHHHH
T ss_pred             hcCHHHHHHHcC-----CCcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHH------HHHHHHH
Confidence            589999999975     23478888876  8999999999999999999999999999999999995      9999999


Q ss_pred             Hhhhhh
Q 015578           82 FLTLVI   87 (404)
Q Consensus        82 fL~~~v   87 (404)
                      ||.+.+
T Consensus       116 ~l~~~I  121 (121)
T 1buo_A          116 MLETIQ  121 (121)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            998753

>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A

Probab=98.37  E-value=3.7e-07  Score=76.18  Aligned_cols=75  Identities=12%  Similarity=0.288  Sum_probs=62.6

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||+.++...-.+....+|.|++++  +++|+.+.+|+|++++.+++.|+..+..||++++|.+      |....+.
T Consensus        46 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~  117 (120)
T 2if5_A           46 ACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPA------VSHVCAD  117 (120)
T ss_dssp             HHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred             HhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence            4799999999864332244578888764  8999999999999999999999999999999999995      9999999


Q ss_pred             Hhh
Q 015578           82 FLT   84 (404)
Q Consensus        82 fL~   84 (404)
                      ||+
T Consensus       118 ~L~  120 (120)
T 2if5_A          118 LLD  120 (120)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            984

>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}

Probab=98.36  E-value=3.1e-07  Score=77.03  Aligned_cols=73  Identities=21%  Similarity=0.218  Sum_probs=63.2

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||+.++....    ..+|.|+|++  +++|+.+.+|+|++++.+++.|+..+..||++++|.+      |....+.
T Consensus        45 a~S~yF~~~f~~~~----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~  112 (119)
T 3b84_A           45 CCSHFFQSLYGDGS----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPE------AVELCQS  112 (119)
T ss_dssp             HHCHHHHHHHTTTT----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred             hcCHHHHHHHCCCC----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence            47999999998643    3578888877  8999999999999999999999999999999999995      9999999


Q ss_pred             Hhhhh
Q 015578           82 FLTLV   86 (404)
Q Consensus        82 fL~~~   86 (404)
                      ||.+.
T Consensus       113 ~l~~~  117 (119)
T 3b84_A          113 FKPKT  117 (119)
T ss_dssp             CC---
T ss_pred             HHHHc
Confidence            99764

>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}

Probab=98.34  E-value=7.8e-07  Score=78.07  Aligned_cols=105  Identities=13%  Similarity=0.110  Sum_probs=81.3

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||++++.....+....+|.|+|++  +++|+.+.+|+|++++.+++.|+..+..+|++++|.+      |...++.
T Consensus        55 ~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~  126 (172)
T 3htm_A           55 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED  126 (172)
T ss_dssp             HHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred             HcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence            5799999999864332244688898874  8999999999999999999999999999999999995      9999999


Q ss_pred             HhhhhhccChHHHHHHHhhhccccchhhhh---hhHHHHHHHHHH
Q 015578           82 FLTLVILSSWKETITVLKSCKNLSPWAENL---QIVRRCCDSIAW  123 (404)
Q Consensus        82 fL~~~v~~sW~dsi~vL~sc~~llp~AE~l---~Iv~RCidsla~  123 (404)
                      ||.+.+  +-..++.+       +.+|+..   .+...|.+-|+.
T Consensus       127 ~l~~~l--~~~n~~~~-------~~~A~~~~~~~L~~~~~~~i~~  162 (172)
T 3htm_A          127 ALCSNL--SVENAAEI-------LILADLHSADQLKTQAVDFINY  162 (172)
T ss_dssp             HHHHTC--CTTTHHHH-------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHhC--CHHHHHHH-------HHHHHHhCcHHHHHHHHHHHHH
Confidence            999754  22333333       3444443   366778777764

>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}

Probab=98.30  E-value=8.6e-07  Score=73.60  Aligned_cols=72  Identities=18%  Similarity=0.346  Sum_probs=61.4

Q ss_pred             ccccHHHHHHcCCCCCCCccceeec--CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLE--NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT   79 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~--dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~t   79 (404)
                      ++|.||+.++...+    ...|.|+  |+  .+++|+.+.+|+|++++.+++.||..+..||++++|.+      |....
T Consensus        43 a~S~yF~~~f~~~~----~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~------L~~~C  110 (116)
T 2vpk_A           43 SFSEYFGAIYRSTS----ENNVFLDQSQV--KADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEE------VVTKC  110 (116)
T ss_dssp             HHCHHHHHHHTTCC----CSCEECCTTTC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred             hcCHHHHHHHcCCC----CCeEEeecCCC--CHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHH
Confidence            57999999998652    2355555  54  58999999999999999999999999999999999985      99999


Q ss_pred             HHHhhh
Q 015578           80 EAFLTL   85 (404)
Q Consensus        80 E~fL~~   85 (404)
                      +.||.+
T Consensus       111 ~~~l~~  116 (116)
T 2vpk_A          111 KIKMED  116 (116)
T ss_dssp             HHHHC-
T ss_pred             HHHHhC
Confidence            999863

>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A

Probab=98.27  E-value=1.2e-06  Score=73.83  Aligned_cols=75  Identities=17%  Similarity=0.302  Sum_probs=65.3

Q ss_pred             ccccHHHHHHcCCCCCCCccceee-cCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE   80 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l-~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE   80 (404)
                      ++|.||++++.....+ ....|.| +++  .+++|+.+.+|+|.+++.+++.|+..|..+|++++|.+      |....+
T Consensus        50 a~S~~F~~~f~~~~~e-~~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~  120 (127)
T 1r29_A           50 ACSGLFYSIFTDQLKR-NLSVINLDPEI--NPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCR  120 (127)
T ss_dssp             HHCHHHHHHHTSTTTT-TCSEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHH
T ss_pred             HhCHHHHHHhcCCccC-CCCEEEeCCCC--CHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence            5799999999865433 4567888 665  58999999999999999999999999999999999995      999999


Q ss_pred             HHhhh
Q 015578           81 AFLTL   85 (404)
Q Consensus        81 ~fL~~   85 (404)
                      .||.+
T Consensus       121 ~~l~~  125 (127)
T 1r29_A          121 KFIKA  125 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            99875

>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}

Probab=98.23  E-value=1.1e-06  Score=76.48  Aligned_cols=75  Identities=20%  Similarity=0.277  Sum_probs=62.7

Q ss_pred             ccccHHHHHHcCCCCC--CCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHH
Q 015578            2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT   79 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~--~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~t   79 (404)
                      ++|.||+.++......  ....+|.|+|++  +++|+.+.+|+|.+++.+++.||..|..||++++|.+      |....
T Consensus        68 a~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C  139 (144)
T 2ppi_A           68 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC  139 (144)
T ss_dssp             HHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred             HcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHH
Confidence            4799999999753211  134578888876  9999999999999999999999999999999999995      89998


Q ss_pred             HHHhh
Q 015578           80 EAFLT   84 (404)
Q Consensus        80 E~fL~   84 (404)
                      +.||.
T Consensus       140 ~~~L~  144 (144)
T 2ppi_A          140 CEFLE  144 (144)
T ss_dssp             HTTC-
T ss_pred             HHHhC
Confidence            88873

>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}

Probab=98.22  E-value=5.7e-07  Score=77.24  Aligned_cols=74  Identities=19%  Similarity=0.228  Sum_probs=62.0

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||+.++....    ..+|.|+|++  +++|+.+.+|+|.+++.+++.||..|..||++|+|.+      |.+..+.
T Consensus        46 a~S~yF~~mf~~~~----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~  113 (135)
T 2yy9_A           46 CCSHFFQRIYGDGT----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPE------AVELCQS  113 (135)
T ss_dssp             HHCHHHHHTCC--------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred             HhCHHHHHHHcCCC----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence            47899999988633    3478888877  8999999999999999999999999999999999995      9999999


Q ss_pred             Hhhhhh
Q 015578           82 FLTLVI   87 (404)
Q Consensus        82 fL~~~v   87 (404)
                      ||.+..
T Consensus       114 ~l~~~l  119 (135)
T 2yy9_A          114 FQPQTS  119 (135)
T ss_dssp             CCC---
T ss_pred             HHHHhc
Confidence            998754

>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}

Probab=98.21  E-value=2.1e-06  Score=73.77  Aligned_cols=76  Identities=16%  Similarity=0.287  Sum_probs=65.2

Q ss_pred             ccccHHHHHHcCCCCCCCccceeec-CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE   80 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE   80 (404)
                      ++|.||+.++.....  +...|.++ ++  .+++|+.+.+|+|++++.+++.||..|..||++|+|.+      |....+
T Consensus        57 a~S~yF~~~f~~~~~--e~~~i~l~~~v--~~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~  126 (138)
T 2z8h_A           57 ACSSYFHSRIVGQTD--AELTVTLPEEV--TVKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHN------IEESCF  126 (138)
T ss_dssp             HHCHHHHHHHTTCCC--TTEEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGG------GHHHHH
T ss_pred             HcCHHHHHHHhcCCC--CCceEEeCCCC--CHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence            589999999986542  23467774 55  48999999999999999999999999999999999996      999999


Q ss_pred             HHhhhhh
Q 015578           81 AFLTLVI   87 (404)
Q Consensus        81 ~fL~~~v   87 (404)
                      .||.+.+
T Consensus       127 ~~l~~~l  133 (138)
T 2z8h_A          127 QFLKFKF  133 (138)
T ss_dssp             HHTTCCC
T ss_pred             HHHHHhc
Confidence            9998755

>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}

Probab=98.20  E-value=5.2e-07  Score=76.56  Aligned_cols=73  Identities=23%  Similarity=0.405  Sum_probs=57.0

Q ss_pred             ccccHHHHHHcCCCCCCCccceeec-CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE   80 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE   80 (404)
                      ++|.||+.++...    ...+|.|+ +++  +++|+.+.+|+|.+++++++.|+..+..||++|+|.+      |.+..+
T Consensus        54 a~S~~F~~~f~~~----~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C~  121 (129)
T 3ga1_A           54 ASSSYFRDLFNNS----RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKGT  121 (129)
T ss_dssp             HHBHHHHHHHHHC----CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTT------SSCC--
T ss_pred             HcCHHHHHHHcCC----CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence            4799999999865    23477785 665  8999999999999999999999999999999999996      888888


Q ss_pred             HHhhhh
Q 015578           81 AFLTLV   86 (404)
Q Consensus        81 ~fL~~~   86 (404)
                      .||.++
T Consensus       122 ~~L~~~  127 (129)
T 3ga1_A          122 EFFLKV  127 (129)
T ss_dssp             ------
T ss_pred             HHHHHh
Confidence            888764

>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A

Probab=98.19  E-value=1e-06  Score=73.88  Aligned_cols=70  Identities=19%  Similarity=0.362  Sum_probs=61.0

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||+.++...     ...|.++++  .+++|+.+.+|+|++++.+++.|+..+..+|++|+|.+      |.+..+.
T Consensus        48 a~S~yF~~~f~~~-----~~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~------L~~~C~~  114 (119)
T 2q81_A           48 ACSEYFKMLFVDQ-----KDVVHLDIS--NAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD------IITACHA  114 (119)
T ss_dssp             HHCHHHHHHHHHC-----CSGGGGGGC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred             HcCHHHHHHHcCC-----CCEEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence            5799999999862     235666654  58999999999999999999999999999999999995      9999999


Q ss_pred             Hhh
Q 015578           82 FLT   84 (404)
Q Consensus        82 fL~   84 (404)
                      ||.
T Consensus       115 ~l~  117 (119)
T 2q81_A          115 LKS  117 (119)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            985

>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}

Probab=98.16  E-value=5.6e-07  Score=76.84  Aligned_cols=93  Identities=11%  Similarity=0.073  Sum_probs=63.0

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||++++.....+....+|.|+|+  .+++|+.+.+|+|++++.+++.|+..+..+|++++|.+      |...++.
T Consensus        46 ~~S~~F~~~f~~~~~e~~~~~i~l~~~--~~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~  117 (145)
T 4eoz_A           46 ARSPVFSAMFEHEMEESKKNRVEINDV--EPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED  117 (145)
T ss_dssp             HHCHHHHHHHHSSSHHHHHTEEEECSS--CHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHC
T ss_pred             HcCHHHHHHHcCCCcCCCCceEEecCC--CHHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence            579999999986432213357888886  48999999999999999999999999999999999995      9999999


Q ss_pred             HhhhhhccChHHHHHHHhhhccccchhhhh
Q 015578           82 FLTLVILSSWKETITVLKSCKNLSPWAENL  111 (404)
Q Consensus        82 fL~~~v~~sW~dsi~vL~sc~~llp~AE~l  111 (404)
                      ||.+.+-         ...|-.++.+|+..
T Consensus       118 ~l~~~l~---------~~n~~~~l~~A~~~  138 (145)
T 4eoz_A          118 ALCSNLS---------VENAAEILILADLH  138 (145)
T ss_dssp             C-----------------------------
T ss_pred             HHHHhCC---------HHHHHHHHHHHHHh
Confidence            9987541         12444555555544

>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A

Probab=98.10  E-value=1.2e-06  Score=73.62  Aligned_cols=63  Identities=19%  Similarity=0.286  Sum_probs=54.2

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecC-CCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcc
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLEN-FPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSE   68 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~d-fPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE   68 (404)
                      ++|.||+.++.....  +..+|.++| +  .+++|+.+.+|+|.+++.+++.||..+..||++|+|.+
T Consensus        53 a~S~yF~~~f~~~~~--e~~~i~l~~~~--~~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~  116 (125)
T 3ohu_A           53 ACSEYFWQALVGQTK--NDLVVSLPEEV--TARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHN  116 (125)
T ss_dssp             HHBHHHHHHHTTCCC--SSCEEECCTTC--CHHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSS
T ss_pred             HcCHHHHHHhcCCCC--CCcEEEeCCCC--CHHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHH
Confidence            479999999986543  245677765 4  58999999999999999999999999999999999986

>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}

Probab=97.91  E-value=3.6e-06  Score=70.94  Aligned_cols=73  Identities=16%  Similarity=0.282  Sum_probs=58.9

Q ss_pred             ccccHHHHHHcCCCCCCCccceeec-CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE   80 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE   80 (404)
                      ++|.||+.++.....  +..+|.++ ++  .+++|+.+.+|+|++++.+++.||..+..||++++|.+      |....+
T Consensus        50 a~S~yF~~mf~~~~~--e~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~  119 (124)
T 2ihc_A           50 ACSSYFHSRIVGQAD--GELNITLPEEV--TVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHN------IEESCF  119 (124)
T ss_dssp             HHBHHHHHHHTTC-----CEEEECCTTS--CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSS------CCGGGG
T ss_pred             HcCHHHHHHHcCCCC--CCceEeecCCc--CHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHH------HHHHHH
Confidence            589999999986442  23467774 44  58999999999999999999999999999999999995      777777


Q ss_pred             HHhh
Q 015578           81 AFLT   84 (404)
Q Consensus        81 ~fL~   84 (404)
                      .||.
T Consensus       120 ~~l~  123 (124)
T 2ihc_A          120 QFLK  123 (124)
T ss_dssp             GTC-
T ss_pred             HHHh
Confidence            7663

>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0

Probab=97.83  E-value=1.1e-05  Score=68.13  Aligned_cols=57  Identities=23%  Similarity=0.273  Sum_probs=50.6

Q ss_pred             cceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHHHhhh
Q 015578           21 YDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTL   85 (404)
Q Consensus        21 ~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~   85 (404)
                      ..|.|+|++  +++|+.+.+|+|.++++++..||..+..||++|+|.+      |....+.++.+
T Consensus        61 ~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~------l~~~C~~~~~~  117 (119)
T 3m5b_A           61 QWALGEGIS--PSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQS------LEEACWRARGD  117 (119)
T ss_dssp             EEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred             CEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence            467888876  8999999999999999999999999999999999995      88989888765

>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A

Probab=97.80  E-value=2.1e-05  Score=75.86  Aligned_cols=106  Identities=12%  Similarity=0.106  Sum_probs=82.0

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||+.++...-.+....+|.|+|++  +++|+...+|+|+.++.++..|+..|-.||++++|..      |...+|.
T Consensus       195 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~  266 (312)
T 3hqi_A          195 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED  266 (312)
T ss_dssp             HHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred             HcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence            5799999999864332245689999874  8999999999999999999999999999999999984      9999999


Q ss_pred             HhhhhhccChHHHHHHHhhhccccchhhhh---hhHHHHHHHHHHH
Q 015578           82 FLTLVILSSWKETITVLKSCKNLSPWAENL---QIVRRCCDSIAWK  124 (404)
Q Consensus        82 fL~~~v~~sW~dsi~vL~sc~~llp~AE~l---~Iv~RCidsla~k  124 (404)
                      ||.+.+-.         .+|-.++.+|+..   .+..+|++-|+..
T Consensus       267 ~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~~  303 (312)
T 3hqi_A          267 ALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINYH  303 (312)
T ss_dssp             HHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred             HHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            99875421         2344445556654   4778898888753

>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A

Probab=97.79  E-value=1.7e-05  Score=66.28  Aligned_cols=60  Identities=20%  Similarity=0.283  Sum_probs=53.4

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCcc-ccCCcchHHHHhhHhhhcCcc
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPI-AFNPNNIAPLRCASEFLDMSE   68 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i-~lt~~NVa~LrCAAeyLeMtE   68 (404)
                      ++|.||+.++...     ..+|.|++++  +++|+.+.+|+|++++ ++++.|+..+..||++++|..
T Consensus        52 a~S~~F~~~f~~~-----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~  112 (116)
T 3fkc_A           52 ASSTYFHQLFSVA-----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKF  112 (116)
T ss_dssp             HHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHH
T ss_pred             HcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccc
Confidence            5799999999863     3478888876  8999999999999999 799999999999999999974

>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*

Probab=96.49  E-value=0.0042  Score=50.51  Aligned_cols=62  Identities=21%  Similarity=0.288  Sum_probs=47.3

Q ss_pred             ccccHHHHHHcCCCCC--CCccceeecCCCCChHHHHHHHHhhc-----C---Cccc---cCCcchHHHHhhHhhhc
Q 015578            2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCY-----G---LPIA---FNPNNIAPLRCASEFLD   65 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~--~~~~~i~l~dfPGGaeaFEl~akFCY-----g---~~i~---lt~~NVa~LrCAAeyLe   65 (404)
                      ..|++||.++....+.  .....|.|++++  +.+++.+..|||     .   ..+.   |++.|+--|-.||.||+
T Consensus        22 ~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~   96 (97)
T 4ajy_C           22 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD   96 (97)
T ss_dssp             TTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHT
T ss_pred             HHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhC
Confidence            4699999999864321  124467777654  789999999999     3   4555   99999999999999997

>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D

Probab=93.98  E-value=0.047  Score=47.27  Aligned_cols=74  Identities=15%  Similarity=0.224  Sum_probs=61.0

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCc--------------------------cccCCcchH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNNIA   55 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~--------------------------i~lt~~NVa   55 (404)
                      ..|++||.++....    ...|.|++++  +.+++.+..|||--.                          +.++..++-
T Consensus        22 ~~S~~ik~ml~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~   95 (141)
T 1fs1_B           22 KQSVTIKTMLEDLG----MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLF   95 (141)
T ss_dssp             GTCHHHHHHHHHTC----CSSEECTTCC--HHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHH
T ss_pred             HHhHHHHHHHHhcC----CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHH
Confidence            57999999998643    2367788765  579999999999422                          678999999


Q ss_pred             HHHhhHhhhcCccccCCCchHHHHHHHhhhhh
Q 015578           56 PLRCASEFLDMSEEYEDGNLISKTEAFLTLVI   87 (404)
Q Consensus        56 ~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~~v   87 (404)
                      -|-.||.||++.      .|+.-+-.|+...+
T Consensus        96 eLi~AAnyL~I~------~Lldl~c~~vA~~i  121 (141)
T 1fs1_B           96 ELILAANYLDIK------GLLDVTCKTVANMI  121 (141)
T ss_dssp             HHHHHHHHHTCH------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhh------HHHHHHHHHHHHHH
Confidence            999999999999      49999999988765

>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*

Probab=93.86  E-value=0.017  Score=51.07  Aligned_cols=94  Identities=16%  Similarity=0.263  Sum_probs=49.2

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCc---------------------------cccCCcch
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP---------------------------IAFNPNNI   54 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~---------------------------i~lt~~NV   54 (404)
                      ..|++|+.++....   ....|.|++++|  .+++.+..|||--.                           +.+++.++
T Consensus        24 ~~S~~ik~ml~~~~---~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l   98 (160)
T 2p1m_A           24 LESQTIAHMVEDDC---VDNGVPLPNVTS--KILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATL   98 (160)
T ss_dssp             HTCTTTC---------------CCTTSCH--HHHHHHHHC----------------------------------------
T ss_pred             HHhHHHHHHHHccC---CCCceeCCcCcH--HHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHH
Confidence            46889999987643   223677777665  89999999999533                           47899999


Q ss_pred             HHHHhhHhhhcCccccCCCchHHHHHHHhhhhhc-cChHHHHHHHhhhccccc
Q 015578           55 APLRCASEFLDMSEEYEDGNLISKTEAFLTLVIL-SSWKETITVLKSCKNLSP  106 (404)
Q Consensus        55 a~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~~v~-~sW~dsi~vL~sc~~llp  106 (404)
                      --|-.||.||+|.      .|+.-+-.|+...+- .+-.+.-..+.=-..+-|
T Consensus        99 ~eLi~AAnyL~I~------~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~  145 (160)
T 2p1m_A           99 FELILAANYLNIK------NLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTP  145 (160)
T ss_dssp             --CHHHHHHTTCH------HHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCH
T ss_pred             HHHHHHHHHHhHH------HHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence            9999999999999      499999999987663 344444443332233444

>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*

Probab=86.01  E-value=0.94  Score=40.32  Aligned_cols=78  Identities=8%  Similarity=0.117  Sum_probs=55.5

Q ss_pred             ccccHHHHHHcCCCCC----CCccceeecCCCCChHHHHHHHHhhcCCc-------------------------cccCCc
Q 015578            2 SKCGYIARLELQPSIS----NLGYDLKLENFPGGSETFEIILKFCYGLP-------------------------IAFNPN   52 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~----~~~~~i~l~dfPGGaeaFEl~akFCYg~~-------------------------i~lt~~   52 (404)
                      ..|+.|+.++......    .+...|.|++++  +.+++.|..|||--+                         +.+.+.
T Consensus        27 ~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~  104 (169)
T 3v7d_A           27 ERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQE  104 (169)
T ss_dssp             TTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHH
T ss_pred             HHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCHH
Confidence            4699999999865431    122567788765  689999999998311                         356667


Q ss_pred             chHHHHhhHhhhcCccccCCCchHHHHHHHhhhhh
Q 015578           53 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI   87 (404)
Q Consensus        53 NVa~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~~v   87 (404)
                      .+--|-.||.||+|.      .|+.-+=+++...+
T Consensus       105 ~LfeLi~AAnyLdIk------~Lldl~c~~vA~~i  133 (169)
T 3v7d_A          105 MLYEIILAANYLNIK------PLLDAGCKVVAEMI  133 (169)
T ss_dssp             HHHHHHHHHHHTTCH------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcH------HHHHHHHHHHHHHH
Confidence            778899999999999      48888777776554

>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B

Probab=84.60  E-value=0.59  Score=37.74  Aligned_cols=63  Identities=19%  Similarity=0.264  Sum_probs=45.1

Q ss_pred             ccccHHHHHHcCCCC-C-CCccceeecCCCCChHHHHHHHHhhcCC-----------ccccCCcchHHHHhhHhhhcC
Q 015578            2 SKCGYIARLELQPSI-S-NLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM   66 (404)
Q Consensus         2 SkSg~l~rl~~~~~~-~-~~~~~i~l~dfPGGaeaFEl~akFCYg~-----------~i~lt~~NVa~LrCAAeyLeM   66 (404)
                      ..|++||.++...+. . .....|.|++++  +.+++.+..|||--           .+.+.+..+--|--||.||++
T Consensus        21 ~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI   96 (96)
T 2fnj_C           21 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC   96 (96)
T ss_dssp             TTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred             HHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence            479999999987543 1 122467777655  57999999999831           246788888889999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	404
d1buoa_	121	Promyelocytic leukaemia zinc finger (PLZF) protein	98.51
d1r29a_	122	B-cell lymphoma 6 (Bcl6) protein BTB domain {Human	98.5
d1hv2a_	99	Elongin C {Baker's yeast (Saccharomyces cerevisiae	80.13

>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=5.9e-08  Score=80.67  Aligned_cols=72  Identities=18%  Similarity=0.288  Sum_probs=64.2

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||+.++.+.     ..++.+++++  +++|+.+.+|+|.+++++++.|+..+..||++|+|.+      |.+..+.
T Consensus        49 a~S~~F~~lf~~~-----~~~i~~~~v~--~~~f~~ll~~~Ytg~i~l~~~~v~~ll~~A~~l~~~~------L~~~C~~  115 (121)
T d1buoa_          49 CTSKMFEILFHRN-----SQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEY------LEEQCLK  115 (121)
T ss_dssp             HHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHH------HHHHHHH
T ss_pred             ccChhhhhhccCc-----cceeecCCCC--HHHHHHHHHheEccccCCcHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence            5799999999642     3478888875  8999999999999999999999999999999999996      9999999


Q ss_pred             Hhhhh
Q 015578           82 FLTLV   86 (404)
Q Consensus        82 fL~~~   86 (404)
                      ||+++
T Consensus       116 ~L~~i  120 (121)
T d1buoa_         116 MLETI  120 (121)
T ss_dssp             HHHHH
T ss_pred             HHHhC
Confidence            99764

>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=6.3e-08  Score=80.03  Aligned_cols=76  Identities=18%  Similarity=0.269  Sum_probs=61.6

Q ss_pred             ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578            2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA   81 (404)
Q Consensus         2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~   81 (404)
                      ++|.||+.++.....+.....+.+++  -.|++|+.+.+|+|+++++++..||..+..||+||+|.+      |...++.
T Consensus        46 ~~S~~F~~~f~~~~~e~~~~~~~~~~--v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~  117 (122)
T d1r29a_          46 ACSGLFYSIFTDQLKRNLSVINLDPE--INPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCRK  117 (122)
T ss_dssp             HHCHHHHHHHTSTTTTTCSEEECCTT--SCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred             hCCHHHHHHhccchhhhcceeeeecc--cCHHHHHHHHhhhcCCeecCchhhHHHHHHHHHHHCcHH------HHHHHHH
Confidence            47999999997544331222233344  458999999999999999999999999999999999995      9999999


Q ss_pred             Hhhh
Q 015578           82 FLTL   85 (404)
Q Consensus        82 fL~~   85 (404)
                      ||..
T Consensus       118 ~L~~  121 (122)
T d1r29a_         118 FIKA  121 (122)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            9975

>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Elongin C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.13  E-value=1.1  Score=34.38  Aligned_cols=61  Identities=13%  Similarity=0.146  Sum_probs=44.4

Q ss_pred             cccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhc--------C------CccccCCcchHHHHhhHhhhcC
Q 015578            3 KCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCY--------G------LPIAFNPNNIAPLRCASEFLDM   66 (404)
Q Consensus         3 kSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCY--------g------~~i~lt~~NVa~LrCAAeyLeM   66 (404)
                      .|+.+++++.....+ +...|.|++++  +++++.+..||+        .      -.+.+.+...--|-.||.||++
T Consensus        25 ~S~tI~~ml~~~~~e-~~~~Ipl~~V~--s~iL~kViey~~~h~~~~~~~~~~~~~~efdvd~~~l~eLi~AAnyLdI   99 (99)
T d1hv2a_          25 ISPTLKAMIEGPFRE-SKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI   99 (99)
T ss_dssp             TCHHHHHHHHSSTTT-CTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred             HhHHHHHHHHccCCC-CcCccccCCCC--hHHHHHHHHHHHHhhhCcCcccccccCCCCCCCHHHHHHHHHHHhhhCC
Confidence            589999999865432 34467777765  689999999997        1      1355555666777899999975