Citrus Sinensis ID: 015684
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 402 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FMK9 | 389 | Probable inactive purple | yes | no | 0.898 | 0.928 | 0.709 | 1e-152 | |
| Q84LR6 | 401 | Probable inactive purple | no | no | 0.912 | 0.915 | 0.557 | 1e-109 | |
| Q9LU72 | 397 | Probable inactive purple | no | no | 0.905 | 0.916 | 0.481 | 3e-98 | |
| Q05924 | 578 | Phosphatase DCR2 OS=Sacch | yes | no | 0.748 | 0.520 | 0.357 | 6e-37 | |
| O59759 | 509 | Uncharacterized protein C | yes | no | 0.733 | 0.579 | 0.307 | 9e-27 | |
| Q9SR79 | 367 | Probable inactive purple | no | no | 0.778 | 0.852 | 0.267 | 4e-21 | |
| Q12212 | 622 | Protein SIA1 OS=Saccharom | no | no | 0.626 | 0.405 | 0.244 | 1e-12 | |
| Q6CPQ2 | 578 | Protein SIA1 OS=Kluyverom | no | no | 0.703 | 0.489 | 0.238 | 2e-11 |
| >sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/365 (70%), Positives = 292/365 (80%), Gaps = 4/365 (1%)
Query: 17 LTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDL 76
L LC++P A Q RKLRF NGEFKILQVADMHFANG T C +VLPSQ A CSDL
Sbjct: 22 LACLCLSPIPAT--AQRRKLRFSVNGEFKILQVADMHFANGAKTQCQNVLPSQRAHCSDL 79
Query: 77 NTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136
NTT F++R+I+AEKPDLIVFTGDNIFGFD DA KS+NAAFAPAIAS IPWVA+LGNHDQ
Sbjct: 80 NTTIFMSRVIAAEKPDLIVFTGDNIFGFDVKDALKSINAAFAPAIASKIPWVAILGNHDQ 139
Query: 137 ESTLSREGVMKHIVTLKNTLSQVNPSD-AHIIDGFGNYNLEIGGVKGSGFENKSVLNLYF 195
EST +R+ VM HIV L NTLSQVNP + AH IDGFGNYNL+I G S +NKSVLNLYF
Sbjct: 140 ESTFTRQQVMNHIVKLPNTLSQVNPPEAAHYIDGFGNYNLQIHGAADSKLQNKSVLNLYF 199
Query: 196 LDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPE 255
LDSGDYS+VP + GY WIK SQQFWF++TS RL+R Y +KP Q+ APGL YFHIPLPE
Sbjct: 200 LDSGDYSSVPYMEGYDWIKTSQQFWFDRTSKRLKREYNAKPNPQEGIAPGLAYFHIPLPE 259
Query: 256 FAYFDQSNFT-GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
F FD N T GVRQEG S+AS NSGFFTT++A GDVK+VF GHDHVNDFCG L G+ LC
Sbjct: 260 FLSFDSKNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLC 319
Query: 315 YGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLW 374
YGGGFGYHAYGKAGWERRARVVV L K K WG VKSIKTWKRLDD+HL+ +D VLW
Sbjct: 320 YGGGFGYHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLW 379
Query: 375 SKTSS 379
+ +++
Sbjct: 380 NNSAN 384
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q84LR6|PPA14_ARATH Probable inactive purple acid phosphatase 14 OS=Arabidopsis thaliana GN=PAP14 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/375 (55%), Positives = 264/375 (70%), Gaps = 8/375 (2%)
Query: 12 VIVAVLTLLCIAPTLAVNAKQ--ERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQ 69
V+ L LC++ T V+A R+LRF +G FKILQV+DMH+ GK T C DV P++
Sbjct: 13 VLSVSLIYLCLS-TCHVSAFDFGRRQLRFNTDGRFKILQVSDMHYGFGKETQCSDVSPAE 71
Query: 70 VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF-DATDAAKSLNAAFAPAIASNIPWV 128
CSDLNTT+F+ R I++EKPDLIVF+GDN++G + +D AKS++ AFAPAI S IPWV
Sbjct: 72 FPYCSDLNTTSFLQRTIASEKPDLIVFSGDNVYGLCETSDVAKSMDMAFAPAIESGIPWV 131
Query: 129 AVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHI--IDGFGNYNLEIGGVKGSGFE 186
A+LGNHDQES ++RE +MK+I+ L N+LSQVNP DA + IDGFGNYNL+I G GS
Sbjct: 132 AILGNHDQESDMTRETMMKYIMKLPNSLSQVNPPDAWLYQIDGFGNYNLQIEGPFGSPLF 191
Query: 187 NKSVLNLYFLDSGDYSTVPSVP-GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPG 245
KS+LNLY LD G Y+ + Y W+K SQQ W+E TS L+ + P Q + APG
Sbjct: 192 FKSILNLYLLDGGSYTKLDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPG 251
Query: 246 LVYFHIPLPEFAYFDQS-NFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDF 304
LVY HIP+PEFA F++S TGVRQE S +NSGFFT +V G+VK VF+GHDHVNDF
Sbjct: 252 LVYLHIPMPEFALFNKSTEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDF 311
Query: 305 CGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEH 364
C L GI LCY GG GYH YG+ GW RR RVV A LEKT WG V +IKTWKRLDD++
Sbjct: 312 CAELHGINLCYAGGAGYHGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKN 371
Query: 365 LTGVDGHVLWSKTSS 379
+ +D +LW+K ++
Sbjct: 372 HSLIDTQLLWTKNTT 386
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LU72|PPA28_ARATH Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (920), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/395 (48%), Positives = 238/395 (60%), Gaps = 31/395 (7%)
Query: 7 KKPALVIVAVLTLL-----CIAPTLAVNAKQER-------KLRFRQNGEFKILQVADMHF 54
K L + +++LL I+ L +N + R LRFR +G FKILQVADMHF
Sbjct: 9 KHTVLYLTLIVSLLYFIESLISHKLHINYNKIRLKRSPNLPLRFRDDGTFKILQVADMHF 68
Query: 55 ANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLN 114
G T C DVL S+ CSDLNTT F+ RMI +E+PDLI FTGDNIFG TDAA+SL
Sbjct: 69 GMGMITRCRDVLDSEFEYCSDLNTTRFLRRMIESERPDLIAFTGDNIFGSSTTDAAESLL 128
Query: 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP--------SDAHI 166
A PAI IPW AVLGNHD ESTL+R +M + + ++SQ+NP +
Sbjct: 129 EAIGPAIEYGIPWAAVLGNHDHESTLNRLELMTFLSLMDFSVSQINPLVEDETKGDTMRL 188
Query: 167 IDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSA 226
IDGFGNY + + G GS N +V +L+F DSGD V YGWIK SQ W + TS
Sbjct: 189 IDGFGNYRVRVYGAPGSVLANSTVFDLFFFDSGDREIVQGKRTYGWIKESQLRWLQDTSI 248
Query: 227 R--LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTT 284
+ QR +++ PA L +FHIP+ E + F G QEG++ + V SG T
Sbjct: 249 QGHSQRIHVNPPA--------LAFFHIPILEVRELWYTPFIGQFQEGVACSIVQSGVLQT 300
Query: 285 MVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTE 344
V+ G+VKA F GHDHVNDFCG L G+ CYGGGFGYHAYG+ W RRARV+ A L K
Sbjct: 301 FVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLGKG- 359
Query: 345 KRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379
+ W +K IKTWKRLDDE+L+ +D VLW + S
Sbjct: 360 RDTWEGIKLIKTWKRLDDEYLSKIDEQVLWETSDS 394
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q05924|DCR2_YEAST Phosphatase DCR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 171/347 (49%), Gaps = 46/347 (13%)
Query: 34 RKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDL 93
++L+ G+FKI+Q+AD+H G++ C+D P A +D T F+ +++ EKP L
Sbjct: 238 QRLQETDEGKFKIVQLADLHLGVGESE-CIDEYPKHEACKADPKTETFVQQVLDIEKPQL 296
Query: 94 IVFTGDNIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152
+VFTGD I G + D+ L A AP IA IPW V GNHD E +L+R + + L
Sbjct: 297 VVFTGDQIMGDRSIQDSETVLLKAVAPVIARKIPWAMVWGNHDDEGSLTRWQLSEIASVL 356
Query: 153 KNTLSQVNPSDAHI-IDGFGNYNLEIGGVKGSGFENKS----VLNLYFLDSGDYSTVPSV 207
+L + +P D H G GNY +I F N V LYFLDS YSTV +
Sbjct: 357 PYSLFKFSPHDTHDNTFGVGNYIYQI-------FSNNDTEVPVGTLYFLDSHKYSTVGKI 409
Query: 208 -PGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYF------- 259
PGY WIK SQ + E Y K + +FHIPLPE+
Sbjct: 410 YPGYDWIKESQWKYIED--------YHDVNLKFKT-GLSMAFFHIPLPEYLNIESKTHPG 460
Query: 260 DQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR----LTGIQLCY 315
+++ G+ +EG+++ NS TT+ V V GHDH ND+C R I LCY
Sbjct: 461 EKNPLIGMYKEGVTAPKYNSEGITTLDRLS-VDVVSCGHDHCNDYCLRDDSTPNKIWLCY 519
Query: 316 GGGFGYHAYGKAGW-ERRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361
GGG G Y G ERR R+ ++ + +I TWKRL+
Sbjct: 520 GGGGGEGGYAGYGGTERRIRIYEINVNEN---------NIHTWKRLN 557
|
Required for cell cycle progression. Has a role in the completion of START. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|O59759|YJM5_SCHPO Uncharacterized protein C1020.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.05 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 155/355 (43%), Gaps = 60/355 (16%)
Query: 24 PTLAVNAKQERKLRF-------RQNGEFKILQVADMHFANGKTTPCLDVLPSQVA-GC-S 74
PT ++ A + ++L + KILQ++D+H++N PC D P + A C +
Sbjct: 181 PTPSIEALKRKELSSVTLTYDDEEKKTIKILQLSDLHYSNSDR-PCRDPYPYETAEDCMA 239
Query: 75 DLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNH 134
D TTAF+N ++ E+PD ++ TGD I G + DA SL A +P + N+P+ GNH
Sbjct: 240 DAKTTAFVNELLQLEEPDFVLLTGDLINGDTSRDARSSLMKAVSPFVDYNVPFAVNFGNH 299
Query: 135 DQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLY 194
D LSRE + K LSQ+ P +I GN + GV + +Y
Sbjct: 300 DDLGDLSREELAK-------ILSQI-PGSMGLI---GN----VSGVGNFVLHSPRKFAIY 344
Query: 195 FLDS-GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253
LD+ GD S PGY I Q W SK A K + HIPL
Sbjct: 345 VLDTKGDTSNRRLCPGYDAITEDQLEWLS-----------SKVADFKYEPIQMAVLHIPL 393
Query: 254 PEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQL 313
EF + + G +E S S+ + + + GHDHVNDFC GI
Sbjct: 394 KEFC--ETEDLVGAFREP-CSYSICDPNTAKALKSLRIPLAIAGHDHVNDFC----GIHP 446
Query: 314 CYGGGFGYHAYGKAGWE-------RRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361
Y F + G RRARV L+ E ++++TWKRL+
Sbjct: 447 DYNTYFCFAGGAGFGGYGGHGGYVRRARVF--ELDPVE-------RAVRTWKRLE 492
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q9SR79|PPA16_ARATH Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 160/397 (40%), Gaps = 84/397 (21%)
Query: 7 KKPAL--VIVAVLTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLD 64
KKP+L +I+ VL++ PT + LR R+ FKI AD+HF T D
Sbjct: 2 KKPSLFQIIIIVLSI----PT--TTGRTVGNLRVREGSPFKIAIFADLHFGEDTWT---D 52
Query: 65 VLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSL--NAAFAPAIA 122
P Q D+N+ ++ ++ AE PD +V+ GD + + SL + A +P
Sbjct: 53 WGPGQ-----DVNSVNVMSAVLDAETPDFVVYLGDVVTANNIAIQNASLFWDKAISPTRD 107
Query: 123 SNIPWVAVLGNHDQESTL------------------------------SREGVMKHIVTL 152
IPW + GNHD S + +R +++ +
Sbjct: 108 RGIPWATLFGNHDDASFVWPLDWLSSSGIPPLRCPAASDDDGCTFRGTTRVELIQEEIKS 167
Query: 153 KNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGW 212
N LS S + NY L V+ S V LYFLDSG + P V
Sbjct: 168 SNALSYSMISPKELWPSVSNYVLL---VESSDHSKPPVALLYFLDSGG-GSYPEV----- 218
Query: 213 IKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFA------YFDQSNFTG 266
I +Q WF+ S L Y+ P L+++HIP + + +
Sbjct: 219 ISNAQVEWFKTKSNTLN-PYLR--------IPELIFWHIPSKAYKKVAPRLWITKPCVGS 269
Query: 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTG-IQLCYGGGFGYHAYG 325
+ +E + + +G + VKAVF GH+H D+C + LC+ GY YG
Sbjct: 270 INKEKVVAQEAENGMMRVLENRSSVKAVFVGHNHGLDWCCPYKDKLWLCFARHTGYGGYG 329
Query: 326 KAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDD 362
W R +R+ LE +E IKTW R++D
Sbjct: 330 N--WPRGSRI----LEISEMPF-----RIKTWIRMED 355
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q12212|SIA1_YEAST Protein SIA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 47/299 (15%)
Query: 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTG 98
R FKILQ+ D HF C D + + +++ T FI+R++++E PDL+V TG
Sbjct: 305 RGQRSFKILQITDFHFK------CTD---NSMTVINEIKTVNFIDRVLASENPDLVVITG 355
Query: 99 DNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQ 158
D + + D + P I++ IP+ LG D+ + + + I L T +
Sbjct: 356 DLLDSHNTIDYQTCIMKVVQPMISNKIPYAISLGVSDESNLATSAQIRDFIRNLPYTFNN 415
Query: 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQ 218
V + H+ +E+ K K+ L +D+ D + PS+
Sbjct: 416 VASEEGHMA-------IEVSFKKKL---TKNTLLERDIDTEDETN-----------PSEA 454
Query: 219 FWFEQTSARLQRAYMSKPAAQKAPAP-GLVYFHIPLPEF----------AYFDQSNFT-- 265
+F S ++ GL + + PL E+ Y ++S T
Sbjct: 455 LFFVFDSFAPVNNFLQDYNDLIGKIDFGLAFQYFPLSEYRPHGLFPIIGQYNERSTLTVD 514
Query: 266 GVRQEGISSASVNSGF---FTTMVAAGDVKAVFTGHDHVNDFCGRLTG-IQLCYGGGFG 320
R G S ++N F +++ ++K V GH+H ND C + + LCYGG G
Sbjct: 515 TPRSRGQVSMTINGKHYKSFLDILSLWNIKGVSCGHEHNNDCCLQSKNEMWLCYGGSAG 573
|
Involved in the activation of the plasma membrane proton-ATPase (PMA1) by glucose. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|Q6CPQ2|SIA1_KLULA Protein SIA1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SIA1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 140/356 (39%), Gaps = 73/356 (20%)
Query: 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGD 99
+ +FKILQ++D+HF + P + D FI+ +I E+PDL V TG
Sbjct: 274 KRADFKILQISDLHFGRHIVSDSRKEKPDSIFR-YDWPNVQFIHSVIRNERPDLAVITGH 332
Query: 100 NIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQ 158
F+ D + +P I++ IP++ G Q +T + ++ I +L L++
Sbjct: 333 IFKDFNKNLDYESQILKMVSPIISNGIPFLFTWG-EPQVTTEFKVNILNFIKSLPFCLNK 391
Query: 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPS-VPGYGWIKPSQ 217
+ +N + L L L +P+ PG SQ
Sbjct: 392 FD------------------------LKNSTYLMLPLL-------LPAKTPG------SQ 414
Query: 218 Q-----FWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGV---RQ 269
+ F F+ ++ ++ K L + H+PL E Y Q +F + Q
Sbjct: 415 KQIGTIFAFD-SNVTESYNFLDKFPRSPQSVYNLAFQHLPLHE--YRPQGSFALIGNYEQ 471
Query: 270 EGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQ--------LCYGGGFGY 321
+G ++ F ++ D+KA+ GH+H ND C G Q LCYGG GY
Sbjct: 472 KGSLDYIPHTKAFRNLLGEKDIKAISCGHEHGNDCCVLSDGKQQNLKNNMWLCYGGVTGY 531
Query: 322 HAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377
+E + R+ EK + I +WKR + D +WS+T
Sbjct: 532 ----DQAYESKVRIFKIDTEKND---------ITSWKRSIKDTSKVSDYQYIWSRT 574
|
May be involved in the activation of the plasma membrane proton-ATPase by glucose. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 402 | ||||||
| 118484121 | 392 | unknown [Populus trichocarpa] | 0.915 | 0.938 | 0.816 | 1e-180 | |
| 224130746 | 347 | predicted protein [Populus trichocarpa] | 0.863 | 1.0 | 0.847 | 1e-177 | |
| 255548145 | 379 | Phosphatase DCR2, putative [Ricinus comm | 0.940 | 0.997 | 0.779 | 1e-176 | |
| 358248738 | 404 | uncharacterized protein LOC100794167 [Gl | 0.922 | 0.918 | 0.738 | 1e-167 | |
| 296089042 | 381 | unnamed protein product [Vitis vinifera] | 0.900 | 0.950 | 0.762 | 1e-167 | |
| 225453688 | 712 | PREDICTED: probable inactive purple acid | 0.940 | 0.530 | 0.734 | 1e-167 | |
| 356573279 | 385 | PREDICTED: probable inactive purple acid | 0.900 | 0.940 | 0.760 | 1e-167 | |
| 449445527 | 382 | PREDICTED: probable inactive purple acid | 0.917 | 0.965 | 0.760 | 1e-166 | |
| 7208777 | 405 | putative PTS protein [Cicer arietinum] | 0.922 | 0.916 | 0.745 | 1e-166 | |
| 449520215 | 387 | PREDICTED: probable inactive purple acid | 0.922 | 0.958 | 0.756 | 1e-165 |
| >gi|118484121|gb|ABK93944.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/370 (81%), Positives = 326/370 (88%), Gaps = 2/370 (0%)
Query: 14 VAVLTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGC 73
V V +L P + K+E LRFR+NGEFKILQVADMHFA+GKTT CLDV P+Q+ C
Sbjct: 17 VVVFSLCFFVPKSVLGVKKE--LRFRKNGEFKILQVADMHFADGKTTSCLDVFPNQMPTC 74
Query: 74 SDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGN 133
SDLNTTAF+ RMI AEKPD IVFTGDNIFGFDATDAAKSL+AAF PAIASNIPW A+LGN
Sbjct: 75 SDLNTTAFVERMIQAEKPDFIVFTGDNIFGFDATDAAKSLSAAFQPAIASNIPWAAILGN 134
Query: 134 HDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNL 193
HDQESTLSREGVMKHIV LKNTLSQVNP++ HIIDGFGNYNLEIGGVKGS FENKS LNL
Sbjct: 135 HDQESTLSREGVMKHIVGLKNTLSQVNPAEVHIIDGFGNYNLEIGGVKGSRFENKSALNL 194
Query: 194 YFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253
YFLDSGDYSTVP++PGYGWIKPSQQ WF++TSA+L+RAYM +P AQK PAPGLVYFHIPL
Sbjct: 195 YFLDSGDYSTVPAIPGYGWIKPSQQLWFQRTSAKLRRAYMRQPEAQKGPAPGLVYFHIPL 254
Query: 254 PEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQL 313
PEFA FD SNFTGVRQEGISSASVNSGFFTTMV AGDVK VFTGHDH+NDFCG LTGIQL
Sbjct: 255 PEFASFDSSNFTGVRQEGISSASVNSGFFTTMVEAGDVKGVFTGHDHLNDFCGELTGIQL 314
Query: 314 CYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVL 373
CY GGFGYHAYGKAGW RRARVV+ASLEKTE+ GWG VKSIKTWKRLDDEHLT VDG VL
Sbjct: 315 CYAGGFGYHAYGKAGWSRRARVVLASLEKTEQGGWGAVKSIKTWKRLDDEHLTTVDGQVL 374
Query: 374 WSKTSSGNLR 383
WSK+ +G R
Sbjct: 375 WSKSHAGVRR 384
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224130746|ref|XP_002320917.1| predicted protein [Populus trichocarpa] gi|222861690|gb|EEE99232.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 294/347 (84%), Positives = 316/347 (91%)
Query: 34 RKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDL 93
++LRF +NGEFKILQVADMHFA+GKTTPCLDV P+Q+ CSDLNTTAF+ RMI AEKPD
Sbjct: 1 QELRFGKNGEFKILQVADMHFADGKTTPCLDVFPNQMRSCSDLNTTAFVERMIQAEKPDF 60
Query: 94 IVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153
IVFTGDNIFGFDATDAAKSLNAAF PAI SNIPW AVLGNHDQ+STLSREGVMKH+V LK
Sbjct: 61 IVFTGDNIFGFDATDAAKSLNAAFWPAIESNIPWAAVLGNHDQDSTLSREGVMKHVVGLK 120
Query: 154 NTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWI 213
NTLSQVNP+++HIIDGFGNYNLEIGGVK S FENKS LNLYFLDSGDYSTVP++PGYGWI
Sbjct: 121 NTLSQVNPAESHIIDGFGNYNLEIGGVKDSCFENKSALNLYFLDSGDYSTVPAIPGYGWI 180
Query: 214 KPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGIS 273
KPSQQ WF++TSA L+RAYM +P AQK PAPGLVYFHIPLPEFA FD SN TGVRQEGIS
Sbjct: 181 KPSQQLWFQRTSANLRRAYMRQPEAQKGPAPGLVYFHIPLPEFASFDSSNVTGVRQEGIS 240
Query: 274 SASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRA 333
SASVNSGFFTTMV AGDVKAVFTGHDH+NDFCG LTGIQLCY GGFGYHAYGKAGW RRA
Sbjct: 241 SASVNSGFFTTMVEAGDVKAVFTGHDHLNDFCGELTGIQLCYAGGFGYHAYGKAGWSRRA 300
Query: 334 RVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSG 380
RVVVASLEKTEK GWG VKSIKTWKRLDDEHLT +DG VLWSK+ +G
Sbjct: 301 RVVVASLEKTEKGGWGAVKSIKTWKRLDDEHLTAIDGQVLWSKSRAG 347
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548145|ref|XP_002515129.1| Phosphatase DCR2, putative [Ricinus communis] gi|223545609|gb|EEF47113.1| Phosphatase DCR2, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 297/381 (77%), Positives = 329/381 (86%), Gaps = 3/381 (0%)
Query: 2 MVHRKKKPALVIVAVLTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTP 61
MV +KKP L + +VL + L + ++L F +NG+FKILQVADMHFA+GKTTP
Sbjct: 1 MVVERKKPCLSLASVLAF---SQLLVIVLGVPKQLHFGKNGQFKILQVADMHFADGKTTP 57
Query: 62 CLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121
CLDV P+Q+ CSDLNTTAFI R+I AEKPDLIVFTGDNIFGFDATDAAKS+NAAFAPAI
Sbjct: 58 CLDVYPTQMPTCSDLNTTAFIKRVIRAEKPDLIVFTGDNIFGFDATDAAKSMNAAFAPAI 117
Query: 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVK 181
ASNIPWVAVLGNHDQESTLSREGVMKHIV LKNTLS+VNP +AH+IDGFGNYNLEIGGVK
Sbjct: 118 ASNIPWVAVLGNHDQESTLSREGVMKHIVDLKNTLSRVNPVEAHVIDGFGNYNLEIGGVK 177
Query: 182 GSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKA 241
GS FENKSVLNLYFLDSGDYSTVPS+PGYGWIKPSQ+FWF++TS RL+RAYMSKP AQK
Sbjct: 178 GSRFENKSVLNLYFLDSGDYSTVPSIPGYGWIKPSQEFWFQRTSQRLRRAYMSKPEAQKG 237
Query: 242 PAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHV 301
PAPGLVYFHIPLPEFA FD SNFTGV+QE ISS SVNSGFFT MV GDVKAVFTGHDH+
Sbjct: 238 PAPGLVYFHIPLPEFASFDSSNFTGVKQERISSPSVNSGFFTAMVETGDVKAVFTGHDHL 297
Query: 302 NDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361
NDFCG+L GIQLCYGGGFGYHAYGKAGW RRARVV+ASLEK+++ WG VKSIKTWKRLD
Sbjct: 298 NDFCGQLNGIQLCYGGGFGYHAYGKAGWSRRARVVIASLEKSQQGEWGAVKSIKTWKRLD 357
Query: 362 DEHLTGVDGHVLWSKTSSGNL 382
D + T +DG LWSK +G
Sbjct: 358 DHNFTAIDGLALWSKGPAGKF 378
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248738|ref|NP_001239932.1| uncharacterized protein LOC100794167 [Glycine max] gi|255636949|gb|ACU18807.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/383 (73%), Positives = 320/383 (83%), Gaps = 12/383 (3%)
Query: 11 LVIVAVLTLLCIAPTLAVNAKQ--------ERKLRFRQNGEFKILQVADMHFANGKTTPC 62
+V+V ++ C+ KQ + LRF QNGEFKILQVADMH+ANGKTTPC
Sbjct: 20 MVLVLSVSWFCLTSICVSATKQAYPPTPQPNQNLRFDQNGEFKILQVADMHYANGKTTPC 79
Query: 63 LDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122
LDVLPSQ CSDLNTT F+NRMI AEKP+LIVFTGDNIFGFD++D+AKSL+AAFAPAIA
Sbjct: 80 LDVLPSQNFSCSDLNTTVFLNRMIKAEKPNLIVFTGDNIFGFDSSDSAKSLDAAFAPAIA 139
Query: 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKG 182
SNIPWVAVLGNHDQE TLSR GVM HIV +KNTLS+ NP + HIIDGFGNYNL++GGV+G
Sbjct: 140 SNIPWVAVLGNHDQEGTLSRAGVMNHIVGMKNTLSKFNPPEVHIIDGFGNYNLDVGGVQG 199
Query: 183 SGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAP 242
+ FENKSVLNLYFLDSGDYS V ++ GY WIKPSQQ WF++TSA+L++AY+SKP QK
Sbjct: 200 TDFENKSVLNLYFLDSGDYSQVSTIFGYDWIKPSQQLWFQRTSAKLKKAYISKPVPQKDA 259
Query: 243 APGLVYFHIPLPEFAYFDQSNFTGVRQE----GISSASVNSGFFTTMVAAGDVKAVFTGH 298
APGL YFHIPLPE+A FD SN TGV+QE GISS SVNSGFFTT++AAGDVKAVFTGH
Sbjct: 260 APGLAYFHIPLPEYASFDSSNMTGVKQEPDGNGISSPSVNSGFFTTLLAAGDVKAVFTGH 319
Query: 299 DHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWK 358
DH+NDFCG L IQLCYGGGFGYHAYGKAGW RRARVVVASLEKT K WGDVKSIKTWK
Sbjct: 320 DHINDFCGNLMNIQLCYGGGFGYHAYGKAGWPRRARVVVASLEKTGKGSWGDVKSIKTWK 379
Query: 359 RLDDEHLTGVDGHVLWSKTSSGN 381
RLDD+HLTG+DG VLWSK++ GN
Sbjct: 380 RLDDQHLTGIDGEVLWSKSTGGN 402
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089042|emb|CBI38745.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 276/362 (76%), Positives = 315/362 (87%)
Query: 22 IAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAF 81
+A A +K++ +LRF + G+FKILQVADMHF +GK+TPCL+VLP+Q+ GCSDLNT+AF
Sbjct: 13 LADAAAAVSKEQNQLRFSKEGQFKILQVADMHFGDGKSTPCLNVLPNQMRGCSDLNTSAF 72
Query: 82 INRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS 141
I+RMI AEKP LIVFTGDNIFGFDA DA SLNAAFAPA++SNIPW AVLGNHDQESTLS
Sbjct: 73 IHRMIQAEKPHLIVFTGDNIFGFDAKDAVASLNAAFAPALSSNIPWAAVLGNHDQESTLS 132
Query: 142 REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201
REGVMK+IV +K++LSQ+NP +IIDGFGNYNLE+ GV+GS NKSVLNLYFLDSGDY
Sbjct: 133 REGVMKYIVGMKHSLSQLNPPGVNIIDGFGNYNLEVSGVEGSSLHNKSVLNLYFLDSGDY 192
Query: 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQ 261
STVPS+ GYGWIKPSQQFWF++TS +L+RAYMS P QK+ APGL YFHIPLPE A FD
Sbjct: 193 STVPSIFGYGWIKPSQQFWFQRTSKKLRRAYMSNPEGQKSAAPGLAYFHIPLPESASFDS 252
Query: 262 SNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY 321
SNFTGV+QEGISSASVNSGFFTTMV AGDVKA FTGHDHVNDFCG L GI LCY GGFGY
Sbjct: 253 SNFTGVKQEGISSASVNSGFFTTMVEAGDVKAAFTGHDHVNDFCGELLGIHLCYAGGFGY 312
Query: 322 HAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSGN 381
HAYGKAGW RRARVV+A+LE+ EK GWG+VKSIKTWKRLDD+HLT +D VLWSKTS+G+
Sbjct: 313 HAYGKAGWARRARVVLATLEEREKGGWGEVKSIKTWKRLDDKHLTVIDAQVLWSKTSAGS 372
Query: 382 LR 383
R
Sbjct: 373 RR 374
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453688|ref|XP_002269022.1| PREDICTED: probable inactive purple acid phosphatase 29-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 282/384 (73%), Positives = 323/384 (84%), Gaps = 6/384 (1%)
Query: 6 KKKPALVIVAVLTLL------CIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKT 59
KKK + A+L L +A A +K++ +LRF + G+FKILQVADMHF +GK+
Sbjct: 322 KKKTCYWMKAMLLALWFSGIHVLADAAAAVSKEQNQLRFSKEGQFKILQVADMHFGDGKS 381
Query: 60 TPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAP 119
TPCL+VLP+Q+ GCSDLNT+AFI+RMI AEKP LIVFTGDNIFGFDA DA SLNAAFAP
Sbjct: 382 TPCLNVLPNQMRGCSDLNTSAFIHRMIQAEKPHLIVFTGDNIFGFDAKDAVASLNAAFAP 441
Query: 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGG 179
A++SNIPW AVLGNHDQESTLSREGVMK+IV +K++LSQ+NP +IIDGFGNYNLE+ G
Sbjct: 442 ALSSNIPWAAVLGNHDQESTLSREGVMKYIVGMKHSLSQLNPPGVNIIDGFGNYNLEVSG 501
Query: 180 VKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQ 239
V+GS NKSVLNLYFLDSGDYSTVPS+ GYGWIKPSQQFWF++TS +L+RAYMS P Q
Sbjct: 502 VEGSSLHNKSVLNLYFLDSGDYSTVPSIFGYGWIKPSQQFWFQRTSKKLRRAYMSNPEGQ 561
Query: 240 KAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHD 299
K+ APGL YFHIPLPE A FD SNFTGV+QEGISSASVNSGFFTTMV AGDVKA FTGHD
Sbjct: 562 KSAAPGLAYFHIPLPESASFDSSNFTGVKQEGISSASVNSGFFTTMVEAGDVKAAFTGHD 621
Query: 300 HVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKR 359
HVNDFCG L GI LCY GGFGYHAYGKAGW RRARVV+A+LE+ EK GWG+VKSIKTWKR
Sbjct: 622 HVNDFCGELLGIHLCYAGGFGYHAYGKAGWARRARVVLATLEEREKGGWGEVKSIKTWKR 681
Query: 360 LDDEHLTGVDGHVLWSKTSSGNLR 383
LDD+HLT +D VLWSKTS+G+ R
Sbjct: 682 LDDKHLTVIDAQVLWSKTSAGSRR 705
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573279|ref|XP_003554790.1| PREDICTED: probable inactive purple acid phosphatase 29-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 277/364 (76%), Positives = 317/364 (87%), Gaps = 2/364 (0%)
Query: 20 LCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTT 79
C+ P ++Q+ +LRF +NGEFKILQ+AD+HFANGKTT CLDVLPSQ A CSDLNTT
Sbjct: 17 FCLIPFCF--SQQKLRLRFGKNGEFKILQIADLHFANGKTTHCLDVLPSQYASCSDLNTT 74
Query: 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQEST 139
AFI R+I +EKP+LIVFTGDNIFG+DA+D AKS++AAFAPAIASNIPWVAVLGNHDQE +
Sbjct: 75 AFIQRIILSEKPNLIVFTGDNIFGYDASDPAKSMDAAFAPAIASNIPWVAVLGNHDQEGS 134
Query: 140 LSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199
LSREGV+K+I +KNTLS VNP + HIIDGFGNYNLE+GGV+G+ FENKSVLNLYFLDSG
Sbjct: 135 LSREGVIKYIAGMKNTLSIVNPPEVHIIDGFGNYNLEVGGVEGTDFENKSVLNLYFLDSG 194
Query: 200 DYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYF 259
DYS VP +PGYGWIKPSQQ WF++TS +L+ AYM+ P +QK PAPGL YFHIPLPE+A F
Sbjct: 195 DYSKVPFIPGYGWIKPSQQLWFQRTSQKLREAYMNGPVSQKEPAPGLAYFHIPLPEYASF 254
Query: 260 DQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGF 319
D SNFTGV+QEGISSASVNSGFFTT+V AGDVKAVFTGHDHVNDFCG+LTGI LCY GGF
Sbjct: 255 DSSNFTGVKQEGISSASVNSGFFTTLVEAGDVKAVFTGHDHVNDFCGKLTGIHLCYAGGF 314
Query: 320 GYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379
GYHAYGKAGW RRARVV+ SLEKT+ W DVKSIKTWKRLDD++LTG+DG VLWSK+
Sbjct: 315 GYHAYGKAGWSRRARVVLVSLEKTDNGRWEDVKSIKTWKRLDDQNLTGIDGQVLWSKSFG 374
Query: 380 GNLR 383
N R
Sbjct: 375 SNRR 378
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445527|ref|XP_004140524.1| PREDICTED: probable inactive purple acid phosphatase 29-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/371 (76%), Positives = 311/371 (83%), Gaps = 2/371 (0%)
Query: 12 VIVAVLTLLCIAPT--LAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQ 69
+ + +L L PT AV Q +LRF +NGEFKILQVADMH+ANGK+TPC DVLP Q
Sbjct: 9 LFLILLFSLTFPPTKSTAVQRNQPMRLRFGKNGEFKILQVADMHYANGKSTPCEDVLPDQ 68
Query: 70 VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVA 129
++ CSDLNTTAF+ RMI AEKPD IVFTGDNIFG+DATDAAKSL+AAFAPAIASNIPW A
Sbjct: 69 ISSCSDLNTTAFLRRMILAEKPDFIVFTGDNIFGYDATDAAKSLDAAFAPAIASNIPWAA 128
Query: 130 VLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKS 189
VLGNHDQESTLSREGVMKHIV LK+TLS+VNPS I+GFGNYNLE+ GVKGS FENKS
Sbjct: 129 VLGNHDQESTLSREGVMKHIVGLKSTLSKVNPSGMKTINGFGNYNLEVSGVKGSDFENKS 188
Query: 190 VLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYF 249
VLNLYFLDSGDYSTVP + GY WIKPSQQFWF+ TSA+L+RAYM KP QK APGL +F
Sbjct: 189 VLNLYFLDSGDYSTVPRIVGYSWIKPSQQFWFQLTSAKLKRAYMDKPFPQKTAAPGLTFF 248
Query: 250 HIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLT 309
HIPLPEF+ FD SN+TGVRQE ISS VNSGFFT MV AGDVKAVFTGHDH+NDFCG T
Sbjct: 249 HIPLPEFSNFDASNYTGVRQEEISSPPVNSGFFTAMVEAGDVKAVFTGHDHLNDFCGLFT 308
Query: 310 GIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVD 369
GI LCYGGGFGYHAYGKAGW RRARVVVA+LE+T K WG VKSI+TWKRLDD+HLT +D
Sbjct: 309 GINLCYGGGFGYHAYGKAGWSRRARVVVANLERTAKGNWGSVKSIRTWKRLDDKHLTRID 368
Query: 370 GHVLWSKTSSG 380
VLWSK S G
Sbjct: 369 SQVLWSKNSLG 379
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7208777|emb|CAB76911.1| putative PTS protein [Cicer arietinum] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/374 (74%), Positives = 323/374 (86%), Gaps = 3/374 (0%)
Query: 11 LVIVAVLTLLCIAPTLAVNAKQE-RKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQ 69
+V+V+ L+ + ++ +QE +KLRF QNGEFKILQVADMH+A+GK T CLDVLPSQ
Sbjct: 23 MVMVSWFWLIPATSSSSLPQQQENQKLRFDQNGEFKILQVADMHYADGKNTLCLDVLPSQ 82
Query: 70 VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVA 129
A C+DLNTTAFI R I AEKP+LIVFTGDNIFGFD++D+AKS++AAFAPAIASNIPWVA
Sbjct: 83 NASCTDLNTTAFIQRTILAEKPNLIVFTGDNIFGFDSSDSAKSMDAAFAPAIASNIPWVA 142
Query: 130 VLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKS 189
VLGNHDQE +LSREGVMK+IV +KNTLS++NP + HIIDGFGNYNLE+GGV+G+ FENKS
Sbjct: 143 VLGNHDQEGSLSREGVMKYIVGMKNTLSKLNPPEVHIIDGFGNYNLEVGGVQGTVFENKS 202
Query: 190 VLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYF 249
VLNLYFLDSGDYS VP++ GY WIKPSQQ WFE+ SA+L++AY+ P QK APGL YF
Sbjct: 203 VLNLYFLDSGDYSKVPAIFGYDWIKPSQQLWFERMSAKLRKAYIKGPVPQKEAAPGLAYF 262
Query: 250 HIPLPEFAYFDQSNFTGVRQE--GISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR 307
HIPLPE+A FD SNFTGV+ E GISSASVNSGFFTT+V AGDVKAVFTGHDH+NDFCG+
Sbjct: 263 HIPLPEYASFDSSNFTGVKMEPDGISSASVNSGFFTTLVEAGDVKAVFTGHDHLNDFCGK 322
Query: 308 LTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTG 367
L IQLCY GGFGYHAYGKAGW RRARVVVASLEKT+K WGDVKSIK+WKRLDD+HLTG
Sbjct: 323 LMDIQLCYAGGFGYHAYGKAGWSRRARVVVASLEKTDKGSWGDVKSIKSWKRLDDQHLTG 382
Query: 368 VDGHVLWSKTSSGN 381
+DG VLWSK+ GN
Sbjct: 383 IDGEVLWSKSFRGN 396
|
Source: Cicer arietinum Species: Cicer arietinum Genus: Cicer Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449520215|ref|XP_004167129.1| PREDICTED: probable inactive purple acid phosphatase 29-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/374 (75%), Positives = 313/374 (83%), Gaps = 3/374 (0%)
Query: 12 VIVAVLTLLCIAPT--LAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQ 69
+ + +L L PT AV Q +LRF +NGEFKILQVADMH+ANGK+TPC DVLP Q
Sbjct: 9 LFLILLFSLTFPPTKSTAVQRNQPMRLRFGKNGEFKILQVADMHYANGKSTPCEDVLPDQ 68
Query: 70 VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVA 129
++ CSDLNTTAF+ RMI AEKPD IVFTGDNIFG+DATDAAKSL+AAFAPAIASNIPW A
Sbjct: 69 ISSCSDLNTTAFLRRMILAEKPDFIVFTGDNIFGYDATDAAKSLDAAFAPAIASNIPWAA 128
Query: 130 VLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKS 189
VLGNHDQESTLSREGVMKHIV LK+TLS+VNPS I+GFGNYNLE+ GVKGS FENKS
Sbjct: 129 VLGNHDQESTLSREGVMKHIVGLKSTLSKVNPSGMKTINGFGNYNLEVSGVKGSDFENKS 188
Query: 190 VLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYF 249
VLNLYFLDSGDYSTVP + GYGWIKPSQQFWF+ TSA L+RAY KP QK APGL +F
Sbjct: 189 VLNLYFLDSGDYSTVPGIYGYGWIKPSQQFWFQLTSAMLKRAYTGKPFPQKTAAPGLTFF 248
Query: 250 HIPLPEFAYFDQSNFTGVRQE-GISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRL 308
HIPLPE++ FD SN+TGV Q+ GISS SVNSGFFT MV AGDVKAVFTGHDH+NDFCG L
Sbjct: 249 HIPLPEYSSFDASNYTGVLQDVGISSPSVNSGFFTAMVEAGDVKAVFTGHDHLNDFCGLL 308
Query: 309 TGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGV 368
TGI LCYGGGFGYHAYGKAGW RRARVVVA+LE+T K WG VKSI+TWKRLDD+HLT +
Sbjct: 309 TGINLCYGGGFGYHAYGKAGWSRRARVVVANLERTAKGNWGSVKSIRTWKRLDDKHLTRI 368
Query: 369 DGHVLWSKTSSGNL 382
D VLWSK S G L
Sbjct: 369 DSQVLWSKNSLGKL 382
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 402 | ||||||
| TAIR|locus:2161937 | 389 | PAP29 "AT5G63140" [Arabidopsis | 0.898 | 0.928 | 0.709 | 1.7e-139 | |
| TAIR|locus:2041379 | 401 | PAP14 "AT2G46880" [Arabidopsis | 0.912 | 0.915 | 0.557 | 1.3e-107 | |
| TAIR|locus:2175594 | 397 | PAP28 "AT5G57140" [Arabidopsis | 0.833 | 0.843 | 0.516 | 2.2e-89 | |
| CGD|CAL0002750 | 728 | orf19.843 [Candida albicans (t | 0.815 | 0.450 | 0.377 | 3.1e-51 | |
| ASPGD|ASPL0000009456 | 548 | AN10446 [Emericella nidulans ( | 0.706 | 0.518 | 0.366 | 7.3e-43 | |
| SGD|S000004353 | 578 | DCR2 "Phosphoesterase involved | 0.758 | 0.527 | 0.364 | 1.1e-41 | |
| DICTYBASE|DDB_G0278297 | 400 | DDB_G0278297 "metallophosphoes | 0.706 | 0.71 | 0.319 | 1.8e-32 | |
| DICTYBASE|DDB_G0283451 | 404 | DDB_G0283451 "Phosphatase DCR2 | 0.629 | 0.626 | 0.367 | 2.3e-32 | |
| ASPGD|ASPL0000011457 | 391 | AN3982 [Emericella nidulans (t | 0.723 | 0.744 | 0.301 | 1.2e-22 | |
| POMBASE|SPCC1020.05 | 509 | SPCC1020.05 "phosphoprotein ph | 0.412 | 0.326 | 0.356 | 3.4e-17 |
| TAIR|locus:2161937 PAP29 "AT5G63140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1365 (485.6 bits), Expect = 1.7e-139, P = 1.7e-139
Identities = 259/365 (70%), Positives = 292/365 (80%)
Query: 17 LTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDL 76
L LC++P A Q RKLRF NGEFKILQVADMHFANG T C +VLPSQ A CSDL
Sbjct: 22 LACLCLSPIPAT--AQRRKLRFSVNGEFKILQVADMHFANGAKTQCQNVLPSQRAHCSDL 79
Query: 77 NTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136
NTT F++R+I+AEKPDLIVFTGDNIFGFD DA KS+NAAFAPAIAS IPWVA+LGNHDQ
Sbjct: 80 NTTIFMSRVIAAEKPDLIVFTGDNIFGFDVKDALKSINAAFAPAIASKIPWVAILGNHDQ 139
Query: 137 ESTLSREGVMKHIVTLKNTLSQVNPSDA-HIIDGFGNYNLEIGGVKGSGFENKSVLNLYF 195
EST +R+ VM HIV L NTLSQVNP +A H IDGFGNYNL+I G S +NKSVLNLYF
Sbjct: 140 ESTFTRQQVMNHIVKLPNTLSQVNPPEAAHYIDGFGNYNLQIHGAADSKLQNKSVLNLYF 199
Query: 196 LDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPE 255
LDSGDYS+VP + GY WIK SQQFWF++TS RL+R Y +KP Q+ APGL YFHIPLPE
Sbjct: 200 LDSGDYSSVPYMEGYDWIKTSQQFWFDRTSKRLKREYNAKPNPQEGIAPGLAYFHIPLPE 259
Query: 256 FAYFDQSNFT-GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
F FD N T GVRQEG S+AS NSGFFTT++A GDVK+VF GHDHVNDFCG L G+ LC
Sbjct: 260 FLSFDSKNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLC 319
Query: 315 YGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLW 374
YGGGFGYHAYGKAGWERRARVVV L K K WG VKSIKTWKRLDD+HL+ +D VLW
Sbjct: 320 YGGGFGYHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLW 379
Query: 375 SKTSS 379
+ +++
Sbjct: 380 NNSAN 384
|
|
| TAIR|locus:2041379 PAP14 "AT2G46880" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 209/375 (55%), Positives = 264/375 (70%)
Query: 12 VIVAVLTLLCIAPTLAVNAKQ--ERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQ 69
V+ L LC++ T V+A R+LRF +G FKILQV+DMH+ GK T C DV P++
Sbjct: 13 VLSVSLIYLCLS-TCHVSAFDFGRRQLRFNTDGRFKILQVSDMHYGFGKETQCSDVSPAE 71
Query: 70 VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF-DATDAAKSLNAAFAPAIASNIPWV 128
CSDLNTT+F+ R I++EKPDLIVF+GDN++G + +D AKS++ AFAPAI S IPWV
Sbjct: 72 FPYCSDLNTTSFLQRTIASEKPDLIVFSGDNVYGLCETSDVAKSMDMAFAPAIESGIPWV 131
Query: 129 AVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHI--IDGFGNYNLEIGGVKGSGFE 186
A+LGNHDQES ++RE +MK+I+ L N+LSQVNP DA + IDGFGNYNL+I G GS
Sbjct: 132 AILGNHDQESDMTRETMMKYIMKLPNSLSQVNPPDAWLYQIDGFGNYNLQIEGPFGSPLF 191
Query: 187 NKSVLNLYFLDSGDYSTVPSVP-GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPG 245
KS+LNLY LD G Y+ + Y W+K SQQ W+E TS L+ + P Q + APG
Sbjct: 192 FKSILNLYLLDGGSYTKLDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPG 251
Query: 246 LVYFHIPLPEFAYFDQSN-FTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDF 304
LVY HIP+PEFA F++S TGVRQE S +NSGFFT +V G+VK VF+GHDHVNDF
Sbjct: 252 LVYLHIPMPEFALFNKSTEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDF 311
Query: 305 CGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEH 364
C L GI LCY GG GYH YG+ GW RR RVV A LEKT WG V +IKTWKRLDD++
Sbjct: 312 CAELHGINLCYAGGAGYHGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKN 371
Query: 365 LTGVDGHVLWSKTSS 379
+ +D +LW+K ++
Sbjct: 372 HSLIDTQLLWTKNTT 386
|
|
| TAIR|locus:2175594 PAP28 "AT5G57140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 183/354 (51%), Positives = 223/354 (62%)
Query: 36 LRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIV 95
LRFR +G FKILQVADMHF G T C DVL S+ CSDLNTT F+ RMI +E+PDLI
Sbjct: 50 LRFRDDGTFKILQVADMHFGMGMITRCRDVLDSEFEYCSDLNTTRFLRRMIESERPDLIA 109
Query: 96 FTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNT 155
FTGDNIFG TDAA+SL A PAI IPW AVLGNHD ESTL+R +M + + +
Sbjct: 110 FTGDNIFGSSTTDAAESLLEAIGPAIEYGIPWAAVLGNHDHESTLNRLELMTFLSLMDFS 169
Query: 156 LSQVNP-------SDA-HIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSV 207
+SQ+NP D +IDGFGNY + + G GS N +V +L+F DSGD V
Sbjct: 170 VSQINPLVEDETKGDTMRLIDGFGNYRVRVYGAPGSVLANSTVFDLFFFDSGDREIVQGK 229
Query: 208 PGYGWIKPSQQFWFEQTSAR--LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFT 265
YGWIK SQ W + TS + QR +++ PA L +FHIP+ E + F
Sbjct: 230 RTYGWIKESQLRWLQDTSIQGHSQRIHVNPPA--------LAFFHIPILEVRELWYTPFI 281
Query: 266 GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG 325
G QEG++ + V SG T V+ G+VKA F GHDHVNDFCG L G+ CYGGGFGYHAYG
Sbjct: 282 GQFQEGVACSIVQSGVLQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYG 341
Query: 326 KAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379
+ W RRARV+ A L K W +K IKTWKRLDDE+L+ +D VLW + S
Sbjct: 342 RPNWHRRARVIEAKLGKGRDT-WEGIKLIKTWKRLDDEYLSKIDEQVLWETSDS 394
|
|
| CGD|CAL0002750 orf19.843 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 137/363 (37%), Positives = 189/363 (52%)
Query: 28 VNAKQERKLRFRQNGE--FKILQVADMHFANGKTTPCLDVLP-SQVAGC-SDLNTTAFIN 83
++ K+E N E FKILQ+AD+HF+ G CLD P S GC +D T FIN
Sbjct: 379 IDYKKEIGTTLTMNSEDKFKILQIADLHFSTGYGK-CLDPQPPSSAKGCKADSRTLEFIN 437
Query: 84 RMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSRE 143
+++ EKPD++V TGD IFG + D+ S A P + IP+ +GNHD E +L RE
Sbjct: 438 KVLDLEKPDMVVLTGDQIFGDASPDSESSAFKALNPFVERKIPFAITVGNHDDEGSLKRE 497
Query: 144 GVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYST 203
+M + +++ + P+ IDGFGNY + + G K S + L+LYF+DS YS
Sbjct: 498 EIMGLYADMPYSVAAMGPAS---IDGFGNYVVTVQG-KSS---KATALSLYFVDSHAYSK 550
Query: 204 VPSV-PGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQS 262
P V PGY WIK +Q + +Q + +Q + + K P + +FHIPLPEF +Q
Sbjct: 551 TPKVTPGYDWIKENQLIYLKQEAESIQNSVEKYRKSNKIPL-AMAFFHIPLPEFRNLNQP 609
Query: 263 NFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLT------G---IQL 313
F G +EG+++ NSG + G V GHDH ND+C + T G + L
Sbjct: 610 -FIGENREGVTAPRYNSGARQVLSEIG-VSVASVGHDHCNDYCLQDTQQSSSPGDNKMWL 667
Query: 314 CYGGGFGYHAYGKA-GWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHV 372
C+GGG G YG G+ RR RV K E IKTWKR +D +D V
Sbjct: 668 CFGGGAGLGGYGGYNGYIRRMRVYELDTSKGE---------IKTWKRTEDNPGNIIDEQV 718
Query: 373 LWS 375
L S
Sbjct: 719 LVS 721
|
|
| ASPGD|ASPL0000009456 AN10446 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 114/311 (36%), Positives = 157/311 (50%)
Query: 37 RFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVA---GC-SDLNTTAFINRMISAEKPD 92
R +NG FKI+Q+AD+H + G C D +P ++ GC +D T FI R++ E+PD
Sbjct: 211 RINENGRFKIMQLADLHLSTG-LGHCRDPVPPELIPGQGCEADPRTLDFIERLLDEEQPD 269
Query: 93 LIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152
L++ +GD + G + DA L + + IP+ A+ GNHD E L R M + L
Sbjct: 270 LVILSGDQVNGETSRDAQSPLFKSVKLLVDRKIPYAAIFGNHDDEGNLDRHQSMAILEDL 329
Query: 153 KNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVP-SVPGYG 211
+LS P D IDG GNY +E V G G + S L LY LDS YS GY
Sbjct: 330 PYSLSSAGPED---IDGVGNYIVE---VLGRGNTDHSALTLYLLDSHSYSPDERQFRGYD 383
Query: 212 WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSN-FTGVRQE 270
WIKP+Q WF+ T+ L+ + + + HIPLPEFA + N F G E
Sbjct: 384 WIKPNQIRWFKTTAQGLKAKHQQYAYMHM----NMAFIHIPLPEFA--QRGNYFRGNWSE 437
Query: 271 GISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCG------RLTGIQLCYGGGFGYHAY 324
++ NSGF + G + V GHDH ND+C + + +CYGGG G+ Y
Sbjct: 438 PSTAPGFNSGFKDALEEEG-ILFVGCGHDHANDYCALSKNEAQKPSLWMCYGGGAGFGGY 496
Query: 325 GK-AGWERRAR 334
G G+ RR R
Sbjct: 497 GGYGGFIRRVR 507
|
|
| SGD|S000004353 DCR2 "Phosphoesterase involved in downregulation of the UPR" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 125/343 (36%), Positives = 172/343 (50%)
Query: 34 RKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDL 93
++L+ G+FKI+Q+AD+H G++ C+D P A +D T F+ +++ EKP L
Sbjct: 238 QRLQETDEGKFKIVQLADLHLGVGESE-CIDEYPKHEACKADPKTETFVQQVLDIEKPQL 296
Query: 94 IVFTGDNIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152
+VFTGD I G + D+ L A AP IA IPW V GNHD E +L+R + + L
Sbjct: 297 VVFTGDQIMGDRSIQDSETVLLKAVAPVIARKIPWAMVWGNHDDEGSLTRWQLSEIASVL 356
Query: 153 KNTLSQVNPSDAHIID-GFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSV-PGY 210
+L + +P D H G GNY +I + E V LYFLDS YSTV + PGY
Sbjct: 357 PYSLFKFSPHDTHDNTFGVGNYIYQI--FSNNDTE-VPVGTLYFLDSHKYSTVGKIYPGY 413
Query: 211 GWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFD------QSN- 263
WIK SQ + E Y K + +FHIPLPE+ + + N
Sbjct: 414 DWIKESQWKYIED--------YHDVNLKFKTGL-SMAFFHIPLPEYLNIESKTHPGEKNP 464
Query: 264 FTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTG----IQLCYGGGF 319
G+ +EG+++ NS TT+ V V GHDH ND+C R I LCYGGG
Sbjct: 465 LIGMYKEGVTAPKYNSEGITTLDRLS-VDVVSCGHDHCNDYCLRDDSTPNKIWLCYGGGG 523
Query: 320 GYHAY-GKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361
G Y G G ERR R+ ++ + +I TWKRL+
Sbjct: 524 GEGGYAGYGGTERRIRIYEINVNEN---------NIHTWKRLN 557
|
|
| DICTYBASE|DDB_G0278297 DDB_G0278297 "metallophosphoesterase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 103/322 (31%), Positives = 149/322 (46%)
Query: 29 NAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA 88
N + + KLRF +N +FKI+Q D+HF G+ + + D+N+TA +N++I
Sbjct: 58 NNENKNKLRFNKNNKFKIIQFTDLHFGEGEN----EAWGKE----QDINSTAVMNKIIDK 109
Query: 89 E-KPDLIVFTGDNIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVM 146
E DLI+FTGD I G + + +K A A NIPW GNHD S+ + G
Sbjct: 110 EGNVDLILFTGDLITGNNINGNVSKYWENAINVAKTRNIPWAITFGNHDDLSS-NDNGTR 168
Query: 147 KHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN-LYFLDSGDYSTVP 205
+++L L ++ I G NYNL I G EN +L+ L+ DSGD
Sbjct: 169 YDLISLDIKLGSLSKLGPISIPGVSNYNLNI-----YGNENDRILSTLWLFDSGDGENDC 223
Query: 206 SVP-----GYGW-----IKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPE 255
G G+ I Q W+E + + + K P +FHIPL E
Sbjct: 224 KNQRNREFGNGYQCNTFITKEQIQWYENETLKYEN--------DKLPLWEGAFFHIPLQE 275
Query: 256 FAY-FDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
+ ++ G + I+ N G F V G ++ + GH+H NDFC I++C
Sbjct: 276 YMLVWNYGVCFGFNNDSIACQKTNEGLFKKFVEIGRIRMISVGHNHGNDFCSIFDNIKMC 335
Query: 315 YGGGFGYHAYGKAGWERRARVV 336
YG GY YG WER ARV+
Sbjct: 336 YGRHSGYGGYGT--WERGARVI 355
|
|
| DICTYBASE|DDB_G0283451 DDB_G0283451 "Phosphatase DCR2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 107/291 (36%), Positives = 143/291 (49%)
Query: 83 NRMISAEKP-DLIVFTGDNIFGF--DATDA---AKSLNAAFAPAIASNIPWVAVLGNHDQ 136
N +++AE DL+V TGD++ G+ + T+ K ++ P I NI W LGNHD
Sbjct: 74 NGVLTAEPDGDLVVMTGDSVSGYAWNGTEGWFIEKWIHLV-EPMIKHNIRWAFTLGNHDD 132
Query: 137 ESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFL 196
E+ L R +++ T +L+Q PSD I G NY L I SG E ++L YF
Sbjct: 133 EADLDRVQIVELDNTFNLSLTQRGPSD---IRGATNYYLPITD-PSSG-EVATIL--YFF 185
Query: 197 DSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF 256
DSGD V G+G + P Q W+ S L+ Y + PA + + HIP+PE
Sbjct: 186 DSGD-DNCQGVEGWGCVYPDQIEWYRTVSMGLREKY-----GRVVPA--IAFMHIPIPE- 236
Query: 257 AYFDQSNFTGVR----QEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQ 312
Y D NF V G+ SVN+G F GD+ ++ GHDH NDF G G+Q
Sbjct: 237 -YMDMWNFYPVNGSLYDTGVCCFSVNTGLFAAFKEMGDIISMHCGHDHDNDFIGEYNGVQ 295
Query: 313 LCYGGGFGYHAYGK-AGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDD 362
L YG GY YG GW+ ARV LE T + SI T+ R DD
Sbjct: 296 LGYGRKSGYGGYGPPTGWKHGARV----LEIT-----ANPFSISTYLRFDD 337
|
|
| ASPGD|ASPL0000011457 AN3982 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 274 (101.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 108/358 (30%), Positives = 156/358 (43%)
Query: 36 LRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLI 94
LRF + G F+I +D+HFA + T +Q A D T + +++ E L+
Sbjct: 6 LRFSKEGTFQITVFSDLHFAEYENT-------AQGAK-QDSRTAGVVRKVLQHEASTQLV 57
Query: 95 VFTGDNIFGFDAT--DAAKSLNAAFAPAIASNIPWVAVLGNHDQES-TLSREGVMKHIVT 151
V GD I G+ T +A + L+ AP A +PW GNHD E SRE + T
Sbjct: 58 VLNGDLISGYGTTSDNATRYLDQVLAPIQALGLPWAVTYGNHDNERFARSRELLDYESRT 117
Query: 152 LKN-TLSQ-VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPG 209
N +L++ + P D G NY LE+ + S + L+F DS P
Sbjct: 118 YPNYSLTRNMGPRDLEA--GVSNYYLEVFAAETSHVPE---MLLWFFDSRG-GAQP---- 167
Query: 210 YGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGV-- 267
+ W+ S WF T+A L Y KA P + +FHIP+ A +D + GV
Sbjct: 168 HDWVHDSVVQWFIDTNANLTNKY------NKA-VPSIAFFHIPIT--ATYDFQLYPGVDT 218
Query: 268 -RQEGISSASV---------NSG----FFTTMVAAGDVKAVFTGHDHVNDFCGRL----- 308
R+ GI+ V +G F + A + A F+GHDH ND+C +
Sbjct: 219 SREPGINGEKVWWQGRGYDGKTGHDLKFMAALSATEGMLATFSGHDHDNDWCFKWKSPSA 278
Query: 309 ----TGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDD 362
G+ +CYG GY YG G R AR ++ + T K + TW RL+D
Sbjct: 279 TSSSAGLNVCYGRHTGYGGYG--GLARGARQILLK-QSTIK------DEVATWIRLED 327
|
|
| POMBASE|SPCC1020.05 SPCC1020.05 "phosphoprotein phosphatase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 236 (88.1 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 66/185 (35%), Positives = 91/185 (49%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVA-GC-SDLNTTAFINRMISAEKPDLIVFTGDNIF 102
KILQ++D+H++N PC D P + A C +D TTAF+N ++ E+PD ++ TGD I
Sbjct: 209 KILQLSDLHYSNSDR-PCRDPYPYETAEDCMADAKTTAFVNELLQLEEPDFVLLTGDLIN 267
Query: 103 GFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162
G + DA SL A +P + N+P+ GNHD LSRE + K LSQ+ P
Sbjct: 268 GDTSRDARSSLMKAVSPFVDYNVPFAVNFGNHDDLGDLSREELAK-------ILSQI-PG 319
Query: 163 DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS-GDYSTVPSVPGYGWIKPSQQFWF 221
+I GN + GV + +Y LD+ GD S PGY I Q W
Sbjct: 320 SMGLI---GN----VSGVGNFVLHSPRKFAIYVLDTKGDTSNRRLCPGYDAITEDQLEWL 372
Query: 222 EQTSA 226
A
Sbjct: 373 SSKVA 377
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9FMK9 | PPA29_ARATH | No assigned EC number | 0.7095 | 0.8980 | 0.9280 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 402 | |||
| cd07383 | 199 | cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 p | 1e-45 | |
| cd07383 | 199 | cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 p | 3e-33 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-10 | |
| cd07385 | 223 | cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and re | 3e-07 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 1e-06 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-06 | |
| TIGR00619 | 253 | TIGR00619, sbcd, exonuclease SbcD | 1e-05 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 2e-04 | |
| COG1408 | 284 | COG1408, COG1408, Predicted phosphohydrolases [Gen | 4e-04 | |
| cd00840 | 223 | cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal m | 8e-04 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 0.002 | |
| PRK11340 | 271 | PRK11340, PRK11340, phosphodiesterase YaeI; Provis | 0.004 | |
| COG0420 | 390 | COG0420, SbcD, DNA repair exonuclease [DNA replica | 0.004 |
| >gnl|CDD|163626 cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 1e-45
Identities = 57/119 (47%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 209 GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF--AYFDQSNFTG 266
GY WI+PSQ WF++TSA L++ Y P P L +FHIPLPE+ + + G
Sbjct: 88 GYDWIRPSQIEWFKETSAALKKKY-------GKPIPSLAFFHIPLPEYREVWEGKGKVPG 140
Query: 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG 325
+ E + +NSG F ++ GDVK VF GHDH NDFCGR GI LCYG G GY YG
Sbjct: 141 INNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWLCYGRGTGYGGYG 199
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 199 |
| >gnl|CDD|163626 cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 3e-33
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNI 101
G+FKILQ AD+HF G+ T +DL T AFI R++ AEKPDL+V TGD I
Sbjct: 1 GKFKILQFADLHFGEGEGTC--------EGCEADLKTVAFIERVLDAEKPDLVVLTGDLI 52
Query: 102 FGFDATD-AAKSLNAAFAPAIASNIPWVAVLGNHD 135
G + D + +L+ A +P I IPW A GNHD
Sbjct: 53 TGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 199 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 59.0 bits (142), Expect = 2e-10
Identities = 40/257 (15%), Positives = 65/257 (25%), Gaps = 73/257 (28%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF 104
+IL + D+H G DL+ + ++ KPDL++F GD +
Sbjct: 1 RILVIGDLHG-----------------GLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRG 43
Query: 105 DATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDA 164
+ +L FA + + P V GNHD
Sbjct: 44 PPSLEVLAL--LFALKLKAPGPVYLVRGNHD---------------------------FD 74
Query: 165 HIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQT 224
G Y G G + S + + G G ++F
Sbjct: 75 SGNSELGFYLECAGLPYVLGNGDVSNGTVEIIGLSSLY------GKGGGLVWEEFLEL-- 126
Query: 225 SARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTT 284
+ ++ H PL +
Sbjct: 127 --------LDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLF-----------GEEALED 167
Query: 285 MVAAGDVKAVFTGHDHV 301
++ V V GH HV
Sbjct: 168 LLKDNGVDLVLRGHTHV 184
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163628 cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 25/99 (25%)
Query: 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS---AEKPDLIVFTGD 99
+I ++D+H + + R++ A KPDL+V TGD
Sbjct: 1 GLRIAHLSDLHL-------------------GPFVSRERLERLVEKINALKPDLVVLTGD 41
Query: 100 NIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138
+ G + D + L + + + AVLGNHD S
Sbjct: 42 LVDG--SVDVLELL-LELLKKLKAPLGVYAVLGNHDYYS 77
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 223 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 1e-06
Identities = 63/277 (22%), Positives = 96/277 (34%), Gaps = 81/277 (29%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGD--NIF 102
+ Q++D+H L V + S A IN + +PDL++ TGD +
Sbjct: 1 LLAQISDLHLRADGEGALLGVDTAA----SLEAVLAHINAL--HPRPDLVLVTGDLTD-- 52
Query: 103 GFDATDAAKSLNAAFAPAIA-SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP 161
D + + +A IP + GNHD ++ ++ P
Sbjct: 53 --DGSPESY---ERLRELLAALPIPVYLLPGNHD------------DRAAMRAVFPELPP 95
Query: 162 SDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPG--YGWIKPSQQF 219
+ GF Y +++GG L LDS SVPG G + +Q
Sbjct: 96 A-----PGFVQYVVDLGG-----------WRLILLDS-------SVPGQHGGELCAAQLD 132
Query: 220 WFEQTSARLQRAYMSKPAAQKAPAPGLVYFH---IPLPEFAYFDQSNFTGVRQEGISSAS 276
W E A L A P LV+ H P+ A+ D G+R + A
Sbjct: 133 WLE---AALAEA---------PDKPTLVFLHHPPFPVG-IAWMDAI---GLRN---AEA- 172
Query: 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQL 313
+ +V+A+ GH H G GI L
Sbjct: 173 ----LAAVLARHPNVRAILCGHVH-RPIDGSWGGIPL 204
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-06
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 72 GCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVL 131
G + + +AEKPD ++ GD + D D + L AA A + IP V
Sbjct: 8 GNLEALEAVLEAALAAAEKPDFVLVLGDLVG--DGPDPEEVLAAALALLLLLGIPVYVVP 65
Query: 132 GNHD 135
GNHD
Sbjct: 66 GNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|233056 TIGR00619, sbcd, exonuclease SbcD | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF 104
+IL +D H GKT + L Q A DL A AE+ D ++ GD
Sbjct: 2 RILHTSDWHL--GKTLEGVSRLAEQKAFLDDLLEFA------KAEQIDALLVAGDVFDTA 53
Query: 105 DATDAAKSLNAAFAPAI--ASNIPWVAVLGNHDQESTLS 141
+ A+ L AF + A+ IP V + GNHD LS
Sbjct: 54 NPPAEAQELFNAFFRNLSDANPIPIVVISGNHDSAQRLS 92
|
All proteins in this family for which functions are known are double-stranded DNA exonuclease (as part of a complex with SbcC homologs). This complex functions in the initiation of recombination and recombinational repair and is particularly important in regulating the stability of DNA sections that can form secondary structures. This family is likely homologous to the MRE11 family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University) [DNA metabolism, DNA replication, recombination, and repair]. Length = 253 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 62/309 (20%), Positives = 90/309 (29%), Gaps = 72/309 (23%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGD--NI 101
+I ++D+H L V ++ A + I KPDL+V TGD N
Sbjct: 1 MRIAHISDLHLGA------LGVDSEELLE-------ALLAA-IEQLKPDLLVVTGDLTN- 45
Query: 102 FGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP 161
D + P + V GNHD
Sbjct: 46 ---DGEPEEYRRLKELLARLELPAPVIVVPGNHD----------------------ARVV 80
Query: 162 SDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWF 221
+ D F N + G SG V+ L D S G + Q W
Sbjct: 81 NGEAFSDQFFNRYAVLVGACSSG--GWRVIGL------DSSVPGVPLGR--LGAEQLDWL 130
Query: 222 EQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281
E+ A A ++A +V H PLP S TGV + + A
Sbjct: 131 EEALAA---------APERAKDTVVVLHHHPLP-------SPGTGVDRVALRDAGELLDV 174
Query: 282 FTTMVAAGDVKAVFTGHDHV-NDFCGRLTGIQLCYGGGFGYHAYG-KAGWERRARVVVAS 339
+ DV+ V +GH H+ +L G +L A +
Sbjct: 175 L--IAHGNDVRLVLSGHIHLAAQTVYQLNGTRLSDLLVGAGPATCSQVFRGSATAFNTLD 232
Query: 340 LEKTEKRGW 348
L+ R
Sbjct: 233 LDGPGVRVL 241
|
Length = 301 |
| >gnl|CDD|224326 COG1408, COG1408, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 37/178 (20%), Positives = 53/178 (29%), Gaps = 37/178 (20%)
Query: 12 VIVAVLTLLCIAPTLAVNA---KQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPS 68
+ +A L L V + Q KI+Q++D+H L +L +
Sbjct: 12 IALASYAHLLEPGWLRVVKLTILTPKLPASLQG--LKIVQLSDLHSLPF-REEKLALLIA 68
Query: 69 QVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNA----AFAPAIASN 124
I+ E PDLIV TGD + G A +
Sbjct: 69 -----------------IANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLGV--- 108
Query: 125 IPWVAVLGNHDQESTLSREGVM----KHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIG 178
AVLGNHD S + + + V A I+ G G
Sbjct: 109 ---FAVLGNHDYGVDRSNVYIGDLLEELGRVVLRNEIAVIDLLALRIEVGGLDLYLAG 163
|
Length = 284 |
| >gnl|CDD|163616 cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 20/99 (20%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTT-AFINRMIS---AEKPDLIVFTGDN 100
+ L AD H L ++ ++ EK D ++ GD
Sbjct: 1 RFLHTADWH---------LGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDL 51
Query: 101 IFGFD----ATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135
FD + +A + L A + IP + GNHD
Sbjct: 52 ---FDSNNPSPEALELLIEALRRLKEAGIPVFIIAGNHD 87
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 223 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 60/236 (25%), Positives = 85/236 (36%), Gaps = 75/236 (31%)
Query: 82 INRMISAEKPDLIVFTGDNIFGF----DATDAAKSLNAAFAPAIASNIPWVAVLGNHDQE 137
IN++ KP +V GD + L + + +IP V V GNHD
Sbjct: 43 INKL--NPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS-LLDPDIPLVCVCGNHDVG 99
Query: 138 STLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGN--YNLEIGGVKGSGFENKSVLN--L 193
+T + E + D FG+ ++ +GGV VLN L
Sbjct: 100 NTPTEESI------------------KDYRDVFGDDYFSFWVGGVFF------IVLNSQL 135
Query: 194 YFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253
+F D S VP + +Q W E+ +L+ A S +V+ HIP
Sbjct: 136 FF----DPSEVPE------LAQAQDVWLEE---QLEIAKESD------CKHVIVFQHIPW 176
Query: 254 ------PEFAYFDQSNFT-GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVN 302
E +YF N VR+ AG VKAVF+GH H N
Sbjct: 177 FLEDPDEEDSYF---NIPKSVRKP----------LLDKFKKAG-VKAVFSGHYHRN 218
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|236899 PRK11340, PRK11340, phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.004
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFG 103
FKIL +AD+H++ + SD +KPDLI+ GD +
Sbjct: 50 FKILFLADLHYSRFVPLSLI----------SDAIALGI------EQKPDLILLGGDYVL- 92
Query: 104 FDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135
FD + + +P +A P A GNHD
Sbjct: 93 FDMPLNFSAFSDVLSP-LAECAPTFACFGNHD 123
|
Length = 271 |
| >gnl|CDD|223497 COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 77 NTTAFINRMISAEKPDLIVFTGDNIFGFD----ATDAAKSLNAAFAPAIASNIPWVAVLG 132
+ + EK D ++ GD +F D + A K A + IP V + G
Sbjct: 27 KAFDELLEIAKEEKVDFVLIAGD-LF--DTNNPSPRALKLFLEALRRLKDAGIPVVVIAG 83
Query: 133 NHDQESTLSR 142
NHD S LS
Sbjct: 84 NHDSPSRLSE 93
|
Length = 390 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 402 | |||
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 100.0 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.98 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.96 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.95 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.94 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 99.93 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.91 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.9 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.89 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.89 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.88 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 99.85 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.85 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.83 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.83 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.81 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.81 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.81 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.81 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.81 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.74 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.72 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.7 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.7 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.7 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.7 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.68 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.59 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.59 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.59 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 99.56 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 99.55 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.55 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 99.52 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.49 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.48 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.47 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.45 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 99.44 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.41 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.4 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.36 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.34 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.32 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.28 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.27 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.24 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.24 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.23 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 99.22 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 99.2 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.19 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.18 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.16 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 99.15 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 99.13 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 99.06 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.92 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.92 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.91 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.89 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.88 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 98.86 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.84 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.83 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.79 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.76 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 98.72 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.69 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.68 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 98.66 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.65 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.6 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 98.57 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.54 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.52 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.51 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.43 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.4 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 98.36 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.34 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 98.3 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 98.3 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.26 | |
| PHA02239 | 235 | putative protein phosphatase | 98.23 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.18 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 98.17 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 98.11 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 98.06 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 97.99 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.96 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.89 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 97.84 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.76 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.72 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.7 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.69 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.6 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.54 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.52 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.48 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.46 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.41 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 97.39 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.17 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 97.02 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.97 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.87 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 96.78 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 96.72 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 96.56 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.5 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 96.48 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 96.41 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.3 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.16 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 96.08 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 95.89 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 95.8 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 95.63 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 95.46 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 95.37 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 95.36 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 95.3 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 95.06 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 94.69 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 94.62 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 94.59 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 94.55 | |
| COG2949 | 235 | SanA Uncharacterized membrane protein [Function un | 84.92 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 80.78 | |
| KOG3818 | 525 | consensus DNA polymerase epsilon, subunit B [Repli | 80.21 |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-61 Score=429.61 Aligned_cols=334 Identities=59% Similarity=1.014 Sum_probs=297.6
Q ss_pred cCCCcceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhH
Q 015684 30 AKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDA 109 (402)
Q Consensus 30 ~~~~~~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~ 109 (402)
.....+++++.+|+|||+|+||+|++.+...+|+++.|.+..+|.|.+|..+|.++|+.|+|||||+|||+|++....+.
T Consensus 40 ~~~~~~lr~~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da 119 (379)
T KOG1432|consen 40 DNGRLKLRFREDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDA 119 (379)
T ss_pred cCcceeeeecCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhH
Confidence 34455799999999999999999999998889999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCcc--ccccccceEEeccCCCCCCCC
Q 015684 110 AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHI--IDGFGNYNLEIGGVKGSGFEN 187 (402)
Q Consensus 110 ~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~g~~~y~~~~~~~~~~~~~~ 187 (402)
...+.++++|+++.+|||++++||||..+.+++.+++++...+|+++.+++|.+... +.|++||.+.+.+.-++....
T Consensus 120 ~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~ 199 (379)
T KOG1432|consen 120 ATSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELEN 199 (379)
T ss_pred HHHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhcCCCccccCCCcccceeeeecccceEEEeccCCCccccc
Confidence 899999999999999999999999999999999999999999999999998876543 567899999998877777667
Q ss_pred ceeEEEEEEeCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccC-CCcc
Q 015684 188 KSVLNLYFLDSGDYSTVP-SVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQ-SNFT 265 (402)
Q Consensus 188 ~~~~~l~~lDs~~~~~~~-~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~ 265 (402)
.++..+++||++.|+..+ ..++|+|+..+|++||+.+..+.+.. . ......|-+++.|+|++++...+. ....
T Consensus 200 ~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~-~----~~~~P~p~La~~HIP~~E~~~~~~~tp~~ 274 (379)
T KOG1432|consen 200 KSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEP-N----SKYNPQPGLAFFHIPLPEFLELESKTPLI 274 (379)
T ss_pred CceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcc-c----CccCCCCceEEEEcccHHHhhccCCCccc
Confidence 778899999999998886 56789999999999999987542210 0 001223899999999999988876 3467
Q ss_pred cccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCC-eeEEecCCccCCCCCCCCCCcceEEEEEeecccc
Q 015684 266 GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTG-IQLCYGGGFGYHAYGKAGWERRARVVVASLEKTE 344 (402)
Q Consensus 266 G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~g-i~~~~~~~~g~~~y~~~~~~~g~rv~ei~~~~~~ 344 (402)
|..+|+..++..++.++..|.++.+|++|+|||+|.||+|.+.+| +|+||+|+.||++||..+|.|++||+|++..+
T Consensus 275 g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~~~wlCygGgaGyggYg~~gw~Rr~Rv~e~d~~~-- 352 (379)
T KOG1432|consen 275 GVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELKGELWLCYGGGAGYGGYGIGGWERRARVFELDLNK-- 352 (379)
T ss_pred ceeeccccccccccHHHHHHHhccCcceEEeccccccceecccCCeEEEEecCCCccCCcCcCCcccceEEEEccccc--
Confidence 889999999999999999999999999999999999999999999 99999999999999988899999999999653
Q ss_pred ccCCCcccceEEEEEcCCCCCCcccceeeeecC
Q 015684 345 KRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377 (402)
Q Consensus 345 ~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~ 377 (402)
..|+||||++++...++|+|.+|...
T Consensus 353 -------~~IkTWKRl~d~~~~~~D~q~l~d~~ 378 (379)
T KOG1432|consen 353 -------DRIKTWKRLDDKPLSVIDYQLLYDGN 378 (379)
T ss_pred -------cccceeeecCCCCcceeeeEEEeccC
Confidence 67999999999999999999999753
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.6e-31 Score=230.61 Aligned_cols=196 Identities=51% Similarity=0.948 Sum_probs=156.3
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh-HHHHHHHHHhHh
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-AAKSLNAAFAPA 120 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~-~~~~~~~~l~~~ 120 (402)
++|||+|+||+|++...... .....+.++.+.+.++++..+||+||++||++.+..... .++.+.+.++.+
T Consensus 1 ~~~ki~~isDlH~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l 72 (199)
T cd07383 1 GKFKILQFADLHFGEGEGTC--------EGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPM 72 (199)
T ss_pred CceEEEEEeeecccCCCCCC--------CcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHH
Confidence 47999999999998765321 001134567788888888899999999999666554332 577788888877
Q ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCC
Q 015684 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGD 200 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~ 200 (402)
...++|+++++||||.
T Consensus 73 ~~~~~p~~~~~GNHD~---------------------------------------------------------------- 88 (199)
T cd07383 73 IDRKIPWAATFGNHDG---------------------------------------------------------------- 88 (199)
T ss_pred HHcCCCEEEECccCCC----------------------------------------------------------------
Confidence 7779999999999990
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccC--CCcccccCCcCCCCCCC
Q 015684 201 YSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQ--SNFTGVRQEGISSASVN 278 (402)
Q Consensus 201 ~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~G~~~~~~~~~~~~ 278 (402)
+|++.++|++||++.++++... .....+.++|+|||+++..+.|. ....|...+...+...+
T Consensus 89 ---------~g~l~~~ql~wL~~~l~~~~~~-------~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~ 152 (199)
T cd07383 89 ---------YDWIRPSQIEWFKETSAALKKK-------YGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKIN 152 (199)
T ss_pred ---------CCCCCHHHHHHHHHHHHHHhhc-------cCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCC
Confidence 3567888999999999887531 02457999999999988777775 45567776655556677
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCC
Q 015684 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG 325 (402)
Q Consensus 279 ~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~ 325 (402)
+++++.+.+..+|+++||||+|.++++...+++++|+++.+|+++||
T Consensus 153 ~~~~~~~~~~~~v~~v~~GH~H~~~~~~~~~~i~l~~g~~~g~~~y~ 199 (199)
T cd07383 153 SGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWLCYGRGTGYGGYG 199 (199)
T ss_pred cHHHHHHHHcCCeEEEEeCCCCCcceecccCCEEEeCCCCCCCCCCC
Confidence 79999999999999999999999999999999999999999999986
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-28 Score=223.46 Aligned_cols=240 Identities=24% Similarity=0.249 Sum_probs=152.1
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHH---HHHh--cCCCEEEEcCCccCCCChhhHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINR---MISA--EKPDLIVFTGDNIFGFDATDAAKSLNA 115 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~ 115 (402)
+++|||+||||+|+........ .+.++.+.+.+ .+++ .+||+||++|| +++.+..+.++.+.+
T Consensus 12 ~~~~~i~~iSD~Hl~~~~~~~~-----------~~~~~~~~l~~~i~~i~~~~~~~D~vvitGD-l~~~~~~~~~~~~~~ 79 (275)
T PRK11148 12 EARVRILQITDTHLFADEHETL-----------LGVNTWESYQAVLEAIRAQQHEFDLIVATGD-LAQDHSSEAYQHFAE 79 (275)
T ss_pred CCCEEEEEEcCcccCCCCCCce-----------eccCHHHHHHHHHHHHHhhCCCCCEEEECCC-CCCCCCHHHHHHHHH
Confidence 4679999999999854321110 01223333333 3333 37999999999 555555666766666
Q ss_pred HHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEE
Q 015684 116 AFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYF 195 (402)
Q Consensus 116 ~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~ 195 (402)
.++. .++|++++|||||.... +.+.+... ... ..+.+...+ .+++++
T Consensus 80 ~l~~---l~~Pv~~v~GNHD~~~~-----~~~~~~~~-----~~~----------~~~~~~~~~----------~~~~i~ 126 (275)
T PRK11148 80 GIAP---LRKPCVWLPGNHDFQPA-----MYSALQDA-----GIS----------PAKHVLIGE----------HWQILL 126 (275)
T ss_pred HHhh---cCCcEEEeCCCCCChHH-----HHHHHhhc-----CCC----------ccceEEecC----------CEEEEE
Confidence 6654 57999999999998421 22222110 000 011111111 178999
Q ss_pred EeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEec-ChhhhhcccCCCcccccCCcCCC
Q 015684 196 LDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHI-PLPEFAYFDQSNFTGVRQEGISS 274 (402)
Q Consensus 196 lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~-P~~~~~~~~~~~~~G~~~~~~~~ 274 (402)
|||.. .+. ..|+++++|++||+++|++. ++++.+||+|| |++. ...+. .. .
T Consensus 127 Lds~~----~g~-~~G~l~~~ql~wL~~~L~~~------------~~~~~vv~~hH~P~~~-~~~~~------d~----~ 178 (275)
T PRK11148 127 LDSQV----FGV-PHGELSEYQLEWLERKLADA------------PERHTLVLLHHHPLPA-GCAWL------DQ----H 178 (275)
T ss_pred ecCCC----CCC-cCCEeCHHHHHHHHHHHhhC------------CCCCeEEEEcCCCCCC-Ccchh------hc----c
Confidence 99953 222 36889999999999998743 44567787877 5443 22221 11 1
Q ss_pred CCCChHHHHHHHHcC-CeeEEEeccCCCCcccccCCCeeEEecCCccCCC------CCCCCCCcceEEEEEeeccccccC
Q 015684 275 ASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHA------YGKAGWERRARVVVASLEKTEKRG 347 (402)
Q Consensus 275 ~~~~~~~l~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~------y~~~~~~~g~rv~ei~~~~~~~~~ 347 (402)
...|.+.+.++++++ +|+++||||+|. .++...+|+.++.+++++++- +......+|+|+++++.+ |
T Consensus 179 ~l~n~~~l~~ll~~~~~v~~vl~GH~H~-~~~~~~~gi~~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~~----g- 252 (275)
T PRK11148 179 SLRNAHELAEVLAKFPNVKAILCGHIHQ-ELDLDWNGRRLLATPSTCVQFKPHCTNFTLDTVAPGWRELELHAD----G- 252 (275)
T ss_pred CCCCHHHHHHHHhcCCCceEEEecccCh-HHhceECCEEEEEcCCCcCCcCCCCCccccccCCCcEEEEEEcCC----C-
Confidence 124666777777775 899999999999 677788999999999988641 112235689999999632 1
Q ss_pred CCcccceEEEEEcCCC
Q 015684 348 WGDVKSIKTWKRLDDE 363 (402)
Q Consensus 348 ~~~~~~~~tw~r~~~~ 363 (402)
.-.++++|++++
T Consensus 253 ----~~~~~~~~~~~~ 264 (275)
T PRK11148 253 ----SLETEVHRLADT 264 (275)
T ss_pred ----cEEEEEEEcCCC
Confidence 335566788764
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=222.87 Aligned_cols=244 Identities=21% Similarity=0.266 Sum_probs=156.2
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCC-CChhHHHHHHHHHHhc--CCCEEEEcCCccCCCChh----hHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGC-SDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDAT----DAAKSL 113 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~--~pD~vv~~GDli~~~~~~----~~~~~~ 113 (402)
+++++|+++||+|++....... .....+ ...+.++.+.+.+++. +||+||++||++.+.... ..++.+
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~ 76 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLE-----GGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDL 76 (262)
T ss_pred CCCEEEEEecCCccchhhcccc-----CchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHH
Confidence 5789999999999996432100 000001 1223445555666655 999999999955544322 123344
Q ss_pred HHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEE
Q 015684 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNL 193 (402)
Q Consensus 114 ~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l 193 (402)
.+.++.+ ..++|+++++||||.......+.+..+... + +..+|.+...+ +++
T Consensus 77 ~~~~~~~-~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~-------~---------g~~~y~~~~~~-----------~~~ 128 (262)
T cd07395 77 KDVLSLL-DPDIPLVCVCGNHDVGNTPTEESIKDYRDV-------F---------GDDYFSFWVGG-----------VFF 128 (262)
T ss_pred HHHHhhc-cCCCcEEEeCCCCCCCCCCChhHHHHHHHH-------h---------CCcceEEEECC-----------EEE
Confidence 4444432 247999999999998654333322222211 1 12346666655 889
Q ss_pred EEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCC
Q 015684 194 YFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGIS 273 (402)
Q Consensus 194 ~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~ 273 (402)
++|||..+... .+.+.+..+|++||+++|++.++. ..+++|+|+|||+........ .....
T Consensus 129 i~lds~~~~~~---~~~~~~~~~ql~WL~~~L~~~~~~---------~~~~~iv~~H~P~~~~~~~~~-------~~~~~ 189 (262)
T cd07395 129 IVLNSQLFFDP---SEVPELAQAQDVWLEEQLEIAKES---------DCKHVIVFQHIPWFLEDPDEE-------DSYFN 189 (262)
T ss_pred EEeccccccCc---cccccchHHHHHHHHHHHHHHHhc---------cCCcEEEEECcCCccCCCCCC-------cccCC
Confidence 99999654321 124568899999999999876532 567899999999964221110 00111
Q ss_pred CCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEee
Q 015684 274 SASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASL 340 (402)
Q Consensus 274 ~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~~ 340 (402)
....+...+..++++++|+++||||+|.+.. ..+.|+.++.++++|+. ++. ..+|+|+++++.
T Consensus 190 ~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~-~~~~g~~~~~~~~~~~~-~~~--~~~g~~~~~v~~ 252 (262)
T cd07395 190 IPKSVRKPLLDKFKKAGVKAVFSGHYHRNAG-GRYGGLEMVVTSAIGAQ-LGN--DKSGLRIVKVTE 252 (262)
T ss_pred cCHHHHHHHHHHHHhcCceEEEECccccCCc-eEECCEEEEEcCceecc-cCC--CCCCcEEEEECC
Confidence 1223456677778888999999999999655 56789998888888853 332 479999999974
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=210.76 Aligned_cols=234 Identities=24% Similarity=0.239 Sum_probs=148.4
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+|+||+|++........... ...+.++.+.+.+++.+||+||++||++ +.+.....+.+....+.+...
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~-------~~~~~l~~~i~~i~~~~~d~vv~~GDlv-~~~~~~~~~~~~~~~~~l~~l 72 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYR-------NSLEKLEEAVEEWNRESLDFVVQLGDII-DGDNARAEEALDAVLAILDRL 72 (267)
T ss_pred CeEEEEeccccccCCCcccchHH-------HhHHHHHHHHHHHHcCCCCEEEECCCee-cCCCchHHHHHHHHHHHHHhc
Confidence 79999999998764321110000 1123344455556667899999999955 444442233343444444456
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCCC
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYST 203 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~ 203 (402)
++|++++|||||....... . .. . .. ....+..+|.+..++ ++++++||..++.
T Consensus 73 ~~p~~~v~GNHD~~~~~~~-~----~~-~-------~~---~~~~~~~yysf~~~~-----------~~~i~lds~~~~~ 125 (267)
T cd07396 73 KGPVHHVLGNHDLYNPSRE-Y----LL-L-------YT---LLGLGAPYYSFSPGG-----------IRFIVLDGYDISA 125 (267)
T ss_pred CCCEEEecCccccccccHh-h----hh-c-------cc---ccCCCCceEEEecCC-----------cEEEEEeCCcccc
Confidence 8999999999998644321 1 00 0 00 011233467777655 8899999964321
Q ss_pred CC---C----------------------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhc
Q 015684 204 VP---S----------------------VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAY 258 (402)
Q Consensus 204 ~~---~----------------------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~ 258 (402)
.. . ....|.++++|++||+++|++.+. ...++|+++|||+.....
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~----------~~~~viV~~Hhp~~~~~~ 195 (267)
T cd07396 126 LGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA----------NGEKVIIFSHFPLHPEST 195 (267)
T ss_pred ccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh----------cCCeEEEEEeccCCCCCC
Confidence 10 0 012478999999999999887653 457899999999854211
Q ss_pred ccCCCcccccCCcCCCCCCChHHHHHHHHc-CCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEE
Q 015684 259 FDQSNFTGVRQEGISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVV 337 (402)
Q Consensus 259 ~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~-~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~e 337 (402)
. . .....+.+.+..++++ .+|+++|+||+|.+ .....+|+.++..|+++.+ ++ ..+.+-+++
T Consensus 196 -~--------~---~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~gi~~~~~~a~~~~--~~--~~~~~~~~~ 258 (267)
T cd07396 196 -S--------P---HGLLWNHEEVLSILRAYGCVKACISGHDHEG-GYAQRHGIHFLTLEGMVET--PP--ESNAFGVVI 258 (267)
T ss_pred -C--------c---cccccCHHHHHHHHHhCCCEEEEEcCCcCCC-CccccCCeeEEEechhhcC--CC--CCCceEEEE
Confidence 0 0 0112355566677766 58999999999995 4556899999999999887 32 245677777
Q ss_pred Ee
Q 015684 338 AS 339 (402)
Q Consensus 338 i~ 339 (402)
+.
T Consensus 259 ~~ 260 (267)
T cd07396 259 VY 260 (267)
T ss_pred Ee
Confidence 75
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=202.38 Aligned_cols=227 Identities=23% Similarity=0.291 Sum_probs=147.0
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
||+++||+|++......+... .....++.+.+.+++. +||+||++|| +.+.+....++.+.+.++.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~--------~~~~~l~~~~~~i~~~~~~~d~vi~~GD-l~~~~~~~~~~~~~~~l~~--- 68 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGV--------DTAASLEAVLAHINALHPRPDLVLVTGD-LTDDGSPESYERLRELLAA--- 68 (240)
T ss_pred CEEEEeCCccCCCCcceecCc--------CHHHHHHHHHHHHHhcCCCCCEEEECcc-CCCCCCHHHHHHHHHHHhh---
Confidence 699999999986532111100 1233445566666665 9999999999 5555555666666666654
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCC
Q 015684 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYS 202 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~ 202 (402)
.++|+++|+||||... ...+.+.. .. . ..+..+|.+.+.+ ++++++||....
T Consensus 69 ~~~p~~~v~GNHD~~~-----~~~~~~~~----------~~-~-~~~~~~~~~~~~~-----------~~~i~lds~~~~ 120 (240)
T cd07402 69 LPIPVYLLPGNHDDRA-----AMRAVFPE----------LP-P-APGFVQYVVDLGG-----------WRLILLDSSVPG 120 (240)
T ss_pred cCCCEEEeCCCCCCHH-----HHHHhhcc----------cc-c-cccccceeEecCC-----------EEEEEEeCCCCC
Confidence 5899999999999732 11122111 00 0 1223456776665 899999995322
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHH
Q 015684 203 TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282 (402)
Q Consensus 203 ~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l 282 (402)
. ..++++++|++||++.|++. ..+++|+++|||+......+. .. ....+...+
T Consensus 121 ~-----~~~~~~~~ql~wL~~~L~~~------------~~~~~il~~H~pp~~~~~~~~------~~----~~~~~~~~~ 173 (240)
T cd07402 121 Q-----HGGELCAAQLDWLEAALAEA------------PDKPTLVFLHHPPFPVGIAWM------DA----IGLRNAEAL 173 (240)
T ss_pred C-----cCCEECHHHHHHHHHHHHhC------------CCCCEEEEECCCCccCCchhh------hh----hhCCCHHHH
Confidence 1 35679999999999997642 457899999998854211110 00 112355666
Q ss_pred HHHHHcC-CeeEEEeccCCCCcccccCCCeeEEecCCccCCCC--CC----CCCCcceEEEEEe
Q 015684 283 TTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAY--GK----AGWERRARVVVAS 339 (402)
Q Consensus 283 ~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y--~~----~~~~~g~rv~ei~ 339 (402)
..+++++ +++++||||+|. ......+|++++.+++.|++-- .+ ..-..|++-+.+.
T Consensus 174 ~~~l~~~~~v~~v~~GH~H~-~~~~~~~g~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (240)
T cd07402 174 AAVLARHPNVRAILCGHVHR-PIDGSWGGIPLLTAPSTCHQFAPDLDDFALDALAPGYRALSLH 236 (240)
T ss_pred HHHHhcCCCeeEEEECCcCc-hHHeEECCEEEEEcCcceeeecCCCCcccccccCCCCcEEEEe
Confidence 6777776 899999999999 5777889999999999886421 11 1123477776664
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.2e-25 Score=204.68 Aligned_cols=263 Identities=16% Similarity=0.111 Sum_probs=158.6
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHHHHHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFA 118 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l~ 118 (402)
+.++||++++|+|.+... ..++++.+.+. ..+||+||++||++++.+.. ..++.+.+.++
T Consensus 2 ~~~~~f~v~gD~~~~~~~----------------~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~ 63 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNN----------------STNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIE 63 (294)
T ss_pred CCcEEEEEEEECCCCCCC----------------cHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHH
Confidence 568999999999975221 12333333332 47999999999977666543 56677777777
Q ss_pred HhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeC
Q 015684 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (402)
Q Consensus 119 ~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs 198 (402)
++. ..+|+++++||||............. .. ....+.......+..+|++.+++ +++++|||
T Consensus 64 ~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~Ysf~~g~-----------v~fi~Lds 125 (294)
T cd00839 64 PLA-SYVPYMVTPGNHEADYNFSFYKIKAF----FP--RFRFPHSPSGSTSNLWYSFDVGP-----------VHFVSLST 125 (294)
T ss_pred HHH-hcCCcEEcCcccccccCCCCcccccc----cc--cccccCCCCCCCCCceEEEeeCC-----------EEEEEEec
Confidence 654 47999999999998654331110000 00 00001000111223468888776 89999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCC
Q 015684 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (402)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~ 278 (402)
..... .+.+..+|++||++.|++..+ ...+++|+++|+|++...... ... ......
T Consensus 126 ~~~~~------~~~~~~~q~~WL~~~L~~~~~---------~~~~~~iv~~H~P~~~~~~~~-------~~~--~~~~~~ 181 (294)
T cd00839 126 EVDFY------GDGPGSPQYDWLEADLAKVDR---------SKTPWIIVMGHRPMYCSNTDH-------DDC--IEGEKM 181 (294)
T ss_pred ccccc------cCCCCcHHHHHHHHHHHHhcc---------cCCCeEEEEeccCcEecCccc-------ccc--chhHHH
Confidence 53321 356889999999999886543 134568999999996532111 000 001124
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCccccc---------------CCCeeEEecCCccCCCCCC------CC------CCc
Q 015684 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGR---------------LTGIQLCYGGGFGYHAYGK------AG------WER 331 (402)
Q Consensus 279 ~~~l~~l~~~~~v~~v~~GH~H~~~~~~~---------------~~gi~~~~~~~~g~~~y~~------~~------~~~ 331 (402)
.+.|..|+++++|+++|+||+|.+.+... .+|+..+..|+.|...+.. .. ...
T Consensus 182 ~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~ 261 (294)
T cd00839 182 RAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDY 261 (294)
T ss_pred HHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccC
Confidence 46778888888999999999998654322 2566666666555332211 01 235
Q ss_pred ceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeee
Q 015684 332 RARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLW 374 (402)
Q Consensus 332 g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~ 374 (402)
|+-++++..+ ..-...|++..++ +++|..+|.
T Consensus 262 g~~~~~~~~~---------t~l~~~~~~~~~g--~v~D~f~i~ 293 (294)
T cd00839 262 GFGRLTVHNS---------THLHFEWIRNDDG--VVIDSFWII 293 (294)
T ss_pred CEEEEEEEec---------CeEEEEEEECCCC--eEEEEEEEe
Confidence 6666665421 1234455666655 488887764
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.6e-23 Score=197.84 Aligned_cols=263 Identities=19% Similarity=0.167 Sum_probs=156.7
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
.+++|++++|+|..... .. ..+.+++.+||+|+++||+++.+.....++.+.+.++++.
T Consensus 138 ~~~~f~v~GDlG~~~~~-----------------~~----tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~ 196 (427)
T PLN02533 138 FPIKFAVSGDLGTSEWT-----------------KS----TLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLA 196 (427)
T ss_pred CCeEEEEEEeCCCCccc-----------------HH----HHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHh
Confidence 57999999999853211 11 2233456799999999997776554455667777777664
Q ss_pred hCCCCEEEEcCCCCCCCCCC--HHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCC
Q 015684 122 ASNIPWVAVLGNHDQESTLS--REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~ 199 (402)
..+|+++++||||...... ......+...+ ..|.......+..+|++.+++ +++++|||.
T Consensus 197 -s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf------~mP~~~~g~~~~~yYSfd~g~-----------vhfI~Lds~ 258 (427)
T PLN02533 197 -SQRPWMVTHGNHELEKIPILHPEKFTAYNARW------RMPFEESGSTSNLYYSFNVYG-----------VHIIMLGSY 258 (427)
T ss_pred -hcCceEEeCccccccccccccCcCccchhhcc------cCCccccCCCCCceEEEEECC-----------EEEEEEeCC
Confidence 5799999999999864210 00000111111 111110001123468888887 899999994
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCCh
Q 015684 200 DYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNS 279 (402)
Q Consensus 200 ~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~ 279 (402)
.. + ....+|++||++.|++..+ ....++|+++|+|++...... .+.. +. ....
T Consensus 259 ~~--------~-~~~~~Q~~WLe~dL~~~~r---------~~~pwiIv~~H~P~y~s~~~~----~~~~-~~----~~~r 311 (427)
T PLN02533 259 TD--------F-EPGSEQYQWLENNLKKIDR---------KTTPWVVAVVHAPWYNSNEAH----QGEK-ES----VGMK 311 (427)
T ss_pred cc--------c-cCchHHHHHHHHHHHhhcc---------cCCCEEEEEeCCCeeeccccc----CCcc-hh----HHHH
Confidence 21 1 1367899999999987643 144568899999997632111 0000 00 0123
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCccccc-------CCCeeEEecCCccCC-----CCC--CCCC------CcceEEEEEe
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGR-------LTGIQLCYGGGFGYH-----AYG--KAGW------ERRARVVVAS 339 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~-------~~gi~~~~~~~~g~~-----~y~--~~~~------~~g~rv~ei~ 339 (402)
+.|+.|+.+++|+++|+||+|.+.+... ..|...+..|+.|.. .+. .+.| .-|+-.+++.
T Consensus 312 ~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~~l~v~ 391 (427)
T PLN02533 312 ESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVV 391 (427)
T ss_pred HHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEEEEEEE
Confidence 5678888889999999999998654321 234444444444421 111 1112 1233333332
Q ss_pred eccccccCCCcccceEEEEEcCCCCCCcccceeeeecCCC
Q 015684 340 LEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379 (402)
Q Consensus 340 ~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~~~ 379 (402)
. ..+-..+|+|++++..++.|+.||.+...+
T Consensus 392 n---------~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~ 422 (427)
T PLN02533 392 D---------ANTMEWTWHRNDDDQSVASDSVWLKSLLTE 422 (427)
T ss_pred c---------CCeEEEEEEecCCCCceeeeEEEEEeccCC
Confidence 1 125566889988876668899888776554
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=180.78 Aligned_cols=160 Identities=18% Similarity=0.234 Sum_probs=108.3
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCCh-hhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA-TDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~-~~~~~~~~~~l~~~~~ 122 (402)
|+|+++||+|++...... ......+.+.+.+++.+||+||++||++ +.+. ...+..+.+.++.+.+
T Consensus 1 f~~~~~~D~q~~~~~~~~------------~~~~~~~~i~~~~~~~~~d~iv~~GDl~-~~~~~~~~~~~~~~~~~~l~~ 67 (214)
T cd07399 1 FTLAVLPDTQYYTESYPE------------VFDAQTDWIVDNAEALNIAFVLHLGDIV-DDGDNDAEWEAADKAFARLDK 67 (214)
T ss_pred CEEEEecCCCcCCcCCHH------------HHHHHHHHHHHHHHHcCCCEEEECCCcc-CCCCCHHHHHHHHHHHHHHHH
Confidence 689999999987542110 0122345566666678999999999955 4444 6678888888887766
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCC
Q 015684 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYS 202 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~ 202 (402)
.++|+++++||||. ++.+|+.
T Consensus 68 ~~~p~~~~~GNHD~--------------------------------------------------------~~~ld~~--- 88 (214)
T cd07399 68 AGIPYSVLAGNHDL--------------------------------------------------------VLALEFG--- 88 (214)
T ss_pred cCCcEEEECCCCcc--------------------------------------------------------hhhCCCC---
Confidence 78999999999992 1112331
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHH
Q 015684 203 TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282 (402)
Q Consensus 203 ~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l 282 (402)
.+.+|++||+++|++. +++++|+++|||+.... .+..... .+ .....+.+.|
T Consensus 89 ----------~~~~ql~WL~~~L~~~------------~~~~~iv~~H~p~~~~~-~~~~~~~-~~----~~~~~~~~~~ 140 (214)
T cd07399 89 ----------PRDEVLQWANEVLKKH------------PDRPAILTTHAYLNCDD-SRPDSID-YD----SDVNDGQQIW 140 (214)
T ss_pred ----------CCHHHHHHHHHHHHHC------------CCCCEEEEecccccCCC-CcCcccc-cc----cccccHHHHH
Confidence 3578999999997742 56789999999986421 1110000 00 0011233568
Q ss_pred HHHHHcC-CeeEEEeccCCCCc
Q 015684 283 TTMVAAG-DVKAVFTGHDHVND 303 (402)
Q Consensus 283 ~~l~~~~-~v~~v~~GH~H~~~ 303 (402)
.+|++++ +|+++||||+|...
T Consensus 141 ~~ll~~~~~V~~v~~GH~H~~~ 162 (214)
T cd07399 141 DKLVKKNDNVFMVLSGHVHGAG 162 (214)
T ss_pred HHHHhCCCCEEEEEccccCCCc
Confidence 7888776 89999999999853
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.4e-22 Score=184.56 Aligned_cols=220 Identities=18% Similarity=0.241 Sum_probs=135.7
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh-----HHHHHHHHHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-----AAKSLNAAFA 118 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~-----~~~~~~~~l~ 118 (402)
++|++++|...+... ......+.|.+.+++.+|||||++||++++.+... ..+.+.+.+.
T Consensus 1 ~~f~~~gD~g~~~~~---------------~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~ 65 (277)
T cd07378 1 LRFLALGDWGGGGTA---------------GQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYS 65 (277)
T ss_pred CeEEEEeecCCCCCH---------------HHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHcc
Confidence 478999999875211 12345567777777789999999999877765321 1123334443
Q ss_pred HhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeC
Q 015684 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (402)
Q Consensus 119 ~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs 198 (402)
.+ ..++|+++++||||........ ..+. ... ..+ +...+..+|++.....+ ....+++++|||
T Consensus 66 ~~-~~~~P~~~v~GNHD~~~~~~~~--~~~~-~~~-----~~~---~~~~~~~~y~~~~~~~~-----~~~~~~~i~LDt 128 (277)
T cd07378 66 AP-SLQVPWYLVLGNHDYSGNVSAQ--IDYT-KRP-----NSP---RWTMPAYYYRVSFPFPS-----SDTTVEFIMIDT 128 (277)
T ss_pred ch-hhcCCeEEecCCcccCCCchhe--eehh-ccC-----CCC---CccCcchheEEEeecCC-----CCCEEEEEEEeC
Confidence 33 2589999999999997543211 0000 000 011 11122245666654210 012389999999
Q ss_pred CCCCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcC
Q 015684 199 GDYSTVPS------VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (402)
Q Consensus 199 ~~~~~~~~------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~ 272 (402)
..+..... ....+.+..+|++||++.|++. ..+++||++|||+....... ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~------------~~~~~iv~~H~P~~~~~~~~------~~---- 186 (277)
T cd07378 129 VPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAAS------------TADWKIVVGHHPIYSSGEHG------PT---- 186 (277)
T ss_pred hhHcCccccccccccCcchhhHHHHHHHHHHHHHhc------------CCCeEEEEeCccceeCCCCC------Cc----
Confidence 76532211 1124678999999999997643 34789999999986521110 00
Q ss_pred CCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCC--CeeEEecCCccC
Q 015684 273 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLT--GIQLCYGGGFGY 321 (402)
Q Consensus 273 ~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~--gi~~~~~~~~g~ 321 (402)
......+..++++++|+++|+||+|... ....+ |+.++.+|+.|.
T Consensus 187 ---~~~~~~l~~l~~~~~v~~vl~GH~H~~~-~~~~~~~~~~~i~~G~~~~ 233 (277)
T cd07378 187 ---SCLVDRLLPLLKKYKVDAYLSGHDHNLQ-HIKDDGSGTSFVVSGAGSK 233 (277)
T ss_pred ---HHHHHHHHHHHHHcCCCEEEeCCcccce-eeecCCCCcEEEEeCCCcc
Confidence 0123567778888889999999999854 33444 888777766554
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-22 Score=181.09 Aligned_cols=206 Identities=16% Similarity=0.168 Sum_probs=119.2
Q ss_pred EEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCCh--------hhHHHHHHHHH
Q 015684 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--------TDAAKSLNAAF 117 (402)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~--------~~~~~~~~~~l 117 (402)
|+|+||+|++...... .....+.+.+.+++.+||+||++||++..... ...++.+.+.+
T Consensus 2 ~~~iSDlH~g~~~~~~-------------~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~ 68 (256)
T cd07401 2 FVHISDIHVSSFHPPN-------------RAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNIL 68 (256)
T ss_pred EEEecccccCCcCchh-------------hhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHH
Confidence 7999999999653211 00011446677788899999999996654321 12233444444
Q ss_pred hHhHhC-CCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEe--ccCCCCCCCCceeEEEE
Q 015684 118 APAIAS-NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEI--GGVKGSGFENKSVLNLY 194 (402)
Q Consensus 118 ~~~~~~-~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~--~~~~~~~~~~~~~~~l~ 194 (402)
...... .+|++.++||||.......+...+.+..+. ... ......|.... ++ +.++
T Consensus 69 ~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~---~~~-------~~~~~~~~~~~~~~~-----------~~~I 127 (256)
T cd07401 69 KESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYS---ATG-------RDGSFSFSHTTRFGN-----------YSFI 127 (256)
T ss_pred HHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhh---eec-------CCCccceEEEecCCC-----------EEEE
Confidence 332222 589999999999965433222222221110 000 01111222221 22 8899
Q ss_pred EEeCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCC
Q 015684 195 FLDSGDYSTVP-SVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGIS 273 (402)
Q Consensus 195 ~lDs~~~~~~~-~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~ 273 (402)
+|||..+.... .....|.+.++|++||++.|++.. ..+++||++|||+....... .
T Consensus 128 ~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~~~L~~~~-----------~~~~~IV~~HhP~~~~~~~~--------~---- 184 (256)
T cd07401 128 GVDPTLFPGPKRPFNFFGSLDKKLLDRLEKELEKST-----------NSNYTIWFGHYPTSTIISPS--------A---- 184 (256)
T ss_pred EEcCccCCCCCCCCceeccCCHHHHHHHHHHHHhcc-----------cCCeEEEEEcccchhccCCC--------c----
Confidence 99997542111 111347899999999999877542 44679999999984311000 0
Q ss_pred CCCCChHHHHHHHHcCCeeEEEeccCCCCcc-c-ccCCCe
Q 015684 274 SASVNSGFFTTMVAAGDVKAVFTGHDHVNDF-C-GRLTGI 311 (402)
Q Consensus 274 ~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~-~-~~~~gi 311 (402)
....+ +..++++++|+++||||+|.+.. . ..++|+
T Consensus 185 --~~~~~-~~~ll~~~~v~~vl~GH~H~~~~~~p~h~~~~ 221 (256)
T cd07401 185 --KSSSK-FKDLLKKYNVTAYLCGHLHPLGGLEPVHYAGH 221 (256)
T ss_pred --chhHH-HHHHHHhcCCcEEEeCCccCCCcceeeeecCC
Confidence 01123 66677777899999999999544 1 234555
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-21 Score=180.22 Aligned_cols=222 Identities=20% Similarity=0.240 Sum_probs=130.5
Q ss_pred EEEEeccCCcCCC----C--CCCCCCCc------------cccc--CC-CChhHHHHHHHHHHhc--CCCEEEEcCCccC
Q 015684 46 ILQVADMHFANGK----T--TPCLDVLP------------SQVA--GC-SDLNTTAFINRMISAE--KPDLIVFTGDNIF 102 (402)
Q Consensus 46 i~~iSDlH~~~~~----~--~~~~~~~~------------~~~~--~~-~~~~~~~~l~~~i~~~--~pD~vv~~GDli~ 102 (402)
|+|+||+|++... . ..|..... ..++ .| ....+++.+.+.+++. +|||||++||++.
T Consensus 1 ~l~~sDiH~D~~Y~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~ 80 (296)
T cd00842 1 FLHISDIHYDPLYKVGSEYSANCHSPLCCRDESGDISPPAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVR 80 (296)
T ss_pred CEEeeccCCCCCCcCCCCCcCCCCCCCccCCCCCCCCCCCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCC
Confidence 6899999998433 1 33443321 1112 13 4456677777777766 9999999999666
Q ss_pred CCChhhHHH-----HHHHHHhHhHh--CCCCEEEEcCCCCCCCCC------CH----HHHHHHHHhcCCcccccCCCCC-
Q 015684 103 GFDATDAAK-----SLNAAFAPAIA--SNIPWVAVLGNHDQESTL------SR----EGVMKHIVTLKNTLSQVNPSDA- 164 (402)
Q Consensus 103 ~~~~~~~~~-----~~~~~l~~~~~--~~iP~~~v~GNHD~~~~~------~~----~~~~~~~~~~~~~~~~~~p~~~- 164 (402)
........+ .+...+..+.+ .++|+++++||||..... .. +.+.+....+ .+.+.
T Consensus 81 h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~-------l~~~~~ 153 (296)
T cd00842 81 HDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSW-------LPEEAE 153 (296)
T ss_pred CCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhh-------cCHHHH
Confidence 654321111 12223332322 579999999999986431 11 1222222211 11110
Q ss_pred ccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCC
Q 015684 165 HIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVP--GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAP 242 (402)
Q Consensus 165 ~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~~~~~--~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~ 242 (402)
.....-++|...+.+ .+++++|||..+....... ..+....+|++||+++|+++++ .+
T Consensus 154 ~~~~~ggYY~~~~~~----------~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~----------~~ 213 (296)
T cd00842 154 ETFKKGGYYSVPVKP----------GLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQ----------AG 213 (296)
T ss_pred HHhhcceEEEEEcCC----------CeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHH----------CC
Confidence 111222556666322 2899999997664432211 1234568999999999998875 56
Q ss_pred CCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCC--eeEEEeccCCCCcccccC
Q 015684 243 APGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGD--VKAVFTGHDHVNDFCGRL 308 (402)
Q Consensus 243 ~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~--v~~v~~GH~H~~~~~~~~ 308 (402)
.+++|++|+|+....... . ....+.+..+++++. |.++|+||+|..++...+
T Consensus 214 ~~v~I~~HiPp~~~~~~~-------~-------~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~~~ 267 (296)
T cd00842 214 EKVWIIGHIPPGVNSYDT-------L-------ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRVFY 267 (296)
T ss_pred CeEEEEeccCCCCccccc-------c-------hHHHHHHHHHHHHHHHhhheeeecccccceEEEEe
Confidence 789999999985421000 0 123455677777764 789999999997665544
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.4e-20 Score=171.38 Aligned_cols=274 Identities=18% Similarity=0.211 Sum_probs=173.3
Q ss_pred CCcceeec----CCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh
Q 015684 32 QERKLRFR----QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT 107 (402)
Q Consensus 32 ~~~~l~~~----~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~ 107 (402)
+.+...|+ ++.+.++++++|+-....... + +.......++|+|++.||+.+..+..
T Consensus 132 wS~~f~F~t~p~~~~~~~~~i~GDlG~~~~~~s-----------------~---~~~~~~~~k~d~vlhiGDlsYa~~~~ 191 (452)
T KOG1378|consen 132 WSEIFSFKTPPGQDSPTRAAIFGDMGCTEPYTS-----------------T---LRNQEENLKPDAVLHIGDLSYAMGYS 191 (452)
T ss_pred cccceEeECCCCccCceeEEEEccccccccccc-----------------h---HhHHhcccCCcEEEEecchhhcCCCC
Confidence 34444554 346899999999988765421 1 11111223799999999988888766
Q ss_pred -hHHHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCC
Q 015684 108 -DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFE 186 (402)
Q Consensus 108 -~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~ 186 (402)
..++.+.+.++++. +.+|++++.||||....... .+ .++......|.........-+|++++++
T Consensus 192 n~~wD~f~r~vEp~A-s~vPymv~~GNHE~d~~~~~----~F---~~y~~Rf~mP~~~s~s~~~l~YSfd~G~------- 256 (452)
T KOG1378|consen 192 NWQWDEFGRQVEPIA-SYVPYMVCSGNHEIDWPPQP----CF---VPYSARFNMPGNSSESDSNLYYSFDVGG------- 256 (452)
T ss_pred ccchHHHHhhhhhhh-ccCceEEecccccccCCCcc----cc---cccceeeccCCCcCCCCCceeEEEeecc-------
Confidence 58889999999874 78999999999999765321 00 0111111112110111112468999988
Q ss_pred CceeEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCccc
Q 015684 187 NKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTG 266 (402)
Q Consensus 187 ~~~~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G 266 (402)
+++++|+|..+. +. ....+|.+||++.|++..+. +..++|++.|.|++......
T Consensus 257 ----vhfv~lsse~~~---~~----~~~~~QY~WL~~dL~~v~r~---------~tPWlIv~~HrP~Y~S~~~~------ 310 (452)
T KOG1378|consen 257 ----VHFVVLSTETYY---NF----LKGTAQYQWLERDLASVDRK---------KTPWLIVQGHRPMYCSSNDA------ 310 (452)
T ss_pred ----EEEEEEeccccc---cc----cccchHHHHHHHHHHHhccc---------CCCeEEEEecccceecCCch------
Confidence 999999996443 11 13567999999999988652 37899999999997643210
Q ss_pred ccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCC------------------eeEEecCCc---c-----
Q 015684 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTG------------------IQLCYGGGF---G----- 320 (402)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~g------------------i~~~~~~~~---g----- 320 (402)
...|+.. ..-...|+.|+-+++|+++|.||.|.+++....-+ +.+..|.+. +
T Consensus 311 ~~reG~~--~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~ 388 (452)
T KOG1378|consen 311 HYREGEF--ESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFS 388 (452)
T ss_pred hhccCcc--hhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCccc
Confidence 1112110 01124689999999999999999999765443211 222222111 1
Q ss_pred -----CCCCCCCCCCcceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecCCC
Q 015684 321 -----YHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379 (402)
Q Consensus 321 -----~~~y~~~~~~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~~~ 379 (402)
++.+.. -.-|+-++++.. + ++...+|.|+.+++.++.|..|+.+.-..
T Consensus 389 ~~~p~~Sa~R~--~dfG~~~L~v~N-----~----TH~~~~~~~~~d~~g~~~D~fwl~k~~~~ 441 (452)
T KOG1378|consen 389 SPQPEWSAFRE--GDFGYTRLTAKN-----G----THAHVHWVRNSDASGVVIDSFWLIKDYRD 441 (452)
T ss_pred CCCCccccccc--ccCCeEEEEEec-----C----ceEEEEEEeccCCCceEeeeEEEEcccCc
Confidence 111221 234677777752 1 37899999998877778999887765443
|
|
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=162.05 Aligned_cols=215 Identities=18% Similarity=0.071 Sum_probs=121.1
Q ss_pred EEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|.++||||++....... +.... ...+..+.+.+.++.. +||+||++||+ +..+..+. +.+.++.+...
T Consensus 1 ~~~~sDlHl~~~~~~~~-~~~g~-----~~~~~~~~i~~~~~~~~~~~D~viiaGDl-~~~~~~~~---~~~~l~~l~~l 70 (232)
T cd07393 1 IFAIADLHLNLDPTKPM-DVFGP-----EWKNHTEKIKENWDNVVAPEDIVLIPGDI-SWAMKLEE---AKLDLAWIDAL 70 (232)
T ss_pred CeEEEeeccCCCCCCCC-cccCc-----cHHHHHHHHHHHHHhcCCCCCEEEEcCCC-ccCCChHH---HHHHHHHHHhC
Confidence 46899999985321100 00000 1234556666666665 99999999994 44433222 22333333334
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCCC
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYST 203 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~ 203 (402)
..|+++|+||||.+. ...+.+.+.+..... . .. .+..+.+.+ +.++.++...+..
T Consensus 71 ~~~v~~V~GNHD~~~-~~~~~~~~~l~~~~~----------~-~~--~n~~~~~~~-----------i~i~G~~~~~~~~ 125 (232)
T cd07393 71 PGTKVLLKGNHDYWW-GSASKLRKALEESRL----------A-LL--FNNAYIDDD-----------VAICGTRGWDNPG 125 (232)
T ss_pred CCCeEEEeCCccccC-CCHHHHHHHHHhcCe----------E-Ee--ccCcEEECC-----------EEEEEEEeeCCCC
Confidence 568999999999843 233333333322100 0 00 022222222 5566665321111
Q ss_pred CCC--------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCC
Q 015684 204 VPS--------VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSA 275 (402)
Q Consensus 204 ~~~--------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~ 275 (402)
.+. ....+.+..+|++||++.|++.... ....++|+++|+|+....
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~--------~~~~~~i~~~H~p~~~~~------------------ 179 (232)
T cd07393 126 NPWPPINETLKVEEDEKIFERELERLELSLKAAKKR--------EKEKIKIVMLHYPPANEN------------------ 179 (232)
T ss_pred CccccccccccchhHHHHHHHHHHHHHHHHHHHHhC--------CCCCCEEEEECCCCcCCC------------------
Confidence 110 0112445678999999998876542 123579999999874310
Q ss_pred CCChHHHHHHHHcCCeeEEEeccCCCCcc----cccCCCeeEEecCCccCC
Q 015684 276 SVNSGFFTTMVAAGDVKAVFTGHDHVNDF----CGRLTGIQLCYGGGFGYH 322 (402)
Q Consensus 276 ~~~~~~l~~l~~~~~v~~v~~GH~H~~~~----~~~~~gi~~~~~~~~g~~ 322 (402)
.+...+..++++.+++++++||+|.... ....+|+.+...++++++
T Consensus 180 -~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~~~ 229 (232)
T cd07393 180 -GDDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGGIRYQLVSADYLN 229 (232)
T ss_pred -CCHHHHHHHHHHcCCCEEEECCCCCCcccccccceECCEEEEEEcchhcC
Confidence 1223345565666899999999998543 234789988877777654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=164.07 Aligned_cols=233 Identities=15% Similarity=0.093 Sum_probs=114.5
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCC
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASN 124 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 124 (402)
||+++||+|++.... ...+.++.+.+.+++.+||+||++||++ +.. ...+..+ +.+... .+
T Consensus 1 ki~~iSDlH~~~~~~--------------~~~~~l~~~~~~~~~~~~d~vv~~GDl~-~~~-~~~~~~~-~~l~~~--~~ 61 (239)
T TIGR03729 1 KIAFSSDLHIDLNHF--------------DTEEMLETLAQYLKKQKIDHLHIAGDIS-NDF-QRSLPFI-EKLQEL--KG 61 (239)
T ss_pred CEEEEEeecCCCCCC--------------CHHHHHHHHHHHHHhcCCCEEEECCccc-cch-hhHHHHH-HHHHHh--cC
Confidence 689999999852210 0122345566666678999999999954 432 2222222 233221 47
Q ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHh--cCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCC
Q 015684 125 IPWVAVLGNHDQESTLSREGVMKHIVT--LKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYS 202 (402)
Q Consensus 125 iP~~~v~GNHD~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~ 202 (402)
+|+++++||||.......+++.+.... +......+.-.+++.+.-.+.+.+.. +............+-+..++.
T Consensus 62 ~pv~~v~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~-~~~~~~~~~~~~~~d~~~~~~--- 137 (239)
T TIGR03729 62 IKVTFNAGNHDMLKDLTYEEIESNDSPLYLHNRFIDIPNTQWRIIGNNGWYDYSF-SNDKTSKEILRWKKSFWFDRR--- 137 (239)
T ss_pred CcEEEECCCCCCCCCCCHHHHHhccchhhhcccccccCCCceEEEeeccceeccc-ccccCHHHHHHhhhcEEeecc---
Confidence 899999999998644443333221100 00000000000000000000111111 000000000000000122221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHH
Q 015684 203 TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282 (402)
Q Consensus 203 ~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l 282 (402)
.......+.+.+++++||++.|++. ..+++|+++|||+....... . .+...-....+..++..+
T Consensus 138 -~~~~~~~~~~~~~~l~~l~~~l~~~------------~~~~~ivvtH~pP~~~~~~~--~-~~~~~~~~~~~~~~s~~l 201 (239)
T TIGR03729 138 -IKRPMSDPERTAIVLKQLKKQLNQL------------DNKQVIFVTHFVPHRDFIYV--P-MDHRRFDMFNAFLGSQHF 201 (239)
T ss_pred -cCCCCChHHHHHHHHHHHHHHHHhc------------CCCCEEEEEcccchHHHhcC--C-CCCcchhhhhhccChHHH
Confidence 1111124567889999999997643 45689999999764311100 0 000000000123466677
Q ss_pred HHHHHcCCeeEEEeccCCCCcccccCCCeeEEec
Q 015684 283 TTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYG 316 (402)
Q Consensus 283 ~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~ 316 (402)
..+++++++++++|||+|........+|++++..
T Consensus 202 ~~li~~~~v~~~i~GH~H~~~~~~~i~~~~~~~~ 235 (239)
T TIGR03729 202 GQLLVKYEIKDVIFGHLHRRFGPLTIGGTTYHNR 235 (239)
T ss_pred HHHHHHhCCCEEEECCccCCCCCEEECCEEEEec
Confidence 8888887999999999999432334588887654
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-18 Score=165.18 Aligned_cols=133 Identities=14% Similarity=0.175 Sum_probs=84.3
Q ss_pred ccccceEE-eccCCCCCCCCceeEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEE
Q 015684 169 GFGNYNLE-IGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLV 247 (402)
Q Consensus 169 g~~~y~~~-~~~~~~~~~~~~~~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv 247 (402)
+..+|++. ..+ +++++|||..+ +....|.++++|++||+++|++ .+++++||
T Consensus 290 G~~YYSFd~~gg-----------vrfIvLDSt~~----~G~~~G~L~eeQL~WLeqeLa~------------a~~k~VVV 342 (496)
T TIGR03767 290 GTGYYTFDIAGG-----------VRGISMDTTNR----AGGDEGSLGQTQFKWIKDTLRA------------SSDTLFVL 342 (496)
T ss_pred CCceEEEEeECC-----------EEEEEEeCCCc----CCCcCCccCHHHHHHHHHHHhc------------CCCCCEEE
Confidence 34567777 444 89999999632 1123688999999999999874 25678999
Q ss_pred EEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcC-CeeEEEeccCCCCcccccC--------CCeeEEecCC
Q 015684 248 YFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRL--------TGIQLCYGGG 318 (402)
Q Consensus 248 ~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~-~v~~v~~GH~H~~~~~~~~--------~gi~~~~~~~ 318 (402)
|+|||+......+.... .......+.+.+..+++.+ +|+++||||+|.+...... .|+|-+.++|
T Consensus 343 f~HHPp~s~g~~~~Dp~------~pg~~~~n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaS 416 (496)
T TIGR03767 343 FSHHTSWSMVNELTDPV------DPGEKRHLGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTAS 416 (496)
T ss_pred EECCCCccccccccccc------cccccccCHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccc
Confidence 99999854322221110 0001123554555555554 8999999999996533211 2455444332
Q ss_pred ccCCCCCCCCCCcceEEEEEeec
Q 015684 319 FGYHAYGKAGWERRARVVVASLE 341 (402)
Q Consensus 319 ~g~~~y~~~~~~~g~rv~ei~~~ 341 (402)
- ..|+.-+|+|||..+
T Consensus 417 l-------vdfPq~~Ri~Ei~~n 432 (496)
T TIGR03767 417 H-------IDFPQQGRIIELADN 432 (496)
T ss_pred c-------ccCCCCceEEEEEeC
Confidence 1 236778999999854
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.8e-18 Score=158.04 Aligned_cols=252 Identities=12% Similarity=0.110 Sum_probs=144.1
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh-----hHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-----DAAKSLNA 115 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~-----~~~~~~~~ 115 (402)
++.++|+.++|.--+... .....+.|.+++++.++||||-+||++ .+|.. .....+.+
T Consensus 24 ~~~l~F~~vGDwG~g~~~----------------Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~ 86 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQ----------------QKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFEN 86 (394)
T ss_pred CCeEEEEEEecCCCCchh----------------HHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhh
Confidence 578899999999843211 334567788888889999999999976 45422 12223334
Q ss_pred HHhHhH-hCCCCEEEEcCCCCCCCCCCHHHHHHHHHh---------cCCcc-cccCCCCCccccccccceE--EeccCCC
Q 015684 116 AFAPAI-ASNIPWVAVLGNHDQESTLSREGVMKHIVT---------LKNTL-SQVNPSDAHIIDGFGNYNL--EIGGVKG 182 (402)
Q Consensus 116 ~l~~~~-~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~---------~~~~~-~~~~p~~~~~~~g~~~y~~--~~~~~~~ 182 (402)
...... ...+||+.|+||||...+... ++...... +.+.. ....| ++.....+|.+ .+....+
T Consensus 87 vY~~~s~~L~~Pwy~vLGNHDy~Gn~~A-Qi~r~~~~y~~~~~~~~~~y~~~~~~~~---RW~mP~~yY~~~~~f~~~~~ 162 (394)
T PTZ00422 87 VYSEESGDMQIPFFTVLGQADWDGNYNA-ELLKGQNVYLNGHGQTDIEYDSNNDIYP---KWIMPNYWYHYFTHFTDTSG 162 (394)
T ss_pred hccCcchhhCCCeEEeCCcccccCCchh-hhccccccccccccccccccccccccCC---CccCCchhheeeeeeecccc
Confidence 443321 157899999999998655432 11111000 00000 00111 22222223432 1111000
Q ss_pred C----CCCCceeEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhc
Q 015684 183 S----GFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAY 258 (402)
Q Consensus 183 ~----~~~~~~~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~ 258 (402)
. .......+.++++||...+.. . .+....+.+++||+++|+..+ ....++||+.|||++....
T Consensus 163 ~~~~~~~~~~~~v~fifiDT~~l~~~--~-~~~~~~~~~w~~L~~~L~~a~----------k~a~WkIVvGHhPIySsG~ 229 (394)
T PTZ00422 163 PSLLKSGHKDMSVAFIFIDTWILSSS--F-PYKKVSERAWQDLKATLEYAP----------KIADYIIVVGDKPIYSSGS 229 (394)
T ss_pred cccccccCCCCEEEEEEEECchhccc--C-CccccCHHHHHHHHHHHHhhc----------cCCCeEEEEecCceeecCC
Confidence 0 001123478999999644321 1 123357789999999986432 2457999999999976321
Q ss_pred ccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCC----C-----CC
Q 015684 259 FDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK----A-----GW 329 (402)
Q Consensus 259 ~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~----~-----~~ 329 (402)
. |...+ =...+..|+++++|+++++||+|..++. ..+|+.++.+|+.|...++. + ..
T Consensus 230 h------g~~~~-------L~~~L~PLL~ky~VdlYisGHDH~lq~i-~~~gt~yIvSGaGs~~~~~~~~~~~~s~F~~~ 295 (394)
T PTZ00422 230 S------KGDSY-------LSYYLLPLLKDAQVDLYISGYDRNMEVL-TDEGTAHINCGSGGNSGRKSIMKNSKSLFYSE 295 (394)
T ss_pred C------CCCHH-------HHHHHHHHHHHcCcCEEEEccccceEEe-cCCCceEEEeCccccccCCCCCCCCCcceecC
Confidence 1 00000 1146788999999999999999985443 45788888777654322211 0 12
Q ss_pred CcceEEEEEee
Q 015684 330 ERRARVVVASL 340 (402)
Q Consensus 330 ~~g~rv~ei~~ 340 (402)
..|+-.++++.
T Consensus 296 ~~GF~~~~l~~ 306 (394)
T PTZ00422 296 DIGFCIHELNA 306 (394)
T ss_pred CCCEEEEEEec
Confidence 35677777663
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=150.85 Aligned_cols=218 Identities=20% Similarity=0.268 Sum_probs=125.9
Q ss_pred cCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh-----hHHHHH
Q 015684 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-----DAAKSL 113 (402)
Q Consensus 39 ~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~-----~~~~~~ 113 (402)
+++++++|+++.|......- ........|.++.++...||||-+||++++.|.. ...+.+
T Consensus 39 ~~dgslsflvvGDwGr~g~~---------------nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF 103 (336)
T KOG2679|consen 39 KSDGSLSFLVVGDWGRRGSF---------------NQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSF 103 (336)
T ss_pred CCCCceEEEEEcccccCCch---------------hHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhh
Confidence 36799999999999832211 1223334455555668999999999999998743 233334
Q ss_pred HHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccce----EEeccCCCCCCCCce
Q 015684 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYN----LEIGGVKGSGFENKS 189 (402)
Q Consensus 114 ~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~----~~~~~~~~~~~~~~~ 189 (402)
..+...- .+..|||.|.||||..++.. .++...+.+... +++..-..|. ++....+
T Consensus 104 ~nIYT~p-SLQkpWy~vlGNHDyrGnV~-AQls~~l~~~d~----------RW~c~rsf~~~ae~ve~f~v~-------- 163 (336)
T KOG2679|consen 104 ENIYTAP-SLQKPWYSVLGNHDYRGNVE-AQLSPVLRKIDK----------RWICPRSFYVDAEIVEMFFVD-------- 163 (336)
T ss_pred hhcccCc-ccccchhhhccCccccCchh-hhhhHHHHhhcc----------ceecccHHhhcceeeeeeccc--------
Confidence 3333321 25679999999999987754 233333332211 1111111111 1111111
Q ss_pred eEEEEEEeCCCCCCCCCCCCCCC--------CCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccC
Q 015684 190 VLNLYFLDSGDYSTVPSVPGYGW--------IKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQ 261 (402)
Q Consensus 190 ~~~l~~lDs~~~~~~~~~~~~g~--------i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~ 261 (402)
...++.|+-. .+....++| +-..++.||+..|++. ..+++||+.|||+......
T Consensus 164 -~~~f~~d~~~---~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S------------~a~wkiVvGHh~i~S~~~H-- 225 (336)
T KOG2679|consen 164 -TTPFMDDTFT---LCTDDVYDWRGVLPRVKYLRALLSWLEVALKAS------------RAKWKIVVGHHPIKSAGHH-- 225 (336)
T ss_pred -cccchhhhee---cccccccccccCChHHHHHHHHHHHHHHHHHHh------------hcceEEEecccceehhhcc--
Confidence 1122222211 111111222 3456788998886643 5679999999999653211
Q ss_pred CCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCccccc-CCCeeEEecCCcc
Q 015684 262 SNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR-LTGIQLCYGGGFG 320 (402)
Q Consensus 262 ~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~-~~gi~~~~~~~~g 320 (402)
|.-.+ =.+.+..+++..+|+++++||+|.-..... ..+|.++.+|+..
T Consensus 226 ----G~T~e-------L~~~LlPiL~~n~VdlY~nGHDHcLQhis~~e~~iqf~tSGagS 274 (336)
T KOG2679|consen 226 ----GPTKE-------LEKQLLPILEANGVDLYINGHDHCLQHISSPESGIQFVTSGAGS 274 (336)
T ss_pred ----CChHH-------HHHHHHHHHHhcCCcEEEecchhhhhhccCCCCCeeEEeeCCcc
Confidence 11111 114567788899999999999998655444 5788888766543
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=150.25 Aligned_cols=186 Identities=17% Similarity=0.214 Sum_probs=110.0
Q ss_pred EEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCC
Q 015684 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNI 125 (402)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~i 125 (402)
|+++||+|.... .+.. ..+++.+||+||++|| +++.+....+..+ +.+ ...++
T Consensus 1 i~~~sD~H~~~~--------------------~~~~--~~~~~~~~D~vv~~GD-l~~~~~~~~~~~~-~~l---~~~~~ 53 (188)
T cd07392 1 ILAISDIHGDVE--------------------KLEA--IILKAEEADAVIVAGD-ITNFGGKEAAVEI-NLL---LAIGV 53 (188)
T ss_pred CEEEEecCCCHH--------------------HHHH--HHhhccCCCEEEECCC-ccCcCCHHHHHHH-HHH---HhcCC
Confidence 689999997531 1111 3456679999999999 6666555444444 333 34689
Q ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCCCCC
Q 015684 126 PWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVP 205 (402)
Q Consensus 126 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~~ 205 (402)
|+++|+||||... ..+... +.. .... +..+.+.+ +.++.+++.... +
T Consensus 54 p~~~v~GNHD~~~------~~~~~~----------~~~-~~~~---~~~~~~~~-----------~~~~g~~~~~~~--~ 100 (188)
T cd07392 54 PVLAVPGNCDTPE------ILGLLT----------SAG-LNLH---GKVVEVGG-----------YTFVGIGGSNPT--P 100 (188)
T ss_pred CEEEEcCCCCCHH------HHHhhh----------cCc-EecC---CCEEEECC-----------EEEEEeCCCCCC--C
Confidence 9999999999721 111110 000 0111 12233333 778888874211 1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHH
Q 015684 206 SVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTM 285 (402)
Q Consensus 206 ~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l 285 (402)
. ...+.++++|++|+ +. +.. ...++.|+++|+|+... +..... . ....++..+..+
T Consensus 101 ~-~~~~~~~~~~l~~~-~~---l~~---------~~~~~~ilv~H~pp~~~---~~d~~~---~----~~~~g~~~l~~l 156 (188)
T cd07392 101 F-NTPIELSEEEIVSD-GR---LNN---------LLAKNLILVTHAPPYGT---AVDRVS---G----GFHVGSKAIRKF 156 (188)
T ss_pred C-CCccccCHHHHHHh-hh---hhc---------cCCCCeEEEECCCCcCC---cccccC---C----CCccCCHHHHHH
Confidence 1 12456788999998 22 222 25678999999988441 100000 0 011356778888
Q ss_pred HHcCCeeEEEeccCCCCcccccCCCeeEEe
Q 015684 286 VAAGDVKAVFTGHDHVNDFCGRLTGIQLCY 315 (402)
Q Consensus 286 ~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~ 315 (402)
+++.++++++|||+|......+.++++++.
T Consensus 157 i~~~~~~~~l~GH~H~~~~~~~~~~~~~~n 186 (188)
T cd07392 157 IEERQPLLCICGHIHESRGVDKIGNTLVVN 186 (188)
T ss_pred HHHhCCcEEEEeccccccceeeeCCeEEec
Confidence 888889999999999943233455654443
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=157.21 Aligned_cols=210 Identities=19% Similarity=0.183 Sum_probs=116.3
Q ss_pred EEeccCCcCCCCCCCCCCCccc-ccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh-------HHHHHHHHHhH
Q 015684 48 QVADMHFANGKTTPCLDVLPSQ-VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-------AAKSLNAAFAP 119 (402)
Q Consensus 48 ~iSDlH~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~-------~~~~~~~~l~~ 119 (402)
.++|.|+-......-+.+.-.. .....|.-..+....++...+||+||++||+ ++.+... +++.+.+++.+
T Consensus 2 ~vaDpql~~~~sy~~~~~~~~~~~~~~~D~ylr~~~~~~~~~l~PD~vv~lGDL-~d~G~~~~~~~~~~~~~rf~~i~~~ 80 (257)
T cd08163 2 LVADPQLVDDHTYPGRPWILNTLTEHFVDNYLRRNWRYMQKQLKPDSTIFLGDL-FDGGRDWADEYWKKEYNRFMRIFDP 80 (257)
T ss_pred cccCCccccCCccCCCchhhhhhhHHhhHHHHHHHHHHHHHhcCCCEEEEeccc-ccCCeeCcHHHHHHHHHHHHHHhcC
Confidence 4678887655332212221111 0111222223334445556799999999995 5555432 12333333332
Q ss_pred hHhCCCCEEEEcCCCCCCCCCC--HHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEe
Q 015684 120 AIASNIPWVAVLGNHDQESTLS--REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLD 197 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lD 197 (402)
. ...+|+++||||||...... ......+.+ ..|..+|.+.+++ +++++||
T Consensus 81 ~-~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~----------------~Fg~~~~~~~~~~-----------~~fV~Ld 132 (257)
T cd08163 81 S-PGRKMVESLPGNHDIGFGNGVVLPVRQRFEK----------------YFGPTSRVIDVGN-----------HTFVILD 132 (257)
T ss_pred C-CccceEEEeCCCcccCCCCCCCHHHHHHHHH----------------HhCCCceEEEECC-----------EEEEEEc
Confidence 1 12479999999999843321 111111111 1122457777766 8899999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCC-------
Q 015684 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQE------- 270 (402)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~------- 270 (402)
|..... ...+.+...|.+|+++.++.. ....++|+++|+|++..... . .|..+|
T Consensus 133 s~~l~~----~~~~~~~~~~~~~l~~~l~~~-----------~~~~p~ILl~H~Plyr~~~~---~-cg~~re~~~~~~~ 193 (257)
T cd08163 133 TISLSN----KDDPDVYQPPREFLHSFSAMK-----------VKSKPRILLTHVPLYRPPNT---S-CGPLRESKTPLPY 193 (257)
T ss_pred cccccC----CcccccchhHHHHHHhhhhcc-----------CCCCcEEEEeccccccCCCC---C-CCCccccCCCCCC
Confidence 964322 124567889999999876532 26689999999999763221 1 121111
Q ss_pred --cCCCC-CCChHHHHHHHHcCCeeEEEeccCCCCccccc
Q 015684 271 --GISSA-SVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR 307 (402)
Q Consensus 271 --~~~~~-~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~ 307 (402)
+.... ....+.-+.|++.-++.+||+||+|. +|..
T Consensus 194 ~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~--~C~~ 231 (257)
T cd08163 194 GYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHD--YCEV 231 (257)
T ss_pred CCCccceeecCHHHHHHHHHhhCCcEEEecCCCc--ccee
Confidence 11111 12334455667776889999999996 6643
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-18 Score=161.01 Aligned_cols=201 Identities=23% Similarity=0.289 Sum_probs=123.2
Q ss_pred eEEEEEeccCCcC-CCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFAN-GKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
++|+||||+|++. ... ....+..+.+.++..+||+||++|| +++.+....++.+.+.+.. ..
T Consensus 1 ~~i~~isD~H~~~~~~~---------------~~~~~~~~~~~i~~~~~D~~v~tGD-l~~~~~~~~~~~~~~~l~~-~~ 63 (301)
T COG1409 1 MRIAHISDLHLGALGVD---------------SEELLEALLAAIEQLKPDLLVVTGD-LTNDGEPEEYRRLKELLAR-LE 63 (301)
T ss_pred CeEEEEecCcccccccc---------------hHHHHHHHHHHHhcCCCCEEEEccC-cCCCCCHHHHHHHHHHHhh-cc
Confidence 6899999999995 211 2344455666666789999999999 7888888888888888872 23
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCC
Q 015684 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYS 202 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~ 202 (402)
...|++++|||||.......... +. . .... .+....... ..++++.+||....
T Consensus 64 ~~~~~~~vpGNHD~~~~~~~~~~-~~----~-----~~~~---------~~~~~~~~~--------~~~~~~~~d~~~~~ 116 (301)
T COG1409 64 LPAPVIVVPGNHDARVVNGEAFS-DQ----F-----FNRY---------AVLVGACSS--------GGWRVIGLDSSVPG 116 (301)
T ss_pred CCCceEeeCCCCcCCchHHHHhh-hh----h-----cccC---------cceEeeccC--------CceEEEEecCCCCC
Confidence 67899999999998654332110 00 0 0000 011111000 12789999995332
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCC-CCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHH
Q 015684 203 TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAP-APGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281 (402)
Q Consensus 203 ~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~-~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 281 (402)
. ..|.+++.|++|+++.+++... .. ...+++.|||++..... ..... ..+...
T Consensus 117 ----~-~~G~~~~~q~~~l~~~l~~~~~----------~~~~~~v~~~hh~~~~~~~~-------~~~~~----l~~~~~ 170 (301)
T COG1409 117 ----V-PLGRLGAEQLDWLEEALAAAPE----------RAKDTVVVLHHHPLPSPGTG-------VDRVA----LRDAGE 170 (301)
T ss_pred ----C-CCCEECHHHHHHHHHHHHhCcc----------ccCceEEEecCCCCCCCCCc-------cceee----eecchh
Confidence 2 3678999999999999775432 11 13456666666432111 11111 123333
Q ss_pred HHHHHHcCC--eeEEEeccCCCCc-ccccCCCeeEE
Q 015684 282 FTTMVAAGD--VKAVFTGHDHVND-FCGRLTGIQLC 314 (402)
Q Consensus 282 l~~l~~~~~--v~~v~~GH~H~~~-~~~~~~gi~~~ 314 (402)
+..++.... ++++++||.|... ......+..+.
T Consensus 171 ~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~~~ 206 (301)
T COG1409 171 LLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGTRLS 206 (301)
T ss_pred HHHHHHhcCCceEEEEeCcccccccccceeCCeeee
Confidence 444444444 9999999999942 55556665555
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.1e-16 Score=135.59 Aligned_cols=196 Identities=15% Similarity=0.113 Sum_probs=113.0
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCC-hhhHHHHHHHHHhHhH
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD-ATDAAKSLNAAFAPAI 121 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~-~~~~~~~~~~~l~~~~ 121 (402)
.+||+.+||+|- +...++.+.+.+++.++|+||++|| +++.+ ..+.+..+.+. +.
T Consensus 4 ~~kIl~iSDiHg--------------------n~~~le~l~~~~~~~~~D~vv~~GD-l~~~g~~~~~~~~~l~~---l~ 59 (224)
T cd07388 4 VRYVLATSNPKG--------------------DLEALEKLVGLAPETGADAIVLIGN-LLPKAAKSEDYAAFFRI---LG 59 (224)
T ss_pred eeEEEEEEecCC--------------------CHHHHHHHHHHHhhcCCCEEEECCC-CCCCCCCHHHHHHHHHH---HH
Confidence 579999999993 2234455666666679999999999 66655 34444444343 33
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~ 201 (402)
..++|+++|+||||.. . .+.+.+.+.. ....|.. ..+.+ .+ ..+.+ .++++.++...
T Consensus 60 ~l~~pv~~V~GNhD~~--v-~~~l~~~~~~-----~~~~p~~-~~lh~--~~-~~~~g----------~~~~~GlGGs~- 116 (224)
T cd07388 60 EAHLPTFYVPGPQDAP--L-WEYLREAYNA-----ELVHPEI-RNVHE--TF-AFWRG----------PYLVAGVGGEI- 116 (224)
T ss_pred hcCCceEEEcCCCChH--H-HHHHHHHhcc-----cccCccc-eecCC--Ce-EEecC----------CeEEEEecCCc-
Confidence 4678999999999962 0 1111111100 0000111 11221 11 11111 15688888531
Q ss_pred CCCCCCCCCCCCCHHHH----HHH-HHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCC
Q 015684 202 STVPSVPGYGWIKPSQQ----FWF-EQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSAS 276 (402)
Q Consensus 202 ~~~~~~~~~g~i~~~q~----~Wl-~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~ 276 (402)
+. ....+++++ +|+ +..++.+.+. ...+.|+++|+|++... . ..
T Consensus 117 ---~~---~~e~sE~e~~~~~~~~~~~~l~~~~~~---------~~~~~VLv~H~PP~g~g---------~-------~h 165 (224)
T cd07388 117 ---AD---EGEPEEHEALRYPAWVAEYRLKALWEL---------KDYRKVFLFHTPPYHKG---------L-------NE 165 (224)
T ss_pred ---CC---CCCcCHHHHhhhhhhHHHHHHHHHHhC---------CCCCeEEEECCCCCCCC---------C-------Cc
Confidence 11 123466663 675 4444444431 45689999999996531 0 01
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCc
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGF 319 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~ 319 (402)
.++..+..++++++.++++|||+|. -.. .. |-+++.++++
T Consensus 166 ~GS~alr~~I~~~~P~l~i~GHih~-~~~-~~-g~t~vvNpg~ 205 (224)
T cd07388 166 QGSHEVAHLIKTHNPLVVLVGGKGQ-KHE-LL-GASWVVVPGD 205 (224)
T ss_pred cCHHHHHHHHHHhCCCEEEEcCCce-eEE-Ee-CCEEEECCCc
Confidence 4778889999999999999999994 222 33 4445555544
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.3e-17 Score=134.12 Aligned_cols=80 Identities=29% Similarity=0.368 Sum_probs=56.0
Q ss_pred EEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCC
Q 015684 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNI 125 (402)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~i 125 (402)
|+|+||+|++........ .....++.+.+.+++.+||+|+++|| +.+.+....++.+.+.++.+....+
T Consensus 1 il~isD~Hl~~~~~~~~~----------~~~~~l~~~~~~~~~~~~d~vi~~GD-l~~~~~~~~~~~~~~~~~~l~~~~~ 69 (144)
T cd07400 1 ILHLSDLHFGPERKPELL----------ALLSLLDRLLAEIKALDPDLVVITGD-LTQRGLPEEFEEAREFLDALPAPLE 69 (144)
T ss_pred CeEeCccCCCCCcchhHH----------HHHHHHHHHHHHHhccCCCEEEECCC-CCCCCCHHHHHHHHHHHHHccccCC
Confidence 689999999875432100 01111344566677789999999999 5556666667777777877654446
Q ss_pred CEEEEcCCCCC
Q 015684 126 PWVAVLGNHDQ 136 (402)
Q Consensus 126 P~~~v~GNHD~ 136 (402)
|+++++||||.
T Consensus 70 ~~~~v~GNHD~ 80 (144)
T cd07400 70 PVLVVPGNHDV 80 (144)
T ss_pred cEEEeCCCCeE
Confidence 99999999995
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-16 Score=142.36 Aligned_cols=90 Identities=23% Similarity=0.299 Sum_probs=58.8
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCC-hhhHHHHHHHHHhHhHhC
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD-ATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~-~~~~~~~~~~~l~~~~~~ 123 (402)
||+|+||+|++......... .+ ......+++.+.+.+.+.+||+||++||++.... .......+.+.+..+...
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRD---RR--REDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEA 75 (223)
T ss_pred CeEEeccccCCccccCcCcc---cc--hHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHC
Confidence 68999999999654321100 00 0012345566666667789999999999554432 223445566666665446
Q ss_pred CCCEEEEcCCCCCCCC
Q 015684 124 NIPWVAVLGNHDQEST 139 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~ 139 (402)
++|+++++||||....
T Consensus 76 ~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 76 GIPVFIIAGNHDSPSR 91 (223)
T ss_pred CCCEEEecCCCCCccc
Confidence 8999999999998654
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.5e-15 Score=141.98 Aligned_cols=132 Identities=18% Similarity=0.213 Sum_probs=72.1
Q ss_pred EEEEEEeCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEE-EecChhhhhcccCCCccc
Q 015684 191 LNLYFLDSGDYSTV---PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVY-FHIPLPEFAYFDQSNFTG 266 (402)
Q Consensus 191 ~~l~~lDs~~~~~~---~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~-~H~P~~~~~~~~~~~~~G 266 (402)
+++++|||..+... ++ ...|.++++|++||+++|++.. ...+.+++ .|+|+.............
T Consensus 305 lrvIvLDSt~~~~~~s~pG-~~~G~Ld~eQLaWLe~~La~a~-----------a~~p~VVV~hHpPi~t~gi~~md~w~~ 372 (492)
T TIGR03768 305 LKVIVLDDTQSEHDGSHDI-HGHGSLDAKRWDWLKAELARGQ-----------ADGQLMIIAAHIPIAVSPIGSEMEWWL 372 (492)
T ss_pred eEEEEECCCccccccCCCC-CcceeeCHHHHHHHHHHHHhCc-----------CCCceEEEEeCCCcccCCccchhhhcc
Confidence 59999999754432 12 2468899999999999987543 24455555 555664311100000000
Q ss_pred -c--cCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccC---------CCeeEEecCCccCCCCCCCCCCcceE
Q 015684 267 -V--RQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRL---------TGIQLCYGGGFGYHAYGKAGWERRAR 334 (402)
Q Consensus 267 -~--~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~---------~gi~~~~~~~~g~~~y~~~~~~~g~r 334 (402)
. ..+.+.......++++.|.++++|.++||||.|.+- ...+ .|.|-+-..| ..+|+.-+|
T Consensus 373 ~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~-v~a~~~p~~~~pe~gFWeveTaS-------l~DfPQq~R 444 (492)
T TIGR03768 373 GAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT-VKAFPSPDPARPEYGFWQVETAS-------LRDFPQQFR 444 (492)
T ss_pred ccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc-ccccCCCCCCCCcCceEEEeehh-------hccchhhce
Confidence 0 001111111112444444444589999999999853 3221 2344332221 235777899
Q ss_pred EEEEeecc
Q 015684 335 VVVASLEK 342 (402)
Q Consensus 335 v~ei~~~~ 342 (402)
+|||-.+.
T Consensus 445 ~~Ei~~n~ 452 (492)
T TIGR03768 445 TFEIYLNS 452 (492)
T ss_pred EEEEEeCC
Confidence 99998653
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.2e-17 Score=139.72 Aligned_cols=79 Identities=27% Similarity=0.412 Sum_probs=51.5
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++||+|++.... .. ....+.......+||+||++||++......................
T Consensus 1 ~ri~~isD~H~~~~~~---------------~~-~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 64 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD---------------SD-AFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNP 64 (200)
T ss_dssp EEEEEEEBBTTTHHHH---------------CH-HHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEcCCCCCCcch---------------hH-HHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhc
Confidence 7999999999875321 01 2345556666789999999999655554333222221123334457
Q ss_pred CCCEEEEcCCCCCCC
Q 015684 124 NIPWVAVLGNHDQES 138 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~ 138 (402)
.+|+++++||||...
T Consensus 65 ~~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 65 KIPVYFILGNHDYYS 79 (200)
T ss_dssp TTTEEEEE-TTSSHH
T ss_pred cccccccccccccce
Confidence 999999999999953
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3e-15 Score=137.77 Aligned_cols=80 Identities=28% Similarity=0.371 Sum_probs=54.6
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
.++||+++||+|++... ....++.+.+.+++.+||+|+++||++... .....+.+.+.++.+.
T Consensus 48 ~~~rI~~lSDlH~~~~~----------------~~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~ 110 (271)
T PRK11340 48 APFKILFLADLHYSRFV----------------PLSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLA 110 (271)
T ss_pred CCcEEEEEcccCCCCcC----------------CHHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHh
Confidence 46999999999986432 112335556667788999999999965422 2222334555666554
Q ss_pred hCCCCEEEEcCCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~ 139 (402)
. ..|+++|+||||....
T Consensus 111 ~-~~pv~~V~GNHD~~~~ 127 (271)
T PRK11340 111 E-CAPTFACFGNHDRPVG 127 (271)
T ss_pred h-cCCEEEecCCCCcccC
Confidence 3 4799999999998643
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-16 Score=135.26 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=42.1
Q ss_pred CCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecC
Q 015684 242 PAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGG 317 (402)
Q Consensus 242 ~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~ 317 (402)
.+++|+++|||+......+.. ...... ......+..++++++|++++|||+|.+ .....+|+.++.++
T Consensus 96 ~~~~vv~~HhpP~~~~~~~~~------~~~~~~-~~~~~~l~~~~~~~~v~~~i~GH~H~~-~~~~~~g~~~~~np 163 (166)
T cd07404 96 RGKTVVVTHHAPSPLSLAPQY------GDSLVN-AAFAVDLDDLILADPIDLWIHGHTHFN-FDYRIGGTRVLSNQ 163 (166)
T ss_pred CCCEEEEeCCCCCccccCccc------cCCCcc-hhhhhccHhHHhhcCCCEEEECCcccc-ceEEECCEEEEecC
Confidence 368999999987542222210 000000 011233556667788999999999995 56678888876554
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-13 Score=132.84 Aligned_cols=89 Identities=22% Similarity=0.342 Sum_probs=57.0
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh--HHHHHHHHHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNAAFAP 119 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~~l~~ 119 (402)
+.|||+|+||+|+|.......+.. ...++++.+.+.+.+++||+||++|| +++.+.+. ....+.+.+..
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~--------D~~~~f~eil~~a~~~~vD~VLiaGD-LFd~~~Ps~~~~~~~~~~lr~ 72 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGD--------DSWNTFEEVLQIAKEQDVDMILLGGD-LFHENKPSRKSLYQVLRSLRL 72 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhh--------hHHHHHHHHHHHHHHcCCCEEEECCc-cCCCCCCCHHHHHHHHHHHHH
Confidence 579999999999985432211100 01345566667777889999999999 66665443 22222233332
Q ss_pred ------------hH---------------------hCCCCEEEEcCCCCCCCC
Q 015684 120 ------------AI---------------------ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 120 ------------~~---------------------~~~iP~~~v~GNHD~~~~ 139 (402)
+. +.++|++++.||||....
T Consensus 73 ~~~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~~ 125 (405)
T TIGR00583 73 YCLGDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPSG 125 (405)
T ss_pred hhccCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCccc
Confidence 00 147999999999998654
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=133.32 Aligned_cols=293 Identities=19% Similarity=0.203 Sum_probs=158.9
Q ss_pred cCCCceEEEEEeccCCcCCC----CCCC------CCC--Cc-------cccc---CC-CChhHHHHHHHHHHh--cCCCE
Q 015684 39 RQNGEFKILQVADMHFANGK----TTPC------LDV--LP-------SQVA---GC-SDLNTTAFINRMISA--EKPDL 93 (402)
Q Consensus 39 ~~~~~~~i~~iSDlH~~~~~----~~~~------~~~--~~-------~~~~---~~-~~~~~~~~l~~~i~~--~~pD~ 93 (402)
.++-.+||+|++|+|.+... ...| ++. .| .-++ .| ....+++.+.+.+++ .++|+
T Consensus 134 ~~~p~~rvlhltDiH~D~~Y~~gs~a~c~~p~ccr~s~~~p~~~~~~Ag~wG~y~~CD~P~~lies~L~~ike~~~~iD~ 213 (577)
T KOG3770|consen 134 KNNPTFRVLHLTDIHLDPDYSEGSDADCDCPMCCRNSDGTPSGTKVAAGPWGDYGKCDSPKRLIESALDHIKENHKDIDY 213 (577)
T ss_pred CCCCceeEEEeeccccCcccccCCcccccCccccccCCCCCCCccccCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCCCE
Confidence 33456999999999998332 1111 111 01 1122 23 445666666666665 24899
Q ss_pred EEEcCCccCCCChhhH----HHHHHHHHhHhHh--CCCCEEEEcCCCCCCCC-------CC-H---HHHHH-HHHhcCCc
Q 015684 94 IVFTGDNIFGFDATDA----AKSLNAAFAPAIA--SNIPWVAVLGNHDQEST-------LS-R---EGVMK-HIVTLKNT 155 (402)
Q Consensus 94 vv~~GDli~~~~~~~~----~~~~~~~l~~~~~--~~iP~~~v~GNHD~~~~-------~~-~---~~~~~-~~~~~~~~ 155 (402)
|++|||++........ .+.+.+..+.+.+ .++|+|...||||.... .. . .-+.+ ....+
T Consensus 214 I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~~wly~~~~~~W--- 290 (577)
T KOG3770|consen 214 IIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQLWLYKHLAGAW--- 290 (577)
T ss_pred EEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhhhhHHHHHHHhhh---
Confidence 9999997766633221 1222222222222 58999999999998531 00 1 00111 11111
Q ss_pred ccccCCCCCcc-ccccccceEEeccCCCCCCCCceeEEEEEEeCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHhhc
Q 015684 156 LSQVNPSDAHI-IDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSV-PGYGWIKPSQQFWFEQTSARLQRAYM 233 (402)
Q Consensus 156 ~~~~~p~~~~~-~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~~~~-~~~g~i~~~q~~Wl~~~l~~l~~~~~ 233 (402)
..+-|.+... +..-+.|...+.+ | ++++.||+..-...+.. .....-...|++||..+|++++.
T Consensus 291 -~~wlp~e~~~t~~kga~Y~~~~~~--G--------lr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~--- 356 (577)
T KOG3770|consen 291 -STWLPAEAKETFLKGAYYLVLVID--G--------LRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAES--- 356 (577)
T ss_pred -hccCCHHHHhhhhcCcEEEEeecC--C--------ceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHh---
Confidence 1222322111 2212445544432 2 88999999643222211 12223456789999999998875
Q ss_pred CCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcC-CeeEEEeccCCCCcccccCCC--
Q 015684 234 SKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRLTG-- 310 (402)
Q Consensus 234 ~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~-~v~~v~~GH~H~~~~~~~~~g-- 310 (402)
++..+-++.|+|+... ...++. ...+...+-+.. -+...|.||.|.+.+...++.
T Consensus 357 -------~GekVhil~HIPpG~~----------~c~~~w-----s~~f~~iv~r~~~tI~gqf~GH~h~d~f~v~yde~~ 414 (577)
T KOG3770|consen 357 -------AGEKVHILGHIPPGDG----------VCLEGW-----SINFYRIVNRFRSTIAGQFYGHTHIDEFRVFYDEET 414 (577)
T ss_pred -------cCCEEEEEEeeCCCCc----------chhhhh-----hHHHHHHHHHHHHhhhhhccccCcceeEEEEecccc
Confidence 7888999999998531 111111 112233332222 467899999999766544422
Q ss_pred -eeEE--ecCCccCCCCCCCCCCcceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecCCC
Q 015684 311 -IQLC--YGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379 (402)
Q Consensus 311 -i~~~--~~~~~g~~~y~~~~~~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~~~ 379 (402)
..+. +.++ +...|.+ -.+|+|+++++... ++ ...++.||.++-....... ++.-|+..+.
T Consensus 415 ~~p~~v~~i~~-svtty~~--~~p~yr~y~~~~~~----~~-~~~d~~ty~~Nlt~an~~~-e~p~W~~~y~ 477 (577)
T KOG3770|consen 415 GHPIAVAYIGP-SVTTYYN--KNPGYRIYAVDSTI----SF-SVPDHRTYFYNLTSANLQP-ESPEWELLYT 477 (577)
T ss_pred CCceeeeeccc-cceehhc--cCCCceecccCccc----ce-ecccceEEEEehhhhcCCC-CCCchHhhhh
Confidence 2221 2211 2223332 36899999998221 11 1567899998765443233 7788888775
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.9e-14 Score=127.83 Aligned_cols=80 Identities=29% Similarity=0.304 Sum_probs=55.2
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
.|||+++||+|++.... ...++.+.+.+++.+||+|+++||++.... ... +.+.+.++.+ .
T Consensus 1 ~~~i~~~sDlH~~~~~~----------------~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~-~~~-~~~~~~l~~l-~ 61 (223)
T cd07385 1 GLRIAHLSDLHLGPFVS----------------RERLERLVEKINALKPDLVVLTGDLVDGSV-DVL-ELLLELLKKL-K 61 (223)
T ss_pred CCEEEEEeecCCCccCC----------------HHHHHHHHHHHhccCCCEEEEcCcccCCcc-hhh-HHHHHHHhcc-C
Confidence 48999999999975431 223455666677789999999999554433 222 3444555543 2
Q ss_pred CCCCEEEEcCCCCCCCCCC
Q 015684 123 SNIPWVAVLGNHDQESTLS 141 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~~~~~ 141 (402)
..+|+++++||||......
T Consensus 62 ~~~~v~~v~GNHD~~~~~~ 80 (223)
T cd07385 62 APLGVYAVLGNHDYYSGDE 80 (223)
T ss_pred CCCCEEEECCCcccccCch
Confidence 4689999999999866543
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-13 Score=131.18 Aligned_cols=86 Identities=20% Similarity=0.297 Sum_probs=57.6
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHH--HHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAA--KSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~--~~~~~~l~~~~ 121 (402)
|||+|+||+|+|....+..+. . .....++.+.+.+.+++||+||++|| +++...+..+ ..+.+++..+.
T Consensus 1 mkilh~SDlHlG~~~~~~~~~------~--~~~~~l~~l~~~i~~~~~D~viIaGD-ifD~~~p~~~a~~~~~~~l~~L~ 71 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRA------A--EHQAFLDWLLEQVQEHQVDAIIVAGD-IFDTGSPPSYARELYNRFVVNLQ 71 (407)
T ss_pred CEEEEEcccCCCCcccCcccH------H--HHHHHHHHHHHHHHhcCCCEEEECCc-cccCCCCcHHHHHHHHHHHHHHH
Confidence 799999999998543211000 0 01123456777777899999999999 5655443322 33455666666
Q ss_pred hCCCCEEEEcCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQES 138 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~ 138 (402)
..++|+++|+||||...
T Consensus 72 ~~~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 72 QTGCQLVVLAGNHDSVA 88 (407)
T ss_pred hcCCcEEEEcCCCCChh
Confidence 67899999999999854
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.6e-13 Score=125.62 Aligned_cols=86 Identities=21% Similarity=0.209 Sum_probs=55.0
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHHH-HHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNA-AFAPA 120 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~-~l~~~ 120 (402)
|||+|+||+|+|...... +... .....++.+.+.+.+++||+|+++||++...... .....+.+ ++..+
T Consensus 1 MKilhiSD~HLG~~~~~~---~~~~-----~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L 72 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDP---WFQN-----YQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLL 72 (340)
T ss_pred CeEEEEeeecCCCcCCCh---hhHH-----HHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 799999999999643211 0000 0123456666667789999999999954432222 22223333 34445
Q ss_pred HhCCCCEEEEcCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQE 137 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~ 137 (402)
.+.++|+++++||||..
T Consensus 73 ~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 73 KEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHCCCeEEEEccCCCcc
Confidence 55789999999999974
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.5e-12 Score=109.62 Aligned_cols=211 Identities=21% Similarity=0.211 Sum_probs=120.4
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccC--CCChhhHHHHHHHHHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIF--GFDATDAAKSLNAAFAP 119 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~--~~~~~~~~~~~~~~l~~ 119 (402)
..||++++||+|-+.. .++.+..++...++|+++++|| ++ ..+......... .+.+
T Consensus 2 ~~mkil~vtDlHg~~~--------------------~~~k~~~~~~~~~~D~lviaGD-lt~~~~~~~~~~~~~~-~~e~ 59 (226)
T COG2129 2 KKMKILAVTDLHGSED--------------------SLKKLLNAAADIRADLLVIAGD-LTYFHFGPKEVAEELN-KLEA 59 (226)
T ss_pred CcceEEEEeccccchH--------------------HHHHHHHHHhhccCCEEEEecc-eehhhcCchHHHHhhh-HHHH
Confidence 3689999999996532 2355666666779999999999 55 444333222211 1455
Q ss_pred hHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCC
Q 015684 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~ 199 (402)
+...++|++++|||=|- .++...+....-. +.+ -...+++ ..+..+--
T Consensus 60 l~~~~~~v~avpGNcD~------~~v~~~l~~~~~~-----------v~~---~v~~i~~-----------~~~~G~Gg- 107 (226)
T COG2129 60 LKELGIPVLAVPGNCDP------PEVIDVLKNAGVN-----------VHG---RVVEIGG-----------YGFVGFGG- 107 (226)
T ss_pred HHhcCCeEEEEcCCCCh------HHHHHHHHhcccc-----------ccc---ceEEecC-----------cEEEEecc-
Confidence 55689999999999775 2233333221110 111 1112221 22222111
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCe-EEEEecChhhhhcccCCCcccccCCcCCCCCCC
Q 015684 200 DYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPG-LVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (402)
Q Consensus 200 ~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~-iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~ 278 (402)
+.......+..+++++ +...++.+-+. ...+. |+.+|.|++..... ...| ....+
T Consensus 108 --sn~tp~nt~~e~~E~~---I~s~l~~~v~~---------~~~~~~Il~~HaPP~gt~~d---~~~g-------~~hvG 163 (226)
T COG2129 108 --SNPTPFNTPREFSEDE---IYSKLKSLVKK---------ADNPVNILLTHAPPYGTLLD---TPSG-------YVHVG 163 (226)
T ss_pred --cCCCCCCCccccCHHH---HHHHHHHHHhc---------ccCcceEEEecCCCCCcccc---CCCC-------ccccc
Confidence 0111111234466665 34443333321 21222 99999998764322 1111 12357
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 279 ~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
+..++.++++.++.+.+|||+|. +.....-|-+++.+|++-. ..+|-+++++
T Consensus 164 S~~vr~~ieefqP~l~i~GHIHE-s~G~d~iG~TivVNPG~~~--------~g~yA~i~l~ 215 (226)
T COG2129 164 SKAVRKLIEEFQPLLGLHGHIHE-SRGIDKIGNTIVVNPGPLG--------EGRYALIELE 215 (226)
T ss_pred hHHHHHHHHHhCCceEEEeeecc-cccccccCCeEEECCCCcc--------CceEEEEEec
Confidence 78899999999999999999998 5555666667777766511 2346677776
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-13 Score=123.61 Aligned_cols=86 Identities=26% Similarity=0.346 Sum_probs=58.7
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh--HHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~~l~~~~ 121 (402)
|||+|+||+|++.......+. . .....++.+.+.+.+++||+|+++|| +++...+. ....+.+.+..+.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~--~------~~~~~l~~l~~~~~~~~~D~lli~GD-i~d~~~p~~~~~~~~~~~l~~l~ 71 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRL--A------EQKAFLDDLLEFAKAEQIDALLVAGD-VFDTANPPAEAQELFNAFFRNLS 71 (253)
T ss_pred CEEEEEhhhcCCCccCCCChH--H------HHHHHHHHHHHHHHHcCCCEEEECCc-cCCCCCCCHHHHHHHHHHHHHHH
Confidence 799999999998654221100 0 01234566667777889999999999 55554433 2334556777666
Q ss_pred hCC-CCEEEEcCCCCCCC
Q 015684 122 ASN-IPWVAVLGNHDQES 138 (402)
Q Consensus 122 ~~~-iP~~~v~GNHD~~~ 138 (402)
+.+ +|+++++||||...
T Consensus 72 ~~~~i~v~~i~GNHD~~~ 89 (253)
T TIGR00619 72 DANPIPIVVISGNHDSAQ 89 (253)
T ss_pred hcCCceEEEEccCCCChh
Confidence 666 99999999999854
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.1e-13 Score=112.97 Aligned_cols=74 Identities=26% Similarity=0.348 Sum_probs=48.0
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHH------------
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAK------------ 111 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~------------ 111 (402)
=||+.+||+|- +.+.+..+..++.+.+||+|+++||++-.....+.|.
T Consensus 6 ~kilA~s~~~g--------------------~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~ 65 (255)
T PF14582_consen 6 RKILAISNFRG--------------------DFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKS 65 (255)
T ss_dssp -EEEEEE--TT---------------------HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----TH
T ss_pred hhheeecCcch--------------------HHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchh
Confidence 38899999993 4567788888898899999999999665554444443
Q ss_pred -----------HHHHHHhHhHhCCCCEEEEcCCCCCC
Q 015684 112 -----------SLNAAFAPAIASNIPWVAVLGNHDQE 137 (402)
Q Consensus 112 -----------~~~~~l~~~~~~~iP~~~v~GNHD~~ 137 (402)
.+.+++..+...++|+++||||||..
T Consensus 66 ~i~~e~~~~~e~~~~ff~~L~~~~~p~~~vPG~~Dap 102 (255)
T PF14582_consen 66 EINEEECYDSEALDKFFRILGELGVPVFVVPGNMDAP 102 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-SEEEEE--TTS-S
T ss_pred hhhhhhhhhHHHHHHHHHHHHhcCCcEEEecCCCCch
Confidence 34466666667899999999999973
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.7e-12 Score=113.69 Aligned_cols=66 Identities=24% Similarity=0.269 Sum_probs=44.3
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
+||+++||+|..... ...+.++..+||+|+++||+. +.. . +.++.+...
T Consensus 1 ~rIa~isDiHg~~~~----------------------~~~~~l~~~~pD~Vl~~GDi~-~~~----~----~~~~~l~~l 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL----------------------EDIKALHLLQPDLVLFVGDFG-NES----V----QLVRAISSL 49 (238)
T ss_pred CEEEEEecCCCCchH----------------------HHHHHHhccCCCEEEECCCCC-cCh----H----HHHHHHHhC
Confidence 589999999953210 112355667999999999954 321 1 233333345
Q ss_pred CCCEEEEcCCCCCCCCC
Q 015684 124 NIPWVAVLGNHDQESTL 140 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~ 140 (402)
..|+++++||||.....
T Consensus 50 ~~p~~~V~GNHD~~~~~ 66 (238)
T cd07397 50 PLPKAVILGNHDAWYDA 66 (238)
T ss_pred CCCeEEEcCCCcccccc
Confidence 68999999999986643
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.7e-13 Score=111.56 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=48.7
Q ss_pred EEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh---HHHHHHHHHhHhHh-
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD---AAKSLNAAFAPAIA- 122 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~---~~~~~~~~l~~~~~- 122 (402)
+++||+|++....... .+ .. ..+....+.+.++++..+||+||++||++ +.+... .+..+...+..+..
T Consensus 1 ~~isD~HL~~~~~~~~---l~-~~--~~~~~~~~~~~~~i~~~~pd~vv~~GDl~-~~~~~~~~~~~~~~~~~~~~~~~~ 73 (156)
T cd08165 1 MFLADTHLLGSILGHW---LD-KL--RREWQMERSFQTSLWLLQPDVVFVLGDLF-DEGKWSTDEEWEDYVERFKKMFGH 73 (156)
T ss_pred CccccchhcCCcccHH---HH-HH--hhhHHHHHHHHHHHHhcCCCEEEECCCCC-CCCccCCHHHHHHHHHHHHHHhcc
Confidence 4689999964332111 00 00 01233445677888889999999999955 443322 22222222222222
Q ss_pred -CCCCEEEEcCCCCC
Q 015684 123 -SNIPWVAVLGNHDQ 136 (402)
Q Consensus 123 -~~iP~~~v~GNHD~ 136 (402)
.++|+++++||||.
T Consensus 74 ~~~~~i~~v~GNHD~ 88 (156)
T cd08165 74 PPDLPLHVVVGNHDI 88 (156)
T ss_pred CCCCeEEEEcCCCCc
Confidence 36899999999997
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.9e-12 Score=108.03 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=51.5
Q ss_pred CCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCC
Q 015684 243 APGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYH 322 (402)
Q Consensus 243 ~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~ 322 (402)
...++++|.+..... .+...+..++...+++++++||.|. ......+++.+++.|+.+..
T Consensus 81 ~~~i~~~H~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~GH~H~-~~~~~~~~~~~~~~Gs~~~~ 140 (156)
T PF12850_consen 81 GFKILLSHGHPYDVQ-------------------WDPAELREILSRENVDLVLHGHTHR-PQVFKIGGIHVINPGSIGGP 140 (156)
T ss_dssp TEEEEEESSTSSSST-------------------TTHHHHHHHHHHTTSSEEEESSSSS-EEEEEETTEEEEEE-GSSS-
T ss_pred CCeEEEECCCCcccc-------------------cChhhhhhhhcccCCCEEEcCCccc-ceEEEECCEEEEECCcCCCC
Confidence 468899998653310 1234455666677899999999999 45556789999988887765
Q ss_pred CCCCCCCCcceEEEEEe
Q 015684 323 AYGKAGWERRARVVVAS 339 (402)
Q Consensus 323 ~y~~~~~~~g~rv~ei~ 339 (402)
..+. ++++-+++++
T Consensus 141 ~~~~---~~~~~i~~~~ 154 (156)
T PF12850_consen 141 RHGD---QSGYAILDIE 154 (156)
T ss_dssp SSSS---SEEEEEEEET
T ss_pred CCCC---CCEEEEEEEe
Confidence 5443 6889888875
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-12 Score=125.94 Aligned_cols=87 Identities=26% Similarity=0.422 Sum_probs=61.2
Q ss_pred eEEEEEeccCCcC-CCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHHHHHhHh
Q 015684 44 FKILQVADMHFAN-GKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFAPA 120 (402)
Q Consensus 44 ~~i~~iSDlH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l~~~ 120 (402)
|||+|+||+|+|. ...... +.. ...+++..+.+.+.++++|+||++|| +++.+.+ .....+.+.+..+
T Consensus 1 mkilHtSD~HLG~~~~~~~~------r~~--d~~~~f~~~l~~a~~~~vD~vliAGD-lFd~~~Ps~~a~~~~~~~l~~l 71 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPS------RLE--DQKKAFDELLEIAKEEKVDFVLIAGD-LFDTNNPSPRALKLFLEALRRL 71 (390)
T ss_pred CeeEEecccccchhhccCcc------chH--HHHHHHHHHHHHHHHccCCEEEEccc-cccCCCCCHHHHHHHHHHHHHh
Confidence 7999999999993 221110 000 12345556666667789999999999 6766544 3445566777777
Q ss_pred HhCCCCEEEEcCCCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~ 139 (402)
...+||+++++||||....
T Consensus 72 ~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 72 KDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred ccCCCcEEEecCCCCchhc
Confidence 6788999999999998654
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.7e-12 Score=114.70 Aligned_cols=77 Identities=25% Similarity=0.334 Sum_probs=51.7
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH--hcCCCEEEEcCCccCC---CC-hhhHHHHHHHHH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS--AEKPDLIVFTGDNIFG---FD-ATDAAKSLNAAF 117 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~--~~~pD~vv~~GDli~~---~~-~~~~~~~~~~~l 117 (402)
||++++||+|++.... ...+.+.+.++ +.+||+|+++||++.. .. .......+.+.+
T Consensus 1 M~i~~iSDlHl~~~~~-----------------~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l 63 (241)
T PRK05340 1 MPTLFISDLHLSPERP-----------------AITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAAL 63 (241)
T ss_pred CcEEEEeecCCCCCCh-----------------hHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHH
Confidence 6899999999985431 11133333332 3689999999995532 11 122344556677
Q ss_pred hHhHhCCCCEEEEcCCCCCC
Q 015684 118 APAIASNIPWVAVLGNHDQE 137 (402)
Q Consensus 118 ~~~~~~~iP~~~v~GNHD~~ 137 (402)
+.+...++|+++++||||..
T Consensus 64 ~~l~~~g~~v~~v~GNHD~~ 83 (241)
T PRK05340 64 KALSDSGVPCYFMHGNRDFL 83 (241)
T ss_pred HHHHHcCCeEEEEeCCCchh
Confidence 77766789999999999973
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-11 Score=104.73 Aligned_cols=55 Identities=18% Similarity=0.263 Sum_probs=37.4
Q ss_pred HHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 281 FFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 281 ~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
.+..+.+..+++++++||+|. ......+++.++..|+.+-...+ . .+++-+++++
T Consensus 97 ~l~~~~~~~~~d~vi~GHtH~-~~~~~~~~~~~iNpGs~~~~~~~--~-~~~~~il~~~ 151 (158)
T TIGR00040 97 VLEYLAKELGVDVLIFGHTHI-PVAEELRGILLINPGSLTGPRNG--N-TPSYAILDVD 151 (158)
T ss_pred HHHHHHhccCCCEEEECCCCC-CccEEECCEEEEECCccccccCC--C-CCeEEEEEec
Confidence 345566666789999999999 45566788888877665522111 1 3577777775
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-11 Score=100.67 Aligned_cols=61 Identities=20% Similarity=0.336 Sum_probs=41.2
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCC
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASN 124 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 124 (402)
||+++||+|.... .++..+||+||++|| +...+....++.+.+.+.. .+
T Consensus 1 ~i~~isD~H~~~~---------------------------~~~~~~~D~vi~~GD-~~~~~~~~~~~~~~~~l~~---~~ 49 (135)
T cd07379 1 RFVCISDTHSRHR---------------------------TISIPDGDVLIHAGD-LTERGTLEELQKFLDWLKS---LP 49 (135)
T ss_pred CEEEEeCCCCCCC---------------------------cCcCCCCCEEEECCC-CCCCCCHHHHHHHHHHHHh---CC
Confidence 5899999995421 123468999999999 5555544444444455543 34
Q ss_pred CC-EEEEcCCCCC
Q 015684 125 IP-WVAVLGNHDQ 136 (402)
Q Consensus 125 iP-~~~v~GNHD~ 136 (402)
.| +++|+||||.
T Consensus 50 ~~~~~~v~GNHD~ 62 (135)
T cd07379 50 HPHKIVIAGNHDL 62 (135)
T ss_pred CCeEEEEECCCCC
Confidence 44 5789999996
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.1e-10 Score=100.22 Aligned_cols=56 Identities=13% Similarity=0.040 Sum_probs=36.5
Q ss_pred HHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCC-C-CCCcceEEEEEe
Q 015684 282 FTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK-A-GWERRARVVVAS 339 (402)
Q Consensus 282 l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~-~-~~~~g~rv~ei~ 339 (402)
+..+.+..+++++++||+|. ......+|+.++..||.+.. ++. . ...+.+-+++++
T Consensus 98 ~~~~~~~~~~dvii~GHTH~-p~~~~~~g~~viNPGSv~~~-~~~~~~~~~~syail~~~ 155 (178)
T cd07394 98 LAALQRQLDVDILISGHTHK-FEAFEHEGKFFINPGSATGA-FSPLDPNVIPSFVLMDIQ 155 (178)
T ss_pred HHHHHHhcCCCEEEECCCCc-ceEEEECCEEEEECCCCCCC-CCCCCCCCCCeEEEEEec
Confidence 44555556789999999999 46667788888888777632 111 1 112456666664
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=112.99 Aligned_cols=81 Identities=33% Similarity=0.399 Sum_probs=56.1
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
..++|+|+||+|+.... .........+..+.||+|+++||+++. ........+.+.++++.
T Consensus 43 ~~~~iv~lSDlH~~~~~------------------~~~~~~~~~i~~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~ 103 (284)
T COG1408 43 QGLKIVQLSDLHSLPFR------------------EEKLALLIAIANELPDLIVLTGDYVDG-DRPPGVAALALFLAKLK 103 (284)
T ss_pred CCeEEEEeehhhhchhh------------------HHHHHHHHHHHhcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhh
Confidence 56889999999987543 111223334456788999999997775 22334455666666653
Q ss_pred hCCCCEEEEcCCCCCCCCCCH
Q 015684 122 ASNIPWVAVLGNHDQESTLSR 142 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~ 142 (402)
...+++++.||||+......
T Consensus 104 -~~~gv~av~GNHd~~~~~~~ 123 (284)
T COG1408 104 -APLGVFAVLGNHDYGVDRSN 123 (284)
T ss_pred -ccCCEEEEeccccccccccc
Confidence 56789999999999766554
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.1e-11 Score=105.88 Aligned_cols=74 Identities=23% Similarity=0.341 Sum_probs=47.8
Q ss_pred EEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCccCC---C-ChhhHHHHHHHHHhHh
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFG---F-DATDAAKSLNAAFAPA 120 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~vv~~GDli~~---~-~~~~~~~~~~~~l~~~ 120 (402)
+++||+|++.... ...+.+.+.+.+ .+||+|+++||++.. . ......+.+.+.++.+
T Consensus 2 ~~iSDlHl~~~~~-----------------~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L 64 (231)
T TIGR01854 2 LFISDLHLSPERP-----------------DITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQV 64 (231)
T ss_pred eEEEecCCCCCCh-----------------hHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHH
Confidence 7999999986421 011223333332 389999999995542 1 1122334555667766
Q ss_pred HhCCCCEEEEcCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQE 137 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~ 137 (402)
.+.++|+++|+||||..
T Consensus 65 ~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 65 SDQGVPCYFMHGNRDFL 81 (231)
T ss_pred HHCCCeEEEEcCCCchh
Confidence 66689999999999974
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-10 Score=97.14 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=36.0
Q ss_pred HHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 285 MVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 285 l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
+.+..+++++++||+|.. .....+++.+++.|+.+.... .-.+++-+++++
T Consensus 97 ~~~~~~~d~vi~GHtH~~-~~~~~~~~~~inpGs~~~~~~---~~~~~~~i~~~~ 147 (155)
T cd00841 97 LAKEGGADVVLYGHTHIP-VIEKIGGVLLLNPGSLSLPRG---GGPPTYAILEID 147 (155)
T ss_pred hhhhcCCCEEEECcccCC-ccEEECCEEEEeCCCccCcCC---CCCCeEEEEEec
Confidence 344556899999999994 555678888888877763221 124678888876
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.6e-11 Score=100.62 Aligned_cols=90 Identities=23% Similarity=0.276 Sum_probs=52.1
Q ss_pred EEEeccCCcCCCCCCCCCCCcccc-cCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHHHHHhHhHh-
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQV-AGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFAPAIA- 122 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l~~~~~- 122 (402)
+.+||+|++.......+.+.-+.. ....+....+.+..+++..+||+||++||++.+.... ..+....+.+..+..
T Consensus 1 llvaDpql~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~ 80 (171)
T cd07384 1 LLVADPQILDETSYPPRPKIALRLTRFYTDAYMRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFL 80 (171)
T ss_pred CcccCccccCCCCCCCCchhhhHHHHHhHHHHHHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcc
Confidence 358999999765322111100000 0112344556677778889999999999955443221 223333333333221
Q ss_pred -----CCCCEEEEcCCCCC
Q 015684 123 -----SNIPWVAVLGNHDQ 136 (402)
Q Consensus 123 -----~~iP~~~v~GNHD~ 136 (402)
.++|+++|+||||.
T Consensus 81 ~~~~~~~~~~~~v~GNHD~ 99 (171)
T cd07384 81 PSNGLEDIPVYYVPGNHDI 99 (171)
T ss_pred cccccCCceEEEECCcccc
Confidence 27899999999998
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.4e-10 Score=100.41 Aligned_cols=71 Identities=20% Similarity=0.201 Sum_probs=46.2
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh----hHHHHHHHHHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT----DAAKSLNAAFAP 119 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~----~~~~~~~~~l~~ 119 (402)
|||+++||+|... ..++.+.+.+++.+||.|+++||++. .+.. ..+. ..+.++.
T Consensus 1 mri~viSD~Hg~~--------------------~~~~~~l~~~~~~~~d~ii~lGDi~~-~~~~~~~~~~~~-~~~~~~~ 58 (182)
T PRK09453 1 MKLMFASDTHGSL--------------------PATEKALELFAQSGADWLVHLGDVLY-HGPRNPLPEGYA-PKKVAEL 58 (182)
T ss_pred CeEEEEEeccCCH--------------------HHHHHHHHHHHhcCCCEEEEcccccc-cCcCCCCccccC-HHHHHHH
Confidence 6999999999421 12355666666789999999999543 3211 1111 1233333
Q ss_pred hHhCCCCEEEEcCCCCC
Q 015684 120 AIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~ 136 (402)
+.+.+.|+++|+||||.
T Consensus 59 l~~~~~~v~~V~GNhD~ 75 (182)
T PRK09453 59 LNAYADKIIAVRGNCDS 75 (182)
T ss_pred HHhcCCceEEEccCCcc
Confidence 33456799999999996
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=100.28 Aligned_cols=86 Identities=16% Similarity=0.170 Sum_probs=49.1
Q ss_pred EEEeccCCcCCCCCCCC-CCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH----
Q 015684 47 LQVADMHFANGKTTPCL-DVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI---- 121 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~---- 121 (402)
+.+||+|+-........ .++ .++ ..+....+....+++..+||+||++||++ +.+.....+.+.+.++.+.
T Consensus 1 llvADPqllg~~~~~~~~~~~-~~~--~~D~yl~r~~~~a~~~l~PD~Vi~lGDL~-D~G~~~~~~e~~e~l~Rf~~If~ 76 (195)
T cd08166 1 LLVADPQILGYQNENFGLGWI-ARW--DSDRYLKKTYHLALNFVQPDIVIFLGDLM-DEGSIANDDEYYSYVQRFINIFE 76 (195)
T ss_pred CcccCccccCCCCCCccccHH-HHH--HHHHHHHHHHHHHHhccCCCEEEEecccc-CCCCCCCHHHHHHHHHHHHHHhc
Confidence 35789998754321100 000 000 02333445556667778999999999954 4443322222333333322
Q ss_pred -hCCCCEEEEcCCCCC
Q 015684 122 -ASNIPWVAVLGNHDQ 136 (402)
Q Consensus 122 -~~~iP~~~v~GNHD~ 136 (402)
..++|++++|||||.
T Consensus 77 ~~~~~~~~~VpGNHDI 92 (195)
T cd08166 77 VPNGTKIIYLPGDNDI 92 (195)
T ss_pred CCCCCcEEEECCCCCc
Confidence 257899999999998
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.9e-10 Score=100.41 Aligned_cols=216 Identities=16% Similarity=0.151 Sum_probs=105.7
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
++|+|++|+| ..... .... ......+..+.+.+++++|| +++.+||++.+.. ...+..-...++.+..
T Consensus 1 ~~il~~nd~~-~~~~~-~~~~--------~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l~~ 69 (257)
T cd07406 1 FTILHFNDVY-EIAPL-DGGP--------VGGAARFATLRKQLRKENPNTLVLFSGDVLSPSL-LSTATKGKQMVPVLNA 69 (257)
T ss_pred CeEEEEccce-eeccc-CCCC--------cCCHHHHHHHHHHHHhcCCCEEEEECCCccCCcc-chhhcCCccHHHHHHh
Confidence 5899999999 22111 0000 12333344455555556788 9999999654432 1111111122232323
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccC---CCCCccccccccc-eEEeccCCCCCCCCceeEEEEEEeC
Q 015684 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN---PSDAHIIDGFGNY-NLEIGGVKGSGFENKSVLNLYFLDS 198 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~g~~~y-~~~~~~~~~~~~~~~~~~~l~~lDs 198 (402)
.+. -+.++||||+... .+.+.+.+....+.+-.-+ .........+.-| .+++.+ ..+.++.+.+
T Consensus 70 l~~-d~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g---------~kIgviG~~~ 137 (257)
T cd07406 70 LGV-DLACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAG---------VKIGLLGLVE 137 (257)
T ss_pred cCC-cEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECC---------eEEEEEEEec
Confidence 444 3668999998543 4455555544332211100 0000111111122 233333 2255666665
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCC
Q 015684 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (402)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~ 278 (402)
............+..-.+-.+.+++.++++++. ....+|+++|.+..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~---------~~D~iVvl~H~g~~~d---------------------- 186 (257)
T cd07406 138 EEWLETLTIDPEYVRYRDYVETARELVDELREQ---------GADLIIALTHMRLPND---------------------- 186 (257)
T ss_pred ccccccccCCCCcceEcCHHHHHHHHHHHHHhC---------CCCEEEEEeccCchhh----------------------
Confidence 322110001111221123344466666555542 4566888888876431
Q ss_pred hHHHHHHHH-cCCeeEEEeccCCCCcccccCCCeeEEecCC
Q 015684 279 SGFFTTMVA-AGDVKAVFTGHDHVNDFCGRLTGIQLCYGGG 318 (402)
Q Consensus 279 ~~~l~~l~~-~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~ 318 (402)
..+.+ -.+++++++||.|. ......+++.+..++.
T Consensus 187 ----~~la~~~~~iD~IlgGH~H~-~~~~~~~~t~vv~~g~ 222 (257)
T cd07406 187 ----KRLAREVPEIDLILGGHDHE-YILVQVGGTPIVKSGS 222 (257)
T ss_pred ----HHHHHhCCCCceEEecccce-eEeeeECCEEEEeCCc
Confidence 11222 25799999999998 4555667777666543
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-11 Score=106.75 Aligned_cols=72 Identities=22% Similarity=0.354 Sum_probs=50.6
Q ss_pred EEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC--CEEEEcCCccCCC-----ChhhHHHHHHHHHhH
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP--DLIVFTGDNIFGF-----DATDAAKSLNAAFAP 119 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p--D~vv~~GDli~~~-----~~~~~~~~~~~~l~~ 119 (402)
++|||+|+++..+ ...+.+.+.++...+ |.+.+.|| +++. ..++..+...+.+..
T Consensus 1 lFISDlHL~~~~p-----------------~~t~~fl~Fl~~~a~~ad~lyilGD-ifd~w~g~~~~~~~~~~V~~~l~~ 62 (237)
T COG2908 1 LFISDLHLGPKRP-----------------ALTAFFLDFLREEAAQADALYILGD-IFDGWIGDDEPPQLHRQVAQKLLR 62 (237)
T ss_pred CeeeccccCCCCc-----------------HHHHHHHHHHHhccccCcEEEEech-hhhhhhcCCcccHHHHHHHHHHHH
Confidence 4799999996542 122556666666555 99999999 4443 123444555566666
Q ss_pred hHhCCCCEEEEcCCCCC
Q 015684 120 AIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~ 136 (402)
+.+.|.|+|+++||||+
T Consensus 63 ~a~~G~~v~~i~GN~Df 79 (237)
T COG2908 63 LARKGTRVYYIHGNHDF 79 (237)
T ss_pred HHhcCCeEEEecCchHH
Confidence 66789999999999996
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=6e-10 Score=91.47 Aligned_cols=85 Identities=24% Similarity=0.320 Sum_probs=46.8
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCccCCC-ChhhHHHHHHHHHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGF-DATDAAKSLNAAFAPA 120 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~vv~~GDli~~~-~~~~~~~~~~~~l~~~ 120 (402)
|+|..+||+|+..+..... +.+...|..+. +.+.+--.. ..-|.|++.|| |.-. .-++....+ +.+.
T Consensus 1 M~iyaiaDLHLa~~~pKpM-~vFGe~W~gh~-----ekI~k~W~~~v~~eDiVllpGD-iSWaM~l~ea~~Dl-~~i~-- 70 (230)
T COG1768 1 MRIYAIADLHLALGVPKPM-EVFGEPWSGHH-----EKIKKHWRSKVSPEDIVLLPGD-ISWAMRLEEAEEDL-RFIG-- 70 (230)
T ss_pred CceeeeehhhHhhCCCCce-eecCCcccCch-----HHHHHHHHhcCChhhEEEeccc-chhheechhhhhhh-hhhh--
Confidence 6788999999997764321 12222222221 223332221 24499999999 5433 222222222 2333
Q ss_pred HhCCCCEEEEcCCCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~ 139 (402)
...---+.+.||||++..
T Consensus 71 -~LPG~K~m~rGNHDYWw~ 88 (230)
T COG1768 71 -DLPGTKYMIRGNHDYWWS 88 (230)
T ss_pred -cCCCcEEEEecCCccccc
Confidence 334447889999999876
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.18 E-value=3e-10 Score=92.01 Aligned_cols=69 Identities=26% Similarity=0.291 Sum_probs=44.8
Q ss_pred EEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCC
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIP 126 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP 126 (402)
+++||+|.+..... . ........+.+||+||++||++.... ...+..+.. +......++|
T Consensus 1 ~~~gD~h~~~~~~~----------------~--~~~~~~~~~~~~~~vi~~GD~~~~~~-~~~~~~~~~-~~~~~~~~~~ 60 (131)
T cd00838 1 AVISDIHGNLEALE----------------A--VLEAALAAAEKPDFVLVLGDLVGDGP-DPEEVLAAA-LALLLLLGIP 60 (131)
T ss_pred CeeecccCCccchH----------------H--HHHHHHhcccCCCEEEECCcccCCCC-CchHHHHHH-HHHhhcCCCC
Confidence 47899999865321 0 01124445689999999999555443 333333322 3334457999
Q ss_pred EEEEcCCCC
Q 015684 127 WVAVLGNHD 135 (402)
Q Consensus 127 ~~~v~GNHD 135 (402)
+++++||||
T Consensus 61 ~~~~~GNHD 69 (131)
T cd00838 61 VYVVPGNHD 69 (131)
T ss_pred EEEeCCCce
Confidence 999999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.6e-10 Score=90.75 Aligned_cols=37 Identities=35% Similarity=0.440 Sum_probs=25.4
Q ss_pred hcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCC
Q 015684 88 AEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135 (402)
Q Consensus 88 ~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD 135 (402)
..++|+++++|| +.. +.. ..+..+ .+.|+++|+||||
T Consensus 20 ~~~~d~ii~~GD-~~~----~~~----~~~~~~--~~~~~~~V~GN~D 56 (129)
T cd07403 20 LEGVDLILSAGD-LPK----EYL----EYLVTM--LNVPVYYVHGNHD 56 (129)
T ss_pred CCCCCEEEECCC-CCh----HHH----HHHHHH--cCCCEEEEeCCCc
Confidence 578999999999 421 111 222222 3678999999999
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.5e-09 Score=96.78 Aligned_cols=231 Identities=19% Similarity=0.163 Sum_probs=106.7
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCccCCCChhhHHH------HHHHH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAAK------SLNAA 116 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~-~GDli~~~~~~~~~~------~~~~~ 116 (402)
++|++++|+|-.-.+. .+.. ...........+..+.+.+++++||.+++ +||++.+... ..+. .-...
T Consensus 1 l~il~t~D~Hg~~~~~-~~~~---~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~ 75 (277)
T cd07410 1 LRILATSDLHGNLLPY-DYYT---DKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPM 75 (277)
T ss_pred CeEEEEeccccceeCc-cccC---CCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChH
Confidence 5899999999432211 1110 00000122333344555555678998887 9996554321 1111 01123
Q ss_pred HhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCc-cccccccc-eEEec-cCCCCCCCCceeEEE
Q 015684 117 FAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAH-IIDGFGNY-NLEIG-GVKGSGFENKSVLNL 193 (402)
Q Consensus 117 l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~g~~~y-~~~~~-~~~~~~~~~~~~~~l 193 (402)
++.+...+.. ++++||||+... .+.+.+.+......+-..+-.... .......| .+.+. + ..+.+
T Consensus 76 ~~~ln~~g~d-~~~lGNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g---------~kVgv 143 (277)
T cd07410 76 IAAMNALGYD-AGTLGNHEFNYG--LDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVG---------VKVGI 143 (277)
T ss_pred HHHHHhcCCC-EEeecccCcccC--HHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCC---------CEEEE
Confidence 3333345654 667799998543 345555554433221100000000 00001123 23333 3 12445
Q ss_pred EEEeCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCc
Q 015684 194 YFLDSGDYSTV--PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEG 271 (402)
Q Consensus 194 ~~lDs~~~~~~--~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~ 271 (402)
+.+-+...... +.. ..+.--.+-.+.+++.++++++. ....+|+++|.+.......
T Consensus 144 iG~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~v~~lr~~---------~~D~IIvl~H~g~~~~~~~------------ 201 (277)
T cd07410 144 IGLTTPQIPNWEKPNL-IGGLKFTDPVETAKKYVPKLRAE---------GADVVVVLAHGGFERDLEE------------ 201 (277)
T ss_pred EecCCcccccccCccc-CCCcEEcCHHHHHHHHHHHHHHc---------CCCEEEEEecCCcCCCccc------------
Confidence 55443211110 110 01111112233466666666542 4567999999977431100
Q ss_pred CCCCCCChHHHHHHHHc-CCeeEEEeccCCCCcccc-cCCCeeEEecC
Q 015684 272 ISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCG-RLTGIQLCYGG 317 (402)
Q Consensus 272 ~~~~~~~~~~l~~l~~~-~~v~~v~~GH~H~~~~~~-~~~gi~~~~~~ 317 (402)
. .........|.+. .+|+++++||.|.. ... ..+++.++-++
T Consensus 202 --~-~~~~~~~~~la~~~~~vD~IlgGHsH~~-~~~~~~~~~~v~q~g 245 (277)
T cd07410 202 --S-LTGENAAYELAEEVPGIDAILTGHQHRR-FPGPTVNGVPVVQPG 245 (277)
T ss_pred --c-cCCccHHHHHHhcCCCCcEEEeCCCccc-cccCCcCCEEEEcCC
Confidence 0 0011223455555 68999999999984 444 45666665443
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.4e-10 Score=99.18 Aligned_cols=77 Identities=22% Similarity=0.222 Sum_probs=43.8
Q ss_pred EEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCC-----ChhhHHHHHHHHHhHhH
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF-----DATDAAKSLNAAFAPAI 121 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~-----~~~~~~~~~~~~l~~~~ 121 (402)
++|||+|++..... .......+.......+||.||++||++... .....+......+....
T Consensus 1 ~~iSDlHlg~~~~~--------------~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~ 66 (217)
T cd07398 1 LFISDLHLGDGGPA--------------ADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA 66 (217)
T ss_pred CEeeeecCCCCCCC--------------HHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH
Confidence 47999999976431 111112221111135999999999955321 11122222212233334
Q ss_pred hCCCCEEEEcCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQE 137 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~ 137 (402)
..++++++++||||..
T Consensus 67 ~~~~~v~~v~GNHD~~ 82 (217)
T cd07398 67 DRGTRVYYVPGNHDFL 82 (217)
T ss_pred HCCCeEEEECCCchHH
Confidence 5789999999999983
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.3e-08 Score=91.33 Aligned_cols=95 Identities=19% Similarity=0.187 Sum_probs=51.1
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
++|+++||+| +.-.. +.. ......+..+.+.+++..|| +++.+||++.+..... .......++.+..
T Consensus 1 l~i~~~sD~h-g~~~~--~~~--------~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~ 68 (252)
T cd00845 1 LTILHTNDLH-GHFEP--AGG--------VGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST-ATKGEANIELMNA 68 (252)
T ss_pred CEEEEecccc-cCccc--cCC--------cCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHh
Confidence 5899999999 33211 100 01233334455555667788 7899999766543221 1111222232323
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
.+. .++++||||+... .+.+.+.+....
T Consensus 69 ~g~-d~~~~GNHe~d~g--~~~l~~~~~~~~ 96 (252)
T cd00845 69 LGY-DAVTIGNHEFDYG--LDALAELYKDAN 96 (252)
T ss_pred cCC-CEEeecccccccc--HHHHHHHHHhCC
Confidence 443 5577899998543 334555554443
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=2e-07 Score=85.59 Aligned_cols=225 Identities=17% Similarity=0.136 Sum_probs=103.8
Q ss_pred eEEEEEeccCCcCCCCCCC-CCC-CcccccCCCChhHHHHHHHHHHhc-CCCEEE-EcCCccCCCChhhHHHHHHHHHhH
Q 015684 44 FKILQVADMHFANGKTTPC-LDV-LPSQVAGCSDLNTTAFINRMISAE-KPDLIV-FTGDNIFGFDATDAAKSLNAAFAP 119 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~~i~~~-~pD~vv-~~GDli~~~~~~~~~~~~~~~l~~ 119 (402)
++|++++|+|-.-.+.... ... .+...........+..+.+.+++. .||.++ .+||++.+... ..+..-...+..
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ 79 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVDA 79 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHHH
Confidence 4799999999764331100 000 000001112333344455555556 899874 59996654422 111111223333
Q ss_pred hHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCC--CCCccccccccceE-EeccCCCCCCCCceeEEEEEE
Q 015684 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP--SDAHIIDGFGNYNL-EIGGVKGSGFENKSVLNLYFL 196 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~g~~~y~~-~~~~~~~~~~~~~~~~~l~~l 196 (402)
+.. +++.++.||||+... .+.+.+.+....+.+-.-+- .... ......|.+ ...+ ..+.++.+
T Consensus 80 l~~--~g~da~~GNHefd~g--~~~l~~~~~~~~~~~l~aN~~~~~~~-~~~~~~~~i~~~~g---------~kVgviG~ 145 (264)
T cd07411 80 LNA--LGVDAMVGHWEFTYG--PERVRELFGRLNWPFLAANVYDDEAG-ERVFPPYRIKEVGG---------VKIGVIGQ 145 (264)
T ss_pred HHh--hCCeEEecccccccC--HHHHHHHHhhCCCCEEEEEEEeCCCC-CcccCCEEEEEECC---------EEEEEEEe
Confidence 323 344444499998644 34455555444332111000 0000 000112333 3333 22566777
Q ss_pred eCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCC
Q 015684 197 DSGDYSTV-PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSA 275 (402)
Q Consensus 197 Ds~~~~~~-~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~ 275 (402)
.+...... +.....++.-....+.+++.+.++++. .....+|+++|.+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~D~iI~l~H~g~~~~------------------- 198 (264)
T cd07411 146 TFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRRE--------EGVDVVVLLSHNGLPVD------------------- 198 (264)
T ss_pred ccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHh--------CCCCEEEEEecCCchhh-------------------
Confidence 65321110 100011222223455566665555432 25567888888876321
Q ss_pred CCChHHHHHHH-HcCCeeEEEeccCCCCccc--ccCCCeeEEecC
Q 015684 276 SVNSGFFTTMV-AAGDVKAVFTGHDHVNDFC--GRLTGIQLCYGG 317 (402)
Q Consensus 276 ~~~~~~l~~l~-~~~~v~~v~~GH~H~~~~~--~~~~gi~~~~~~ 317 (402)
..+. +..+|+++++||.|..... ...+++.+..++
T Consensus 199 -------~~la~~~~~iDlilgGH~H~~~~~~~~~~~~t~v~~~g 236 (264)
T cd07411 199 -------VELAERVPGIDVILSGHTHERTPKPIIAGGGTLVVEAG 236 (264)
T ss_pred -------HHHHhcCCCCcEEEeCcccccccCcccccCCEEEEEcC
Confidence 1222 2257999999999973221 124666666554
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.1e-07 Score=85.36 Aligned_cols=78 Identities=19% Similarity=0.139 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHc--CCeeEE
Q 015684 217 QQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAA--GDVKAV 294 (402)
Q Consensus 217 q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~--~~v~~v 294 (402)
..+-+++.++++++. ....+|+++|.......... . .+. .......++.. .+++++
T Consensus 176 ~~e~~~~~v~~lr~~---------~~D~IIvL~H~G~~~~~~~~------~-~~~------~~~~~~~l~~~~~~~iD~I 233 (288)
T cd07412 176 EVEAINAVAPELKAG---------GVDAIVVLAHEGGSTKGGDD------T-CSA------ASGPIADIVNRLDPDVDVV 233 (288)
T ss_pred HHHHHHHHHHHHHHC---------CCCEEEEEeCCCCCCCCCCc------c-ccc------cChhHHHHHhhcCCCCCEE
Confidence 345577777777642 45678889998764311100 0 000 01112333333 479999
Q ss_pred EeccCCCCcccc---cCCCeeEEecC
Q 015684 295 FTGHDHVNDFCG---RLTGIQLCYGG 317 (402)
Q Consensus 295 ~~GH~H~~~~~~---~~~gi~~~~~~ 317 (402)
++||.|.. ... ..+++.++-++
T Consensus 234 lgGHsH~~-~~~~~~~~~~~~v~q~g 258 (288)
T cd07412 234 FAGHTHQA-YNCTVPAGNPRLVTQAG 258 (288)
T ss_pred EeCccCcc-ccccccCcCCEEEEecC
Confidence 99999984 333 45677766554
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.4e-08 Score=98.21 Aligned_cols=61 Identities=13% Similarity=0.170 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHc---CCeeE
Q 015684 217 QQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAA---GDVKA 293 (402)
Q Consensus 217 q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~---~~v~~ 293 (402)
..+-+++..++++++ ....-+|+++|..+...... + +.. .+. ..|.++ .+|++
T Consensus 193 ~~e~a~~~v~~Lk~~--------~~~D~IV~LsH~G~~~~~~~------~---~~~----~~d---~~la~~~~~~~IDv 248 (551)
T PRK09558 193 PAEEAKKVIPELKQT--------EKPDVIIALTHMGHYDDGEH------G---SNA----PGD---VEMARSLPAGGLDM 248 (551)
T ss_pred HHHHHHHHHHHHHhc--------cCCCEEEEEeccccccCCcc------C---CCC----ccH---HHHHHhCCccCceE
Confidence 344466777777642 25667899999877331100 0 000 011 223322 27999
Q ss_pred EEeccCCC
Q 015684 294 VFTGHDHV 301 (402)
Q Consensus 294 v~~GH~H~ 301 (402)
++.||.|.
T Consensus 249 IlgGHsH~ 256 (551)
T PRK09558 249 IVGGHSQD 256 (551)
T ss_pred EEeCCCCc
Confidence 99999997
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.5e-07 Score=86.07 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=49.8
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
++|++++|+|-.-.... . .......+..+.+.++++++++++.+||.+.+... .....-...++.+...
T Consensus 1 i~il~~~D~H~~~~~~~---~-------~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~ 69 (257)
T cd07408 1 ITILHTNDIHGRIDEDD---N-------NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAV 69 (257)
T ss_pred CEEEEeccCcccccCCC---C-------ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhc
Confidence 58999999995432210 0 00122222333333343467899999996654321 1111111233333345
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhc
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTL 152 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~ 152 (402)
+..+ .++||||+... .+.+.+.....
T Consensus 70 g~d~-~~~GNHefd~G--~~~l~~~~~~~ 95 (257)
T cd07408 70 GYDA-VTPGNHEFDYG--LDRLKELSKEA 95 (257)
T ss_pred CCcE-EccccccccCC--HHHHHHHHhhC
Confidence 6666 56799998643 34555555443
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.2e-08 Score=81.62 Aligned_cols=56 Identities=14% Similarity=0.217 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
..++.+.+..+.++++.||+|.. ...+.+|+.++..|+.+ +..+. ..+++=+++++
T Consensus 99 ~~l~~la~~~~~Dvli~GHTH~p-~~~~~~~i~~vNPGS~s-~pr~~--~~~sy~il~~~ 154 (172)
T COG0622 99 SLLEYLAKELGADVLIFGHTHKP-VAEKVGGILLVNPGSVS-GPRGG--NPASYAILDVD 154 (172)
T ss_pred HHHHHHHHhcCCCEEEECCCCcc-cEEEECCEEEEcCCCcC-CCCCC--CCcEEEEEEcC
Confidence 45677778888999999999994 44466777666555443 22221 34466677665
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.4e-08 Score=93.02 Aligned_cols=92 Identities=24% Similarity=0.388 Sum_probs=61.5
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh---HHHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD---AAKSLNAAF 117 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~---~~~~~~~~l 117 (402)
++.+||++.||.|+|.+.....+.. ....+++.+.....+.++|+|++.|| ++..+.+. .++.+ +.|
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~--------DSf~tFeEIl~iA~e~~VDmiLlGGD-LFHeNkPSr~~L~~~i-~lL 80 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGD--------DSFVTFEEILEIAQENDVDMILLGGD-LFHENKPSRKTLHRCL-ELL 80 (646)
T ss_pred ccceEEEEeecCccccccCCccccc--------chHHHHHHHHHHHHhcCCcEEEecCc-ccccCCccHHHHHHHH-HHH
Confidence 5789999999999997764332110 13456777788888899999999999 55554332 12211 111
Q ss_pred ---------------------------------hHhHhCCCCEEEEcCCCCCCCCCCH
Q 015684 118 ---------------------------------APAIASNIPWVAVLGNHDQESTLSR 142 (402)
Q Consensus 118 ---------------------------------~~~~~~~iP~~~v~GNHD~~~~~~~ 142 (402)
.+-..-.|||+.+-||||...+.++
T Consensus 81 RryClgdkP~~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDpSG~~~ 138 (646)
T KOG2310|consen 81 RRYCLGDKPVQLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDPSGDGR 138 (646)
T ss_pred HHHccCCCceeeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCCccccc
Confidence 1111246899999999999776553
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.5e-09 Score=89.51 Aligned_cols=85 Identities=24% Similarity=0.395 Sum_probs=52.1
Q ss_pred EEEeccCCcCCCCCCC-CCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHH-HhHhHhCC
Q 015684 47 LQVADMHFANGKTTPC-LDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAA-FAPAIASN 124 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~-l~~~~~~~ 124 (402)
+++||+|+|....... ....|.. ...++++.+.+.+++.+||.||++||++.+..... ....... +......+
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~----~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~-~~~~~~~~~~~~~~~~ 75 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRG----QTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLS-RQEFEEVAFLRLLAKD 75 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcc----cHHHHHHHHHHHHHhcCCCEEEEeCcccccccccC-HHHHHHHHHHHhccCC
Confidence 4799999996542100 1111111 22356778888888899999999999664433221 1111111 22333468
Q ss_pred CCEEEEcCCCCC
Q 015684 125 IPWVAVLGNHDQ 136 (402)
Q Consensus 125 iP~~~v~GNHD~ 136 (402)
+|+++++||||.
T Consensus 76 ~~v~~i~GNHD~ 87 (172)
T cd07391 76 VDVILIRGNHDG 87 (172)
T ss_pred CeEEEEcccCcc
Confidence 899999999997
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.4e-07 Score=91.71 Aligned_cols=75 Identities=16% Similarity=0.221 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEec
Q 015684 218 QFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTG 297 (402)
Q Consensus 218 ~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~G 297 (402)
++=+++.+.++++. ....+|+++|..+..... ... ..++. ..+.+-.+|++|+.|
T Consensus 230 veaa~~~v~~Lr~~---------GaDvIIaLsH~G~~~d~~----------~~~----~ena~--~~l~~v~gID~IlgG 284 (780)
T PRK09418 230 VETAKKMVPKMKAE---------GADVIVALAHSGVDKSGY----------NVG----MENAS--YYLTEVPGVDAVLMG 284 (780)
T ss_pred HHHHHHHHHHHHhc---------CCCEEEEEeccCcccccc----------ccc----chhhh--HHHhcCCCCCEEEEC
Confidence 34466666667642 456789999987743100 000 01221 113334689999999
Q ss_pred cCCCCcccccCCCeeEEecCC
Q 015684 298 HDHVNDFCGRLTGIQLCYGGG 318 (402)
Q Consensus 298 H~H~~~~~~~~~gi~~~~~~~ 318 (402)
|.|. .+....+|+.++.++.
T Consensus 285 HsH~-~~~~~ingv~vvqaG~ 304 (780)
T PRK09418 285 HSHT-EVKDVFNGVPVVMPGV 304 (780)
T ss_pred CCCC-cccccCCCEEEEEcCh
Confidence 9999 5666678887776543
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.2e-06 Score=79.43 Aligned_cols=210 Identities=19% Similarity=0.184 Sum_probs=96.5
Q ss_pred eEEEEEeccCCcCCCCCCCCCC-CcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDV-LPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
++|++++|+|-.-......... .............+..+.+.++++.++ +++-+||.+.+..... ...-...++.+.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~-~~~g~~~~~~ln 79 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYT-LYKGNADAEFMN 79 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhh-hcCChHHHHHHH
Confidence 5799999999653221100000 000000011222233334444445777 4555999665432111 111112222233
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcc--cccCCCCC--ccccccccce-EEeccCCCCCCCCceeEEEEEE
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL--SQVNPSDA--HIIDGFGNYN-LEIGGVKGSGFENKSVLNLYFL 196 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~--~~~~g~~~y~-~~~~~~~~~~~~~~~~~~l~~l 196 (402)
..+..+. ++||||+.... +.+.+.+....+.. ..+..... ........|. +.+.+ ..+.++.+
T Consensus 80 ~~g~D~~-~lGNHefd~G~--~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G---------~kIgviG~ 147 (281)
T cd07409 80 LLGYDAM-TLGNHEFDDGV--EGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGG---------EKIGIIGY 147 (281)
T ss_pred hcCCCEE-EeccccccCCH--HHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECC---------EEEEEEEE
Confidence 4566654 56999996543 34445444333211 11111110 0001111232 23333 22556666
Q ss_pred eCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCC
Q 015684 197 DSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSAS 276 (402)
Q Consensus 197 Ds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~ 276 (402)
-+........ +..+.--.+..+.+++.++++++. ....+|+++|......
T Consensus 148 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~v~~lr~~---------~~D~II~l~H~G~~~d-------------------- 197 (281)
T cd07409 148 TTPDTTELSS-PGGKVKFLDEIEAAQKEADKLKAQ---------GVNKIIALSHSGYEVD-------------------- 197 (281)
T ss_pred ecCccccccc-CCCceEECCHHHHHHHHHHHHHhc---------CCCEEEEEeccCchhH--------------------
Confidence 5532111111 011222223456688887777752 4567888889876321
Q ss_pred CChHHHHHHHHc-CCeeEEEeccCCCC
Q 015684 277 VNSGFFTTMVAA-GDVKAVFTGHDHVN 302 (402)
Q Consensus 277 ~~~~~l~~l~~~-~~v~~v~~GH~H~~ 302 (402)
..|.++ .+++++++||.|..
T Consensus 198 ------~~la~~~~giD~IiggH~H~~ 218 (281)
T cd07409 198 ------KEIARKVPGVDVIVGGHSHTF 218 (281)
T ss_pred ------HHHHHcCCCCcEEEeCCcCcc
Confidence 122222 57999999999984
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.6e-07 Score=97.80 Aligned_cols=225 Identities=15% Similarity=0.096 Sum_probs=99.2
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCccCCCChhhHH---HH-----
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAA---KS----- 112 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~-~GDli~~~~~~~~~---~~----- 112 (402)
..++|++++|+|-.-.......+. + ........+..+.+.++++.|+.+++ +||++.+....+.. ..
T Consensus 40 ~~l~il~tnD~Hg~l~~~~y~~~~-~---~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~ 115 (1163)
T PRK09419 40 VNIQILATTDLHGNFMDYDYASDK-E---TTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNK 115 (1163)
T ss_pred eEEEEEEEecccccccccccccCC-C---CCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCC
Confidence 469999999999763321111000 0 00012222333444445567776665 99966654211100 00
Q ss_pred HHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcc--cccCCCCCccccccccceEE-e--ccCCCCCCCC
Q 015684 113 LNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL--SQVNPSDAHIIDGFGNYNLE-I--GGVKGSGFEN 187 (402)
Q Consensus 113 ~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~g~~~y~~~-~--~~~~~~~~~~ 187 (402)
-...+..+...+.- ++++||||+..+ .+.+.+.+....+.+ ..+...... ..+..|.+. . ...+|. ..
T Consensus 116 ~~~~i~~mN~lgyD-a~~lGNHEFd~G--~~~L~~~~~~a~fp~l~aNv~~~~~~--~~~~py~I~~~~~~~~~g~--~~ 188 (1163)
T PRK09419 116 THPMIKAMNALGYD-AGTLGNHEFNYG--LDFLDGTIKGANFPVLNANVKYKNGK--NVYTPYKIKEKTVTDENGK--KQ 188 (1163)
T ss_pred cCHHHHHHhhcCcc-EEeecccccccC--HHHHHHHHhcCCCCEEEeeeecCCCC--cccCCEEEEEEEeeccCCC--CC
Confidence 00122222223443 567999999654 345555554433221 111111100 011123332 1 111110 01
Q ss_pred ceeEEEEEEeCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCccc
Q 015684 188 KSVLNLYFLDSGDYSTVPSVPGYG-WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTG 266 (402)
Q Consensus 188 ~~~~~l~~lDs~~~~~~~~~~~~g-~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G 266 (402)
...+.++.+-+............| ..-.+..+=+++.+.++++. ...-+|+++|..+....... |
T Consensus 189 gvkIgiiG~~~p~~~~~~~~~~~g~~~~~d~v~~~~~~v~~lk~~---------gaDvII~l~H~G~~~~~~~~-----~ 254 (1163)
T PRK09419 189 GVKVGYIGFVPPQIMTWDKKNLKGKVEVKNIVEEANKTIPEMKKG---------GADVIVALAHSGIESEYQSS-----G 254 (1163)
T ss_pred CeEEEEEecCCcchhhcchhhccCcEEECCHHHHHHHHHHHHHhc---------CCCEEEEEeccCcCCCCCCC-----C
Confidence 122455666442110000000011 11122233366666666542 55678999998874311000 0
Q ss_pred ccCCcCCCCCCChHHHHHHH-HcCCeeEEEeccCCCC
Q 015684 267 VRQEGISSASVNSGFFTTMV-AAGDVKAVFTGHDHVN 302 (402)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~l~-~~~~v~~v~~GH~H~~ 302 (402)
.......|. +-.+|++++.||.|..
T Consensus 255 -----------~en~~~~la~~~~gID~Il~GHsH~~ 280 (1163)
T PRK09419 255 -----------AEDSVYDLAEKTKGIDAIVAGHQHGL 280 (1163)
T ss_pred -----------cchHHHHHHHhCCCCcEEEeCCCccc
Confidence 111223455 3368999999999983
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=98.72 E-value=4.3e-07 Score=90.13 Aligned_cols=216 Identities=14% Similarity=0.271 Sum_probs=85.3
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCCh---------------
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--------------- 106 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~--------------- 106 (402)
..+||++.|+-++..+. ...+..+++..+|||+|++||.|+.+..
T Consensus 104 ~~~r~a~~SC~~~~~~~--------------------~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~ 163 (453)
T PF09423_consen 104 DPFRFAFGSCQNYEDGY--------------------FPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAP 163 (453)
T ss_dssp --EEEEEE----CCC-----------------------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S----
T ss_pred CceEEEEECCCCcccCh--------------------HHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccccccc
Confidence 35999999999875332 1334455444799999999999999852
Q ss_pred -----h---hHHHH-HH-----HHHhHhHhCCCCEEEEcCCCCCCCCCCH----------HHHHH-HHHhcCCcccccCC
Q 015684 107 -----T---DAAKS-LN-----AAFAPAIASNIPWVAVLGNHDQESTLSR----------EGVMK-HIVTLKNTLSQVNP 161 (402)
Q Consensus 107 -----~---~~~~~-~~-----~~l~~~~~~~iP~~~v~GNHD~~~~~~~----------~~~~~-~~~~~~~~~~~~~p 161 (402)
. +.|+. +. ..++.+. ..+|+++++=.||+.++... ..... ........ ..+.|
T Consensus 164 ~p~~~~~~l~~yR~~y~~~~~~p~l~~~~-~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay-~e~~p 241 (453)
T PF09423_consen 164 EPAHEAETLDDYRRRYRQYRSDPDLRRLH-ANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAY-FEYQP 241 (453)
T ss_dssp -SSSS--SHHHHHHHHHHHHT-HHHHHHH-HHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHH-HHHS-
T ss_pred ccccccccHHHHHHHHHHHcCCHHHHHHh-hcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHH-HhhcC
Confidence 0 11111 11 1222222 47899999999999765440 00000 00000000 00111
Q ss_pred CCCc--cc-cccccceEEeccCCCCCCCCceeEEEEEEeCCCCCCCCCC------------CCCCCCCHHHHHHHHHHHH
Q 015684 162 SDAH--II-DGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSV------------PGYGWIKPSQQFWFEQTSA 226 (402)
Q Consensus 162 ~~~~--~~-~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~~~~------------~~~g~i~~~q~~Wl~~~l~ 226 (402)
.... .. ....++.+.++. .+.+++||+..|...+.. +....++++|.+||++.|+
T Consensus 242 ~r~~~~~~~~~~~y~~~~~G~----------~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~ 311 (453)
T PF09423_consen 242 VRNPDPPGDQGRIYRSFRYGD----------LVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLA 311 (453)
T ss_dssp --GGG-BTTB----EEEEETT----------TEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHH
T ss_pred ccCCCccCCCCceEEEEecCC----------ceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHh
Confidence 1100 00 111234555554 278999999877553211 3345689999999999976
Q ss_pred HHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCC-CCCCChHHHHHHHHcCCe--eEEEeccCCCC
Q 015684 227 RLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGIS-SASVNSGFFTTMVAAGDV--KAVFTGHDHVN 302 (402)
Q Consensus 227 ~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~-~~~~~~~~l~~l~~~~~v--~~v~~GH~H~~ 302 (402)
+- ...+.|+.+-.|+................+... .+..-.++++.|.+. ++ .++|+|..|..
T Consensus 312 ~s------------~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~-~~~~vV~LSGDvH~~ 377 (453)
T PF09423_consen 312 SS------------QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRES-GIRNVVFLSGDVHAS 377 (453)
T ss_dssp H--------------SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHT-T---EEEEE-SSSSE
T ss_pred cC------------CCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhh-CCCCEEEEecCcchh
Confidence 42 466788888777644211110000000111111 111112445555444 34 48999999983
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.7e-06 Score=95.08 Aligned_cols=218 Identities=14% Similarity=0.068 Sum_probs=105.7
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCccCCCChhhHHHHHHHHHhHh
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~-~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
.+++|++++|+|-.-. ....+..+.+.+++.+||.+++ +||++.+... ..+..-...++.+
T Consensus 659 ~~l~Il~~nD~Hg~l~-----------------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~l 720 (1163)
T PRK09419 659 WELTILHTNDFHGHLD-----------------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMM 720 (1163)
T ss_pred eEEEEEEEeecccCCC-----------------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHH
Confidence 3599999999993221 1112233344445678998877 9996654321 1111111223323
Q ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC--------------CcccccC-CCCCccccccccceE-EeccCCCCC
Q 015684 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVTLK--------------NTLSQVN-PSDAHIIDGFGNYNL-EIGGVKGSG 184 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~--------------~~~~~~~-p~~~~~~~g~~~y~~-~~~~~~~~~ 184 (402)
...+. -++++||||+..+. +.+.+.+.... +-...+. ............|.+ ++.+
T Consensus 721 n~lg~-d~~~~GNHEfd~g~--~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G----- 792 (1163)
T PRK09419 721 KEMGY-DASTFGNHEFDWGP--DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG----- 792 (1163)
T ss_pred hCcCC-CEEEecccccccCh--HHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC-----
Confidence 23343 45699999996543 34444444321 1111100 000000001112322 3322
Q ss_pred CCCceeEEEEEEeCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCC
Q 015684 185 FENKSVLNLYFLDSGDY--STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQS 262 (402)
Q Consensus 185 ~~~~~~~~l~~lDs~~~--~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~ 262 (402)
..+.++.+-+... ...+.. ..+.--.+..+.+++..++++++ .....+|+++|........
T Consensus 793 ----~kIgiiGltt~~~~~~~~p~~-~~~l~f~d~~e~~~~~v~~Lr~~--------~~~D~VV~LsH~G~~~d~~---- 855 (1163)
T PRK09419 793 ----KKVGFIGLTTPETAYKTSPGN-VKNLEFKDPAEAAKKWVKELKEK--------EKVDAIIALTHLGSNQDRT---- 855 (1163)
T ss_pred ----EEEEEEEecccccccccCCCC-cCCcEEcCHHHHHHHHHHHHHhh--------cCCCEEEEEecCCcccccc----
Confidence 2255666654211 011110 01222223455577777777732 2566789999997743100
Q ss_pred CcccccCCcCCCCCCChHHHHHHHH-cCCeeEEEeccCCCCcccccCCCeeEEecC
Q 015684 263 NFTGVRQEGISSASVNSGFFTTMVA-AGDVKAVFTGHDHVNDFCGRLTGIQLCYGG 317 (402)
Q Consensus 263 ~~~G~~~~~~~~~~~~~~~l~~l~~-~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~ 317 (402)
.+ ......|.+ -.+|++++.||.|. ......+++.++-++
T Consensus 856 --~~------------~~~~~~lA~~v~gIDvIigGHsH~-~~~~~v~~~~ivqag 896 (1163)
T PRK09419 856 --TG------------EITGLELAKKVKGVDAIISAHTHT-LVDKVVNGTPVVQAY 896 (1163)
T ss_pred --cc------------ccHHHHHHHhCCCCCEEEeCCCCc-cccccCCCEEEEeCC
Confidence 00 111233444 35799999999998 454455777666443
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.68 E-value=4e-07 Score=86.02 Aligned_cols=95 Identities=23% Similarity=0.217 Sum_probs=54.3
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCC-CChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHH---
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGC-SDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAA--- 116 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~--- 116 (402)
++.+||+.+||+|+-...... ........+ .|....+.........+||.+++.||+++ .|.....+++.+.
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~---~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfD-eG~~~~~eEf~~~~~R 121 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKK---FLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFD-EGQWAGDEEFKKRYER 121 (410)
T ss_pred CCceEEEEecCchhcCCCCCc---cccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccc-cCccCChHHHHHHHHH
Confidence 578999999999997533110 000111111 23333333333444579999999999554 3332222222222
Q ss_pred HhHhH--hCCCCEEEEcCCCCCCCC
Q 015684 117 FAPAI--ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 117 l~~~~--~~~iP~~~v~GNHD~~~~ 139 (402)
++.+. +..+|+..+|||||....
T Consensus 122 fkkIf~~k~~~~~~~i~GNhDIGf~ 146 (410)
T KOG3662|consen 122 FKKIFGRKGNIKVIYIAGNHDIGFG 146 (410)
T ss_pred HHHhhCCCCCCeeEEeCCccccccc
Confidence 22222 248999999999998654
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.9e-08 Score=86.86 Aligned_cols=85 Identities=13% Similarity=0.128 Sum_probs=54.1
Q ss_pred EEEEEeccCCcCCCCCCCCC-CCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 45 KILQVADMHFANGKTTPCLD-VLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
+.+++||+|++.......+. ..|. +...++++.+.+.+++.+||.||++||+.........++.+.+.++. .
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~----~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~---~ 88 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPG----FQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEV---T 88 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCCh----hHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHh---c
Confidence 57899999999644211100 0110 11234566777777788999999999955433322444555555543 3
Q ss_pred CCCEEEEcCCCCC
Q 015684 124 NIPWVAVLGNHDQ 136 (402)
Q Consensus 124 ~iP~~~v~GNHD~ 136 (402)
..++++|+||||.
T Consensus 89 ~~~v~~V~GNHD~ 101 (225)
T TIGR00024 89 FRDLILIRGNHDA 101 (225)
T ss_pred CCcEEEECCCCCC
Confidence 5699999999996
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.4e-06 Score=76.73 Aligned_cols=64 Identities=14% Similarity=0.098 Sum_probs=38.4
Q ss_pred CCCeEEEEecChhhhhcccCCC-c----ccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCccccc
Q 015684 242 PAPGLVYFHIPLPEFAYFDQSN-F----TGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR 307 (402)
Q Consensus 242 ~~~~iv~~H~P~~~~~~~~~~~-~----~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~ 307 (402)
...-|+++|-|+.......... + .+. .+.+.....++..+..|++.-+.+++||||.|. .+...
T Consensus 164 ~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~-~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~-~f~~~ 232 (262)
T cd00844 164 QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFF-RQDIESGTLGSPAAEELLKHLKPRYWFSAHLHV-KFAAL 232 (262)
T ss_pred CCCcEEEeCCCCcchhhccchHHhhhcCccc-hhcccccCCCCHHHHHHHHHhCCCEEEEecCCc-cccee
Confidence 3468999999875532211000 0 000 011112234678888999998999999999998 45533
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.8e-06 Score=87.19 Aligned_cols=232 Identities=16% Similarity=0.112 Sum_probs=111.5
Q ss_pred CCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhH---HHHHHHH
Q 015684 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDA---AKSLNAA 116 (402)
Q Consensus 40 ~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~---~~~~~~~ 116 (402)
...+++|+|++|+|-.-..... .+.... .....+....+.+.-++.+..++|-+||++.+..-... .....+.
T Consensus 23 ~~~~l~ilhtnD~H~~l~~~~~-~~~~~~---~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~ 98 (517)
T COG0737 23 ETVKLTILHTNDLHGHLEPYDY-DDDGDT---DGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDL 98 (517)
T ss_pred CceeEEEEEeccccccceeccc-cccCcc---cccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHH
Confidence 3578999999999987542111 000000 00112232333333233455789999997665432111 1122233
Q ss_pred HhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCc--ccccCCCCCccccc-cccceEEeccCCCCCCCCceeEEE
Q 015684 117 FAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNT--LSQVNPSDAHIIDG-FGNYNLEIGGVKGSGFENKSVLNL 193 (402)
Q Consensus 117 l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~g-~~~y~~~~~~~~~~~~~~~~~~~l 193 (402)
++. .+ .=+.+.||||+.... +.+.+......+. ...+.......... ..+..+++.+ ..+.+
T Consensus 99 mN~---m~-yDa~tiGNHEFd~g~--~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g---------~KIgi 163 (517)
T COG0737 99 LNA---LG-YDAMTLGNHEFDYGL--EALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGG---------VKIGI 163 (517)
T ss_pred Hhh---cC-CcEEeecccccccCH--HHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCC---------eEEEE
Confidence 332 23 346678999997553 3444544433222 11111110000001 1222333333 23566
Q ss_pred EEEeCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCc
Q 015684 194 YFLDSGDYS--TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEG 271 (402)
Q Consensus 194 ~~lDs~~~~--~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~ 271 (402)
+.+.+.... ..+. ...++.-.+..+++++.+.+++++ ...-+|+++|.++....... ...+.
T Consensus 164 IG~~~~~~~~~~~~~-~~~~~~f~d~~e~~~~~i~elk~~---------~vD~iI~LsH~G~~~d~~~~------~~~~~ 227 (517)
T COG0737 164 IGLTTPTIPTWEKPN-AIEGVTFRDPIEAAKKYIPELKGE---------GVDVIIALSHLGIEDDLELA------SEVPG 227 (517)
T ss_pred EEecCCccccccccc-ccCCcEEcCHHHHHHHHHHHHHhc---------CCCEEEEEeccCcCcccccc------ccccc
Confidence 776652111 1111 123444456788888988888863 25678999999886421111 00000
Q ss_pred CCCCCCChHHHHHHHHcCCeeEEEeccCCCC----cccccCCCeeEEecC
Q 015684 272 ISSASVNSGFFTTMVAAGDVKAVFTGHDHVN----DFCGRLTGIQLCYGG 317 (402)
Q Consensus 272 ~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~----~~~~~~~gi~~~~~~ 317 (402)
. ..+.. ..+++++.||.|.. ......+|+.++.++
T Consensus 228 ~----------~~~~~-~~iD~i~~GH~H~~~~~~~~~~~~~~t~ivqag 266 (517)
T COG0737 228 D----------VDVAV-PGIDLIIGGHSHTVFPGGDKPGTVNGTPIVQAG 266 (517)
T ss_pred c----------ccccc-cCcceEeccCCcccccCCcccCccCCEEEEccC
Confidence 0 00001 34999999999962 111124566666554
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-06 Score=70.05 Aligned_cols=80 Identities=20% Similarity=0.174 Sum_probs=44.2
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHH-HHHHhcCC-CEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFIN-RMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
.+.++||+|++...--..+... ......+.+. +..+..+| |.|-+.||+..+.+.... +..+++.
T Consensus 5 mmyfisDtHfgh~nvi~~~pfs-------n~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~---a~~Iler--- 71 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFS-------NPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERA---AGLILER--- 71 (186)
T ss_pred EEEEecccccCCcceeecCCCC-------CHHHHhHHHHHhHHhcCCccceEEEecccccccchhhH---HHHHHHH---
Confidence 5678999999965432211100 0111112222 22223455 899999997666554333 3344443
Q ss_pred CCCCEEEEcCCCCCC
Q 015684 123 SNIPWVAVLGNHDQE 137 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~ 137 (402)
++-....|+||||-.
T Consensus 72 LnGrkhlv~GNhDk~ 86 (186)
T COG4186 72 LNGRKHLVPGNHDKC 86 (186)
T ss_pred cCCcEEEeeCCCCCC
Confidence 344468999999973
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.5e-07 Score=91.28 Aligned_cols=83 Identities=13% Similarity=0.201 Sum_probs=55.2
Q ss_pred CCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH---------hcCCCEEEEcCCccCCCCh----
Q 015684 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS---------AEKPDLIVFTGDNIFGFDA---- 106 (402)
Q Consensus 40 ~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~---------~~~pD~vv~~GDli~~~~~---- 106 (402)
.+..++++++||+|++.... ..+.++.+.+.+. ..+||.||++||++...+.
T Consensus 240 ~~~~~~i~~ISDlHlgs~~~---------------~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~ 304 (504)
T PRK04036 240 KDEKVYAVFISDVHVGSKEF---------------LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQ 304 (504)
T ss_pred CCCccEEEEEcccCCCCcch---------------hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccc
Confidence 35679999999999986531 1223345555555 5689999999997654221
Q ss_pred ---------hhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCC
Q 015684 107 ---------TDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (402)
Q Consensus 107 ---------~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~ 138 (402)
...++.+.+.+..+. ..+|++++|||||...
T Consensus 305 ~~~~~~~~~~~~~~~l~~~L~~L~-~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 305 EEELEIVDIYEQYEAAAEYLKQIP-EDIKIIISPGNHDAVR 344 (504)
T ss_pred hhhccchhhHHHHHHHHHHHHhhh-cCCeEEEecCCCcchh
Confidence 012334445555442 5789999999999743
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.9e-06 Score=75.81 Aligned_cols=90 Identities=24% Similarity=0.235 Sum_probs=43.7
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCC-hhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhH----HHHHHH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSD-LNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDA----AKSLNA 115 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~----~~~~~~ 115 (402)
.+++|+|++|+|-.-..... . +.....+.. ....+.+.+..++..|+ +++-+||.+.+...... .+...+
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~-~---~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~ 79 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLN-D---PNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNP 79 (282)
T ss_pred ceEEEEEEcccccCCcCcCC-c---ccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHH
Confidence 57899999999953221100 0 000001111 11223333333345666 56679996655422111 122223
Q ss_pred HHhHhHhCCCCEEEEcCCCCCCCC
Q 015684 116 AFAPAIASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 116 ~l~~~~~~~iP~~~v~GNHD~~~~ 139 (402)
+++. .+. =++++||||+...
T Consensus 80 ~mN~---mgy-Da~tlGNHEFd~g 99 (282)
T cd07407 80 IFRM---MPY-DLLTIGNHELYNY 99 (282)
T ss_pred HHHh---cCC-cEEeecccccCcc
Confidence 3332 343 4678999999643
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.8e-07 Score=83.60 Aligned_cols=76 Identities=17% Similarity=0.270 Sum_probs=47.6
Q ss_pred EEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-----CCCEEEEcCCccCCCCh-------------hh
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-----KPDLIVFTGDNIFGFDA-------------TD 108 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-----~pD~vv~~GDli~~~~~-------------~~ 108 (402)
+++||+|++.... ....++.+.+.++.. +||.||++||++..... .+
T Consensus 2 ~~iSDlHl~~~~~---------------~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~ 66 (243)
T cd07386 2 VFISDVHVGSKTF---------------LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYE 66 (243)
T ss_pred EEecccCCCchhh---------------hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHH
Confidence 6899999976431 122335566666554 56999999996544210 01
Q ss_pred HHHHHHHHHhHhHhCCCCEEEEcCCCCCCC
Q 015684 109 AAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (402)
Q Consensus 109 ~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~ 138 (402)
.++.+.+.++.+. .++|++++|||||...
T Consensus 67 ~~~~~~~~l~~L~-~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 67 QYEEAAEYLSDVP-SHIKIIIIPGNHDAVR 95 (243)
T ss_pred HHHHHHHHHHhcc-cCCeEEEeCCCCCccc
Confidence 2233444444432 4689999999999853
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.9e-05 Score=71.26 Aligned_cols=92 Identities=17% Similarity=0.155 Sum_probs=44.0
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc----CC-CEEEEcCCccCCCChhhHHHHHHHHHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE----KP-DLIVFTGDNIFGFDATDAAKSLNAAFA 118 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~----~p-D~vv~~GDli~~~~~~~~~~~~~~~l~ 118 (402)
++|++++|+|-.-...... . .....+..+.+.++++ .+ -+++-+||.+.+... .....-...++
T Consensus 1 ltIl~tnD~Hg~l~~~~~~---------~-gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-~~~~~g~~~~~ 69 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTG---------E-YGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-SDLQDAEPDFR 69 (285)
T ss_pred CEEEEEcccccccccCCCC---------C-ccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-HHhcCcchHHH
Confidence 5799999999653321100 0 1111222233333322 33 488899996543321 11111111222
Q ss_pred HhHhCCCCEEEEcCCCCCCCCCCHHHHHHHH
Q 015684 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHI 149 (402)
Q Consensus 119 ~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~ 149 (402)
.+...+.-+. ++||||+..+. +.+.+..
T Consensus 70 ~~n~~g~Da~-~~GNHEfD~G~--~~L~~~~ 97 (285)
T cd07405 70 GMNLVGYDAM-AVGNHEFDNPL--EVLRQQM 97 (285)
T ss_pred HHHhhCCcEE-eecccccccCH--HHHHHHH
Confidence 2223566544 66999997653 3444443
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=7e-07 Score=76.17 Aligned_cols=77 Identities=17% Similarity=0.148 Sum_probs=43.6
Q ss_pred EEEeccCCcCCCCCCCCCCCcccccCCCChh-HHHHHHHHHHh--cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLN-TTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
.++||+|++......... + .+...+ ..+.+.+.+.+ .++|.|+++|| +.+.+....+ .+.++ +.
T Consensus 2 ~~isD~Hlg~~~~~~~~~----~--~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GD-l~~~~~~~~~---~~~l~---~~ 68 (168)
T cd07390 2 YFTSDTHFGHANILRFCN----R--PFDDVEEMDEALIRNWNETVGPDDTVYHLGD-FSFGGKAGTE---LELLS---RL 68 (168)
T ss_pred eEecccccCCHHHHccCC----C--CCCCHHHHHHHHHHHHhhhcCCCCEEEEeCC-CCCCCChHHH---HHHHH---hC
Confidence 479999999754211000 0 001111 22333444443 37899999999 5544433222 23333 35
Q ss_pred CCCEEEEcCCCCC
Q 015684 124 NIPWVAVLGNHDQ 136 (402)
Q Consensus 124 ~iP~~~v~GNHD~ 136 (402)
+.|+++|+||||.
T Consensus 69 ~~~~~~v~GNHD~ 81 (168)
T cd07390 69 NGRKHLIKGNHDS 81 (168)
T ss_pred CCCeEEEeCCCCc
Confidence 6799999999997
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.1e-05 Score=78.55 Aligned_cols=210 Identities=18% Similarity=0.195 Sum_probs=92.8
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccc-cCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQV-AGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
++|+|++|+|-.-.+............ ........+..+.+.++++.| -+++.+||.+.+......+ .-...+..+.
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~-~g~~~i~~~N 79 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLF-GGRADAALMN 79 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhc-CCHHHHHHHh
Confidence 579999999965322110000000000 001122222223333333444 5888999965443211111 1011222222
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcc--cccCCCCCcccc-ccccce-EEeccCCCCCCCCceeEEEEEEe
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL--SQVNPSDAHIID-GFGNYN-LEIGGVKGSGFENKSVLNLYFLD 197 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~-g~~~y~-~~~~~~~~~~~~~~~~~~l~~lD 197 (402)
..+. =+.++||||+..+. +.+.+++....+.+ ..+......... ...-|. +.+.+ ..+.++.+.
T Consensus 80 ~~g~-Da~~lGNHEFd~G~--~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g---------~kIgiiGl~ 147 (550)
T TIGR01530 80 AAGF-DFFTLGNHEFDAGN--EGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAG---------EKIAIIGLD 147 (550)
T ss_pred ccCC-CEEEeccccccCCH--HHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECC---------eEEEEEEee
Confidence 2344 46788999996543 44555544332211 111100000010 111232 23333 226677776
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCC
Q 015684 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (402)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~ 277 (402)
+.........+..+..-.+.++=+++..++|++. ...-+|+++|......
T Consensus 148 ~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~---------g~D~II~lsH~g~~~d--------------------- 197 (550)
T TIGR01530 148 TVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQ---------GINKIILLSHAGFEKN--------------------- 197 (550)
T ss_pred cCcccccccCCCCceEECCHHHHHHHHHHHHHhC---------CCCEEEEEecCCcHHH---------------------
Confidence 5221111111111221122334366666667642 4567888888865321
Q ss_pred ChHHHHHHHHc-CCeeEEEeccCCC
Q 015684 278 NSGFFTTMVAA-GDVKAVFTGHDHV 301 (402)
Q Consensus 278 ~~~~l~~l~~~-~~v~~v~~GH~H~ 301 (402)
..+.++ .+|+++++||.|.
T Consensus 198 -----~~la~~~~~iD~IigGHsH~ 217 (550)
T TIGR01530 198 -----CEIAQKINDIDVIVSGDSHY 217 (550)
T ss_pred -----HHHHhcCCCCCEEEeCCCCc
Confidence 123332 4799999999998
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.34 E-value=0.0002 Score=67.19 Aligned_cols=17 Identities=18% Similarity=0.397 Sum_probs=13.8
Q ss_pred HHHc-CCeeEEEeccCCC
Q 015684 285 MVAA-GDVKAVFTGHDHV 301 (402)
Q Consensus 285 l~~~-~~v~~v~~GH~H~ 301 (402)
|.++ .+|++++.||.|.
T Consensus 226 lA~~v~gIDvIigGHsH~ 243 (313)
T cd08162 226 LAALLSGVDVIIAGGSNT 243 (313)
T ss_pred HHhcCCCCCEEEeCCCCc
Confidence 4444 4799999999998
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00016 Score=74.56 Aligned_cols=224 Identities=16% Similarity=0.119 Sum_probs=100.1
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHHHHH------
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLN------ 114 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~------ 114 (402)
.+++|++.+|+|-.-.....+.+. +... ..-.++ ..+.+.++++.+ -++|-+||++.+..- ..+....
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~-~~~~--~Glar~-atli~~~R~e~~n~llvD~GD~~qGsp~-~~~~~~~~~~~g~ 98 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDK-PTEK--FGLVRT-ASLIKAARAEAKNSVLVDNGDLIQGSPL-GDYMAAKGLKAGD 98 (649)
T ss_pred ceEEEEEEcccccCccCCccccCC-cccc--cCHHHH-HHHHHHHHHhCCCEEEEECCCcCCCchh-hhhhhhccccCCC
Confidence 579999999999763321111110 0000 011223 333333344444 478889996654422 1111110
Q ss_pred --HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcc--cccC-CCCCccccccccceE-Ee--ccCCCCCCC
Q 015684 115 --AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL--SQVN-PSDAHIIDGFGNYNL-EI--GGVKGSGFE 186 (402)
Q Consensus 115 --~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--~~~~-p~~~~~~~g~~~y~~-~~--~~~~~~~~~ 186 (402)
-.++.+...+. =+.++||||+..+ .+.+.+.+....+.+ ..+. +.... .-+.-|.+ +. ...+|..
T Consensus 99 ~~p~i~amN~lgy-Da~tlGNHEFd~G--~~~L~~~~~~a~fP~l~ANv~~~~~~~--~~~~py~I~e~~v~~~~G~~-- 171 (649)
T PRK09420 99 VHPVYKAMNTLDY-DVGNLGNHEFNYG--LDYLKKALAGAKFPYVNANVIDAKTGK--PLFTPYLIKEKEVKDKDGKE-- 171 (649)
T ss_pred cchHHHHHHhcCC-cEEeccchhhhcC--HHHHHHHHhcCCCCEEEEEEEecCCCC--cccCCeEEEEEEeeccCCCc--
Confidence 12222223444 4678899999654 345555554433221 1111 11000 00112322 11 1111100
Q ss_pred CceeEEEEEEeCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcc
Q 015684 187 NKSVLNLYFLDSGDYSTVPSVPGYG-WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFT 265 (402)
Q Consensus 187 ~~~~~~l~~lDs~~~~~~~~~~~~g-~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~ 265 (402)
....+.++.+-+............| ..-.+.++-+++...+++++ ...-+|++.|..+.....
T Consensus 172 ~~vkIGiIGl~~p~~~~w~~~~~~g~v~~~D~ve~a~~~v~~Lk~~---------gaDvII~LsH~G~~~d~~------- 235 (649)
T PRK09420 172 HTIKIGYIGFVPPQIMVWDKANLEGKVTVRDITETARKYVPEMKEK---------GADIVVAIPHSGISADPY------- 235 (649)
T ss_pred cceEEEEEEecCccccccccccCcCceEECCHHHHHHHHHHHHHHc---------CCCEEEEEecCCcCCCCc-------
Confidence 0122556665442111000000011 11223455577777777752 466789999987733100
Q ss_pred cccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCC
Q 015684 266 GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVN 302 (402)
Q Consensus 266 G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~ 302 (402)
.+ . ..|+. ..|.+-.+|++++.||.|..
T Consensus 236 ---~~-~---aen~~--~~l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 236 ---KA-M---AENSV--YYLSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred ---cc-c---ccchh--HHHhcCCCCCEEEeCCCCcc
Confidence 00 0 01221 22444568999999999983
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-06 Score=76.08 Aligned_cols=88 Identities=19% Similarity=0.239 Sum_probs=54.4
Q ss_pred eEEEEEeccCCcCCCCCCC-CCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCCh--hhHHHHHHHHHhHh
Q 015684 44 FKILQVADMHFANGKTTPC-LDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--TDAAKSLNAAFAPA 120 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~--~~~~~~~~~~l~~~ 120 (402)
-+.+++||+|++....-.- .-..|. +...++.+.+.++++.++|+-||+.||+-.+.+. ...+.....+++.+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~----~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~ 95 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPR----YQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELL 95 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCc----hhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHh
Confidence 4679999999996643110 011111 1234556667778889999999999994444432 23334444444433
Q ss_pred HhCCCCEEEEcCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQE 137 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~ 137 (402)
... -|.++.||||..
T Consensus 96 ~~~--evi~i~GNHD~~ 110 (235)
T COG1407 96 DER--EVIIIRGNHDNG 110 (235)
T ss_pred ccC--cEEEEeccCCCc
Confidence 222 599999999974
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.0001 Score=76.95 Aligned_cols=223 Identities=21% Similarity=0.205 Sum_probs=100.4
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHHHH--------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSL-------- 113 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~-------- 113 (402)
.++|++++|+|-.-.....+.+ .+.. ...-.++.. +.+.++++.+ -++|-+||++.+..-...+...
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~-~~~~--~~GlaRlAt-lI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~ 190 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQD-KPSQ--TLGLAKTAV-LIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQ 190 (814)
T ss_pred EEEEEEEEeecCCccccccccc-Cccc--cccHHHHHH-HHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcc
Confidence 6999999999976332211111 0000 011223322 3333344444 4788999966554211111000
Q ss_pred HHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcc--cccC-CCCCccccccccceEE-e--ccCCCCCCCC
Q 015684 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL--SQVN-PSDAHIIDGFGNYNLE-I--GGVKGSGFEN 187 (402)
Q Consensus 114 ~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--~~~~-p~~~~~~~g~~~y~~~-~--~~~~~~~~~~ 187 (402)
.-.+..+...+. =+.++||||+..+. +.+.+.+....+.+ ..+. ...... .+.-|.+. . ...+|.. .
T Consensus 191 ~P~i~amN~LGy-DA~tLGNHEFDyG~--d~L~~~l~~a~fPvl~ANV~~~~~~~~--~~~PY~I~e~~~~d~~G~~--~ 263 (814)
T PRK11907 191 HPMYAALEALGF-DAGTLGNHEFNYGL--DYLEKVIATANMPIVNANVLDPTTGDF--LYTPYTIVTKTFTDTEGKK--V 263 (814)
T ss_pred hHHHHHHhccCC-CEEEechhhcccCH--HHHHHHHHhCCCCEEEeeeeecCCCCc--cCCCeEEEEEEEecCCCcc--c
Confidence 012222223444 35788999997654 45555555433221 1111 110000 01123322 1 1111100 0
Q ss_pred ceeEEEEEEeCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCccc
Q 015684 188 KSVLNLYFLDSGDYSTVPSVPGYG-WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTG 266 (402)
Q Consensus 188 ~~~~~l~~lDs~~~~~~~~~~~~g-~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G 266 (402)
...+.++.+-+............| ..-.+.++.+++...+|+++ ...-+|++.|..+...... .+
T Consensus 264 ~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~---------GaDvIIaLsH~G~~~d~~~-----~~ 329 (814)
T PRK11907 264 TLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAA---------GADIVLVLSHSGIGDDQYE-----VG 329 (814)
T ss_pred ceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhc---------CCCEEEEEeCCCccccccc-----cc
Confidence 122556666442111100000011 12234456677777777752 4667889999876431000 00
Q ss_pred ccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCC
Q 015684 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHV 301 (402)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~ 301 (402)
. .|.. ..|.+-.+|++++.||.|.
T Consensus 330 --~-------En~~--~~LA~v~GIDaIvgGHsH~ 353 (814)
T PRK11907 330 --E-------ENVG--YQIASLSGVDAVVTGHSHA 353 (814)
T ss_pred --c-------cchh--hHHhcCCCCCEEEECCCCC
Confidence 0 1222 2244556899999999999
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.8e-06 Score=74.69 Aligned_cols=70 Identities=29% Similarity=0.383 Sum_probs=43.2
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
||+++|||+|-. ...++.+.+.++.. ..|.||++||++.. + +...+.+...++ +.
T Consensus 1 m~~~~IsDIHG~--------------------~~~l~~ll~~i~~~~~~~d~li~lGD~iDr-G-~~s~~v~~~l~~-~~ 57 (235)
T PHA02239 1 MAIYVVPDIHGE--------------------YQKLLTIMDKINNERKPEETIVFLGDYVDR-G-KRSKDVVNYIFD-LM 57 (235)
T ss_pred CeEEEEECCCCC--------------------HHHHHHHHHHHhhcCCCCCEEEEecCcCCC-C-CChHHHHHHHHH-Hh
Confidence 689999999931 12234444544332 35999999996554 3 223333433333 22
Q ss_pred hCCCCEEEEcCCCCC
Q 015684 122 ASNIPWVAVLGNHDQ 136 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~ 136 (402)
..+.++++++||||.
T Consensus 58 ~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 58 SNDDNVVTLLGNHDD 72 (235)
T ss_pred hcCCCeEEEECCcHH
Confidence 345689999999996
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00028 Score=64.00 Aligned_cols=63 Identities=14% Similarity=0.273 Sum_probs=37.4
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhc
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~ 152 (402)
+.+.+..++.++|++|..||...+.... . . +..+.+...++-++.+ |||++... ++.+++...
T Consensus 19 ~~l~~lk~~~~~D~vi~NgEn~~gg~gl-~-~---~~~~~L~~~G~D~iTl-GNH~fD~g----el~~~l~~~ 81 (255)
T cd07382 19 EHLPKLKKEYKIDFVIANGENAAGGKGI-T-P---KIAKELLSAGVDVITM-GNHTWDKK----EILDFIDEE 81 (255)
T ss_pred HHHHHHHHHCCCCEEEECCccccCCCCC-C-H---HHHHHHHhcCCCEEEe-cccccCcc----hHHHHHhcC
Confidence 4444554557899999999976654111 1 1 2233333467775544 99998655 344555443
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00021 Score=73.45 Aligned_cols=102 Identities=19% Similarity=0.163 Sum_probs=49.0
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcC-CCEEEEcCCccCCCChhhHHHHH--------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEK-PDLIVFTGDNIFGFDATDAAKSL-------- 113 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-pD~vv~~GDli~~~~~~~~~~~~-------- 113 (402)
+++|++.+|+|-.-.....+.+ .+.. ...-.++.. +.+.++++. --++|-+||++.+..-. .+...
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~-~~~~--~~Glar~at-li~~~R~e~~n~lllD~GD~~qGsp~~-~~~~~~~~~~~~~ 76 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKD-KPTD--KFGLTRTAT-LIKQARAEVKNSVLVDNGDLIQGSPLG-DYMAAQGLKAGQM 76 (626)
T ss_pred eEEEEEEcCCccCccCCcccCC-CCCC--CcCHHHHHH-HHHHHHhhCCCeEEEECCCcCCCccch-hhhhhccccCCCc
Confidence 5899999999976433211111 0100 011122322 333333333 35788899966554221 11110
Q ss_pred HHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhc
Q 015684 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152 (402)
Q Consensus 114 ~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~ 152 (402)
.-.++.+...+. =+.++||||+..+ .+.+.+.+...
T Consensus 77 ~p~~~~mN~lgy-Da~tlGNHEFd~G--~~~L~~~~~~a 112 (626)
T TIGR01390 77 HPVYKAMNLLKY-DVGNLGNHEFNYG--LPFLKQAIAAA 112 (626)
T ss_pred ChHHHHHhhcCc-cEEeccccccccc--HHHHHHHHHhC
Confidence 011222222344 3578899998654 34555555443
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.1e-06 Score=74.87 Aligned_cols=67 Identities=21% Similarity=0.229 Sum_probs=42.3
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-hcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-AEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
|++++|||+|-. ...++.+.+.+. ..++|.++++||+|. .| ++..+.+. .+ .+
T Consensus 1 M~~~vIGDIHG~--------------------~~~l~~ll~~~~~~~~~D~li~lGDlVd-rG-p~s~~vl~-~l---~~ 54 (275)
T PRK00166 1 MATYAIGDIQGC--------------------YDELQRLLEKIDFDPAKDTLWLVGDLVN-RG-PDSLEVLR-FV---KS 54 (275)
T ss_pred CcEEEEEccCCC--------------------HHHHHHHHHhcCCCCCCCEEEEeCCccC-CC-cCHHHHHH-HH---Hh
Confidence 579999999942 222333333332 246899999999554 44 33333332 22 23
Q ss_pred CCCCEEEEcCCCCC
Q 015684 123 SNIPWVAVLGNHDQ 136 (402)
Q Consensus 123 ~~iP~~~v~GNHD~ 136 (402)
.+.++.+|.||||.
T Consensus 55 l~~~~~~VlGNHD~ 68 (275)
T PRK00166 55 LGDSAVTVLGNHDL 68 (275)
T ss_pred cCCCeEEEecChhH
Confidence 45679999999997
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.06 E-value=8.2e-05 Score=70.98 Aligned_cols=213 Identities=15% Similarity=0.291 Sum_probs=108.8
Q ss_pred HHHHhcCCCEEEEcCCccCCCChhh-------------------------HHHH------HHHHHhHhHhCCCCEEEEcC
Q 015684 84 RMISAEKPDLIVFTGDNIFGFDATD-------------------------AAKS------LNAAFAPAIASNIPWVAVLG 132 (402)
Q Consensus 84 ~~i~~~~pD~vv~~GDli~~~~~~~-------------------------~~~~------~~~~l~~~~~~~iP~~~v~G 132 (402)
+.+.+++|||||++||.|+.++... .|+. ...-|+.+ ...+||++.+-
T Consensus 162 ~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaa-hA~~Pwi~~WD 240 (522)
T COG3540 162 KTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAA-HAAFPWIVQWD 240 (522)
T ss_pred HHHHhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHh-hccCCEEEEec
Confidence 3455688999999999999886321 1110 11122222 25789999999
Q ss_pred CCCCCCCCCHHH-------------------HHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEE
Q 015684 133 NHDQESTLSREG-------------------VMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNL 193 (402)
Q Consensus 133 NHD~~~~~~~~~-------------------~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l 193 (402)
.||..++..... ...++...|.-.....+ .+.-+-++.++ +.+.+
T Consensus 241 DHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~------~~~lYR~~tyG----------~La~~ 304 (522)
T COG3540 241 DHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPT------DGRLYRSFTYG----------PLADL 304 (522)
T ss_pred cccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCc------cceeeeeeccc----------cccce
Confidence 999876543210 11122111111111100 11112223333 34789
Q ss_pred EEEeCCCCCCCC----CC---------CCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhccc
Q 015684 194 YFLDSGDYSTVP----SV---------PGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFD 260 (402)
Q Consensus 194 ~~lDs~~~~~~~----~~---------~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~ 260 (402)
.+||+..|.... +. .....+...|.+||+..|... +..|.|+..-.|+.......
T Consensus 305 ~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~S------------katWnVia~q~~~~~~~~d~ 372 (522)
T COG3540 305 FVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGAS------------KATWNVIAQQMPLGLVVFDG 372 (522)
T ss_pred eeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhc------------chhhhhhhhhcceeEeecCC
Confidence 999998876221 11 123457889999999997753 45577777777763311000
Q ss_pred CCCcccc--cCCcCCCCCCChHHHHHHHHcCCee--EEEeccCCCCcccccC--C--------CeeEEecCCccCCCCCC
Q 015684 261 QSNFTGV--RQEGISSASVNSGFFTTMVAAGDVK--AVFTGHDHVNDFCGRL--T--------GIQLCYGGGFGYHAYGK 326 (402)
Q Consensus 261 ~~~~~G~--~~~~~~~~~~~~~~l~~l~~~~~v~--~v~~GH~H~~~~~~~~--~--------gi~~~~~~~~g~~~y~~ 326 (402)
.....|. ..++..-.....+.+-.+++..++. ++|.|.+|. .+...+ + -.+-..+++...++||+
T Consensus 373 ~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~-~wA~~l~~d~a~~~~~~~f~Efv~tsi~sG~~gp 451 (522)
T COG3540 373 SPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHY-SWAHDLDPDFAQFEDFAPFWEFVSTSINSGGFGP 451 (522)
T ss_pred CccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHH-HHHhhcCcchhcccccCceeeEeeccCcCCCcCC
Confidence 0000000 0011111112334444555544444 999999997 343322 1 12333445556677765
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.7e-05 Score=66.98 Aligned_cols=56 Identities=25% Similarity=0.307 Sum_probs=32.8
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChh--hH----HHHHHHHHhHhH---------------hCCCCEEEEcCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDAT--DA----AKSLNAAFAPAI---------------ASNIPWVAVLGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~----~~~~~~~l~~~~---------------~~~iP~~~v~GNHD~ 136 (402)
.....+....+||.|++.||++. .+.. ++ +..+.+.+-.-. ..++|++.|+||||.
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLfd-~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLFS-SQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred HHHHHHHHhcCCCEEEEeccccC-CCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 33444445579999999999664 4432 11 122222221100 014899999999998
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.6e-05 Score=68.86 Aligned_cols=46 Identities=22% Similarity=0.128 Sum_probs=28.5
Q ss_pred cCCCEEEEcCCccCCCChhhHHHHHH---HHHhHhHhCCCCEEEEcCCCCC
Q 015684 89 EKPDLIVFTGDNIFGFDATDAAKSLN---AAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 89 ~~pD~vv~~GDli~~~~~~~~~~~~~---~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
.+.|.+|++||++ +.+. ...+.+. +.-....+.+.++++++||||.
T Consensus 31 ~~~d~lv~lGD~v-drG~-~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~ 79 (208)
T cd07425 31 GGSTHLVQLGDIF-DRGP-DVIEILWLLYKLEQEAAKAGGKVHFLLGNHEL 79 (208)
T ss_pred CCCcEEEEECCCc-CCCc-CHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcH
Confidence 3689999999955 4442 2222222 2211222356789999999997
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.3e-05 Score=68.25 Aligned_cols=64 Identities=20% Similarity=0.202 Sum_probs=38.8
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
||+++||+|-. ...++.+.+.+.. .++|.++++||++ +.+. ...+ .++.+..
T Consensus 2 ri~~isDiHg~--------------------~~~l~~~l~~~~~~~~~d~~~~~GD~v-~~g~-~~~~----~~~~l~~- 54 (207)
T cd07424 2 RDFVVGDIHGH--------------------YSLLQKALDAVGFDPARDRLISVGDLI-DRGP-ESLA----CLELLLE- 54 (207)
T ss_pred CEEEEECCCCC--------------------HHHHHHHHHHcCCCCCCCEEEEeCCcc-cCCC-CHHH----HHHHHhc-
Confidence 68999999921 1223333343332 4689999999955 4432 2222 2222222
Q ss_pred CCCEEEEcCCCCC
Q 015684 124 NIPWVAVLGNHDQ 136 (402)
Q Consensus 124 ~iP~~~v~GNHD~ 136 (402)
.+++++.||||.
T Consensus 55 -~~~~~v~GNhe~ 66 (207)
T cd07424 55 -PWFHAVRGNHEQ 66 (207)
T ss_pred -CCEEEeECCChH
Confidence 368999999996
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0037 Score=56.91 Aligned_cols=71 Identities=20% Similarity=0.248 Sum_probs=43.6
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHH-HHHHHHHHhcCCCEEEEcCCccCCC-ChhhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTT-AFINRMISAEKPDLIVFTGDNIFGF-DATDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~~pD~vv~~GDli~~~-~~~~~~~~~~~~l~~~~ 121 (402)
|||+++.|+=-..+ ...+ +.+.++-++.++|++|..||+..+. +.+ . +..+.+.
T Consensus 1 m~ilfiGDi~G~~G------------------r~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~--~----~~~~~L~ 56 (266)
T TIGR00282 1 IKFLFIGDVYGKAG------------------RKIVKNNLPQLKSKYQADLVIANGENTTHGKGLT--L----KIYEFLK 56 (266)
T ss_pred CeEEEEEecCCHHH------------------HHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCC--H----HHHHHHH
Confidence 68999999863221 1122 3333444456899999999966543 222 1 2333344
Q ss_pred hCCCCEEEEcCCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~ 139 (402)
+.++-++.+ |||.+...
T Consensus 57 ~~GvDviT~-GNH~~Dkg 73 (266)
T TIGR00282 57 QSGVNYITM-GNHTWFQK 73 (266)
T ss_pred hcCCCEEEc-cchhccCc
Confidence 578887766 99998654
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.76 E-value=8.7e-05 Score=66.86 Aligned_cols=42 Identities=29% Similarity=0.285 Sum_probs=26.2
Q ss_pred CCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 91 PDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 91 pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
.|.+|++||+|.... ...+.+ +.+..+.. .-.++++.||||.
T Consensus 38 ~d~lv~lGDlIDrG~--~s~evl-~~l~~l~~-~~~~~~v~GNHE~ 79 (234)
T cd07423 38 GRRAVFVGDLVDRGP--DSPEVL-RLVMSMVA-AGAALCVPGNHDN 79 (234)
T ss_pred CCEEEEECCccCCCC--CHHHHH-HHHHHHhh-CCcEEEEECCcHH
Confidence 689999999665432 233333 23333222 2358899999996
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=8e-05 Score=66.29 Aligned_cols=68 Identities=25% Similarity=0.185 Sum_probs=41.3
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-CCCEEEEcCCccCCCChhhHHHHHHHHHhH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLIVFTGDNIFGFDATDAAKSLNAAFAP 119 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~pD~vv~~GDli~~~~~~~~~~~~~~~l~~ 119 (402)
+.--|+.++||+|-. ...++.+.+.+... +.|.++++||+|. .| ++..+.+. .+.
T Consensus 14 ~~~~ri~vigDIHG~--------------------~~~L~~lL~~i~~~~~~D~li~lGDlvD-rG-p~s~~vl~-~l~- 69 (218)
T PRK11439 14 HQWRHIWLVGDIHGC--------------------FEQLMRKLRHCRFDPWRDLLISVGDLID-RG-PQSLRCLQ-LLE- 69 (218)
T ss_pred CCCCeEEEEEcccCC--------------------HHHHHHHHHhcCCCcccCEEEEcCcccC-CC-cCHHHHHH-HHH-
Confidence 334499999999942 23334444444333 6799999999554 43 33333332 222
Q ss_pred hHhCCCCEEEEcCCCCC
Q 015684 120 AIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~ 136 (402)
+ ..+++|.||||.
T Consensus 70 --~--~~~~~v~GNHE~ 82 (218)
T PRK11439 70 --E--HWVRAVRGNHEQ 82 (218)
T ss_pred --c--CCceEeeCchHH
Confidence 2 246789999995
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00013 Score=64.93 Aligned_cols=70 Identities=23% Similarity=0.280 Sum_probs=41.4
Q ss_pred cCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-hcCCCEEEEcCCccCCCChhhHHHHHHHHH
Q 015684 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-AEKPDLIVFTGDNIFGFDATDAAKSLNAAF 117 (402)
Q Consensus 39 ~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-~~~pD~vv~~GDli~~~~~~~~~~~~~~~l 117 (402)
+.+..=||+++||+|-. ...++.+.+.+. ..+.|.+++.||++ +.| +...+.+ +.+
T Consensus 10 ~~~~~~ri~visDiHg~--------------------~~~l~~~l~~~~~~~~~d~l~~lGD~v-drG-~~~~~~l-~~l 66 (218)
T PRK09968 10 NAHHYRHIWVVGDIHGE--------------------YQLLQSRLHQLSFCPETDLLISVGDNI-DRG-PESLNVL-RLL 66 (218)
T ss_pred cCCCCCeEEEEEeccCC--------------------HHHHHHHHHhcCCCCCCCEEEECCCCc-CCC-cCHHHHH-HHH
Confidence 33333499999999942 223333333333 24689999999955 443 2222333 222
Q ss_pred hHhHhCCCCEEEEcCCCCC
Q 015684 118 APAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 118 ~~~~~~~iP~~~v~GNHD~ 136 (402)
. + -.++++.||||.
T Consensus 67 ~---~--~~~~~v~GNHE~ 80 (218)
T PRK09968 67 N---Q--PWFISVKGNHEA 80 (218)
T ss_pred h---h--CCcEEEECchHH
Confidence 2 1 247899999996
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0001 Score=66.92 Aligned_cols=64 Identities=20% Similarity=0.218 Sum_probs=39.4
Q ss_pred EEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCC
Q 015684 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNI 125 (402)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~i 125 (402)
.+|||+|-. ...++.+.+.+.. .+.|.++++||+|. .| +++.+.+. .+. +.+.
T Consensus 2 yvIGDIHG~--------------------~~~L~~LL~~i~~~~~~D~Li~lGDlVd-RG-p~s~evl~-~l~---~l~~ 55 (257)
T cd07422 2 YAIGDIQGC--------------------YDELQRLLEKINFDPAKDRLWLVGDLVN-RG-PDSLETLR-FVK---SLGD 55 (257)
T ss_pred EEEECCCCC--------------------HHHHHHHHHhcCCCCCCCEEEEecCcCC-CC-cCHHHHHH-HHH---hcCC
Confidence 689999942 2233334443432 36799999999554 44 33333332 222 3445
Q ss_pred CEEEEcCCCCC
Q 015684 126 PWVAVLGNHDQ 136 (402)
Q Consensus 126 P~~~v~GNHD~ 136 (402)
.+.+|.||||.
T Consensus 56 ~v~~VlGNHD~ 66 (257)
T cd07422 56 SAKTVLGNHDL 66 (257)
T ss_pred CeEEEcCCchH
Confidence 78999999997
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00017 Score=65.77 Aligned_cols=67 Identities=19% Similarity=0.198 Sum_probs=40.8
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-hcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-AEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
|++.+|+|+|-. ...++.+.+.++ ..+.|.++++||+|... ++..+.+. .+. +
T Consensus 1 m~~YvIGDIHGc--------------------~daL~~LL~~i~f~~~~D~l~~lGDlVdRG--P~slevL~-~l~---~ 54 (279)
T TIGR00668 1 MATYLIGDLHGC--------------------YDELQALLERVEFDPGQDTLWLTGDLVARG--PGSLEVLR-YVK---S 54 (279)
T ss_pred CcEEEEEcccCC--------------------HHHHHHHHHHhCcCCCCCEEEEeCCccCCC--CCHHHHHH-HHH---h
Confidence 467899999942 223344444443 23579999999955543 33333332 222 2
Q ss_pred CCCCEEEEcCCCCC
Q 015684 123 SNIPWVAVLGNHDQ 136 (402)
Q Consensus 123 ~~iP~~~v~GNHD~ 136 (402)
.+..+.+|.||||.
T Consensus 55 l~~~~~~VlGNHD~ 68 (279)
T TIGR00668 55 LGDAVRLVLGNHDL 68 (279)
T ss_pred cCCCeEEEEChhHH
Confidence 34457789999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00024 Score=64.46 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=26.7
Q ss_pred CCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 91 PDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 91 pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
-|.+|++||+|.. | +++.+.+..++ .+. ..-+++++.||||.
T Consensus 37 ~d~li~lGDliDR-G-p~S~~vl~~~~-~~~-~~~~~~~l~GNHE~ 78 (245)
T PRK13625 37 QRKLAFVGDLTDR-G-PHSLRMIEIVW-ELV-EKKAAYYVPGNHCN 78 (245)
T ss_pred CCEEEEECcccCC-C-cChHHHHHHHH-HHh-hCCCEEEEeCccHH
Confidence 4799999996653 3 33444443332 222 23479999999985
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00021 Score=63.88 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=32.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
..+.+.+...++|.+|++||++.. +. ...+.+. .+..+.....+++++.||||.
T Consensus 14 ~~~l~~~~~~~~d~li~lGD~vdr-g~-~~~~~l~-~l~~~~~~~~~~~~l~GNHe~ 67 (225)
T cd00144 14 LRLLEKIGFPPNDKLIFLGDYVDR-GP-DSVEVID-LLLALKILPDNVILLRGNHED 67 (225)
T ss_pred HHHHHHhCCCCCCEEEEECCEeCC-CC-CcHHHHH-HHHHhcCCCCcEEEEccCchh
Confidence 344444444678999999995554 32 2223332 222221114579999999997
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00039 Score=62.88 Aligned_cols=78 Identities=13% Similarity=0.204 Sum_probs=51.3
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-----------cCCCEEEEcCCccCCCCh-------
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-----------EKPDLIVFTGDNIFGFDA------- 106 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-----------~~pD~vv~~GDli~~~~~------- 106 (402)
.|+.+||+|++.... ....++.+.+.+.. .+...||++||.+.+.+.
T Consensus 1 ~i~~vSgL~ig~~~~---------------~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~ 65 (257)
T cd07387 1 YIALVSGLGLGGNAE---------------SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTK 65 (257)
T ss_pred CEEEEcccccCCCcc---------------chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhh
Confidence 378999999997642 12334555565552 244579999997775532
Q ss_pred ------------hhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCC
Q 015684 107 ------------TDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (402)
Q Consensus 107 ------------~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~ 138 (402)
.+.++.+.+.+..+. ..+|+.++|||||-..
T Consensus 66 ~~~~~~~~~~~~~~~~~~ld~~l~~l~-~~i~V~imPG~~Dp~~ 108 (257)
T cd07387 66 ARYLTKKSSAASVEAVKELDNFLSQLA-SSVPVDLMPGEFDPAN 108 (257)
T ss_pred hhccccccchhhHHHHHHHHHHHHhhh-cCCeEEECCCCCCccc
Confidence 123444555555443 5899999999999854
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00036 Score=62.25 Aligned_cols=43 Identities=26% Similarity=0.284 Sum_probs=27.1
Q ss_pred CCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 90 KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 90 ~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
..|.+|++||+|... +++.+.+.. +..+... -.+.++.||||.
T Consensus 33 ~~d~lvflGD~IDRG--p~S~~vl~~-l~~l~~~-~~~~~l~GNHE~ 75 (222)
T cd07413 33 PERQVVFLGDLIDRG--PEIRELLEI-VKSMVDA-GHALAVMGNHEF 75 (222)
T ss_pred CCCEEEEeCcccCCC--CCHHHHHHH-HHHhhcC-CCEEEEEccCcH
Confidence 468999999965543 334444433 3323222 268999999996
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00072 Score=61.85 Aligned_cols=69 Identities=19% Similarity=0.203 Sum_probs=40.0
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh------cCCCEEEEcCCccCCCChhhHHHHHHHHHh
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA------EKPDLIVFTGDNIFGFDATDAAKSLNAAFA 118 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~------~~pD~vv~~GDli~~~~~~~~~~~~~~~l~ 118 (402)
++++|+|+|-. ...++.+.+.+.. ...+.+|++||++.... +..+.+. .+.
T Consensus 3 ~iyaIGDIHG~--------------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP--dS~eVld-~L~ 59 (304)
T cd07421 3 VVICVGDIHGY--------------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP--ETRKVID-FLI 59 (304)
T ss_pred eEEEEEeccCC--------------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC--CHHHHHH-HHH
Confidence 68999999943 2333444444432 23578999999655432 3333332 222
Q ss_pred HhHhCC--CCEEEEcCCCCC
Q 015684 119 PAIASN--IPWVAVLGNHDQ 136 (402)
Q Consensus 119 ~~~~~~--iP~~~v~GNHD~ 136 (402)
.+.... ..++++.||||.
T Consensus 60 ~l~~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 60 SLPEKHPKQRHVFLCGNHDF 79 (304)
T ss_pred HhhhcccccceEEEecCChH
Confidence 222222 257899999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0022 Score=63.17 Aligned_cols=98 Identities=19% Similarity=0.153 Sum_probs=49.3
Q ss_pred ceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCC-hhHHHHHHHHHHhcCCCEE-EEcCCccCCCChhhHHH-
Q 015684 35 KLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSD-LNTTAFINRMISAEKPDLI-VFTGDNIFGFDATDAAK- 111 (402)
Q Consensus 35 ~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~pD~v-v~~GDli~~~~~~~~~~- 111 (402)
.++-...+..+|.|.||+|-.-....+-.+ ...++.+ ......+.+.++...+|++ +=+||+-.+.+..+.+.
T Consensus 34 ii~~~~~~~~nf~hTtdthG~~~~h~~~~~----~~~~~G~f~~f~~~~k~~a~~~~~dvl~~dtGD~hdGtg~sd~~~~ 109 (602)
T KOG4419|consen 34 IIRHLNWGQPNFIHTTDTHGWLGSHLRDAR----YDADFGDFAAFALRMKELADRKGVDVLLVDTGDLHDGTGLSDATDP 109 (602)
T ss_pred heeccccccccceeeccccccccccccchh----hhhhhhhHHHHHHHHHHHHhccCCCEEEEecccccCCceeeeccCC
Confidence 344455689999999999977542111000 0011122 2233445555555678765 55799443333222111
Q ss_pred --HHHHHHhHhHhCCCCEEEEcCCCCCCCC
Q 015684 112 --SLNAAFAPAIASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 112 --~~~~~l~~~~~~~iP~~~v~GNHD~~~~ 139 (402)
.+...+..+... =..+.|||+++..
T Consensus 110 ~g~~t~~l~~~~~y---D~l~lGNHEl~~~ 136 (602)
T KOG4419|consen 110 PGIYTNFLFKMMPY---DILTLGNHELYQA 136 (602)
T ss_pred chHHHHHHHhcCcc---chhhhcchhhhhh
Confidence 112222222111 3457799998754
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00095 Score=64.33 Aligned_cols=81 Identities=15% Similarity=0.221 Sum_probs=51.9
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-----hcCCCEEEEcCCccCCCCh----------
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-----AEKPDLIVFTGDNIFGFDA---------- 106 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-----~~~pD~vv~~GDli~~~~~---------- 106 (402)
.+++++++||+|.|...-. .+....+.+.++ +.+..+++++||.+.+-+.
T Consensus 224 e~v~v~~isDih~GSk~F~---------------~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i 288 (481)
T COG1311 224 ERVYVALISDIHRGSKEFL---------------EDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVI 288 (481)
T ss_pred cceEEEEEeeeecccHHHH---------------HHHHHHHHHHhcCCcccccceEEEEEecccccccccccCccccccc
Confidence 5689999999999864321 111222333332 2356899999997765541
Q ss_pred ---hhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCC
Q 015684 107 ---TDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (402)
Q Consensus 107 ---~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~ 138 (402)
.++|+.+.+.|... -..+.+++.|||||...
T Consensus 289 ~di~~qy~~~A~~L~~v-p~~I~v~i~PGnhDa~r 322 (481)
T COG1311 289 ADIYEQYEELAEFLDQV-PEHIKVFIMPGNHDAVR 322 (481)
T ss_pred ccchHHHHHHHHHHhhC-CCCceEEEecCCCCccc
Confidence 13566666666532 24677999999999854
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0064 Score=54.42 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhh-hccc---CCCc--ccccCCcCCCCCCChHHHHHHHHcCC
Q 015684 217 QQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF-AYFD---QSNF--TGVRQEGISSASVNSGFFTTMVAAGD 290 (402)
Q Consensus 217 q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~-~~~~---~~~~--~G~~~~~~~~~~~~~~~l~~l~~~~~ 290 (402)
.+-|++..|.... ..++|+++|.|+-...+ .+.| ...+ .|.....+ .+......+...++-+|
T Consensus 254 slpwlk~dl~~~a----------adgrpv~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphw-w~a~er~all~~lqGYN 322 (392)
T COG5555 254 SLPWLKVDLIYSA----------ADGRPVYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHW-WPAPERGALLFFLQGYN 322 (392)
T ss_pred cCcceeccceeec----------cCCCceeehhhhCccceeccccCchhcccccCCCCCCCC-CCCCCcchHHHhhcCce
Confidence 4678887765332 37899999999954322 2222 1111 11111111 12223344555567789
Q ss_pred eeEEEeccCCCC
Q 015684 291 VKAVFTGHDHVN 302 (402)
Q Consensus 291 v~~v~~GH~H~~ 302 (402)
|...|+||.|.-
T Consensus 323 vvg~fhGhkhd~ 334 (392)
T COG5555 323 VVGTFHGHKHDF 334 (392)
T ss_pred eEEecccccccc
Confidence 999999999974
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.044 Score=49.46 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCCh-HHHHHHHHcCCeeEEEe
Q 015684 218 QFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNS-GFFTTMVAAGDVKAVFT 296 (402)
Q Consensus 218 ~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~l~~l~~~~~v~~v~~ 296 (402)
.+-+++.++++++ ....+|+.+|...... ..|.... ++...+++. ++++|+.
T Consensus 161 ~~~~~~~i~~lr~----------~~D~vIv~~H~G~e~~----------------~~p~~~~~~la~~l~~~-G~D~IiG 213 (239)
T cd07381 161 LERIAADIAEAKK----------KADIVIVSLHWGVEYS----------------YYPTPEQRELARALIDA-GADLVIG 213 (239)
T ss_pred HHHHHHHHHHHhh----------cCCEEEEEecCcccCC----------------CCCCHHHHHHHHHHHHC-CCCEEEc
Confidence 3446666666664 3567888888744110 0010111 233344454 5999999
Q ss_pred ccCCCCcccccCCCeeEEec
Q 015684 297 GHDHVNDFCGRLTGIQLCYG 316 (402)
Q Consensus 297 GH~H~~~~~~~~~gi~~~~~ 316 (402)
||.|...-.-.++|..++|+
T Consensus 214 ~H~Hv~q~~E~~~~~~I~YS 233 (239)
T cd07381 214 HHPHVLQGIEIYKGKLIFYS 233 (239)
T ss_pred CCCCcCCCeEEECCEEEEEc
Confidence 99999655555677777765
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.044 Score=49.47 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEec
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYG 316 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~ 316 (402)
++...+++. ++++|+.||.|.......++|..+.|+
T Consensus 196 ~~A~~l~~~-G~DvIiG~H~H~~~~~e~~~~~~I~Ys 231 (239)
T smart00854 196 ELAHALIDA-GADVVIGHHPHVLQPIEIYKGKLIAYS 231 (239)
T ss_pred HHHHHHHHc-CCCEEEcCCCCcCCceEEECCEEEEEc
Confidence 334455554 599999999998655555677776664
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0031 Score=60.08 Aligned_cols=24 Identities=8% Similarity=0.216 Sum_probs=21.3
Q ss_pred CCChHHHHHHHHcCCeeEEEeccC
Q 015684 276 SVNSGFFTTMVAAGDVKAVFTGHD 299 (402)
Q Consensus 276 ~~~~~~l~~l~~~~~v~~v~~GH~ 299 (402)
.-+.+.++.++++.++++++=||.
T Consensus 270 ~FG~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 270 LWGPDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCC
Confidence 346788999999999999999999
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.025 Score=50.62 Aligned_cols=68 Identities=18% Similarity=0.280 Sum_probs=44.0
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
+..|++-+||+|--... +. +-..-|+++++|| .+.-+..++...+.+.+-.+
T Consensus 60 ~~~r~VcisdtH~~~~~-----------------------i~---~~p~gDvlihagd-fT~~g~~~ev~~fn~~~gsl- 111 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD-----------------------IN---DIPDGDVLIHAGD-FTNLGLPEEVIKFNEWLGSL- 111 (305)
T ss_pred CceEEEEecCcccccCc-----------------------cc---cCCCCceEEeccC-CccccCHHHHHhhhHHhccC-
Confidence 56899999999953321 11 2356699999999 77766665555554444321
Q ss_pred hCCCCEEEEcCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQES 138 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~ 138 (402)
...--++|.|||+..-
T Consensus 112 -ph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 112 -PHEYKIVIAGNHELTF 127 (305)
T ss_pred -cceeeEEEeeccceee
Confidence 1112568899999854
|
|
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.059 Score=48.17 Aligned_cols=54 Identities=22% Similarity=0.420 Sum_probs=35.7
Q ss_pred HhcCCCEEEEcCCccCCCCh------------------hhHHHHHHH---------HHhHhHhCCCCEEEEcCCCCCCCC
Q 015684 87 SAEKPDLIVFTGDNIFGFDA------------------TDAAKSLNA---------AFAPAIASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 87 ~~~~pD~vv~~GDli~~~~~------------------~~~~~~~~~---------~l~~~~~~~iP~~~v~GNHD~~~~ 139 (402)
.+.+||++|++||.|+.+.. ....+.+.+ .++.+ ...+|++.++-+||+..+
T Consensus 26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~-~~~~p~~~iwDDHDi~~n 104 (228)
T cd07389 26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRL-LAQVPTIGIWDDHDIGDN 104 (228)
T ss_pred cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHH-hhcCCEEEeccccccccc
Confidence 46899999999999999852 111111111 12222 257899999999999765
Q ss_pred CC
Q 015684 140 LS 141 (402)
Q Consensus 140 ~~ 141 (402)
..
T Consensus 105 ~~ 106 (228)
T cd07389 105 WG 106 (228)
T ss_pred cc
Confidence 43
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.011 Score=54.43 Aligned_cols=72 Identities=18% Similarity=0.157 Sum_probs=41.6
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
.++++++|+|-. ...+..+.+.+.....+-+++.||++ +.|. ...+.+...+.-....
T Consensus 28 ~~i~vvGDiHG~--------------------~~~l~~ll~~~~~~~~~~~vfLGD~V-DrG~-~s~e~l~~l~~lk~~~ 85 (271)
T smart00156 28 APVTVCGDIHGQ--------------------FDDLLRLFDLNGPPPDTNYVFLGDYV-DRGP-FSIEVILLLFALKILY 85 (271)
T ss_pred CCEEEEEeCcCC--------------------HHHHHHHHHHcCCCCCceEEEeCCcc-CCCC-ChHHHHHHHHHHHhcC
Confidence 468999999942 12222233333335668999999955 4442 2333433322211123
Q ss_pred CCCEEEEcCCCCCC
Q 015684 124 NIPWVAVLGNHDQE 137 (402)
Q Consensus 124 ~iP~~~v~GNHD~~ 137 (402)
.-.++.+.||||..
T Consensus 86 p~~v~llrGNHE~~ 99 (271)
T smart00156 86 PNRVVLLRGNHESR 99 (271)
T ss_pred CCCEEEEeccccHH
Confidence 34589999999984
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0029 Score=55.91 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=40.9
Q ss_pred EEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH----hcCCCEEEEcCCccCCCChhh-------HH---H
Q 015684 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS----AEKPDLIVFTGDNIFGFDATD-------AA---K 111 (402)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~----~~~pD~vv~~GDli~~~~~~~-------~~---~ 111 (402)
|+++||+|++... ...+.+.+.+. +.+|+.+|++|+++....... .+ .
T Consensus 1 Iv~~Sg~~~~~~~------------------~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~ 62 (209)
T PF04042_consen 1 IVFASGPFLDSDN------------------LSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEE 62 (209)
T ss_dssp EEEEES--CTTT-------------------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHH
T ss_pred CEEEecCccCCCH------------------hHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccH
Confidence 6899999998432 22344555554 567999999999776543221 11 1
Q ss_pred HHHHHHhHhH---hCCCCEEEEcCCCCCCCC
Q 015684 112 SLNAAFAPAI---ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 112 ~~~~~l~~~~---~~~iP~~~v~GNHD~~~~ 139 (402)
...+.+.... ...+++.++||+||....
T Consensus 63 ~~~~~~~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 63 DFLKELDSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHHCHHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHHHHHHHhhcccccEEEEeCCCcccccc
Confidence 1111111111 157899999999998644
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.051 Score=50.46 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=24.0
Q ss_pred CCChHHHHHHHHcCCeeEEEeccCCCCcccc
Q 015684 276 SVNSGFFTTMVAAGDVKAVFTGHDHVNDFCG 306 (402)
Q Consensus 276 ~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~ 306 (402)
..++..++.|++.-+..++|+.|.|. .|..
T Consensus 204 ~LGSp~~~eLL~~LkP~yWfsAHLH~-KFaA 233 (456)
T KOG2863|consen 204 KLGSPALEELLEDLKPQYWFSAHLHV-KFAA 233 (456)
T ss_pred CcCChHHHHHHHHhCcchhhhhhHhh-HHhh
Confidence 35677788888888899999999998 5543
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.016 Score=54.10 Aligned_cols=25 Identities=4% Similarity=0.150 Sum_probs=21.4
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~ 301 (402)
-+....+.++++.++++++-||.=.
T Consensus 220 fG~~~~~~Fl~~n~l~~iiR~He~~ 244 (305)
T cd07416 220 YSYRAVCEFLQKNNLLSIIRAHEAQ 244 (305)
T ss_pred cCHHHHHHHHHHcCCeEEEEecccc
Confidence 3567889999999999999999855
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.32 Score=43.54 Aligned_cols=164 Identities=20% Similarity=0.188 Sum_probs=73.5
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQV 159 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
+.+.++.++.++||||..|.+.++... -..+.+.+++ +.++-+ ++.|||=+.. .++.+++...+.-+...
T Consensus 17 ~~Lp~L~~~~~~DfVIaNgENaa~G~G-it~~~~~~L~----~~GvDv-iT~GNH~wdk----kei~~~i~~~~~ilRPa 86 (253)
T PF13277_consen 17 EHLPELKEEYGIDFVIANGENAAGGFG-ITPKIAEELF----KAGVDV-ITMGNHIWDK----KEIFDFIDKEPRILRPA 86 (253)
T ss_dssp HHHHHHGG--G-SEEEEE-TTTTTTSS---HHHHHHHH----HHT-SE-EE--TTTTSS----TTHHHHHHH-SSEE--T
T ss_pred HHHHHHHhhcCCCEEEECCcccCCCCC-CCHHHHHHHH----hcCCCE-EecCcccccC----cHHHHHHhcCCCcEECC
Confidence 344444456799999999997665532 2222333333 467775 4789997643 34556665544433222
Q ss_pred C-CCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccc
Q 015684 160 N-PSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAA 238 (402)
Q Consensus 160 ~-p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~ 238 (402)
+ |. ...|.|+..++..+ ..+-.++-....-.+. +. .-...+++.+++++.
T Consensus 87 N~p~---~~pG~G~~i~~~~g-----------~kv~ViNl~Gr~fm~~------~~-~PF~~~d~~l~~l~~-------- 137 (253)
T PF13277_consen 87 NYPP---GTPGRGYRIFEKNG-----------KKVAVINLMGRVFMPP------ID-CPFRAADRLLEELKE-------- 137 (253)
T ss_dssp TS-T---T-SSBSEEEEEETT-----------EEEEEEEEE--TTS---------S--HHHHHHHHHHH-----------
T ss_pred CCCC---CCCcCcEEEEEECC-----------EEEEEEECcccccCCC------CC-ChHHHHHHHHHhccc--------
Confidence 2 22 24455666666644 3444444311111111 11 234446666666643
Q ss_pred cCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCccccc
Q 015684 239 QKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR 307 (402)
Q Consensus 239 ~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~ 307 (402)
....+||=+|---.. | +.--.+.-.++|.+|+.=|+|.+.-..+
T Consensus 138 --~~~~iiVDFHAEaTS--------------E---------K~A~g~~lDGrvsaV~GTHTHVqTaDer 181 (253)
T PF13277_consen 138 --ETDIIIVDFHAEATS--------------E---------KQAMGWYLDGRVSAVVGTHTHVQTADER 181 (253)
T ss_dssp ----SEEEEEEE-S-HH--------------H---------HHHHHHHHBTTBSEEEEESSSS-BS--E
T ss_pred --cCCEEEEEeecCcHH--------------H---------HHHHHHHhCCcEEEEEeCCCCccCchhh
Confidence 455677777763311 0 1112233456899999999998654433
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.026 Score=52.95 Aligned_cols=25 Identities=4% Similarity=0.154 Sum_probs=21.6
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~ 301 (402)
-+.+....++++.++++++=||.=.
T Consensus 251 FG~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 251 FGPDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred cCHHHHHHHHHHCCCcEEEEcChhh
Confidence 4667889999999999999999854
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.027 Score=52.11 Aligned_cols=58 Identities=9% Similarity=0.094 Sum_probs=34.6
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCc-ccccCCCeeEEecCCccCC-CCCCCCCCcceEEEEEe
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHVND-FCGRLTGIQLCYGGGFGYH-AYGKAGWERRARVVVAS 339 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~~~-~~~~~~gi~~~~~~~~g~~-~y~~~~~~~g~rv~ei~ 339 (402)
-+...++.++++.++++++=||.-..+ +....+|.-+-.-.++.|. .+++ .+-++.++
T Consensus 212 fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n-----~~a~l~i~ 271 (285)
T cd07415 212 FGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGN-----VASIMELD 271 (285)
T ss_pred cCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCc-----eEEEEEEC
Confidence 466888999999999999999996522 2233344322222344453 2232 34466666
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.027 Score=52.28 Aligned_cols=25 Identities=12% Similarity=0.263 Sum_probs=21.9
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~ 301 (402)
-+...+++++++.++++++-||.=.
T Consensus 220 fg~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 220 FGKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred cCHHHHHHHHHHcCCeEEEECCccc
Confidence 4668889999999999999999965
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.032 Score=52.30 Aligned_cols=25 Identities=8% Similarity=0.234 Sum_probs=22.0
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~ 301 (402)
-+...++.++++.++++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 4668889999999999999999866
|
|
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.1 Score=47.78 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=50.2
Q ss_pred cCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--------CCCEEEEcCCccCCC-----C
Q 015684 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--------KPDLIVFTGDNIFGF-----D 105 (402)
Q Consensus 39 ~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--------~pD~vv~~GDli~~~-----~ 105 (402)
+++...+|+++||+|++. .++++.+.+++... .|-.+|+.|+..... .
T Consensus 23 ~~~~~~~~VilSDV~LD~-------------------p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~ 83 (291)
T PTZ00235 23 KNDKRHNWIIMHDVYLDS-------------------PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRN 83 (291)
T ss_pred cCCCceEEEEEEeeccCC-------------------HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCC
Confidence 345679999999999975 34566666666543 288999999944332 1
Q ss_pred hhhHHHHHHHHHhH-----h--HhCCCCEEEEcCCCCCCC
Q 015684 106 ATDAAKSLNAAFAP-----A--IASNIPWVAVLGNHDQES 138 (402)
Q Consensus 106 ~~~~~~~~~~~l~~-----~--~~~~iP~~~v~GNHD~~~ 138 (402)
....|+.-.+.+.. + +....-+++|||-.|-+.
T Consensus 84 ~~~~yk~~Fd~La~llls~fp~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 84 FHKVYIKGFEKLSVMLISKFKLILEHCYLIFIPGINDPCA 123 (291)
T ss_pred chHHHHHHHHHHHHHHHHhChHHHhcCeEEEECCCCCCCc
Confidence 11223222222222 1 123567999999999753
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.059 Score=50.25 Aligned_cols=25 Identities=12% Similarity=0.202 Sum_probs=21.8
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~ 301 (402)
-+...++.++++.++++++=||.=.
T Consensus 213 fg~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 213 FGAKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred cCHHHHHHHHHHCCCcEEEEcChhh
Confidence 4668889999999999999999866
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.04 Score=51.16 Aligned_cols=25 Identities=8% Similarity=0.230 Sum_probs=21.8
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~ 301 (402)
-+....+.++++.++++++=||.-.
T Consensus 222 fg~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 222 FGEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred cCHHHHHHHHHHcCCcEEEEcCccc
Confidence 4667889999999999999999965
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.30 E-value=1.2 Score=39.66 Aligned_cols=106 Identities=22% Similarity=0.330 Sum_probs=58.5
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++.|+=-..+.. -....+..+-.+.++||||..|-..++.. --.++.+.+. .+.
T Consensus 1 mriLfiGDvvGk~Gr~-----------------~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~-Git~k~y~~l----~~~ 58 (266)
T COG1692 1 MRILFIGDVVGKPGRK-----------------AVKEHLPQLKSKYKIDFVIVNGENAAGGF-GITEKIYKEL----LEA 58 (266)
T ss_pred CeEEEEecccCcchHH-----------------HHHHHhHHHHHhhcCcEEEEcCccccCCc-CCCHHHHHHH----HHh
Confidence 6899999986544321 12233444445679999999999655542 2222333333 346
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccC-CCCCccccccccceEEecc
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN-PSDAHIIDGFGNYNLEIGG 179 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~g~~~y~~~~~~ 179 (402)
++-+ ++.|||=.. ..++.+++....+-+...+ |.. ..|.|+..+...+
T Consensus 59 G~dv-iT~GNH~wd----~~ei~~~i~~~~~ilRP~N~p~~---~~G~G~~~f~~ng 107 (266)
T COG1692 59 GADV-ITLGNHTWD----QKEILDFIDNADRILRPANYPDG---TPGKGSRIFKING 107 (266)
T ss_pred CCCE-Eeccccccc----chHHHHHhhcccceeccCCCCCC---CCcceEEEEEeCC
Confidence 7764 578999753 3445555544433222222 222 4455655555544
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.091 Score=49.34 Aligned_cols=58 Identities=7% Similarity=0.178 Sum_probs=35.4
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCc-ccccCCCeeEEecCCccCC-CCCCCCCCcceEEEEEe
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHVND-FCGRLTGIQLCYGGGFGYH-AYGKAGWERRARVVVAS 339 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~~~-~~~~~~gi~~~~~~~~g~~-~y~~~~~~~g~rv~ei~ 339 (402)
-+.+.+..++++.++++++-||.=..+ +....+|.-+..-.++.|. .+++ ..-++.|+
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N-----~ga~~~i~ 290 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGN-----KGAFIRIT 290 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCc-----ceEEEEEe
Confidence 356788999999999999999996532 3233445333223345553 2333 24466676
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.13 Score=48.35 Aligned_cols=58 Identities=12% Similarity=0.233 Sum_probs=35.3
Q ss_pred CChHHHHHHHHcCCeeEEEeccC-CCCcccccCCCeeEEecCCccCC-CCCCCCCCcceEEEEEe
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHD-HVNDFCGRLTGIQLCYGGGFGYH-AYGKAGWERRARVVVAS 339 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~-H~~~~~~~~~gi~~~~~~~~g~~-~y~~~~~~~g~rv~ei~ 339 (402)
-+...++.++++.++++++=||. +...+....+|--+..-.++.|. .+++ ..-++.++
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n-----~~ai~~i~ 299 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGN-----AGAILVLG 299 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCc-----eEEEEEEC
Confidence 45678899999999999999998 33334433445322222344453 2333 34566665
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=94.62 E-value=1.7 Score=39.47 Aligned_cols=74 Identities=12% Similarity=0.143 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCC-ChHHHHHHHHcCCeeEE
Q 015684 216 SQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV-NSGFFTTMVAAGDVKAV 294 (402)
Q Consensus 216 ~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~l~~l~~~~~v~~v 294 (402)
.+++.+.+.++++++ ....+|++.|.-..-. ..|.. ..++...+++.+ +++|
T Consensus 168 ~~~~~i~~~i~~~r~----------~~D~vIv~~HwG~e~~----------------~~p~~~q~~~a~~lidaG-aDiI 220 (250)
T PF09587_consen 168 PGIERIKEDIREARK----------KADVVIVSLHWGIEYE----------------NYPTPEQRELARALIDAG-ADII 220 (250)
T ss_pred chHHHHHHHHHHHhc----------CCCEEEEEeccCCCCC----------------CCCCHHHHHHHHHHHHcC-CCEE
Confidence 345778888777763 5678999999843110 00111 124556677765 9999
Q ss_pred EeccCCCCcccccCCCeeEEec
Q 015684 295 FTGHDHVNDFCGRLTGIQLCYG 316 (402)
Q Consensus 295 ~~GH~H~~~~~~~~~gi~~~~~ 316 (402)
+.+|-|.-.-.-.+++..+.|+
T Consensus 221 iG~HpHv~q~~E~y~~~~I~YS 242 (250)
T PF09587_consen 221 IGHHPHVIQPVEIYKGKPIFYS 242 (250)
T ss_pred EeCCCCcccceEEECCEEEEEe
Confidence 9999999655556677777765
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.17 Score=41.04 Aligned_cols=71 Identities=20% Similarity=0.226 Sum_probs=47.3
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccc-cCCCeeEEecCCccCCCCCCCC---CCcceEEEEEeeccccccCCCcccceE
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCG-RLTGIQLCYGGGFGYHAYGKAG---WERRARVVVASLEKTEKRGWGDVKSIK 355 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~-~~~gi~~~~~~~~g~~~y~~~~---~~~g~rv~ei~~~~~~~~~~~~~~~~~ 355 (402)
+.++.|.+.-+|+..+.||+|. +.. ..+| .++.+|+|+-|+|+... ..|.+-+.+|+- ....
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~--f~Aye~eg-~ffvnPGSaTGAfn~~~t~~~~PSFvLmDiqg-----------~~~v 162 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHK--FEAYEHEG-KFFVNPGSATGAFNVSDTDIIVPSFVLMDIQG-----------STVV 162 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCcee--EEEEEeCC-cEEeCCCcccCCCcccccCCCCCceEEEEecC-----------CEEE
Confidence 5567788888999999999998 433 3445 45556667667776432 457777777762 4566
Q ss_pred EE-EEcCCCC
Q 015684 356 TW-KRLDDEH 364 (402)
Q Consensus 356 tw-~r~~~~~ 364 (402)
+| -|+-+++
T Consensus 163 ~YvY~lidge 172 (183)
T KOG3325|consen 163 TYVYRLIDGE 172 (183)
T ss_pred EEEeeeeCCc
Confidence 66 4555554
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.087 Score=43.70 Aligned_cols=44 Identities=30% Similarity=0.334 Sum_probs=31.7
Q ss_pred cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCC
Q 015684 89 EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135 (402)
Q Consensus 89 ~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD 135 (402)
.+.|++|+.|| +....... ..+.+.+..-....+|.|++-|||+
T Consensus 25 gpFd~~ic~Gd-ff~~~~~~--~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 25 GPFDALLCVGD-FFGDDEDD--EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CCeeEEEEecC-ccCCccch--hhHHHHhcCCccCCCCEEEECCCCC
Confidence 47799999999 54443222 3455556655567899999999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >COG2949 SanA Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=84.92 E-value=1.8 Score=37.38 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIP 126 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP 126 (402)
+...++.+..+++.++++||+- ..+|.+-..+.+.+.+.|+|
T Consensus 83 ~aA~~ly~~gKV~~LLlSGDN~-----~~sYnEp~tM~kdL~~~GVp 124 (235)
T COG2949 83 DAAIALYKAGKVNYLLLSGDNA-----TVSYNEPRTMRKDLIAAGVP 124 (235)
T ss_pred HHHHHHHhcCCeeEEEEecCCC-----cccccchHHHHHHHHHcCCC
Confidence 3344455567999999999943 23344444555556678998
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=80.78 E-value=3.2 Score=39.64 Aligned_cols=60 Identities=27% Similarity=0.330 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEc-CC--CCCCCCCCHHHHHH
Q 015684 78 TTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVL-GN--HDQESTLSREGVMK 147 (402)
Q Consensus 78 ~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~-GN--HD~~~~~~~~~~~~ 147 (402)
.+..+.+++.+.+||+|++.|| - ++.+...+... ..+||+..+- |. +|...+...+....
T Consensus 55 ~~~~~~~~~~~~~Pd~Vlv~GD-~--------~~~la~alaA~-~~~ipv~HieaGlRs~d~~~g~~de~~R~ 117 (346)
T PF02350_consen 55 AIIELADVLEREKPDAVLVLGD-R--------NEALAAALAAF-YLNIPVAHIEAGLRSGDRTEGMPDEINRH 117 (346)
T ss_dssp HHHHHHHHHHHHT-SEEEEETT-S--------HHHHHHHHHHH-HTT-EEEEES-----S-TTSSTTHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcC-C--------chHHHHHHHHH-HhCCCEEEecCCCCccccCCCCchhhhhh
Confidence 4566677777899999999999 2 23443344332 3699999886 52 34433344443333
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=80.21 E-value=12 Score=36.16 Aligned_cols=79 Identities=15% Similarity=0.271 Sum_probs=50.1
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh---cCCCEEEEcCCccCCCC-hhhHHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA---EKPDLIVFTGDNIFGFD-ATDAAKSLNAA 116 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~pD~vv~~GDli~~~~-~~~~~~~~~~~ 116 (402)
+..-+|+.+||+|++. ..+++.+.+.+.. ..|-++|+.|- .+... ...+-..+++-
T Consensus 280 ~~d~~fVfLSdV~LD~-------------------~~vm~aL~kifqgy~~~pP~~iIlcG~-FtS~p~~~~s~~~~k~~ 339 (525)
T KOG3818|consen 280 NTDTSFVFLSDVFLDD-------------------KKVMEALRKIFQGYKDAPPTAIILCGS-FTSSPRQTSSSDQLKDG 339 (525)
T ss_pred CcCceEEEEehhcccc-------------------HHHHHHHHHHHhhccCCCCeEEEEecc-ccccccccchHHHHHHH
Confidence 3457888889999974 4566667666664 46789999999 44442 22223333333
Q ss_pred HhHhHh---------CCCCEEEEcCCCCCCCC
Q 015684 117 FAPAIA---------SNIPWVAVLGNHDQEST 139 (402)
Q Consensus 117 l~~~~~---------~~iP~~~v~GNHD~~~~ 139 (402)
+..+.+ .+..+++|||=.|-+..
T Consensus 340 f~~LA~~l~~~~~~~ekT~fIFVPGP~Dp~~~ 371 (525)
T KOG3818|consen 340 FRWLAAQLTCFRKDYEKTQFIFVPGPNDPWVD 371 (525)
T ss_pred HHHHHhhccccccccccceEEEecCCCCCCcC
Confidence 332221 24569999999998653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 402 | |||
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 1e-22 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 2e-15 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 4e-13 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 2e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 5e-06 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 2e-05 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 4e-04 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 5e-04 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 5e-04 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 9e-04 |
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 98.0 bits (243), Expect = 1e-22
Identities = 49/317 (15%), Positives = 103/317 (32%), Gaps = 44/317 (13%)
Query: 2 MVHRKKKPALVIVAVLTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFA------ 55
M+ K +++++ + C + A ++ ++ ++ D+H+
Sbjct: 1 MIRFFKIVTPILLSISLVACSS---ASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTD 57
Query: 56 -NGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAA-KSL 113
+ + SD T AF+ + ++K D+++ +GD + + + L
Sbjct: 58 NGKAFEKYVAAGDGKQLAYSDEITDAFL-ADVESKKTDVLIISGDLT--NNGEKTSHEEL 114
Query: 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNY 173
+ V GNHD + +R+ + ++P+D I Y
Sbjct: 115 AKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDK----QLPTDTISPTDFSKIYSDFGY 170
Query: 174 NLEIGGVKGSG---FENKSVLNLYFLDSGDYSTVPSV---PGYGWIKPSQQFWFEQTSAR 227
I + S S + L LD+ Y T G + W +++SA
Sbjct: 171 EDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSAL 230
Query: 228 LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVA 287
A+K A + H L + N + I+ + +
Sbjct: 231 ----------AKKNGAKLIPVLHHNLTDH------NDVIQKGYTIN----YNQQVIDALT 270
Query: 288 AGDVKAVFTGHDHVNDF 304
G + +GH H +
Sbjct: 271 EGAMDFSLSGHIHTQNI 287
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 75.8 bits (185), Expect = 2e-15
Identities = 47/337 (13%), Positives = 88/337 (26%), Gaps = 53/337 (15%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFG 103
F +AD+ +A+ + + S + E+ +V GD I G
Sbjct: 6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAV-LQWRRERVQCVVQLGDIIDG 64
Query: 104 FDATDAA--KSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL----- 156
+ A ++L+ A A ++ V GNH+ + + + + + T
Sbjct: 65 HNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGS 124
Query: 157 ----------SQVNPSDAHIIDGFGNYNLEIGGVKGSG-------FENKSVLNLYFLDSG 199
+ + IG + S + NL L+
Sbjct: 125 DLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLP 184
Query: 200 DYSTVPS---VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF 256
S V G Q W + + L++ H+P+
Sbjct: 185 PVSVGLEQRFVKFNGGFSEQQLQWLDAVLT----------LSDHKQERVLIFSHLPVHPC 234
Query: 257 AYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYG 316
A + + + V GHDH C +G Q
Sbjct: 235 AADPICLAWNHEA-----------VLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITL 283
Query: 317 GGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKS 353
G + ++ +G G V+
Sbjct: 284 EGVIETPPHSHAF----ATAYLYEDRMVMKGRGRVED 316
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 4e-13
Identities = 60/293 (20%), Positives = 89/293 (30%), Gaps = 76/293 (25%)
Query: 30 AKQERKLRFRQNGE--FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS 87
A E +LR ++ + +L ++D H G V +N+
Sbjct: 10 AYVEHRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADD----RLGELLEQLNQS-- 63
Query: 88 AEKPDLIVFTGDNIFGFDATDAA-KSLNAAFAPAIAS-NIPWVAVLGNHDQESTLSREGV 145
+PD IVFTGD AA + L P A V V+GNHD R
Sbjct: 64 GLRPDAIVFTGD--LADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHD-----DRA-- 114
Query: 146 MKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVP 205
L+ L PS + I G+ + LD+
Sbjct: 115 -----ELRKFLLDEAPSM-----APLDRVCMIDGL-----------RIIVLDT------- 146
Query: 206 SVPG--YGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL--PEFAYFDQ 261
SVPG +G I+ SQ W + A AP ++ H P
Sbjct: 147 SVPGHHHGEIRASQLGWLAEE------------LATPAPDGTILALHHPPIPSVLDMAVT 194
Query: 262 SNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
+ ++ DV+A+ GH H + GI +
Sbjct: 195 VELR------------DQAALGRVLRGTDVRAILAGHLHYS-TNATFVGIPVS 234
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 2e-11
Identities = 37/276 (13%), Positives = 72/276 (26%), Gaps = 73/276 (26%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF 104
+ ++D HF + + + ++ + + +N + E+PD +V +GD
Sbjct: 2 LLAHISDTHFRSRGEKLYGFIDVNA----ANADVVSQLNAL--RERPDAVVVSGDI---- 51
Query: 105 DATDAAKSLN-AAFAPAIAS-NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162
+ + + S N P + GNHD ++ Q
Sbjct: 52 --VNCGRPEEYQVARQILGSLNYPLYLIPGNHDDKALFLEY-------------LQPLCP 96
Query: 163 DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPG--YGWIKPSQQFW 220
++ L F+DS S G GW+ W
Sbjct: 97 QLGSDANNMRCAVDDFAT-----------RLLFIDS-------SRAGTSKGWLTDETISW 138
Query: 221 FEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL--PEFAYFDQSNFTGVRQEGISSASVN 278
E + P ++ H P A D +
Sbjct: 139 LEAQ------------LFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHR--------- 177
Query: 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
+ + +F GH+H + +
Sbjct: 178 --LLALVERFPSLTRIFCGHNHSL-TMTQYRQALIS 210
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 2e-07
Identities = 32/218 (14%), Positives = 63/218 (28%), Gaps = 54/218 (24%)
Query: 48 QVADMHFANGKTTPCLDVLPSQVAG--CSDLNTTAFINRMISAEKPDLIVFTGDN----- 100
+ + + + V C D+ ++S E+ D I+ + D
Sbjct: 10 ETGEHQYQYKDILS--VFEDAFVDNFDCKDVQD--MPKSILSKEEIDHIIMSKDAVSGTL 65
Query: 101 -IFGFDATDAAKSLNAAFAPAIASNIPWVA----------------------VLGNHDQE 137
+F + + + + N ++ L N +Q
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 138 ST---LSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLY 194
+SR + + L+ L ++ P+ N+ I GV GSG K+ + L
Sbjct: 126 FAKYNVSRL---QPYLKLRQALLELRPAK----------NVLIDGVLGSG---KTWVALD 169
Query: 195 FLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAY 232
S + W+ E LQ+
Sbjct: 170 VCLSYKVQCKMDFKIF-WLNLKNCNSPETVLEMLQKLL 206
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 5e-06
Identities = 41/275 (14%), Positives = 76/275 (27%), Gaps = 68/275 (24%)
Query: 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDN 100
+ + V D G ++A I + D I+ GDN
Sbjct: 4 TPILRFVAVGDW----GGVPNAPFHTAREMA------NAKAIATTVKTLGADFILSLGDN 53
Query: 101 I--FGFDATDAAK---SLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNT 155
G + + F+ N+PW + GNHD N
Sbjct: 54 FYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLG---------------NV 98
Query: 156 LSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG--------DYSTVPSV 207
+Q+ S I N+ ++ + + ++ LD+ S P
Sbjct: 99 SAQIAYSK---ISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPER 155
Query: 208 PGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGL-VYFHIPLPEFAYFDQSNFTG 266
P + +Q W ++ A + V H P+ ++ +
Sbjct: 156 PRNLALARTQLAWIKK-------------QLAAAKEDYVLVAGHYPV--WSIAEHGPTHC 200
Query: 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHV 301
+ ++ ++ V A GHDH
Sbjct: 201 LVKQ-----------LLPLLTTHKVTAYLCGHDHN 224
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* Length = 386 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 20/112 (17%)
Query: 38 FRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS---AEKPDLI 94
+ + +AD H G LD + I KPD++
Sbjct: 15 VPRGSHMMFVHIADNHL--GYRQYNLDDREKDIY--------DSFKLCIKKILEIKPDVV 64
Query: 95 VFTGDNIFGFDA----TDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSR 142
+ +GD F+ A + AF +NI V GNH+ L
Sbjct: 65 LHSGDL---FNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGE 113
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 4e-04
Identities = 37/301 (12%), Positives = 79/301 (26%), Gaps = 53/301 (17%)
Query: 69 QVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAF---APAIASNI 125
G + + T + ++ K ++F GD + + + + + +
Sbjct: 133 GDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ 192
Query: 126 PWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGF 185
PW+ GNH+ + + P +A Y ++
Sbjct: 193 PWIWTAGNHEIDYAPDIGEYQPFVPFTNRY---PTPHEASGSGDPLWYAIKRASAH---- 245
Query: 186 ENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQF-WFEQTSARLQRAYMSKPAAQKAPAP 244
+ L S G++K S Q+ WF ++ P
Sbjct: 246 -------IIVLSS----------YSGFVKYSPQYKWFTSELE----------KVNRSETP 278
Query: 245 -GLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVND 303
+V H PL +R F V VF+GH H +
Sbjct: 279 WLIVLVHAPLYNSYEAHYMEGEAMRAI-----------FEPYFVYYKVDIVFSGHVHSYE 327
Query: 304 FCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDE 363
R++ + ++ + + +E + ++ +
Sbjct: 328 RSERVSNVAYNIVNAKCTPVSDESAPV---YITIGDGGNSEGLASEMTQPQPSYSAFREA 384
Query: 364 H 364
Sbjct: 385 S 385
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 5e-04
Identities = 27/262 (10%), Positives = 51/262 (19%), Gaps = 74/262 (28%)
Query: 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGD 99
+ IL ++ DL ++ D I G+
Sbjct: 2 RRTVRYILATSNPMG--------------------DLEALEKFVKLAPDTGADAIALIGN 41
Query: 100 NIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD-QESTLSREGVMKHIVTLKNTLSQ 158
+ + + F +++P V G D RE +V
Sbjct: 42 LMPKAAKSRDYAAF---FRILSEAHLPTAYVPGPQDAPIWEYLREAANVELVH------- 91
Query: 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQ 218
+ + + G +G G P
Sbjct: 92 ---PEMRNVH--ETFTFWRGPYLVAGV-------------GGEIADEGEPEEH------- 126
Query: 219 FWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278
Y K + P + FH P ++ V
Sbjct: 127 --EALRYPAWVAEYRLKALWELKDYPKIFLFHTM-PYHKGLNEQGSHEVAH--------- 174
Query: 279 SGFFTTMVAAGDVKAVFTGHDH 300
++ + V
Sbjct: 175 ------LIKTHNPLLVLVAGKG 190
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C Length = 379 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 27/109 (24%)
Query: 45 KILQVADMHFANGKT----TPCLDVLPSQVAGCSDLNTTAFINRMIS---AEKPDLIVFT 97
KIL +D H G T + +D +++++ + DLI+ T
Sbjct: 2 KILHTSDWHL--GVTSWTSSRPVDRREELKK---------ALDKVVEEAEKREVDLILLT 50
Query: 98 GDNIFGFD-----ATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS 141
GD + + A L + P V + GN D +
Sbjct: 51 GD-LL--HSRNNPSVVALHDLLDYLK-RMMRTAPVVVLPGNQDWKGLKL 95
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A Length = 333 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 9e-04
Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 7/58 (12%)
Query: 88 AEKPDLIVFTGDNIFGFD----ATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS 141
E D I+ GD +F + K A +IP A+ GNHD+
Sbjct: 38 QENVDFILIAGD-LF--HSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGP 92
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 402 | |||
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.94 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.94 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.93 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.93 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.9 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.89 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.89 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.87 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.75 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.73 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.72 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.7 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.66 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.61 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.58 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.58 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.58 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.56 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.54 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.53 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.52 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.51 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.47 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.42 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.41 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.39 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.35 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 99.28 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 99.27 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.22 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.99 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.98 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.94 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.89 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.8 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.69 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.51 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.45 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 98.29 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.29 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.09 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.9 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.88 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.83 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.62 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 97.5 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.48 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.44 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.42 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.38 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 97.38 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 97.37 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 97.28 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.25 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.11 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.91 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 95.65 |
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.6e-26 Score=223.40 Aligned_cols=264 Identities=15% Similarity=0.164 Sum_probs=151.3
Q ss_pred CCcceeecCCCceEEEEEeccCCcCCCCCCCCCCCc----ccccCC--CChhHHHHHHHHHHhcCCCEEEEcCCccCCCC
Q 015684 32 QERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLP----SQVAGC--SDLNTTAFINRMISAEKPDLIVFTGDNIFGFD 105 (402)
Q Consensus 32 ~~~~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~ 105 (402)
.+.++.+.++++|||+|+||+|++............ ...+.. .....++.+.+.+++.+||+||++|| +.+.+
T Consensus 28 ~~~~~~~~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD-l~~~~ 106 (443)
T 2xmo_A 28 EKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGD-LTNNG 106 (443)
T ss_dssp -----CBCSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESC-CBSSC
T ss_pred ccccccccCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCC-CCCCC
Confidence 344566777889999999999997532100000000 000000 01234455555566789999999999 45555
Q ss_pred hhhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCC---------------HHHHHHHHHhcCCcccccCCCCCccccc-
Q 015684 106 ATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS---------------REGVMKHIVTLKNTLSQVNPSDAHIIDG- 169 (402)
Q Consensus 106 ~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~---------------~~~~~~~~~~~~~~~~~~~p~~~~~~~g- 169 (402)
....++.+.+.++.+...++|+++|+||||...... .+.+.+.+....+ ........
T Consensus 107 ~~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 179 (443)
T 2xmo_A 107 EKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGY-------EDAISSDEF 179 (443)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCC-------TTCSEECSS
T ss_pred CHHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcCh-------hhhhccCCC
Confidence 555566677777776556899999999999865432 1222222110000 00000000
Q ss_pred cccceEEeccCCCCCCCCceeEEEEEEeCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeE
Q 015684 170 FGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTV---PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGL 246 (402)
Q Consensus 170 ~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~---~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~i 246 (402)
...|.+...+ .++++++|+..+... ......|.++++|++||++.+++.++ .+.++|
T Consensus 180 ~~~y~~~~~~----------~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~----------~~~~~I 239 (443)
T 2xmo_A 180 SLSYLAAPSS----------KVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK----------NGAKLI 239 (443)
T ss_dssp SSCEEECSBS----------SEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH----------TTCEEE
T ss_pred CceEEEecCC----------CEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH----------cCCeEE
Confidence 1123322111 288999999754321 00113477899999999999987754 467899
Q ss_pred EEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCccccc--CCC--eeEEecCCccCC
Q 015684 247 VYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR--LTG--IQLCYGGGFGYH 322 (402)
Q Consensus 247 v~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~--~~g--i~~~~~~~~g~~ 322 (402)
+++|||+......+. .. ....+...+..++++++|+++|+||+|.+..... .+| +..+.+++.+.
T Consensus 240 v~~H~p~~~~~~~~~--------~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~- 308 (443)
T 2xmo_A 240 PVLHHNLTDHNDVIQ--------KG--YTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV- 308 (443)
T ss_dssp EECSSBSSCSSCC----------CC--SBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS-
T ss_pred EEECCCCcccccccc--------cc--cccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc-
Confidence 999999865322220 00 1123566677777777899999999999654321 233 34444443321
Q ss_pred CCCCCCCCcceEEEEEee
Q 015684 323 AYGKAGWERRARVVVASL 340 (402)
Q Consensus 323 ~y~~~~~~~g~rv~ei~~ 340 (402)
.++++++++++.
T Consensus 309 ------~p~~y~il~i~~ 320 (443)
T 2xmo_A 309 ------FPHKYGNITYSA 320 (443)
T ss_dssp ------TTCEEEEEEEET
T ss_pred ------CCCCeEEEEEeC
Confidence 247899999973
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.6e-25 Score=207.65 Aligned_cols=235 Identities=21% Similarity=0.236 Sum_probs=156.7
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCccCCCChhhHHHHHHHHHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFA 118 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~ 118 (402)
..+|||+++||+|++.......... .....++.+.+.+++ .+||+||++|| +++.+..+.++.+.+.++
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~--------~~~~~l~~~l~~i~~~~~~~d~vi~~GD-l~~~~~~~~~~~~~~~l~ 93 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAV--------DADDRLGELLEQLNQSGLRPDAIVFTGD-LADKGEPAAYRKLRGLVE 93 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTB--------CHHHHHHHHHHHHHHHTCCCSEEEECSC-CBTTCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCccccccc--------CHHHHHHHHHHHHHhcCCCCCEEEECCC-CCCCCCHHHHHHHHHHHH
Confidence 4689999999999976543211100 113344555555555 79999999999 556666677777888887
Q ss_pred HhHh-CCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEe
Q 015684 119 PAIA-SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLD 197 (402)
Q Consensus 119 ~~~~-~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lD 197 (402)
++.+ .++|+++|+||||.. ..+.+.+... . ...+..+|.+.+.+ ++++++|
T Consensus 94 ~l~~~~~~pv~~v~GNHD~~-----~~~~~~~~~~---------~---~~~~~~~~~~~~~~-----------~~~i~ld 145 (330)
T 3ib7_A 94 PFAAQLGAELVWVMGNHDDR-----AELRKFLLDE---------A---PSMAPLDRVCMIDG-----------LRIIVLD 145 (330)
T ss_dssp HHHHHHTCEEEECCCTTSCH-----HHHHHHHHCC---------C---CCCSCCCEEEEETT-----------EEEEECC
T ss_pred HHHhhcCCCEEEeCCCCCCH-----HHHHHHhccc---------c---cccCCcceEEEeCC-----------EEEEEec
Confidence 7643 589999999999972 2222222110 0 01122356777766 8899999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCC
Q 015684 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (402)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~ 277 (402)
+..+ +. ..+++..+|++||++.|++. .....|+++|||+......+ ... ....
T Consensus 146 s~~~----~~-~~~~~~~~q~~wl~~~l~~~------------~~~~~iv~~Hh~p~~~~~~~------~~~----~~~~ 198 (330)
T 3ib7_A 146 TSVP----GH-HHGEIRASQLGWLAEELATP------------APDGTILALHHPPIPSVLDM------AVT----VELR 198 (330)
T ss_dssp CCCT----TC-CSBCCCHHHHHHHHHHTTSC------------CTTCEEEECSSCSSCCSSGG------GGG----GSBS
T ss_pred CCCC----CC-CCCccCHHHHHHHHHHHHhc------------ccCCeEEEEECCCCCCCccc------ccc----cccc
Confidence 9642 21 36779999999999986532 34558999999775421111 000 1123
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCC--------CCCCCcceEEEEEee
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG--------KAGWERRARVVVASL 340 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~--------~~~~~~g~rv~ei~~ 340 (402)
+...+..+++.++++++++||+|.+ .....+|+.++.+++++++... .....+||++++++.
T Consensus 199 ~~~~l~~~l~~~~v~~v~~GH~H~~-~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~ 268 (330)
T 3ib7_A 199 DQAALGRVLRGTDVRAILAGHLHYS-TNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYP 268 (330)
T ss_dssp CHHHHHHHHTTSSEEEEEECSSSSC-EEEEETTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECS
T ss_pred CHHHHHHHHhccCceEEEECCCCCc-ccceECCEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEEC
Confidence 5677788888889999999999994 5667899999999888753221 112357899999973
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=202.62 Aligned_cols=268 Identities=17% Similarity=0.155 Sum_probs=152.7
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCC-ChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh---HHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCS-DLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD---AAKSLNAA 116 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~---~~~~~~~~ 116 (402)
+..|||+++||+|++...........+. ..+. ....++.+.+.+++.+||+||++||++. .+... ..+.+...
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~-~~~~~~~~~~~~~~~~ 79 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRR--RYYRGSADLLRDAVLQWRRERVQCVVQLGDIID-GHNRRRDASDRALDTV 79 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSE--ECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBC-THHHHTTCHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchH--HHHHHHHHHHHHHHHHHHhcCCCEEEECCCccC-CCCCcchHHHHHHHHH
Confidence 4679999999999986532110000000 0000 1123334444455579999999999554 43211 12333344
Q ss_pred HhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccc--cccccceEEe-ccCCCCCCCCceeEEE
Q 015684 117 FAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHII--DGFGNYNLEI-GGVKGSGFENKSVLNL 193 (402)
Q Consensus 117 l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~g~~~y~~~~-~~~~~~~~~~~~~~~l 193 (402)
++.+...++|+++++||||... ..++.+ ...+........+...... .+..+|.+.. .+ +++
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~-----------~~~ 144 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFYN-FSRPSL---LSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPN-----------FRF 144 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHHH-CCHHHH---HTSTTCCCC------CEECGGGTCCCEEEEEETT-----------EEE
T ss_pred HHHHHhcCCcEEEecCCCCccc-CCHHHH---hhhhCCcccccccccccccCCCCceEEEEecCCC-----------EEE
Confidence 4444446889999999999842 122222 1111110000000000001 1234566665 44 889
Q ss_pred EEEeCCCCCCC--------------------CC-----------------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCc
Q 015684 194 YFLDSGDYSTV--------------------PS-----------------VPGYGWIKPSQQFWFEQTSARLQRAYMSKP 236 (402)
Q Consensus 194 ~~lDs~~~~~~--------------------~~-----------------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~ 236 (402)
+++|+..++.. +. ....+.+.++|++||++.|++..+
T Consensus 145 i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~------ 218 (322)
T 2nxf_A 145 VLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH------ 218 (322)
T ss_dssp EECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH------
T ss_pred EEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh------
Confidence 99999754210 00 011367889999999999887653
Q ss_pred cccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcC-CeeEEEeccCCCCcccccCCCeeEEe
Q 015684 237 AAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCY 315 (402)
Q Consensus 237 ~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~ 315 (402)
.++++|+++|+|+...... .. ....+.+.+..+++++ +|+++||||+|.+......+|+.++.
T Consensus 219 ----~~~~~iv~~H~p~~~~~~~---------~~---~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~ 282 (322)
T 2nxf_A 219 ----KQERVLIFSHLPVHPCAAD---------PI---CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHIT 282 (322)
T ss_dssp ----HTCEEEEEESSCCCTTSSC---------GG---GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEE
T ss_pred ----cCCcEEEEEccCCCCCCCC---------cc---ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEE
Confidence 3568999999998653110 00 1112556677777776 79999999999965543378998887
Q ss_pred cCCccCCCCCCCCCCcceEEEEEeeccccccCCCcccceEEEEEcC
Q 015684 316 GGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361 (402)
Q Consensus 316 ~~~~g~~~y~~~~~~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~ 361 (402)
.+++.-.. .-.+++++++++.+ .-.+..|-|..
T Consensus 283 ~~~~~~~~----~~~~~y~~v~~~~~---------~~~~~~~~~~~ 315 (322)
T 2nxf_A 283 LEGVIETP----PHSHAFATAYLYED---------RMVMKGRGRVE 315 (322)
T ss_dssp CCCGGGCC----TTSCEEEEEEECSS---------EEEEEEEETSC
T ss_pred ecchhhCC----CCCCcEEEEEEECC---------eEEEEeccccC
Confidence 76653211 12578999999732 14566665444
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-23 Score=192.44 Aligned_cols=232 Identities=16% Similarity=0.184 Sum_probs=142.1
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
|||+++||+|++......... ......++.+.+.+++. +||+||++||+ .+.+....++.+.+.++.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~--------~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl-~~~~~~~~~~~~~~~l~~-- 69 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGF--------IDVNAANADVVSQLNALRERPDAVVVSGDI-VNCGRPEEYQVARQILGS-- 69 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTT--------BCHHHHHHHHHHHHHTCSSCCSEEEEESCC-BSSCCHHHHHHHHHHHTT--
T ss_pred CEEEEEecCCcCCCCcccccc--------cCHHHHHHHHHHHHHhcCCCCCEEEECCCC-CCCCCHHHHHHHHHHHHh--
Confidence 699999999998533211100 00122334444444443 68999999994 555555555555555553
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~ 201 (402)
.++|+++|+||||... .+.+.+... + ... .. ..+..+|.+...+ ++++++|+..+
T Consensus 70 -l~~p~~~v~GNHD~~~-----~~~~~~~~~-~--~~~--~~---~~~~~~~~~~~~~-----------~~~i~ld~~~~ 124 (274)
T 3d03_A 70 -LNYPLYLIPGNHDDKA-----LFLEYLQPL-C--PQL--GS---DANNMRCAVDDFA-----------TRLLFIDSSRA 124 (274)
T ss_dssp -CSSCEEEECCTTSCHH-----HHHHHHGGG-S--GGG--CS---CGGGCCEEECSSS-----------SEEEECCCCCT
T ss_pred -cCCCEEEECCCCCCHH-----HHHHHhhhh-h--cCc--cc---CCCceEEEEEeCC-----------EEEEEEeCCCC
Confidence 4789999999999832 122222111 0 000 00 0022345555443 88999999643
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHH
Q 015684 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281 (402)
Q Consensus 202 ~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 281 (402)
.. ..+.++++|++||++.|++. ++.++|+++|+|+......+ ... ....+...
T Consensus 125 ~~-----~~~~~~~~~~~wl~~~l~~~------------~~~~~iv~~H~p~~~~~~~~------~~~----~~~~~~~~ 177 (274)
T 3d03_A 125 GT-----SKGWLTDETISWLEAQLFEG------------GDKPATIFMHHPPLPLGNAQ------MDP----IACENGHR 177 (274)
T ss_dssp TC-----SSBCCCHHHHHHHHHHHHHH------------TTSCEEEEESSCSSCCSCTT------TGG----GSBTTTHH
T ss_pred CC-----CCCeeCHHHHHHHHHHHHhC------------CCCCEEEEECCCCcccCCcc------cCc----ccCcCHHH
Confidence 21 35678999999999997753 45689999999985422111 000 11134556
Q ss_pred HHHHHHcC-CeeEEEeccCCCCcccccCCCeeEEecCCccCCCC-C-------CCCCCcceEEEEEe
Q 015684 282 FTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAY-G-------KAGWERRARVVVAS 339 (402)
Q Consensus 282 l~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y-~-------~~~~~~g~rv~ei~ 339 (402)
+..+++++ +++++++||+|.. .....+|+.++.+++++.+.. . .....+|+++++++
T Consensus 178 l~~~l~~~~~v~~vl~GH~H~~-~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~ 243 (274)
T 3d03_A 178 LLALVERFPSLTRIFCGHNHSL-TMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQV 243 (274)
T ss_dssp HHHHHHHCTTEEEEEECSSSSC-EEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEE
T ss_pred HHHHHHhCCCceEEEeCCCCCc-hhheECCEEEEEcCCcceeeccCCCccccccccCCCceEEEEEe
Confidence 66777665 7999999999994 455678887777776654321 1 01235899999997
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-24 Score=200.07 Aligned_cols=271 Identities=17% Similarity=0.204 Sum_probs=155.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh-HHHHHHHHHhH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-AAKSLNAAFAP 119 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~-~~~~~~~~l~~ 119 (402)
+++|||+++||+|++....... . ....+.+.+.+++++.+||+||++||+++..+... ....+.+.+..
T Consensus 4 ~~~~~~~~isD~h~~~~~~~~~-~---------~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~ 73 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPFHT-A---------REMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFED 73 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTSSC-H---------HHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTT
T ss_pred CCceEEEEEcccCCCCCccccC-c---------hHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHH
Confidence 4789999999999875421000 0 01234566667677789999999999776543211 01123333333
Q ss_pred hH---hC-CCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEE
Q 015684 120 AI---AS-NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYF 195 (402)
Q Consensus 120 ~~---~~-~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~ 195 (402)
+. .. ++|+++++||||........ ..+ .. .. . +......+|.+.+.-.. ....+++++
T Consensus 74 ~~~~~~l~~~p~~~v~GNHD~~~~~~~~--~~~-~~-------~~-~--~~~~~~~~y~~~~~~~~-----~~~~~~~i~ 135 (313)
T 1ute_A 74 VFSDPSLRNVPWHVLAGNHDHLGNVSAQ--IAY-SK-------IS-K--RWNFPSPYYRLRFKIPR-----SNVSVAIFM 135 (313)
T ss_dssp TSCSGGGTTCCEEECCCHHHHHSCHHHH--HHG-GG-------TS-T--TEECCSSSEEEEEECTT-----SSCEEEEEE
T ss_pred HcCchhhcCCCEEEECCCCccCCCcccc--ccc-cc-------cC-C--CccCcccceEEEEecCC-----CCceEEEEE
Confidence 22 24 79999999999986543211 011 00 00 0 11112234555442100 001388999
Q ss_pred EeCCCCCCC--------CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccc
Q 015684 196 LDSGDYSTV--------PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGV 267 (402)
Q Consensus 196 lDs~~~~~~--------~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~ 267 (402)
|||..+... +.....+.+.++|++||++.|++. +.+++|+++|+|+...... +.
T Consensus 136 lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~------------~~~~~iv~~H~p~~~~~~~------~~ 197 (313)
T 1ute_A 136 LDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA------------KEDYVLVAGHYPVWSIAEH------GP 197 (313)
T ss_dssp CCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC------------CCSEEEEECSSCSSCCSSS------CC
T ss_pred EEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhC------------CCCeEEEEECCCCccCCCC------CC
Confidence 998542111 011124457889999999987642 4578999999998652110 00
Q ss_pred cCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCC-----------------CCCC
Q 015684 268 RQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK-----------------AGWE 330 (402)
Q Consensus 268 ~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~-----------------~~~~ 330 (402)
.. ...+.+..++++++|+++|+||+|........+|+.++.+|+.|...... ....
T Consensus 198 ~~-------~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (313)
T 1ute_A 198 TH-------CLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 270 (313)
T ss_dssp CH-------HHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSC
T ss_pred cH-------HHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEEECCCcCcCccccccccCCCcccceeccCcCCC
Confidence 00 01234566677778999999999986665557888888777766422110 0112
Q ss_pred cceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecC
Q 015684 331 RRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377 (402)
Q Consensus 331 ~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~ 377 (402)
+||.+++++.+ .-..++... ++ +++|..+|....
T Consensus 271 ~gy~~l~v~~~----------~~~~~~~~~-~g--~~~~~~~l~~~~ 304 (313)
T 1ute_A 271 GGFAYVEITPK----------EMSVTYIEA-SG--KSLFKTKLPRRA 304 (313)
T ss_dssp CEEEEEEECSS----------CEEEEEEET-TS--CEEEEEEECCCC
T ss_pred CceEEEEEEcC----------EEEEEEEcC-CC--cEEEEEEecccc
Confidence 68999998621 112233344 33 367777766544
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-23 Score=195.57 Aligned_cols=250 Identities=12% Similarity=0.040 Sum_probs=141.8
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh----hH-HHHHHHH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT----DA-AKSLNAA 116 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~----~~-~~~~~~~ 116 (402)
.+++|++++|+|.+... .....+.|.+++++.+|||||++||+++. +.. .. .+.+.+.
T Consensus 2 ~~l~f~~igD~g~g~~~----------------q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~ 64 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKG----------------QILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDV 64 (342)
T ss_dssp CCEEEEECCSCBSCCHH----------------HHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTT
T ss_pred ceEEEEEEecCCCCCch----------------HHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHH
Confidence 47899999999976321 23456778888888999999999997777 431 11 1222233
Q ss_pred HhHh-HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcc-------c--ccCCCCCccccccccceEEe--ccCCCCC
Q 015684 117 FAPA-IASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL-------S--QVNPSDAHIIDGFGNYNLEI--GGVKGSG 184 (402)
Q Consensus 117 l~~~-~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~-------~--~~~p~~~~~~~g~~~y~~~~--~~~~~~~ 184 (402)
+... ...++||++|+||||...+... ++ +... ..+.. . .......++.....+|.+.. .-..+..
T Consensus 65 ~~~~~~~~~~P~~~vlGNHD~~~~~~a-q~-~~~~-~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~ 141 (342)
T 3tgh_A 65 YSEEKGDMYMPFFTVLGTRDWTGNYNA-QL-LKGQ-GIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPS 141 (342)
T ss_dssp SCCGGGTTCSEEEECCCHHHHTSCHHH-HH-HHHH-C---------------CCCSSCEEECSSSSEEEEEEEEEC----
T ss_pred hhhhhhhhCCCEEEeCCCCccCCCchH-hh-hhhh-cccccccccccccccccccCCCCccCCcceEEEEEEeecccccc
Confidence 3222 2368999999999999765422 11 1111 00000 0 00011112222223444311 1000000
Q ss_pred CC----CceeEEEEEEeCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcc
Q 015684 185 FE----NKSVLNLYFLDSGDYSTVPSVP-GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYF 259 (402)
Q Consensus 185 ~~----~~~~~~l~~lDs~~~~~~~~~~-~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~ 259 (402)
+. ....+++++|||.......... ..+...++|++||++.|+ ..+++||++|||++.....
T Consensus 142 ~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~--------------~~~~~IV~~HhP~~~~~~~ 207 (342)
T 3tgh_A 142 IVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKK--------------IADFIIVVGDQPIYSSGYS 207 (342)
T ss_dssp -----CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHH--------------HCSEEEEECSSCSSCSSTT
T ss_pred ccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhc--------------cCCcEEEEECCCCCCCCCC
Confidence 00 1123899999996543211000 001244689999999973 2468999999999653110
Q ss_pred cCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCC---C------CCC
Q 015684 260 DQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK---A------GWE 330 (402)
Q Consensus 260 ~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~---~------~~~ 330 (402)
+.. . ...+.+..|+++++|+++|+||+|.... ...+|+.++.+|+.|...... . .-.
T Consensus 208 ------~~~-~------~l~~~l~~ll~~~~VdlvlsGH~H~~~~-~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~ 273 (342)
T 3tgh_A 208 ------RGS-S------YLAYYLLPLLKDAEVDLYISGHDNNMEV-IEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSD 273 (342)
T ss_dssp ------CCC-H------HHHHHTHHHHHHTTCCEEEECSSSSEEE-EEETTEEEEEECCSSCCCCCCSSCCTTEEEEECS
T ss_pred ------CCc-H------HHHHHHHHHHHHcCCCEEEECCCcceeE-EeeCCcEEEEeCccccccccCCCCCCcceeecCC
Confidence 000 0 0135567788888999999999999544 345788877776665322211 1 124
Q ss_pred cceEEEEEe
Q 015684 331 RRARVVVAS 339 (402)
Q Consensus 331 ~g~rv~ei~ 339 (402)
.|+.+++++
T Consensus 274 ~Gf~~l~v~ 282 (342)
T 3tgh_A 274 IGFCVHELS 282 (342)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEEE
Confidence 688999986
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-22 Score=193.97 Aligned_cols=261 Identities=15% Similarity=0.174 Sum_probs=155.2
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCCh----hhHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDA----TDAAKSLNA 115 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~----~~~~~~~~~ 115 (402)
...+||+++||+|.+.. ....+..+.+. .+||+||++||+++..+. ...++.+.+
T Consensus 124 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~ 183 (426)
T 1xzw_A 124 DVPYVFGLIGDIGQTHD--------------------SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGR 183 (426)
T ss_dssp TCCEEEEEECSCTTBHH--------------------HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCc--------------------hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHH
Confidence 46799999999997521 11233333333 399999999997765442 234555666
Q ss_pred HHhHhHhCCCCEEEEcCCCCCCCCCC---HHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEE
Q 015684 116 AFAPAIASNIPWVAVLGNHDQESTLS---REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN 192 (402)
Q Consensus 116 ~l~~~~~~~iP~~~v~GNHD~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~ 192 (402)
.++++. ..+|+++++||||...... .+.+..+...+. .|.......+..+|++..++ ++
T Consensus 184 ~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~------~p~~~~~~~~~~~ys~~~g~-----------~~ 245 (426)
T 1xzw_A 184 FSERSV-AYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYP------TPHEASGSGDPLWYAIKRAS-----------AH 245 (426)
T ss_dssp HHHHHH-TTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSC------CCCGGGTCSSTTSEEEEETT-----------EE
T ss_pred HHHHHH-hcCCEEEeccccccccCCccccccCChhheEEEe------CCcccCCCCCCCeEEEEECC-----------EE
Confidence 777654 4899999999999875321 001111222111 11110001122467777766 89
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcC
Q 015684 193 LYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (402)
Q Consensus 193 l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~ 272 (402)
+++|||... ++ ...+|++||++.|++..+ ...+++|+++|+|++...... ..+..
T Consensus 246 ~i~Ldt~~~--------~~-~~~~Q~~WL~~~L~~~~~---------~~~~w~Iv~~H~P~~~~~~~~-------~~~~~ 300 (426)
T 1xzw_A 246 IIVLSSYSG--------FV-KYSPQYKWFTSELEKVNR---------SETPWLIVLVHAPLYNSYEAH-------YMEGE 300 (426)
T ss_dssp EEECCTTSC--------CS-TTSHHHHHHHHHHHHCCT---------TTCCEEEEECSSCSSCCBSTT-------TTTTH
T ss_pred EEEeeCccc--------CC-CCHHHHHHHHHHHHhhhh---------cCCCEEEEEeccCceeCCCcc-------cCCCH
Confidence 999998421 11 357899999999876432 145579999999986521100 00000
Q ss_pred CCCCCChHHHHHHHHcCCeeEEEeccCCCCccccc------------------CCCeeEEecCCccCC-----CCC--CC
Q 015684 273 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR------------------LTGIQLCYGGGFGYH-----AYG--KA 327 (402)
Q Consensus 273 ~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~------------------~~gi~~~~~~~~g~~-----~y~--~~ 327 (402)
.-.+.+..++++++|+++|+||+|.+.+... .+|+..+..|+.|.. .+. .+
T Consensus 301 ----~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 301 ----AMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp ----HHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred ----HHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccccCCCCC
Confidence 0135567777888899999999998654321 234444444443321 111 11
Q ss_pred CC------CcceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecC
Q 015684 328 GW------ERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377 (402)
Q Consensus 328 ~~------~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~ 377 (402)
.| ..|+-.+++..+ ..-..+|.+.++++..++|+.+|..+-
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~---------t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNR---------THAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSS---------SEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcC---------CeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 12 245666666411 134567888888877789999887753
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.1e-21 Score=186.29 Aligned_cols=263 Identities=16% Similarity=0.171 Sum_probs=151.3
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCCh----hhHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDA----TDAAKSLNA 115 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~----~~~~~~~~~ 115 (402)
...+||+++||+|.+.. ..+.+..+.+. .+||+||++||+++..+. ...++.+.+
T Consensus 117 ~~~~~f~~igD~~~~~~--------------------~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~ 176 (424)
T 2qfp_A 117 DVPYTFGLIGDLGQSFD--------------------SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGR 176 (424)
T ss_dssp TCCEEEEEECSCTTBHH--------------------HHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCC--------------------hHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHH
Confidence 35799999999997531 11223333332 389999999997775432 224455666
Q ss_pred HHhHhHhCCCCEEEEcCCCCCCCCCCHH---HHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEE
Q 015684 116 AFAPAIASNIPWVAVLGNHDQESTLSRE---GVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN 192 (402)
Q Consensus 116 ~l~~~~~~~iP~~~v~GNHD~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~ 192 (402)
.++++. ..+|+++++||||........ .+..+...+. .|.......+..+|++.+++ ++
T Consensus 177 ~l~~~~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~------~P~~~~~~~~~~~ys~~~g~-----------~~ 238 (424)
T 2qfp_A 177 FTERSV-AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYH------VPYEASQSTSPFWYSIKRAS-----------AH 238 (424)
T ss_dssp HHHHHH-TTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCC------CCGGGGTCSSTTSEEEEETT-----------EE
T ss_pred HHHHHH-hcCCeEeecCCcccccCCcccccccchhhhhhcc------CCccccCCCCCcEEEEEECC-----------EE
Confidence 666654 479999999999986421100 0111211111 11100001122467788765 89
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcC
Q 015684 193 LYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (402)
Q Consensus 193 l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~ 272 (402)
+++||+... ++.. .+|++||++.|++..+ ...+++|+++|+|++...... ..+..
T Consensus 239 ~i~Ldt~~~--------~~~~-~~Q~~WL~~~L~~~~~---------~~~~~~Iv~~H~P~~~~~~~~-------~~~~~ 293 (424)
T 2qfp_A 239 IIVLSSYSA--------YGRG-TPQYTWLKKELRKVKR---------SETPWLIVLMHSPLYNSYNHH-------FMEGE 293 (424)
T ss_dssp EEECCTTSC--------CSTT-SHHHHHHHHHHHHCCT---------TTCCEEEEECSSCSSCCBSTT-------TTTTH
T ss_pred EEEecCCcc--------CCCc-HHHHHHHHHHHhhhcc---------cCCCEEEEEeCcCceecCccc-------ccccH
Confidence 999999421 2222 4899999999875422 135679999999996521100 00000
Q ss_pred CCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccC------------------CCeeEEecCCccCC-----CCC--CC
Q 015684 273 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRL------------------TGIQLCYGGGFGYH-----AYG--KA 327 (402)
Q Consensus 273 ~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~------------------~gi~~~~~~~~g~~-----~y~--~~ 327 (402)
.-...+..++++++|+++|+||+|.+...... +|...+..|+.|.. .+. .+
T Consensus 294 ----~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p 369 (424)
T 2qfp_A 294 ----AMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQP 369 (424)
T ss_dssp ----HHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCC
T ss_pred ----HHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccccCccCCCCCC
Confidence 01245677777788999999999995443321 23333333333321 111 11
Q ss_pred CC------CcceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecCCC
Q 015684 328 GW------ERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379 (402)
Q Consensus 328 ~~------~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~~~ 379 (402)
.| ..|+-.+++... .....+|.+.++|+..+.|+.+|...-..
T Consensus 370 ~~s~~~~~~~G~~~l~v~n~---------t~~~~~~~~~~~g~~~~~D~~~i~~~~~~ 418 (424)
T 2qfp_A 370 EYSAFREASFGHGMFDIKNR---------THAHFSWNRNQDGVAVEADSVWFFNRHWY 418 (424)
T ss_dssp TTEEEEECCCEEEEEEECSS---------SEEEEEEEETTSCTTCCSEEEEEECTTTC
T ss_pred CcceEEecCCCEEEEEEEcC---------cEEEEEEEECCCCCEEeeeEEEEEecccc
Confidence 12 235555666411 13455688888888666899988776544
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=148.86 Aligned_cols=198 Identities=12% Similarity=0.046 Sum_probs=105.0
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCC-hhhHHHHHHHHHhHhH
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD-ATDAAKSLNAAFAPAI 121 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~-~~~~~~~~~~~l~~~~ 121 (402)
.|||+++||+|.+. ..++.+.+.+++.+||+||++|| +.+.+ ..+.+. +.++.+.
T Consensus 5 ~mri~~iSD~H~~~--------------------~~~~~~~~~~~~~~~D~vi~~GD-l~~~~~~~~~~~---~~~~~l~ 60 (228)
T 1uf3_A 5 VRYILATSNPMGDL--------------------EALEKFVKLAPDTGADAIALIGN-LMPKAAKSRDYA---AFFRILS 60 (228)
T ss_dssp CCEEEEEECCTTCH--------------------HHHHHHHTHHHHHTCSEEEEESC-SSCTTCCHHHHH---HHHHHHG
T ss_pred eEEEEEEeeccCCH--------------------HHHHHHHHHHhhcCCCEEEECCC-CCCCCCCHHHHH---HHHHHHH
Confidence 58999999999752 22344555556669999999999 55544 333333 3444444
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~ 201 (402)
+.++|+++|+||||.... +.+.+.... ....|.. .... +..+.+.+ .+.++.+++...
T Consensus 61 ~~~~pv~~v~GNHD~~~~---~~~~~~~~~-----~~~~~~~-~~l~---~~~~~~~~----------~~~i~g~~~~~~ 118 (228)
T 1uf3_A 61 EAHLPTAYVPGPQDAPIW---EYLREAANV-----ELVHPEM-RNVH---ETFTFWRG----------PYLVAGVGGEIA 118 (228)
T ss_dssp GGCSCEEEECCTTSCSHH---HHHHHHHHH-----HHHCTTE-EECB---TSEEEETT----------TEEEEEECSEEE
T ss_pred hcCCcEEEECCCCCchhH---HHHHhhhhh-----hccCcce-EEcc---cceEeeCC----------CcEEecCCCCcC
Confidence 468899999999998431 111111000 0000110 0011 11222220 166777764211
Q ss_pred CCCCCCCCCCCCCHHHH----HHHHHHHHH-HHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCC
Q 015684 202 STVPSVPGYGWIKPSQQ----FWFEQTSAR-LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSAS 276 (402)
Q Consensus 202 ~~~~~~~~~g~i~~~q~----~Wl~~~l~~-l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~ 276 (402)
.. + .++++++ .|..+.+.+ +++ ....+.|+++|+|+... . . ..
T Consensus 119 ~~------~-~~~~~~~~~~~~~~~~~~~~~l~~---------~~~~~~il~~H~p~~~~---~------~-------~~ 166 (228)
T 1uf3_A 119 DE------G-EPEEHEALRYPAWVAEYRLKALWE---------LKDYPKIFLFHTMPYHK---G------L-------NE 166 (228)
T ss_dssp SS------S-CCBSSSSCEEEHHHHHHHHGGGGG---------SCSCCEEEEESSCBCBT---T------T-------BT
T ss_pred CC------C-ccChhhcccchhhhHHHHHHHHHh---------CCCCCeEEEEccCcccC---C------c-------cc
Confidence 00 0 1222332 333322111 111 13458999999987431 0 0 01
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCcc
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFG 320 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g 320 (402)
.+...+..+++..+++++++||+|. .. ...+++.++..|+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~GH~H~-~~-~~~~~~~~in~Gs~~ 208 (228)
T 1uf3_A 167 QGSHEVAHLIKTHNPLLVLVAGKGQ-KH-EMLGASWVVVPGDLS 208 (228)
T ss_dssp TSBHHHHHHHHHHCCSEEEECCSSC-EE-EEETTEEEEECCBGG
T ss_pred cCHHHHHHHHHHhCCCEEEEccccc-Cc-cccCCceEEEecccC
Confidence 2344566666666799999999993 33 345677776665544
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.9e-17 Score=149.35 Aligned_cols=217 Identities=14% Similarity=0.154 Sum_probs=114.4
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhH-------------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDA------------- 109 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~------------- 109 (402)
+|||+++||+|.+.. .++.+.+.++..+||+||++|| +++.+....
T Consensus 5 ~mri~~iSDlH~~~~--------------------~~~~~l~~~~~~~~D~vi~~GD-l~~~~~~~~~~~~~~~~~~~p~ 63 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD--------------------LLPKLKGVIAEKQPDILVVVGN-ILKNEALEKEYERAHLARREPN 63 (260)
T ss_dssp CCEEEEEECCTTCGG--------------------GHHHHHHHHHHHCCSEEEEESC-CCCCHHHHHHHHHHHHTTCCCC
T ss_pred eEEEEEEeecCCChH--------------------HHHHHHHHHHhcCCCEEEECCC-CCCccCcchhhhhhhhhhcccc
Confidence 589999999998531 1244555555679999999999 555543211
Q ss_pred -----------HHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEec
Q 015684 110 -----------AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIG 178 (402)
Q Consensus 110 -----------~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~ 178 (402)
.+.+.+.++.+.+.++|+++|+||||.... ..+.+.+.... ..+. ..... +...+.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~---~~~~~~~~~~~-----~~~~-~~~l~--~~~~~~~~ 132 (260)
T 2yvt_A 64 RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAET-----AYPN-IRVLH--EGFAGWRG 132 (260)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTT-----TCTT-EEECS--SEEEEETT
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhh---hhHHHHhhhcc-----CCcc-eEEec--CcceEEEC
Confidence 033455566555568999999999998421 11112222110 0000 00111 11113333
Q ss_pred cCCCCCCCCceeEEEEEEeCCCCCCCCCCCCCCCCCHHHHH----HHHH-HHHHHHHhhcCCccccCCCCCeEEEEecCh
Q 015684 179 GVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQF----WFEQ-TSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253 (402)
Q Consensus 179 ~~~~~~~~~~~~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~----Wl~~-~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~ 253 (402)
+ ++++.++...... .++++++. |+.+ .|+.+++ ....+.|+++|+|+
T Consensus 133 ~-----------~~i~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~l~~---------~~~~~~Il~~H~pp 184 (260)
T 2yvt_A 133 E-----------FEVIGFGGLLTEH--------EFEEDFVLKYPRWYVEYILKFVNE---------LKPRRLVTIFYTPP 184 (260)
T ss_dssp T-----------EEEEEECSEEESS--------CCBSSSSCEEEHHHHHHHGGGGGG---------SCCCEEEEEESSCC
T ss_pred C-----------EEEEecCCCcCCC--------CcCHHHHhhcchhhHHHHHHHHHh---------cCCCCEEEEECCCc
Confidence 3 6677776521100 12222222 5542 1111221 13456799999987
Q ss_pred hhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcce
Q 015684 254 PEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRA 333 (402)
Q Consensus 254 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~ 333 (402)
.... .. .... .....++..+..+++..++++++|||+|. . ....++..++..|+.+- | ++
T Consensus 185 ~~~~-~d------~~~~--~~~~~~~~~l~~~~~~~~~~~vl~GH~H~-~-~~~~~~~~~in~Gs~~~---g------~~ 244 (260)
T 2yvt_A 185 IGEF-VD------RTPE--DPKHHGSAVVNTIIKSLNPEVAIVGHVGK-G-HELVGNTIVVNPGEFEE---G------RY 244 (260)
T ss_dssp SCSS-TT------CBTT--BSCCCSCHHHHHHHHHHCCSEEEECSSCC-E-EEEETTEEEEECCBGGG---T------EE
T ss_pred cccc-cc------cCcc--cccccCcHHHHHHHHHhCCCEEEECCccC-C-cEEeCCEEEEeCCCCCC---C------ce
Confidence 4310 00 0000 00123446667777766799999999993 3 33456666665555442 1 46
Q ss_pred EEEEEe
Q 015684 334 RVVVAS 339 (402)
Q Consensus 334 rv~ei~ 339 (402)
-+++++
T Consensus 245 ~ii~~~ 250 (260)
T 2yvt_A 245 AFLDLT 250 (260)
T ss_dssp EEEETT
T ss_pred EEEEEc
Confidence 666664
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.72 E-value=5.6e-17 Score=153.26 Aligned_cols=251 Identities=16% Similarity=0.079 Sum_probs=122.3
Q ss_pred CCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHHHHH
Q 015684 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAF 117 (402)
Q Consensus 40 ~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l 117 (402)
+...|||+|+||+|+|......... ..+.. .....++.+.+.+++++||+||++||++++.+.+ ...+.+.+.+
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~--~~r~~--~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l 90 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRP--VDRRE--ELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYL 90 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCC--EECHH--HHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccC--cChhH--HHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHH
Confidence 4568999999999998321000000 00000 0123456666677778999999999944444333 2334556667
Q ss_pred hHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEe
Q 015684 118 APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLD 197 (402)
Q Consensus 118 ~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lD 197 (402)
..+.+. +|+++++||||... . ....+.+.....+...+.... ... ...+.+ ..+.++.++
T Consensus 91 ~~L~~~-~pv~~i~GNHD~~~-~--~~~~~~l~~~g~nv~v~~~~~--~~~-----~~~~~~---------~~v~i~glp 150 (336)
T 2q8u_A 91 KRMMRT-APVVVLPGNHDWKG-L--KLFGNFVTSISSDITFVMSFE--PVD-----VEAKRG---------QKVRILPFP 150 (336)
T ss_dssp HHHHHH-SCEEECCC-------C--HHHHHHHHHHCSSEEECCSSS--CEE-----EECTTS---------CEEEEEEEC
T ss_pred HHHHhc-CCEEEECCCCCccc-c--ccHHHHHHhcCCEEEEEeccc--ccC-----ceEEeC---------CCEEEEECC
Confidence 666544 89999999999865 2 222233322110011110000 000 000000 126677776
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCC
Q 015684 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (402)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~ 277 (402)
......... ..+....++++|+.+.+..-.. ..+.+.|+++|+|+....... +.. .+..
T Consensus 151 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~Ill~H~~~~~~~~~~-----~~~--~~~~--- 209 (336)
T 2q8u_A 151 YPDESEALR--KNEGDFRFFLESRLNKLYEEAL---------KKEDFAIFMGHFTVEGLAGYA-----GIE--QGRE--- 209 (336)
T ss_dssp CC---------CCSSHHHHHHHHHHHHHHHHHH---------TCSSEEEEEEESEETTCC---------------CC---
T ss_pred CCCHHHHHH--HhhHHHHHHHHHHHHHHHHhcc---------CCCCCEEEEECccccCCCCCC-----Ccc--chhh---
Confidence 421100000 0122345677887776542110 156689999999985321000 000 0000
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
. .+-..+ ...+++++++||+|..... . .+..++|+|+.....++..+..+|+-+++++
T Consensus 210 ~-~v~~~l-~~~~~d~v~~GH~H~~~~~-~-~~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~ 267 (336)
T 2q8u_A 210 I-IINRAL-IPSVVDYAALGHIHSFREI-Q-KQPLTIYPGSLIRIDFGEEADEKGAVFVELK 267 (336)
T ss_dssp C-EECGGG-SCTTSSEEEEESCSSCEEE-E-ETTEEEECCCSSCCSGGGTTCCCEEEEEEEE
T ss_pred c-ccCHHH-ccccCCEEEEccccCceEe-C-CCccEEECCCCcCCCccccCCCCEEEEEEEe
Confidence 0 000112 2346999999999995433 2 3346777776633333333346899999987
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=8.2e-16 Score=147.89 Aligned_cols=227 Identities=15% Similarity=0.115 Sum_probs=121.1
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHHHHHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFA 118 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l~ 118 (402)
...|||+|+||+|++....... .+.. .....++.+.+.+.+.+||+||++|| +++.+.+ .....+.+.+.
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~-----~r~~--~~~~~l~~~v~~~~~~~~D~VliaGD-l~d~~~p~~~~~~~~~~~l~ 89 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLD-----DREK--DIYDSFKLCIKKILEIKPDVVLHSGD-LFNDLRPPVKALRIAMQAFK 89 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCH-----HHHH--HHHHHHHHHHHHHHTTCCSEEEECSC-SBSSSSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCcc-----hhhH--HHHHHHHHHHHHHHHcCCCEEEECCC-CCCCCCCCHHHHHHHHHHHH
Confidence 3579999999999985321100 0000 00123455555566789999999999 5555433 34445666777
Q ss_pred HhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeC
Q 015684 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (402)
Q Consensus 119 ~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs 198 (402)
.+...++|+++|+||||........ .+. ..+ ......+.+ ..+ .+.. ...+.++.++.
T Consensus 90 ~L~~~~~pv~~v~GNHD~~~~~~~~--------~~~--~~l-~~~v~~l~~-~~v--~~~~--------~~~v~i~gl~~ 147 (386)
T 3av0_A 90 KLHENNIKVYIVAGNHEMPRRLGEE--------SPL--ALL-KDYVKILDG-KDV--INVN--------GEEIFICGTYY 147 (386)
T ss_dssp HHHHTTCEEEECCCGGGSCSSTTSC--------CGG--GGG-TTTCEECSE-EEE--EEET--------TEEEEEEEECC
T ss_pred HHHhcCCcEEEEcCCCCCCcccccc--------CHH--HHH-HHHeEEcCC-CcE--EEeC--------CCCEEEEeCCC
Confidence 6666689999999999985432100 000 000 000011111 011 1110 01266777776
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCC
Q 015684 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (402)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~ 278 (402)
.. .....+..+|++. +.... ..+.+.|+++|+|+..+.+ +... . .
T Consensus 148 ~~----------~~~~~~~~~~l~~----l~~~~-------~~~~~~Ill~H~~~~~~~~-------~~~~--~-----~ 192 (386)
T 3av0_A 148 HK----------KSKREEMLDKLKN----FESEA-------KNYKKKILMLHQGINPYIP-------LDYE--L-----E 192 (386)
T ss_dssp CC----------STTHHHHHHHHHH----HHHHH-------HTCSSEEEEECCCCTTTSS-------SSCS--S-----C
T ss_pred CC----------HHHHHHHHHHHHH----hhhhc-------ccCCCEEEEECcCccccCC-------CCcc--c-----C
Confidence 21 1112233344432 22100 1467899999998844211 1110 0 0
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCC----CCcceEEEEEe
Q 015684 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAG----WERRARVVVAS 339 (402)
Q Consensus 279 ~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~----~~~g~rv~ei~ 339 (402)
+..+ .+++++++||+|.. .....++..++|+|++....++..+ ..+|+-+++++
T Consensus 193 ---~~~l---~~~d~v~~GH~H~~-~~~~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~ 250 (386)
T 3av0_A 193 ---HFDL---PKFSYYALGHIHKR-ILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFS 250 (386)
T ss_dssp ---GGGS---CCCSEEEECSCCSC-EEEECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECC
T ss_pred ---HHHh---hhCCeEEccCCCCC-ccccCCCceEEECCcccccCcchhccccCCCCEEEEEEEe
Confidence 0111 23899999999984 4444567788888887433333211 24788888886
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.66 E-value=2e-15 Score=144.73 Aligned_cols=248 Identities=17% Similarity=0.174 Sum_probs=127.0
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCCh--hhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--TDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~--~~~~~~~~~~l~~~~ 121 (402)
|||+|+||+|++.......... ... ......++.+.+.+.+++||+||++||++.+... ...++.+.+.+..+.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~--~~~--~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~ 76 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPV--DRR--EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 76 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCE--ECH--HHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCc--Chh--HHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHH
Confidence 7999999999987521100000 000 0012345556666677899999999994414432 344556667777776
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~ 201 (402)
.. +|+++|+||||... ..........++... ..+.....+.+. ..++ ..+.++.+.-..
T Consensus 77 ~~-~~v~~i~GNHD~~~---~~~~~~~~~~~~~~~--------~~~~~~~~v~l~--~~~G------~~v~i~glp~~~- 135 (379)
T 3tho_B 77 RT-APVVVLPGNQDWKG---LKLFGNFVTSISSDI--------TFVMSFEPVDVE--AKRG------QKVRILPFPYPD- 135 (379)
T ss_dssp HH-SCEEECCCTTSCTT---HHHHHHHHHTTCSSE--------EECCSSCCEEEE--CTTC------CEEEEEEECCCC-
T ss_pred hC-CCEEEEcCCCcccc---CccccccccccCCcc--------eeecccceEEEE--cCCC------CEEEEEECCCCC-
Confidence 66 99999999999532 111111111111110 011101111111 1111 114555554321
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHH
Q 015684 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281 (402)
Q Consensus 202 ~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 281 (402)
+.. .......++.+|+.+.++++.... ...+.+.|++.|.++....... .....+.. ...
T Consensus 136 ---~~~-~~~~~~~~~~~~l~~~l~~~~~~~------~~~~~~~I~l~H~~v~g~~~~~------~se~~~~~-~v~--- 195 (379)
T 3tho_B 136 ---ESE-ALRKNEGDFRFFLESRLNKLYEEA------LKKEDFAIFMGHFTVEGLAGYA------GIEQGREI-IIN--- 195 (379)
T ss_dssp ---CC-----CHHHHHHHHHHHHHHHHHHHH------HTCSSEEEEEEESCBSCCCC-------------CSC-CBC---
T ss_pred ---HHH-HhhhhccchHHHHHHHHHHHHHHh------cCCCCCeEEEEeccccCCccCC------CCcccccc-ccC---
Confidence 100 011245678889988876432110 0256788999999884321100 00000000 000
Q ss_pred HHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEee
Q 015684 282 FTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASL 340 (402)
Q Consensus 282 l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~~ 340 (402)
..++ ..+++++++||+|..... .++..+.|+|+.....++..+..+|+-+++++.
T Consensus 196 -~~~~-~~~~dyvalGH~H~~q~~--~~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~ 250 (379)
T 3tho_B 196 -RALI-PSVVDYAALGHIHSFREI--QKQPLTIYPGSLIRIDFGEEADEKGAVFVELKR 250 (379)
T ss_dssp -GGGS-CTTSSEEEEESCSSCEEE--EETTEEEECCCSSCCSGGGSSSCCEEEEEECCS
T ss_pred -HHHc-CcCCCEEEcccccCCeEe--CCCCcEEecCCCCCCCcccccCCCEEEEEEEcC
Confidence 1222 246999999999995221 222467888877433444444568889988863
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-14 Score=138.82 Aligned_cols=94 Identities=21% Similarity=0.319 Sum_probs=62.1
Q ss_pred eecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHH
Q 015684 37 RFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLN 114 (402)
Q Consensus 37 ~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~ 114 (402)
....++.|||+|+||+|++.......+.. ....+++.+.+.+.+++||+||++|| +++...+ .....+.
T Consensus 26 ~~~~~~~mrilhiSDlHLg~~~~~~~~~~--------d~~~~l~~ll~~~~~~~~D~VliaGD-lfd~~~~~~~~~~~~~ 96 (431)
T 3t1i_A 26 ALDDENTFKILVATDIHLGFMEKDAVRGN--------DTFVTLDEILRLAQENEVDFILLGGD-LFHENKPSRKTLHTCL 96 (431)
T ss_dssp -CCGGGEEEEEEECCCCBTTTSSCTTTTT--------HHHHHHHHHHHHHHHTTCSEEEECSC-CBSSSSCCHHHHHHHH
T ss_pred CCCCCCCEEEEEEeccCCCCcccccchhh--------hHHHHHHHHHHHHhhcCCCEEEEcCc-cccCCCCCHHHHHHHH
Confidence 33456789999999999997543211100 01234566666677899999999999 5555432 3444555
Q ss_pred HHHhHhH---------------------------------hCCCCEEEEcCCCCCCCC
Q 015684 115 AAFAPAI---------------------------------ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 115 ~~l~~~~---------------------------------~~~iP~~~v~GNHD~~~~ 139 (402)
+.+..+. +.++|+++|+||||....
T Consensus 97 ~~L~r~~~~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g 154 (431)
T 3t1i_A 97 ELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTG 154 (431)
T ss_dssp HHHHHHHBCSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBT
T ss_pred HHHHHHhccCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCccc
Confidence 5555432 248999999999998653
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-13 Score=128.68 Aligned_cols=87 Identities=23% Similarity=0.297 Sum_probs=57.2
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCCh--hhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--TDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~--~~~~~~~~~~l~~~~ 121 (402)
|||+|+||+|++...... +.... .....++.+.+.+.+++||+||++||+ ++... ......+.+.+..+.
T Consensus 1 mkilh~sD~Hlg~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~D~vl~~GDl-~d~~~~~~~~~~~~~~~l~~l~ 72 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHK-----PQREE--EFAEAFKNALEIAVQENVDFILIAGDL-FHSSRPSPGTLKKAIALLQIPK 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-----HHHHH--HHHHHHHHHHHHHHHTTCSEEEEESCS-BSSSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEcccCCCCcccCC-----chhhH--HHHHHHHHHHHHHHhcCCCEEEECCCc-CCCCCCCHHHHHHHHHHHHHHH
Confidence 799999999998542100 00000 001234455566667899999999995 44432 234555667777766
Q ss_pred hCCCCEEEEcCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQES 138 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~ 138 (402)
+.++|+++|+||||...
T Consensus 73 ~~~~~v~~v~GNHD~~~ 89 (333)
T 1ii7_A 73 EHSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp TTTCCEEEECCTTTCCS
T ss_pred HCCCcEEEeCCcCCCcc
Confidence 66899999999999864
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.58 E-value=4.7e-14 Score=134.97 Aligned_cols=93 Identities=23% Similarity=0.319 Sum_probs=57.2
Q ss_pred ecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh--HHHHHHH
Q 015684 38 FRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNA 115 (402)
Q Consensus 38 ~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~ 115 (402)
......|||+|+||+|++.......+. .....+++.+.+.+.+++||+||++|| +++.+.+. ....+.+
T Consensus 8 ~~~~~~mrilhiSDlHLg~~~~~~~~~--------~d~~~~l~~lv~~~~~~~~D~VliaGD-Lfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 8 LHNENTIRILISSDPHVGYGEKDPVRG--------NDSFVSFNEILEIARERDVDMILLGGD-IFHDNKPSRKALYQALR 78 (417)
T ss_dssp --CTTCEEEEEECCCCBTTTTTCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSC-CBSSSSCCHHHHHHHHH
T ss_pred CCCCCCeEEEEEEcCCCCCcccccccc--------hhHHHHHHHHHHHHHhcCCCEEEEcCc-cccCCCCCHHHHHHHHH
Confidence 345678999999999999654321100 001234566667777799999999999 55554332 2222333
Q ss_pred HHhH------------hH---------------------hCCCCEEEEcCCCCCCCC
Q 015684 116 AFAP------------AI---------------------ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 116 ~l~~------------~~---------------------~~~iP~~~v~GNHD~~~~ 139 (402)
.+.. +. +.++|+++++||||....
T Consensus 79 ~lr~~~~g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~ 135 (417)
T 4fbw_A 79 SLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG 135 (417)
T ss_dssp HHHHHHBSSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC---
T ss_pred HHHHhcccCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccc
Confidence 3332 11 248999999999998543
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.58 E-value=6.5e-14 Score=139.30 Aligned_cols=213 Identities=14% Similarity=0.228 Sum_probs=119.4
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--------------
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-------------- 107 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~-------------- 107 (402)
.+++|+++||.+...+. .++ +.. +.+.+|||||++||+|+.++..
T Consensus 115 ~~~rfa~~sc~~~~~g~-----------------~~~---~~~-ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~ 173 (527)
T 2yeq_A 115 PQMTFAFASCQQYEHGY-----------------YTA---YKH-MAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNS 173 (527)
T ss_dssp CCEEEEEECCCCGGGCC-----------------CHH---HHH-HTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSS
T ss_pred CCeEEEEEecCCCCCCc-----------------cHH---HHH-HHhcCCCEEEecCCcccCCCCCcccccccccccCCc
Confidence 57999999999974322 122 223 3347999999999999887531
Q ss_pred ------hHHH-HHHH-----HHhHhHhCCCCEEEEcCCCCCCCCCCHH-----------------HHHHHHHhcCCcccc
Q 015684 108 ------DAAK-SLNA-----AFAPAIASNIPWVAVLGNHDQESTLSRE-----------------GVMKHIVTLKNTLSQ 158 (402)
Q Consensus 108 ------~~~~-~~~~-----~l~~~~~~~iP~~~v~GNHD~~~~~~~~-----------------~~~~~~~~~~~~~~~ 158 (402)
+.|+ .+.+ .++.+ ...+|+++++||||+.++.... .+..++..+|.....
T Consensus 174 ~e~~tl~~yr~~y~~~~~dp~lq~~-~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~ 252 (527)
T 2yeq_A 174 AEIITLQDYRNRHAQYRSDANLKAA-HAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISS 252 (527)
T ss_dssp SSCCSHHHHHHHHHHHHTCHHHHHH-HHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGG
T ss_pred ccccCHHHHHHHHHHHhCCHHHHHH-HhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCccc
Confidence 1111 1111 12222 2468999999999997653211 111222222211000
Q ss_pred cCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCCCCCC-------------CCCCCCCCHHHHHHHHHHH
Q 015684 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPS-------------VPGYGWIKPSQQFWFEQTS 225 (402)
Q Consensus 159 ~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~~~-------------~~~~g~i~~~q~~Wl~~~l 225 (402)
.|.+ ....-+|++.+++ .+.+++||+..|..... .+....+..+|++||++.|
T Consensus 253 -~p~~---~~~~~y~sf~~G~----------lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L 318 (527)
T 2yeq_A 253 -LPNG---PDMQLYRHFTYGN----------LASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNL 318 (527)
T ss_dssp -CCBT---TBCCCCEEEEETT----------TEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHH
T ss_pred -CCCC---CCceEEEEEEcCC----------cceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHH
Confidence 0110 1112356777755 27899999976644321 1122357899999999987
Q ss_pred HHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCe--eEEEeccCCCCc
Q 015684 226 ARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDV--KAVFTGHDHVND 303 (402)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v--~~v~~GH~H~~~ 303 (402)
++ ....++||++|+|+........... ....+.........+.+..++.+++| .++|+||+|...
T Consensus 319 ~~------------s~a~W~Iv~s~~p~~~~~~~~g~~~-~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~ 385 (527)
T 2yeq_A 319 GS------------STAHWNVLAQQIFFAKWNFGTSASP-IYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASW 385 (527)
T ss_dssp HH------------CCSSEEEEECSSCCSCCCSSCSSSC-CEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEE
T ss_pred hc------------CCCCeEEEEeCCcccccccCCCccc-ccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHh
Confidence 63 2567999999999965311100000 00111111001123455566666667 499999999954
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.56 E-value=8.1e-14 Score=120.68 Aligned_cols=58 Identities=12% Similarity=0.007 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCC--CCCCCcceEEEEEe
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG--KAGWERRARVVVAS 339 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~--~~~~~~g~rv~ei~ 339 (402)
..+..+++..+++++++||+|.. .....+|+.++..|+.+.. ++ .....+++.+++++
T Consensus 107 ~~l~~~~~~~~~d~vi~GHtH~~-~~~~~~~~~~inpGS~~~~-~~~~~~~~~~~y~il~~~ 166 (192)
T 1z2w_A 107 ASLALLQRQFDVDILISGHTHKF-EAFEHENKFYINPGSATGA-YNALETNIIPSFVLMDIQ 166 (192)
T ss_dssp HHHHHHHHHHSSSEEECCSSCCC-EEEEETTEEEEECCCTTCC-CCSSCSCCCCEEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCcCcC-ccEeECCEEEEECCccccc-CCCCCcCCCCcEEEEEEE
Confidence 34555655557999999999994 4556688888877776532 11 11235789999987
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-13 Score=131.84 Aligned_cols=90 Identities=23% Similarity=0.317 Sum_probs=57.8
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh--HHHHHHHHHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNAAFA 118 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~~l~ 118 (402)
.+.|||+|+||+|++.......+. .....+++.+.+.+.+.+||+||++|| +++.+.+. ....+.+.+.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~--------~d~~~~l~~lv~~~~~~~~D~VliaGD-Lfd~~~ps~~a~~~~~~~Lr 144 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRG--------NDSFVSFNEILEIARERDVDMILLGGD-IFHDNKPSRKALYQALRSLR 144 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSC-SBSSSSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEecccCCCcccCcccc--------hhHHHHHHHHHHHHHhcCCCEEEEcCc-cccCCCCCHHHHHHHHHHHH
Confidence 467999999999998654321100 001234566667777799999999999 55554432 2222233333
Q ss_pred H------------hH---------------------hCCCCEEEEcCCCCCCCC
Q 015684 119 P------------AI---------------------ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 119 ~------------~~---------------------~~~iP~~~v~GNHD~~~~ 139 (402)
. +. +.++|+++++||||....
T Consensus 145 ~~~~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~ 198 (472)
T 4fbk_A 145 LNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG 198 (472)
T ss_dssp HHHBSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC
T ss_pred HhcccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccc
Confidence 2 11 248999999999998654
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.6e-13 Score=118.02 Aligned_cols=59 Identities=14% Similarity=-0.034 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCC-CCCCCCcceEEEEEe
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAY-GKAGWERRARVVVAS 339 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y-~~~~~~~g~rv~ei~ 339 (402)
..+..+++..+++++++||+|.. .....+|+.++..|+.+..-. ...+..++|.+++++
T Consensus 131 ~~l~~~~~~~~~d~vl~GHtH~~-~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~i~ 190 (215)
T 2a22_A 131 GSLEQWQRRLDCDILVTGHTHKL-RVFEKNGKLFLNPGTATGAFSALTPDAPPSFMLMALQ 190 (215)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCC-EEEEETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEE
T ss_pred HHHHHHHhhcCCCEEEECCcCCC-ccEeeCCEEEEECCcccccCCCCCCCCCCcEEEEEEe
Confidence 44556665557999999999994 445568888887777653211 112245789999987
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-13 Score=123.90 Aligned_cols=68 Identities=18% Similarity=0.258 Sum_probs=48.2
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
.+.|||+++||+|..... + +..++|+||++|| +++.+..+.++.+.+.++.+
T Consensus 57 ~~~mri~~iSD~H~~~~~-----------------------l----~i~~~D~vi~aGD-l~~~g~~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG-----------------------I----QMPYGDILLHTGD-FTELGLPSEVKKFNDWLGNL 108 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT-----------------------C----CCCSCSEEEECSC-CSSSCCHHHHHHHHHHHHTS
T ss_pred CCCeEEEEEeeCCCCcch-----------------------h----ccCCCCEEEECCc-ccCCCCHHHHHHHHHHHHhC
Confidence 467999999999975321 1 1257999999999 66666655555555655542
Q ss_pred HhCCCCEEEEcCCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQES 138 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~ 138 (402)
...|+++|+||||...
T Consensus 109 --~~~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 109 --PYEYKIVIAGNHELTF 124 (296)
T ss_dssp --CCSEEEECCCTTCGGG
T ss_pred --CCCeEEEEcCCccccc
Confidence 1246999999999853
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.51 E-value=9.6e-15 Score=132.12 Aligned_cols=103 Identities=9% Similarity=0.037 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcC-C
Q 015684 212 WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-D 290 (402)
Q Consensus 212 ~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~-~ 290 (402)
.+++++++||++....+. ...+...|+++|+++... .+ +.. .+..+.+.+..+++.. +
T Consensus 109 ~l~~~~~~~L~~lp~~~~---------~~~~~~~i~~~H~~p~~~--~~---------~~~-~~~~~~~~l~~~~~~~~~ 167 (252)
T 1nnw_A 109 KLGHEGREYLRDLPIYLV---------DKIGGNEVFGVYGSPINP--FD---------GEV-LAEQPTSYYEAIMRPVKD 167 (252)
T ss_dssp HHHHHHHHHHHTSCSCEE---------EEETTEEEEEESSCSSCT--TT---------CCC-CSSCCHHHHHHHHGGGTT
T ss_pred HCCHHHHHHHHhCCceEE---------EeeCCcEEEEEcCCCCCC--cc---------ccc-CCCCCHHHHHHHHhcCCC
Confidence 356777888765211000 001235789999976221 10 000 0112345566677665 7
Q ss_pred eeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEE
Q 015684 291 VKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVA 338 (402)
Q Consensus 291 v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei 338 (402)
+++++|||+|. ......+|+.++..|+.|..--+ ....++-++++
T Consensus 168 ~~~vi~GHtH~-~~~~~~~~~~~in~Gs~~~~~~~--~~~~~y~il~~ 212 (252)
T 1nnw_A 168 YEMLIVASPMY-PVDAMTRYGRVVCPGSVGFPPGK--EHKATFALVDV 212 (252)
T ss_dssp SSEEEESTTCS-EEEEEETTEEEEEECCSSSCSSS--SCCEEEEEEET
T ss_pred CCEEEECCccc-cceEecCCeEEEECCCccCCCCC--CCcceEEEEEC
Confidence 99999999999 45556788887777776643211 12345555554
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.3e-14 Score=128.33 Aligned_cols=204 Identities=12% Similarity=0.034 Sum_probs=107.9
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
....||+++||+|.. ...++.+.+.++..++|.|+++||++ +.+... ....+.+.
T Consensus 9 ~~~~~i~~iSDiHg~--------------------~~~l~~vl~~~~~~~~D~ii~~GDlv-~~g~~~--~~~~~~l~-- 63 (270)
T 3qfm_A 9 MDMTKIALLSDIHGN--------------------TTALEAVLADARQLGVDEYWLLGDIL-MPGTGR--RRILDLLD-- 63 (270)
T ss_dssp --CEEEEEECCCTTC--------------------HHHHHHHHHHHHHTTCCEEEECSCCS-SSSSCS--HHHHHHHH--
T ss_pred ccccEEEEEecCCCC--------------------HHHHHHHHHHHHhcCCCEEEEcCCCC-CCCCCH--HHHHHHHH--
Confidence 467899999999932 23345555666667899999999954 443221 12223333
Q ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCC
Q 015684 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGD 200 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~ 200 (402)
+. .|+++|+||||.. +.+.... . .... .....+. . ....
T Consensus 64 -~~-~~~~~v~GNhD~~-------~~~~~~~---~---~~~~-----~~~~~~~---~------------------~~~~ 102 (270)
T 3qfm_A 64 -QL-PITARVLGNWEDS-------LWHGVRK---E---LDST-----RPSQRYL---L------------------RQCQ 102 (270)
T ss_dssp -TS-CEEEECCCHHHHH-------HHHHHTT---C---SCTT-----SHHHHHH---H------------------HHHH
T ss_pred -cc-CCEEEEcCChHHH-------HHHhhcc---c---cCCC-----cHHHHHH---H------------------HHHH
Confidence 22 3799999999962 1111100 0 0000 0000000 0 0000
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChH
Q 015684 201 YSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSG 280 (402)
Q Consensus 201 ~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 280 (402)
+ ....+++++++||+..-..+. ..-+...|+++|..+.. .+ .+.+ .+....+
T Consensus 103 ~-------~~~~L~~~~~~~L~~LP~~~~---------~~~~g~~i~lvHg~p~~---~~--------~~~~-~~~~~~~ 154 (270)
T 3qfm_A 103 Y-------VLEEISLEEIEVLHNQPLQIH---------RQFGDLTVGISHHLPDK---NW--------GREL-IHTGKQE 154 (270)
T ss_dssp H-------HHTTSCHHHHHHHHSCCSEEE---------EEETTEEEEEESSBTTB---SS--------SSTT-STTCCHH
T ss_pred H-------HHHHcCHHHHHHHHhCCCceE---------EEECCcEEEEEECCCCC---CC--------Ccee-cCCCcHH
Confidence 0 023478889999876311000 00133467888974422 11 0000 1112345
Q ss_pred HHHHHHHcCCeeEEEeccCCCCccccc-CCCeeEEecCCccCCCCCCC----CCCcceEEEEEe
Q 015684 281 FFTTMVAAGDVKAVFTGHDHVNDFCGR-LTGIQLCYGGGFGYHAYGKA----GWERRARVVVAS 339 (402)
Q Consensus 281 ~l~~l~~~~~v~~v~~GH~H~~~~~~~-~~gi~~~~~~~~g~~~y~~~----~~~~g~rv~ei~ 339 (402)
.+..+++..+++++++||+|.+ .... .+|+.++..||.|....+.+ +....|-+++++
T Consensus 155 ~l~~~~~~~~~d~~i~GHtH~~-~~~~~~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~ 217 (270)
T 3qfm_A 155 EFDRLVTHPPCDIAVYGHIHQQ-LLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFD 217 (270)
T ss_dssp HHHHTTTTTTCSEEECCSSCSE-EEEECTTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEE
T ss_pred HHHHHhcccCCCEEEECCcCch-HheeccCCEEEEECCCccCCCCCCccccCCCCCEEEEEEec
Confidence 5677776668999999999984 4444 47888888888775433311 123556677665
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.42 E-value=7.4e-12 Score=107.90 Aligned_cols=66 Identities=23% Similarity=0.270 Sum_probs=44.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
++.|||+++||+|.. ...++.+.+.++..++|+|+++||+ .+. +.++.+
T Consensus 23 ~g~m~i~~iSD~Hg~--------------------~~~l~~~l~~~~~~~~D~ii~~GDl-~~~----------~~~~~l 71 (190)
T 1s3l_A 23 QGHMKIGIMSDTHDH--------------------LPNIRKAIEIFNDENVETVIHCGDF-VSL----------FVIKEF 71 (190)
T ss_dssp ---CEEEEECCCTTC--------------------HHHHHHHHHHHHHSCCSEEEECSCC-CST----------HHHHHG
T ss_pred cCCeEEEEEeeCCCC--------------------HHHHHHHHHHHhhcCCCEEEECCCC-CCH----------HHHHHH
Confidence 456999999999921 1233445555666799999999995 431 122333
Q ss_pred HhCCCCEEEEcCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQE 137 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~ 137 (402)
.+.+.|+++|+||||..
T Consensus 72 ~~l~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 72 ENLNANIIATYGNNDGE 88 (190)
T ss_dssp GGCSSEEEEECCTTCCC
T ss_pred HhcCCCEEEEeCCCcch
Confidence 33478999999999974
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.41 E-value=9.1e-12 Score=106.09 Aligned_cols=74 Identities=15% Similarity=-0.010 Sum_probs=49.5
Q ss_pred CeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCC
Q 015684 244 PGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHA 323 (402)
Q Consensus 244 ~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~ 323 (402)
..|+++|+|+... + .+...+..+++..+++++++||+|.. .....+|+.++..|+.+..-
T Consensus 78 ~~i~~~Hg~~~~~---~----------------~~~~~l~~~~~~~~~d~vi~GHtH~~-~~~~~~~~~~inpGs~~~~~ 137 (176)
T 3ck2_A 78 TKIIQTHGHLFDI---N----------------FNFQKLDYWAQEEEAAICLYGHLHVP-SAWLEGKILFLNPGSISQPR 137 (176)
T ss_dssp EEEEEECSGGGTT---T----------------TCSHHHHHHHHHTTCSEEECCSSCCE-EEEEETTEEEEEECCSSSCC
T ss_pred eEEEEECCCccCC---C----------------CCHHHHHHHHHhcCCCEEEECCcCCC-CcEEECCEEEEECCCCCcCC
Confidence 4788999977431 0 12344566666678999999999994 55566888888777766432
Q ss_pred CCCCCCCcceEEEEEe
Q 015684 324 YGKAGWERRARVVVAS 339 (402)
Q Consensus 324 y~~~~~~~g~rv~ei~ 339 (402)
.+ ...+++.+++++
T Consensus 138 ~~--~~~~~y~il~~~ 151 (176)
T 3ck2_A 138 GT--IRECLYARVEID 151 (176)
T ss_dssp TT--CCSCCEEEEEEC
T ss_pred CC--CCCCeEEEEEEc
Confidence 11 123689999986
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-12 Score=113.34 Aligned_cols=81 Identities=15% Similarity=0.118 Sum_probs=49.4
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
.|||+++||+|++....... ..+. ......+.+.+.+++ .++|+|+++||++. .+ . .+..+.+.++.
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~-~~~~------~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~-~~-~-~~~~~~~~l~~- 69 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINL-NPEV------RFKGFEIVILTNLLKVLKPEDTLYHLGDFTW-HF-N-DKNEYLRIWKA- 69 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHH-STTT------CCTTHHHHHHHHHHTTCCTTCEEEECSCCBS-CS-C-CTTSHHHHHHH-
T ss_pred CcEEEEEeccccCCCccccc-cCCC------CHHHHHHHHHHHHHHhCCCCCEEEECCCCCC-Cc-h-hHHHHHHHHHH-
Confidence 47899999999975431110 0000 012334555566655 48999999999544 33 1 12223344443
Q ss_pred HhCCCCEEEEcCCCCC
Q 015684 121 IASNIPWVAVLGNHDQ 136 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~ 136 (402)
.+.|+++|+||||.
T Consensus 70 --l~~~~~~v~GNhD~ 83 (195)
T 1xm7_A 70 --LPGRKILVMGNHDK 83 (195)
T ss_dssp --SSSEEEEECCTTCC
T ss_pred --CCCCEEEEeCCCCC
Confidence 45689999999997
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-12 Score=116.85 Aligned_cols=81 Identities=19% Similarity=0.122 Sum_probs=49.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCe
Q 015684 212 WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDV 291 (402)
Q Consensus 212 ~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v 291 (402)
.+++++++||+.. ... .....++++|.++.... + +. ..+...+..+++..++
T Consensus 92 ~l~~~~~~~L~~l----p~~---------~~~~~i~~~Hg~p~~~~--~---------~~----~~~~~~~~~~l~~~~~ 143 (246)
T 3rqz_A 92 QLQAEHLQYLESL----PNR---------MIDGDWTVVHGSPRHPI--W---------EY----IYNARIAALNFPAFDT 143 (246)
T ss_dssp HCCHHHHHHHHHC----CSE---------EEETTEEEESSCSSSTT--T---------CC----CCSHHHHHHHGGGCCS
T ss_pred HcCHHHHHHHHhC----CcE---------EEECCEEEEECCcCCcc--c---------cc----cCChHHHHHHHhccCC
Confidence 3678889999863 110 11236889998653310 0 00 1133455666777789
Q ss_pred eEEEeccCCCCccccc---------------------CCCeeEEecCCccC
Q 015684 292 KAVFTGHDHVNDFCGR---------------------LTGIQLCYGGGFGY 321 (402)
Q Consensus 292 ~~v~~GH~H~~~~~~~---------------------~~gi~~~~~~~~g~ 321 (402)
+++||||+|.+ +... ..|..++..||.|.
T Consensus 144 ~l~i~GHtH~p-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~ 193 (246)
T 3rqz_A 144 PLCFVGHTHVP-LYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQ 193 (246)
T ss_dssp SEEECCSSSSE-EEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSC
T ss_pred CEEEECCcCcc-cEEEecccccccccccccccceeecCCCeEEEECCccCC
Confidence 99999999984 3322 23677777777774
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.8e-11 Score=107.09 Aligned_cols=81 Identities=19% Similarity=0.280 Sum_probs=46.7
Q ss_pred CCcceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh----
Q 015684 32 QERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT---- 107 (402)
Q Consensus 32 ~~~~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~---- 107 (402)
.++.+.|.....|||+++||+|... ..++.+.+.++..++|+|+++||+ .+.+..
T Consensus 14 ~~~~~~~~~~~mmki~~iSD~H~~~--------------------~~l~~~l~~~~~~~~d~vi~~GDl-~~~g~~~~~~ 72 (208)
T 1su1_A 14 GTENLYFQSNAMMKLMFASDIHGSL--------------------PATERVLELFAQSGAQWLVILGDV-LNHGPRNALP 72 (208)
T ss_dssp -----------CCEEEEECCCTTBH--------------------HHHHHHHHHHHHHTCSEEEECSCC-SCCCTTSCCC
T ss_pred CcccceecccccEEEEEEEcCCCCH--------------------HHHHHHHHHHHhcCCCEEEECCCc-cccCcccccc
Confidence 4456777777779999999999631 233445555556789999999994 443321
Q ss_pred hH--HHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 108 DA--AKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 108 ~~--~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
.. ...+.+.+. +.+.|+++|+||||.
T Consensus 73 ~~~~~~~~~~~l~---~~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 73 EGYAPAKVVERLN---EVAHKVIAVRGNCDS 100 (208)
T ss_dssp TTBCHHHHHHHHH---TTGGGEEECCCTTCC
T ss_pred cccCHHHHHHHHH---hcCCceEEEECCCch
Confidence 11 123333443 345699999999997
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.7e-10 Score=114.28 Aligned_cols=211 Identities=15% Similarity=0.084 Sum_probs=102.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHHHHHhH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAP 119 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~~~l~~ 119 (402)
..+++|+|+||+|...... .+... ... ........+..+.+.++++.|| +++.+||++.+.. ...+..-...++.
T Consensus 27 ~~~l~Il~~~D~H~~~~~~-~~~~~-~~~-~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~ 102 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPV-ELTLS-GEK-TPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTL-YFNQYRGLADRYF 102 (552)
T ss_dssp -CEEEEEEECCCTTCCSCE-EEECS-SSE-EEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH-HHHHHTTHHHHHH
T ss_pred CeeEEEEEEcccccCcccc-cccCc-ccc-cccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcH-HHHHhCCcHHHHH
Confidence 4579999999999643221 00000 000 0001223334455555667888 8899999655432 1111111122233
Q ss_pred hHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccC--CCCCccccc-cccc-eEEeccCCCCCCCCceeEEEEE
Q 015684 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN--PSDAHIIDG-FGNY-NLEIGGVKGSGFENKSVLNLYF 195 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~g-~~~y-~~~~~~~~~~~~~~~~~~~l~~ 195 (402)
+...+.. ++++||||+... .+.+.+.+....+.+-..+ ..+.....+ ...| .+++.+ ..+.++.
T Consensus 103 ln~lg~d-~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G---------~kIgiiG 170 (552)
T 2z1a_A 103 MHRLRYR-AMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGG---------ERVGIIG 170 (552)
T ss_dssp HHHTTCC-EEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETT---------EEEEEEE
T ss_pred HHhcCCC-ccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECC---------EEEEEEE
Confidence 3334544 678999999653 4556666544332111100 000000000 1123 233333 2266777
Q ss_pred EeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCC
Q 015684 196 LDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSA 275 (402)
Q Consensus 196 lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~ 275 (402)
+.+...... ..+..++.-.+..+-+++.++++++. ....+|+++|.|....
T Consensus 171 ~~~~~~~~~-~~~~~~~~~~d~~~~~~~~v~~l~~~---------~~d~iIvL~H~g~~~d------------------- 221 (552)
T 2z1a_A 171 LTTPDTREI-SNPGPTVAFLDPYESAQKAVYELLAK---------GVNKIVVLSHLGYGED------------------- 221 (552)
T ss_dssp EECTTHHHH-SCCCTTCEECCHHHHHHHHHHHHHHT---------TCCCEEEEEESCHHHH-------------------
T ss_pred ecccchhhc-cCCCCCcEECCHHHHHHHHHHHHHhc---------CCCEEEEEeCCCcchH-------------------
Confidence 776321000 00001221112233355555556542 4668999999997431
Q ss_pred CCChHHHHHHHHc-CCeeEEEeccCCCCc
Q 015684 276 SVNSGFFTTMVAA-GDVKAVFTGHDHVND 303 (402)
Q Consensus 276 ~~~~~~l~~l~~~-~~v~~v~~GH~H~~~ 303 (402)
..+.+. .+|+++++||.|...
T Consensus 222 -------~~la~~~~gvDlIlgGHtH~~~ 243 (552)
T 2z1a_A 222 -------LKLARRLVGVQVIVGGHSHTLL 243 (552)
T ss_dssp -------HHHHTTCSSCCEEEECSSCCCB
T ss_pred -------HHHHHhCCCccEEEeCCcCccc
Confidence 123333 579999999999843
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.2e-10 Score=99.06 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=30.6
Q ss_pred CCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 289 GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 289 ~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
.+++++++||+|.. .....+|+.++..|+.+. +++-+++++
T Consensus 127 ~~~d~vi~GHtH~~-~~~~~~~~~~iNpGS~~~---------~sy~il~~~ 167 (178)
T 2kkn_A 127 EKPQVILFGHTHEP-EDTVKAGVRFLNPGSLAE---------GSYAVLELD 167 (178)
T ss_dssp SCCSEEECCSCSSC-CEEEETTEEEECCCCTTT---------TEEEEEEEE
T ss_pred cCCCEEEECccCCC-CeEEeCCEEEEECCCCCC---------CeEEEEEEC
Confidence 46899999999994 455567887777666553 467788886
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.99 E-value=3.4e-08 Score=98.89 Aligned_cols=188 Identities=12% Similarity=0.047 Sum_probs=88.4
Q ss_pred HHHHHHHHHhc--C--CC-EEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 79 TAFINRMISAE--K--PD-LIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 79 ~~~l~~~i~~~--~--pD-~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
+..+.+.++++ + || ++|.+||++.+.. ...+..-...++.+...+.+++ + ||||+.. ..+.+.+.+....
T Consensus 107 la~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~--G~~~l~~~l~~~~ 181 (562)
T 2wdc_A 107 LTALIRDQKARVEAEGGKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLVGVDHM-V-SHWEWTL--GRERVEELLGLFR 181 (562)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHHTCCEE-C-CSGGGGG--CHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhhCCcEE-e-cchhccc--CHHHHHHHHHhCC
Confidence 33344444444 4 99 9999999655432 1111111122222334577765 6 9999854 3456666665543
Q ss_pred CcccccCC--CCCccccccccce-EEeccCCCCCCCCceeEEEEEEeCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 015684 154 NTLSQVNP--SDAHIIDGFGNYN-LEIGGVKGSGFENKSVLNLYFLDSGDYS-TVPSVPGYGWIKPSQQFWFEQTSARLQ 229 (402)
Q Consensus 154 ~~~~~~~p--~~~~~~~g~~~y~-~~~~~~~~~~~~~~~~~~l~~lDs~~~~-~~~~~~~~g~i~~~q~~Wl~~~l~~l~ 229 (402)
+.+-..+- ..... .....|. +++.+ ..+.++.+.+.... ..+.....++.-....+-+++.+++++
T Consensus 182 ~p~L~aNv~~~~~~~-~~~~py~i~e~~G---------~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 251 (562)
T 2wdc_A 182 GEFLSYNIVDDLFGD-PLFPAYRIHRVGP---------YALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKAR 251 (562)
T ss_dssp SEECCSSCEETTTCC-BSSCSEEEEEETT---------EEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCC-cccCCeEEEEECC---------eEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHH
Confidence 22111010 00000 0011232 23332 22567777652100 000000012111111233555555565
Q ss_pred HhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHc-CCeeEEEeccCCCCcccc-c
Q 015684 230 RAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCG-R 307 (402)
Q Consensus 230 ~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~-~~v~~v~~GH~H~~~~~~-~ 307 (402)
+. ....+|+++|.|.... ..+.+. .+|+++++||.|...... .
T Consensus 252 ~~---------~~d~iIvLsH~g~~~d--------------------------~~la~~~~giDlIlgGHtH~~~~~~~~ 296 (562)
T 2wdc_A 252 AE---------GANAVVLLSHNGMQLD--------------------------AALAERIRGIDLILSGHTHDLTPRPWR 296 (562)
T ss_dssp HT---------TCSEEEEEECSCHHHH--------------------------HHHHTTSSSCCEEEECSSCCCCSSCEE
T ss_pred HC---------CCCEEEEEeCCCCcch--------------------------HHHHhcCCCCcEEEeCCCCCCCccCEE
Confidence 42 4567899999997431 123333 579999999999843221 1
Q ss_pred CCCeeEEec
Q 015684 308 LTGIQLCYG 316 (402)
Q Consensus 308 ~~gi~~~~~ 316 (402)
.+++.++-+
T Consensus 297 ~~~t~vvqa 305 (562)
T 2wdc_A 297 VGKTWIVAG 305 (562)
T ss_dssp ETTEEEEEC
T ss_pred ECCEEEEec
Confidence 255555544
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.6e-08 Score=99.16 Aligned_cols=94 Identities=16% Similarity=0.071 Sum_probs=49.0
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh----cCC-CEEEEcCCccCCCChhh--HHHHHH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA----EKP-DLIVFTGDNIFGFDATD--AAKSLN 114 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~p-D~vv~~GDli~~~~~~~--~~~~~~ 114 (402)
.+++|+|+||+|........ . +.....+..+.+.+++ .+| ++++.+||++.+..... ..+...
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~---------~-~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~ 76 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEY---------G-EYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDF 76 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTT---------S-CCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHH
T ss_pred eEEEEEEecccccCccCCCC---------C-CcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHH
Confidence 46999999999975322110 0 0112222223333332 246 79999999553321111 012233
Q ss_pred HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHh
Q 015684 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVT 151 (402)
Q Consensus 115 ~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~ 151 (402)
+.+.. .+. -++++||||+... .+.+.+.+..
T Consensus 77 ~~ln~---lg~-d~~~~GNHEfd~g--~~~l~~~~~~ 107 (516)
T 1hp1_A 77 RGMNL---VGY-DAMAIGNHEFDNP--LTVLRQQEKW 107 (516)
T ss_dssp HHHHH---HTC-CEEECCGGGGSSC--HHHHHHHHHH
T ss_pred HHHhc---cCC-CEEeeccccccCC--HHHHHHHHhh
Confidence 34443 354 4788999999654 3445555544
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.94 E-value=5.1e-08 Score=97.25 Aligned_cols=239 Identities=14% Similarity=0.066 Sum_probs=111.5
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHH-----HH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKS-----LN 114 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~-----~~ 114 (402)
..+++|+++||+|-.-.... +....+ ........+..+.+.++++.|+ +++.+||++.+. ....+.. ..
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~-~~~~~~---~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs-~~~~~~~~~~~~~~ 91 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTD-FTSRNQ---YQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGS-PFCNYLIAHSGSSQ 91 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCC-SSSTTC---CCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSS-HHHHHHHHTTCSSH
T ss_pred CCcEEEEEEeccCCCccCcc-cccCCC---cCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCc-HHHHHHhhcccCcc
Confidence 46899999999995432211 110000 0112233334444555566776 677799955432 2211110 12
Q ss_pred HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccC--CCCCccccccccceEEeccCCCCCCCCceeEE
Q 015684 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN--PSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN 192 (402)
Q Consensus 115 ~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~ 192 (402)
..++.+...+.. ++++||||+... .+.+.+.+....+.+-..+ ..+ .......+..+++.+ ..+.
T Consensus 92 ~~~~~ln~lg~D-~~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g-~p~~~~py~i~e~~G---------~kIg 158 (527)
T 3qfk_A 92 PLVDFYNRMAFD-FGTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYEND-STLTDNGVKYFQVGD---------QTVG 158 (527)
T ss_dssp HHHHHHHHTCCC-EECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETT-EESSSCSEEEEEETT---------EEEE
T ss_pred hHHHHHHhcCCc-EEeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCC-CCccCCCEEEEEECC---------EEEE
Confidence 333333345665 467999998543 4556666655432211000 000 000011112223332 2256
Q ss_pred EEEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCC
Q 015684 193 LYFLDSGDYSTVPSVP--GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQE 270 (402)
Q Consensus 193 l~~lDs~~~~~~~~~~--~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~ 270 (402)
++.+.+....... .+ ..++.-.+..+.+++.++++++ ....+|+++|.+...... .|...+
T Consensus 159 viG~~~~~~~~~~-~~~~~~g~~~~d~~~~~~~~v~~l~~----------~~D~iIvl~H~G~~~d~~------~~~~~~ 221 (527)
T 3qfk_A 159 VIGLTTQFIPHWE-QPEHIQSLTFHSAFEILQQYLPEMKR----------HADIIVVCYHGGFEKDLE------SGTPTE 221 (527)
T ss_dssp EEEEECTTGGGTS-CHHHHTTEEECCHHHHHHHHHHHHHH----------HCSEEEEEEECCCSBCTT------TCCBSS
T ss_pred EEEeccCCccccc-CccccCCcEEcCHHHHHHHHHHHHHh----------CCCEEEEEeCcCcccccc------cCcccc
Confidence 7777663110000 00 0122222345667777777763 345688889987632100 111111
Q ss_pred cCCCCCCCh-HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCC
Q 015684 271 GISSASVNS-GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGG 318 (402)
Q Consensus 271 ~~~~~~~~~-~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~ 318 (402)
.+. ..+. ..+..-+. .+|+++++||.|. ......+++.++.+++
T Consensus 222 ~~~--~e~~~~~la~~~~-~giDlIlgGHtH~-~~~~~v~~~~ivqag~ 266 (527)
T 3qfk_A 222 VLT--GENEGYAMLEAFS-KDIDIFITGHQHR-QIAERFKQTAVIQPGT 266 (527)
T ss_dssp CCS--SSCCHHHHHHHHG-GGCSEEECCSSCC-EEEEEETTEEEEEECS
T ss_pred ccc--cchHHHHHHHhcC-CCCcEEEECCCCc-ccceEECCEEEeccCh
Confidence 100 0111 11222122 4699999999998 4445567777765543
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2.1e-08 Score=100.43 Aligned_cols=209 Identities=16% Similarity=0.124 Sum_probs=99.4
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
-+++|+|+||+|-.-...............+......+..+.+.++++.| +++|.+||++.+.. ......-...+..+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTI-WFTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSH-HHHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCch-hhhhhCChHHHHHH
Confidence 46999999999954332110000000000011233334444455556666 59999999655432 11111111223333
Q ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHH-HHHHhcCCcccccCCCCCcccc--------ccccce-EEeccCCCCCCCCcee
Q 015684 121 IASNIPWVAVLGNHDQESTLSREGVM-KHIVTLKNTLSQVNPSDAHIID--------GFGNYN-LEIGGVKGSGFENKSV 190 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~--------g~~~y~-~~~~~~~~~~~~~~~~ 190 (402)
...+.. ++++||||+... .+.+. +++....+.+ + ........ ....|. ++..+ ..
T Consensus 103 n~lg~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~--l-~aNv~~~~~~~p~~~~~~~~~~i~~~~G---------~k 167 (546)
T 4h2g_A 103 NALRYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPI--L-SANIKAKGPLASQISGLYLPYKVLPVGD---------EV 167 (546)
T ss_dssp HHHTCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCE--E-CSSEEECHHHHHHHBTTBBSEEEEEETT---------EE
T ss_pred HhcCCc-EEeccCcccccC--HHHHHHHHHhhcCCCE--E-EEEeecCCCCCccccccCCCeEEEEECC---------EE
Confidence 335655 578999998533 23333 3332222111 0 00000000 011222 23322 23
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCC
Q 015684 191 LNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQE 270 (402)
Q Consensus 191 ~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~ 270 (402)
+.++.+.+...... ..+..++.-.+..+.+++.++++++. ....+|+++|.+....
T Consensus 168 IgiiG~~~~~~~~~-~~~~~~~~~~d~~~~~~~~v~~l~~~---------g~D~iI~l~H~g~~~d-------------- 223 (546)
T 4h2g_A 168 VGIVGYTSKETPFL-SNPGTNLVFEDEITALQPEVDKLKTL---------NVNKIIALGHSGFEMD-------------- 223 (546)
T ss_dssp EEEEEEECTTHHHH-SCCCSSEEECCHHHHHHHHHHHHHHT---------TCCCEEEEEESCHHHH--------------
T ss_pred EEEEEecccccccc-cCCCCCcEEccHHHHHHHHHHHHHhc---------CCCEEEEEeccCccch--------------
Confidence 56677766311000 00111222223456677777777652 4568999999987431
Q ss_pred cCCCCCCChHHHHHHHH-cCCeeEEEeccCCCC
Q 015684 271 GISSASVNSGFFTTMVA-AGDVKAVFTGHDHVN 302 (402)
Q Consensus 271 ~~~~~~~~~~~l~~l~~-~~~v~~v~~GH~H~~ 302 (402)
..+.+ -.+|+++++||.|..
T Consensus 224 ------------~~la~~~~giDlIlgGHtH~~ 244 (546)
T 4h2g_A 224 ------------KLIAQKVRGVDVVVGGHSNTF 244 (546)
T ss_dssp ------------HHHHHHSTTCCEEECCSSCCC
T ss_pred ------------HHHHHhCCCCcEEEeCCcCcc
Confidence 12222 257999999999983
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=2e-07 Score=92.42 Aligned_cols=104 Identities=12% Similarity=0.130 Sum_probs=53.4
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCccCCCChhhHHHHHHHHHhHh
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~-~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
.+++|+++||+|-.-.... + ........+......+..+.+.++++.|+.+++ +||++.+. .......-...++.+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~-~-~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~l 81 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYK-V-PWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDIM 81 (509)
T ss_dssp EEEEEEEECCCTTCCSCBC-C-TTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHHH
T ss_pred eEEEEEEEccccCCccCcc-c-ccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHHH
Confidence 4699999999995432211 0 000000011123334455555566778998877 99965532 111111111223323
Q ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHh
Q 015684 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVT 151 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~ 151 (402)
...+.. ++++||||+..+ .+.+.+.+..
T Consensus 82 n~lg~D-~~tlGNHEfd~G--~~~l~~~l~~ 109 (509)
T 3ive_A 82 NTMPFD-AVTIGNHEFDHG--WDNTLLQLSQ 109 (509)
T ss_dssp TTSCCS-EECCCGGGGTTC--HHHHHHHHTT
T ss_pred HhcCCc-EEeecccccccC--HHHHHHHHhh
Confidence 234544 567899998554 4455565544
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.2e-07 Score=95.35 Aligned_cols=207 Identities=18% Similarity=0.221 Sum_probs=99.1
Q ss_pred CceEEEEEeccCCcCCCCC-----CCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhh--HHHHH
Q 015684 42 GEFKILQVADMHFANGKTT-----PCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATD--AAKSL 113 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~--~~~~~ 113 (402)
-+++|+|++|+|-.-.... .+.+ ...+......+..+.+.++++.|+ ++|.+||++.+..... ..+..
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~----~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~ 86 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQ----TKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSAD 86 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEE----EEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcc----cccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHH
Confidence 4699999999994432210 0000 000112233334444445556676 8899999655431100 01122
Q ss_pred HHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccc--cCCCCCccccc-cccce-EEeccCCCCCCCCce
Q 015684 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQ--VNPSDAHIIDG-FGNYN-LEIGGVKGSGFENKS 189 (402)
Q Consensus 114 ~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~g-~~~y~-~~~~~~~~~~~~~~~ 189 (402)
.+.+. ..+.. ++++||||+... .+.+.+++....+.+-. +.........+ +..|. +++.+ .
T Consensus 87 ~~~ln---~lg~D-~~tlGNHEfd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G---------~ 151 (579)
T 3ztv_A 87 AAVMN---AGNFH-YFTLGNHEFDAG--NEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDG---------E 151 (579)
T ss_dssp HHHHH---HHTCS-EEECCSGGGTTH--HHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETT---------E
T ss_pred HHHHH---hcCcC-eeeccccccccC--HHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECC---------E
Confidence 23333 34554 478999998533 45555665543322110 00000000101 11232 23333 2
Q ss_pred eEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccC
Q 015684 190 VLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQ 269 (402)
Q Consensus 190 ~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~ 269 (402)
.+.++.+.+.........+..++.-.+..+-+++.++++++. ....+|+++|.+....
T Consensus 152 kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~---------g~d~iI~l~H~G~~~d------------- 209 (579)
T 3ztv_A 152 KIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQ---------GINKIILLSHAGSEKN------------- 209 (579)
T ss_dssp EEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTT---------TCCCEEEEEETCHHHH-------------
T ss_pred EEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhC---------CCCEEEEEeccCchhh-------------
Confidence 366777744100000000112222223455577777777642 3557899999887431
Q ss_pred CcCCCCCCChHHHHHHHH-cCCeeEEEeccCCCC
Q 015684 270 EGISSASVNSGFFTTMVA-AGDVKAVFTGHDHVN 302 (402)
Q Consensus 270 ~~~~~~~~~~~~l~~l~~-~~~v~~v~~GH~H~~ 302 (402)
..+.+ -.+|+++++||.|..
T Consensus 210 -------------~~la~~~~giDlIlgGHtH~~ 230 (579)
T 3ztv_A 210 -------------IEIAQKVNDIDVIVTGDSHYL 230 (579)
T ss_dssp -------------HHHHHHCSSCCEEEECSSCCE
T ss_pred -------------HHHHHhCCCCCEEEeCCCCcc
Confidence 12222 246999999999983
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.8e-05 Score=74.13 Aligned_cols=103 Identities=19% Similarity=0.148 Sum_probs=52.1
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHH-------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLN------- 114 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~------- 114 (402)
+++|++++|+|-.-.... +.. ...........+..+.+.++++.|+ ++|-+||++.+. ....+....
T Consensus 11 ~l~Il~tnD~Hg~~~~~~-~~~---~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs-~~~~~~~~~~~~~g~~ 85 (341)
T 3gve_A 11 HLSILATTDIHANMMDYD-YYS---DKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGN-PLGEYAVKYQKDDIIS 85 (341)
T ss_dssp EEEEEEECCCTTCCSSEE-TTT---TEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS-HHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccCCCccCcc-ccC---CCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCc-HHHHHhhhcccccccc
Confidence 589999999996533311 100 0000112233334444445556665 667899965432 111111111
Q ss_pred -----HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 115 -----AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 115 -----~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
..+..+...+.- ++++||||+..+ .+.+.+.+....
T Consensus 86 ~g~~~~~~~~ln~lg~D-a~tlGNHEfd~G--~~~L~~~~~~~~ 126 (341)
T 3gve_A 86 GTKTHPIISVMNALKYD-AGTLGNHEFNYG--LDFLDGTIKGAD 126 (341)
T ss_dssp TSSCCHHHHHHHHTTCC-BEECCGGGGTTC--HHHHHHHHHTCS
T ss_pred cccccHHHHHHHhhCCC-eeeccchhhccC--HHHHHHHHHhcC
Confidence 122333335554 467899999654 455666665543
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.3e-05 Score=74.96 Aligned_cols=103 Identities=21% Similarity=0.196 Sum_probs=52.6
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHH-------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLN------- 114 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~------- 114 (402)
+++|++++|+|-.-.+.....+ .+ ........+..+.+.++++.++ ++|.+||++.+. ....+....
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~-~~---~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs-~~~~~~~~~~~~~g~~ 82 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKD-AA---TEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGS-PLGDYMAAKGLKEGDV 82 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTT-EE---CSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSS-HHHHHHHHHCCCTTCC
T ss_pred eEEEEEEeeCCCCcccccccCC-Cc---cccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCc-hhHHhhhhcccccccc
Confidence 6899999999965332110000 00 0112233334444545566666 778999965432 111121110
Q ss_pred -HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 115 -AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 115 -~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
..+..+...+.- ++++||||+..+ .+.+.+.+....
T Consensus 83 ~p~~~~mn~lg~D-~~t~GNHEfd~G--~~~l~~~~~~a~ 119 (339)
T 3jyf_A 83 HPVYKAMNTLNYA-VGNLGNHEFNYG--LDFLHKALAGAK 119 (339)
T ss_dssp CHHHHHHTTSCCS-EEECCGGGGTTC--HHHHHHHHHTCS
T ss_pred hHHHHHHHhcCCC-EEecchhhhhcc--HHHHHHHHHhcC
Confidence 123333335555 456899998654 455666665443
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.29 E-value=9.8e-05 Score=73.54 Aligned_cols=96 Identities=18% Similarity=0.093 Sum_probs=45.3
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
+++|+|++|+|-.-......................+..+.+.++++.|+ ++|-+||++.+.. ...+..-...+..+.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~-~~~~~~g~~~i~~mN 81 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTI-WFTVYKGAEVAHFMN 81 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSH-HHHHHTTHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchH-HHHHhCChHHHHHHh
Confidence 47899999999543221110000000001112233333344444556776 6677999655432 111111111222222
Q ss_pred hCCCCEEEEcCCCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTL 140 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~ 140 (402)
..+. =+.++||||+..+.
T Consensus 82 ~lgy-Da~~lGNHEFd~G~ 99 (530)
T 4h1s_A 82 ALRY-DAMALGNHEFDNGV 99 (530)
T ss_dssp HTTC-CEEECCGGGGTTTT
T ss_pred ccCC-CEEEEchhhhccCH
Confidence 2444 35688999997654
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=1.8e-05 Score=78.87 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=45.4
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCC-ChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhh----HHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCS-DLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATD----AAKSLN 114 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~----~~~~~~ 114 (402)
..+++|++++|+|-.-.......+.. .+.. -.+....+.+..++++|| ++|.+||++.+..... ..+...
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~----~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~ 88 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYH----ANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKST 88 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGC----CCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTH
T ss_pred ceEEEEEEEcccccCccCcccccccc----cccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHH
Confidence 46799999999997643221000000 0000 111222333322246788 5799999664421111 001122
Q ss_pred HHHhHhHhCCCCEEEEcCCCCCCCC
Q 015684 115 AAFAPAIASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 115 ~~l~~~~~~~iP~~~v~GNHD~~~~ 139 (402)
++++ ..+.. ++++||||+...
T Consensus 89 ~~ln---~lg~D-a~tlGNHEfD~G 109 (557)
T 3c9f_A 89 PIFI---KQDYD-LLTIGNHELYLW 109 (557)
T ss_dssp HHHT---TSCCS-EECCCGGGSSSH
T ss_pred HHHH---hcCCC-EEeecchhcccc
Confidence 3333 35655 567899999654
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.09 E-value=2.9e-06 Score=74.55 Aligned_cols=68 Identities=25% Similarity=0.222 Sum_probs=42.7
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCChhhHHHHHHHHHhH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAP 119 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~ 119 (402)
+..+||+++||+|-. ...+..+.+.+.. .++|.||++||++ +.+. ... +.+..
T Consensus 10 ~~~~~i~visDiHg~--------------------~~~l~~~l~~~~~~~~~d~~i~~GD~~-~~g~-~~~----~~~~~ 63 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGC--------------------YTNLMNKLDTIGFDNKKDLLISVGDLV-DRGA-ENV----ECLEL 63 (221)
T ss_dssp GGCSCEEEECCCTTC--------------------HHHHHHHHHHHTCCTTTCEEEECSCCS-SSSS-CHH----HHHGG
T ss_pred CCCceEEEEEcCCCC--------------------HHHHHHHHHHccCCCCCCEEEEeCCcc-CCCC-ChH----HHHHH
Confidence 456899999999921 1222333443333 3789999999954 4432 222 22332
Q ss_pred hHhCCCCEEEEcCCCCC
Q 015684 120 AIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~ 136 (402)
+. ..++++|+||||.
T Consensus 64 l~--~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 64 IT--FPWFRAVRGNHEQ 78 (221)
T ss_dssp GG--STTEEECCCHHHH
T ss_pred Hh--cCCEEEEccCcHH
Confidence 22 3589999999996
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.90 E-value=1e-05 Score=72.95 Aligned_cols=65 Identities=25% Similarity=0.297 Sum_probs=40.5
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
.||+++||+| +. ...+..+.+.+...++ |.+|++||++. .+. ...+.+ +.+..
T Consensus 19 ~~i~visDiH-g~-------------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd-~g~-~~~~~l-~~l~~--- 72 (262)
T 2qjc_A 19 GRVIIVGDIH-GC-------------------RAQLEDLLRAVSFKQGSDTLVAVGDLVN-KGP-DSFGVV-RLLKR--- 72 (262)
T ss_dssp SCEEEECCCT-TC-------------------HHHHHHHHHHHTCCTTTSEEEECSCCSS-SSS-CHHHHH-HHHHH---
T ss_pred CeEEEEeCCC-CC-------------------HHHHHHHHHHHhccCCCCEEEEecCCCC-CCC-CHHHHH-HHHHH---
Confidence 4999999999 21 1223444444444455 99999999554 432 223333 22221
Q ss_pred CCCCEEEEcCCCCC
Q 015684 123 SNIPWVAVLGNHDQ 136 (402)
Q Consensus 123 ~~iP~~~v~GNHD~ 136 (402)
.++++|+||||.
T Consensus 73 --~~~~~v~GNHd~ 84 (262)
T 2qjc_A 73 --LGAYSVLGNHDA 84 (262)
T ss_dssp --HTCEECCCHHHH
T ss_pred --CCCEEEeCcChH
Confidence 379999999996
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.88 E-value=9.3e-06 Score=73.86 Aligned_cols=67 Identities=19% Similarity=0.185 Sum_probs=40.8
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
|+|+++||+|-. ...+..+.+.+.. .++|.+|++||++. .+ +...+.+ +.+..
T Consensus 1 M~i~vigDiHG~--------------------~~~l~~ll~~~~~~~~~d~~v~lGD~vd-rG-~~s~~~l-~~l~~--- 54 (280)
T 2dfj_A 1 MATYLIGDVHGC--------------------YDELIALLHKVEFTPGKDTLWLTGDLVA-RG-PGSLDVL-RYVKS--- 54 (280)
T ss_dssp -CEEEECCCCSC--------------------HHHHHHHHHHTTCCTTTCEEEECSCCSS-SS-SCHHHHH-HHHHH---
T ss_pred CeEEEEecCCCC--------------------HHHHHHHHHHhCCCCCCCEEEEeCCcCC-CC-CccHHHH-HHHHh---
Confidence 689999999932 1222333444433 46899999999554 43 2233333 22322
Q ss_pred CCCCEEEEcCCCCC
Q 015684 123 SNIPWVAVLGNHDQ 136 (402)
Q Consensus 123 ~~iP~~~v~GNHD~ 136 (402)
...+++++.||||.
T Consensus 55 l~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 55 LGDSVRLVLGNHDL 68 (280)
T ss_dssp TGGGEEECCCHHHH
T ss_pred CCCceEEEECCCcH
Confidence 23479999999996
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00023 Score=64.19 Aligned_cols=75 Identities=13% Similarity=0.195 Sum_probs=42.9
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
.+|||++++|+|-..+. ......+.+.-++.++|++++.||...+.... . ....+.+.
T Consensus 3 ~~m~ilf~GDv~G~~G~-----------------~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~-~-~~~~~~ln--- 60 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGR-----------------NIIKNNLAQLKSKYQADLVIVNAENTTHGKGL-S-LKHYEFLK--- 60 (281)
T ss_dssp CCCEEEEECEEBHHHHH-----------------HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC-C-HHHHHHHH---
T ss_pred ceEEEEEECCcCChHHH-----------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc-C-HHHHHHHH---
Confidence 36899999999933210 11112233332334789999999966654211 1 12223333
Q ss_pred hCCCCEEEEcCCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~ 139 (402)
..++-++ +.|||++...
T Consensus 61 ~~G~Da~-TlGNHefD~g 77 (281)
T 1t71_A 61 EAGVNYI-TMGNHTWFQK 77 (281)
T ss_dssp HHTCCEE-ECCTTTTCCG
T ss_pred hcCCCEE-EEccCcccCC
Confidence 3566544 6699999766
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0062 Score=53.83 Aligned_cols=81 Identities=20% Similarity=0.284 Sum_probs=46.1
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++.|+=-..+ ...+..+...+.++. |++++.|...++..... + .....+.+.
T Consensus 1 m~ilfiGDi~g~~G------------------~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~---~~~~~l~~~ 56 (252)
T 2z06_A 1 MRVLFIGDVMAEPG------------------LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--R---RSYRLLREA 56 (252)
T ss_dssp CEEEEECCBCHHHH------------------HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--H---HHHHHHHHH
T ss_pred CEEEEEEecCCccc------------------HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--H---HHHHHHHhC
Confidence 68999999843221 122233344444556 99999888565432111 1 222223346
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
++-++ +.|||++... ++.+++...+
T Consensus 57 G~D~~-T~GNHefD~~----~l~~~l~~~~ 81 (252)
T 2z06_A 57 GVDLV-SLGNHAWDHK----EVYALLESEP 81 (252)
T ss_dssp TCCEE-ECCTTTTSCT----THHHHHHHSS
T ss_pred CCCEE-EeccEeeECc----hHHHHhccCC
Confidence 77775 7799999764 4556665544
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00048 Score=63.14 Aligned_cols=84 Identities=15% Similarity=0.109 Sum_probs=47.2
Q ss_pred CCCcceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-CCCEEEEcCCccCCCChhhH
Q 015684 31 KQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLIVFTGDNIFGFDATDA 109 (402)
Q Consensus 31 ~~~~~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~pD~vv~~GDli~~~~~~~~ 109 (402)
+++.-+++.....+|+++++|+|-. ...+..+.+.+... ..+.+|++||++. .| +..
T Consensus 47 ~ep~l~~l~~p~~~ri~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG-~~s 104 (315)
T 3h63_A 47 KLSTLVETTLKETEKITVCGDTHGQ--------------------FYDLLNIFELNGLPSETNPYIFNGDFVD-RG-SFS 104 (315)
T ss_dssp TSCSEEEECCCTTCEEEEECCCTTC--------------------HHHHHHHHHHHCCCBTTBCEEEESCCSS-SS-TTH
T ss_pred hCCCeEEEecCCCceEEEEecCCCC--------------------HHHHHHHHHHhCCCCCCCEEEEeCCccC-CC-cCh
Confidence 3444556665677999999999932 11222222222222 2346999999554 43 233
Q ss_pred HHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 110 AKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 110 ~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
.+.+..++.--...+-.++.+.||||.
T Consensus 105 ~evl~lL~~lk~~~p~~v~~lrGNHE~ 131 (315)
T 3h63_A 105 VEVILTLFGFKLLYPDHFHLLRGNHET 131 (315)
T ss_dssp HHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred HHHHHHHHHhhhhcCCcEEEEecCccc
Confidence 334332222111234469999999996
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00024 Score=65.21 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=42.5
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH-h
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI-A 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~-~ 122 (402)
.++++++|+|-. ...+..+.+.+....++.+|++||++. .| +...+.+.. +..+. .
T Consensus 50 ~~i~viGDIHG~--------------------~~~L~~ll~~~~~~~~~~~vflGD~VD-RG-~~s~evl~l-L~~lk~~ 106 (309)
T 2ie4_C 50 CPVTVCGDVHGQ--------------------FHDLMELFRIGGKSPDTNYLFMGDYVD-RG-YYSVETVTL-LVALKVR 106 (309)
T ss_dssp SSEEEECCCTTC--------------------HHHHHHHHHHHCCTTTSCEEECSCCSS-SS-TTHHHHHHH-HHHHHHH
T ss_pred CCEEEEecCCCC--------------------HHHHHHHHHHcCCCCCCEEEEeCCccC-CC-CChHHHHHH-HHHHHhh
Confidence 679999999931 122233334443456788999999654 43 223333322 22221 2
Q ss_pred CCCCEEEEcCCCCCC
Q 015684 123 SNIPWVAVLGNHDQE 137 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~ 137 (402)
.+-.++.+.||||..
T Consensus 107 ~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 107 YRERITILRGNHESR 121 (309)
T ss_dssp CTTTEEECCCTTSST
T ss_pred CCCcEEEEeCCCCHH
Confidence 344699999999985
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00023 Score=66.64 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=28.8
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCC
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYH 322 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~ 322 (402)
+...++.+++..+++.+++||+|........+|..+....+..|+
T Consensus 266 g~~~~~~fl~~~~~~~IV~GHt~~~~~~~~~~~~~i~Idsg~~~g 310 (342)
T 2z72_A 266 TEAELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIKVG 310 (342)
T ss_dssp CHHHHHHHHHHHTCSEEEECSSCCSSCEEETTTTEEECCCCGGGS
T ss_pred ChHHHHHHHHHCCCcEEEECCCcccchhhhcCCCEEEEECCCCCC
Confidence 345567777777799999999998543333455444444444454
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0068 Score=53.77 Aligned_cols=81 Identities=12% Similarity=0.131 Sum_probs=45.3
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++.|+= |.. ....++.+...+.++. |++++.|+...+.... .. ...+.+ ...
T Consensus 1 m~ilf~GDv~-g~~-----------------G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~-~~-~~~~~l---~~~ 56 (255)
T 1t70_A 1 MRVLFIGDVF-GQP-----------------GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGM-HR-DAARGA---LEA 56 (255)
T ss_dssp CEEEEECCBB-HHH-----------------HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSC-CH-HHHHHH---HHH
T ss_pred CEEEEEeccC-ChH-----------------HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCC-CH-HHHHHH---HhC
Confidence 6899999985 211 1122233334444455 9999999966554211 11 122333 345
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
++-++ +.|||++... ++.+++...+
T Consensus 57 G~Da~-TlGNHefD~~----~l~~~l~~~~ 81 (255)
T 1t70_A 57 GAGCL-TLGNHAWHHK----DIYPMLSEDT 81 (255)
T ss_dssp TCSEE-ECCTTTTSST----THHHHHHTTC
T ss_pred CCCEE-EeccccccCc----hHHHHHhhCC
Confidence 77655 5599999753 4556665544
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00036 Score=64.54 Aligned_cols=72 Identities=14% Similarity=0.085 Sum_probs=42.4
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
.++.+++|+|-. ...+..+.+.+.....|-+|++||+|. .| +...+.+.-++.--...
T Consensus 57 ~~i~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~vflGD~VD-RG-~~s~evl~lL~~lk~~~ 114 (330)
T 1fjm_A 57 APLKICGDIHGQ--------------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RG-KQSLETICLLLAYKIKY 114 (330)
T ss_dssp SSEEEECBCTTC--------------------HHHHHHHHHHHCSTTSSCEEECSCCSS-SS-SCHHHHHHHHHHHHHHS
T ss_pred CceEEecCCCCC--------------------HHHHHHHHHHhCCCCcceEEeCCCcCC-CC-CChHHHHHHHHHhhhhc
Confidence 579999999932 222233334333345688999999655 43 23333443222211123
Q ss_pred CCCEEEEcCCCCCC
Q 015684 124 NIPWVAVLGNHDQE 137 (402)
Q Consensus 124 ~iP~~~v~GNHD~~ 137 (402)
+-.++.+.||||..
T Consensus 115 p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 115 PENFFLLRGNHECA 128 (330)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCceEEecCCchHh
Confidence 45699999999973
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00084 Score=62.02 Aligned_cols=80 Identities=18% Similarity=0.180 Sum_probs=45.2
Q ss_pred ceeecCC--CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHH
Q 015684 35 KLRFRQN--GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAK 111 (402)
Q Consensus 35 ~l~~~~~--~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~ 111 (402)
.+++... ..+|+++++|+|-. ...+..+.+.+..... +.+|++||++. .| +...+
T Consensus 53 ~~~l~~p~~~~~ri~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG-~~s~e 110 (335)
T 3icf_A 53 MVELENNSTPDVKISVCGDTHGQ--------------------FYDVLNLFRKFGKVGPKHTYLFNGDFVD-RG-SWSCE 110 (335)
T ss_dssp EEEECCSSSTTCEEEEECCCTTC--------------------HHHHHHHHHHHCCCBTTEEEEECSCCSS-SS-TTHHH
T ss_pred eEEecCCcccCceEEEEecCCCC--------------------HHHHHHHHHHcCCCCCCcEEEEeCCccC-CC-cChHH
Confidence 3444433 67999999999942 2222233333322223 46999999554 43 23333
Q ss_pred HHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 112 SLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 112 ~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
.+..++.--...+-.++.+.||||.
T Consensus 111 vl~lL~~lk~~~p~~v~llrGNHE~ 135 (335)
T 3icf_A 111 VALLFYCLKILHPNNFFLNRGNHES 135 (335)
T ss_dssp HHHHHHHHHHHCTTTEEECCCTTSS
T ss_pred HHHHHHHHhhhCCCcEEEecCchhh
Confidence 4332222111234569999999996
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00069 Score=66.46 Aligned_cols=80 Identities=15% Similarity=0.123 Sum_probs=45.7
Q ss_pred ceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcC-CCEEEEcCCccCCCChhhHHHHH
Q 015684 35 KLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEK-PDLIVFTGDNIFGFDATDAAKSL 113 (402)
Q Consensus 35 ~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-pD~vv~~GDli~~~~~~~~~~~~ 113 (402)
.+..+....+++++++|+|-. ...+..+.+.+.... .|.+|++||++ +.| +...+.+
T Consensus 204 ~~~~~~~~~~~~~vigDiHG~--------------------~~~l~~~l~~~~~~~~~~~~v~lGD~v-drG-~~s~e~~ 261 (477)
T 1wao_1 204 LVETTLKETEKITVCGDTHGQ--------------------FYDLLNIFELNGLPSETNPYIFNGDFV-DRG-SFSVEVI 261 (477)
T ss_dssp EEEECCCSSCEEEEECBCTTC--------------------HHHHHHHHHHHCCCBTTBCEEEESCCS-SSS-TTHHHHH
T ss_pred eEEeecCCCcceEEEeCCCCC--------------------HHHHHHHHHHcCCCCCcCeEEEecccc-CCC-cchHHHH
Confidence 344444457899999999932 112222333222222 35799999955 444 2333344
Q ss_pred HHHHhHhHhCCCCEEEEcCCCCC
Q 015684 114 NAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 114 ~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
..++.--...+-+++.+.||||.
T Consensus 262 ~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 262 LTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp HHHHHHHHHSTTTEEEECCTTSS
T ss_pred HHHHHHHhhCCCceEeecCCccH
Confidence 33332112245689999999996
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0007 Score=65.22 Aligned_cols=83 Identities=16% Similarity=0.268 Sum_probs=53.7
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-----------hcCCCEEEEcCCccCCCCh---
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-----------AEKPDLIVFTGDNIFGFDA--- 106 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-----------~~~pD~vv~~GDli~~~~~--- 106 (402)
+...+|+.+||+|++..... ....++.+.+.+. ..++..||++||.+.+.+.
T Consensus 198 ~~~~~ialVSGL~igs~~~~--------------~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e 263 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGE--------------SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRD 263 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHH--------------HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC------
T ss_pred CCCCEEEEECCcccCCCccc--------------chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccch
Confidence 45679999999999975310 0123344444443 2478999999997776432
Q ss_pred ----------------hhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCC
Q 015684 107 ----------------TDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (402)
Q Consensus 107 ----------------~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~ 138 (402)
.+.++.+.+++..+. ..+|+.++|||||-..
T Consensus 264 ~~~~~~y~~~~~~~~~~~~~~~ld~~L~~l~-~~i~V~lmPG~~DP~~ 310 (476)
T 3e0j_A 264 SINKAKYLTKKTQAASVEAVKMLDEILLQLS-ASVPVDVMPGEFDPTN 310 (476)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHH-TTSCEEEECCTTSSSC
T ss_pred hhhhhhccccccchhhHHHHHHHHHHHHhcc-cCceEEecCCCCCccc
Confidence 123345555555543 6899999999999753
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00065 Score=61.78 Aligned_cols=71 Identities=14% Similarity=0.083 Sum_probs=41.9
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
.+|++++|+|-. ...+..+.+.+.....+.+|+.||++. .|. ...+.+.-.+.--...
T Consensus 56 ~~i~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~vfLGD~VD-rG~-~s~evl~lL~~lk~~~ 113 (299)
T 3e7a_A 56 APLKICGDIHGQ--------------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RGK-QSLETICLLLAYKIKY 113 (299)
T ss_dssp SSEEEECBCTTC--------------------HHHHHHHHHHHCSTTSSCEEECSCCSS-SSS-CHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCC--------------------HHHHHHHHHHhCCCCCccEEeCCcccC-CCC-CcHHHHHHHHHHHhhC
Confidence 368999999942 222333334333456688999999554 442 2333333222211123
Q ss_pred CCCEEEEcCCCCC
Q 015684 124 NIPWVAVLGNHDQ 136 (402)
Q Consensus 124 ~iP~~~v~GNHD~ 136 (402)
+-.++.+.||||.
T Consensus 114 p~~v~~lrGNHE~ 126 (299)
T 3e7a_A 114 PENFFLLRGNHEC 126 (299)
T ss_dssp TTTEEECCCTTSS
T ss_pred CCcEEEEecCchh
Confidence 4569999999997
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0011 Score=61.55 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=42.2
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
.++++++|+|-. ...+..+.+.......|.+|++||++. .| +...+.+...+.--...
T Consensus 70 ~pi~ViGDIHG~--------------------~~dL~~ll~~~g~~~~~~~vfLGD~VD-RG-~~s~Evl~lL~~lk~~~ 127 (357)
T 3ll8_A 70 APVTVCGDIHGQ--------------------FFDLMKLFEVGGSPANTRYLFLGDYVD-RG-YFSIECVLYLWALKILY 127 (357)
T ss_dssp SSEEEECCCTTC--------------------HHHHHHHHHHHCCTTTCCEEECSCCSS-SS-TTHHHHHHHHHHHHHHC
T ss_pred ccceeeccCCCC--------------------HHHHHHHHHhcCCCCCcEEEECCCccC-CC-cChHHHHHHHHHhhhhc
Confidence 469999999942 222233334333456789999999554 44 22333333222211123
Q ss_pred CCCEEEEcCCCCCC
Q 015684 124 NIPWVAVLGNHDQE 137 (402)
Q Consensus 124 ~iP~~~v~GNHD~~ 137 (402)
+-.++.+.||||..
T Consensus 128 p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 128 PKTLFLLRGNHECR 141 (357)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCcEEEEeCchhhh
Confidence 44699999999973
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0019 Score=62.69 Aligned_cols=26 Identities=4% Similarity=0.183 Sum_probs=22.2
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCc
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVND 303 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~ 303 (402)
+......++++.++++++-||.-..+
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v~~ 286 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQDA 286 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred CHHHHHHHHHHcCCcEEEEccchhcc
Confidence 55778999999999999999998743
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.041 Score=52.78 Aligned_cols=82 Identities=20% Similarity=0.234 Sum_probs=54.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-CCCEEEEcCCccCCCCh-------------
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLIVFTGDNIFGFDA------------- 106 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~pD~vv~~GDli~~~~~------------- 106 (402)
+.+++|++.|..+.....- +...+..+.+.++++ +||.+|+.|.+++....
T Consensus 145 ~~~l~ivvAsGPyT~sdnl---------------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~ 209 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNF---------------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 209 (460)
T ss_dssp SSCEEEEEEESCCSCSSCC---------------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTC
T ss_pred CCCcEEEEEeCCccCCCcc---------------ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccc
Confidence 4689999999999776431 334445566666554 89999999997765521
Q ss_pred ---hh-HHHHHHHHHhHhHh---CCCCEEEEcCCCCCC
Q 015684 107 ---TD-AAKSLNAAFAPAIA---SNIPWVAVLGNHDQE 137 (402)
Q Consensus 107 ---~~-~~~~~~~~l~~~~~---~~iP~~~v~GNHD~~ 137 (402)
.. ..+.+.+.+.++.+ ..+.+++|||+||..
T Consensus 210 ~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 210 KTQPKTLDELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp SSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred cccccCHHHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 11 12334444443332 456799999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 402 | ||||
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 3e-14 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 1e-08 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 3e-07 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 1e-05 | |
| d1ii7a_ | 333 | d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus | 7e-05 | |
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 0.002 |
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 71.0 bits (172), Expect = 3e-14
Identities = 42/295 (14%), Positives = 78/295 (26%), Gaps = 49/295 (16%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFG 103
F +AD+ +A+ + + S + E+ +V GD I G
Sbjct: 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVL-QWRRERVQCVVQLGDIIDG 62
Query: 104 FDATDAA--KSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP 161
+ A ++L+ A A ++ V GNH+ + + + + + T +
Sbjct: 63 HNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGS 122
Query: 162 S----------------------DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199
DA+ + G + NL L+
Sbjct: 123 DLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLP 182
Query: 200 DYSTVPS---VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF 256
S V G Q W + + L++ H+P+
Sbjct: 183 PVSVGLEQRFVKFNGGFSEQQLQWLDAVLTL----------SDHKQERVLIFSHLPVHPC 232
Query: 257 AYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGI 311
A + + + V GHDH C +G
Sbjct: 233 AADPICLAWNHEA-----------VLSVLRSHQSVLCFIAGHDHDGGRCTDSSGA 276
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 52.9 bits (125), Expect = 1e-08
Identities = 44/280 (15%), Positives = 75/280 (26%), Gaps = 62/280 (22%)
Query: 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNI 101
++ +L ++D H G V +N+ +PD IVFTGD
Sbjct: 3 PDYVLLHISDTHLIGGDRRLYGAVDADD----RLGELLEQLNQS--GLRPDAIVFTGDLA 56
Query: 102 FGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP 161
+ K A V V+GNHD + L + + +
Sbjct: 57 DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSM---------- 106
Query: 162 SDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWF 221
+ I ++ L G + +G I+ SQ W
Sbjct: 107 -------APLDRVCMID--------GLRIIVLDTSVPGHH--------HGEIRASQLGWL 143
Query: 222 EQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281
+ G + P + D + +R +
Sbjct: 144 AE-------------ELATPAPDGTILALHHPPIPSVLDMAVTVELR---------DQAA 181
Query: 282 FTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY 321
++ DV+A+ GH H GI + Y
Sbjct: 182 LGRVLRGTDVRAILAGHLH-YSTNATFVGIPVSVASATCY 220
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 49.4 bits (116), Expect = 3e-07
Identities = 45/348 (12%), Positives = 85/348 (24%), Gaps = 69/348 (19%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFG 103
+ + V D + ++ I + D I+ GDN +
Sbjct: 5 LRFVAVGDWGGVP----------NAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYF 54
Query: 104 FDATDA-----AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQ 158
DA ++ F+ N+PW + GNHD +S +
Sbjct: 55 TGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQ-------------IA 101
Query: 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN---LYFLDSGDYSTVPSVPGYGWIKP 215
+ Y L + + +L+ L S P P +
Sbjct: 102 YSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALAR 161
Query: 216 SQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSA 275
+Q W ++ AA K + + +
Sbjct: 162 TQLAWIKKQ-----------LAAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLP----- 205
Query: 276 SVNSGFFTTMVAAGDVKAVFTGHDHVNDFC--GRLTGIQLCYGGGFGYHAYGKAGWERRA 333
++ V A GHDH + G L G F +
Sbjct: 206 ---------LLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNG 256
Query: 334 RVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLT----GVDGHVLWSKT 377
+ + G+ V+ + + ++ G L+
Sbjct: 257 YLRFHFGAENSLGGFAYVE-------ITPKEMSVTYIEASGKSLFKTK 297
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 44.3 bits (103), Expect = 1e-05
Identities = 42/279 (15%), Positives = 72/279 (25%), Gaps = 65/279 (23%)
Query: 45 KILQVADMHFA--NGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIF 102
+ ++D HF K +DV + S LN E+PD +V +GD +
Sbjct: 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNA--------LRERPDAVVVSGDIVN 53
Query: 103 GFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162
+ A + N P + GNHD ++ ++ L L +
Sbjct: 54 CGRPEEY----QVARQILGSLNYPLYLIPGNHDDKALFLE-----YLQPLCPQLGSDANN 104
Query: 163 DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFE 222
+D F L F+DS T GW+ W E
Sbjct: 105 MRCAVDDFA-------------------TRLLFIDSSRAGT-----SKGWLTDETISWLE 140
Query: 223 QTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282
+ ++ H P
Sbjct: 141 AQLFEGGDKPAT------------IFMHHPPLPLGNAQMDPIACENGHR---------LL 179
Query: 283 TTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY 321
+ + +F GH+H + + G +
Sbjct: 180 ALVERFPSLTRIFCGHNHSLTM-TQYRQALISTLPGTVH 217
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 42.0 bits (97), Expect = 7e-05
Identities = 41/313 (13%), Positives = 76/313 (24%), Gaps = 54/313 (17%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIF-- 102
K +AD+H G + + E D I+ GD +F
Sbjct: 2 KFAHLADIHL--GYEQFHKPQREEEF-----AEAFKNALEIAVQENVDFILIAGD-LFHS 53
Query: 103 GFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162
+ K A +IP A+ GNHD T +
Sbjct: 54 SRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHD--------------RTQRGPSVLNLLE 99
Query: 163 DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFE 222
D ++ G ++ L L +G+Y
Sbjct: 100 DFGLVYVIGMRKEKVENE---------YLTSERLGNGEYLVKGVYKD-----LEIHGMKY 145
Query: 223 QTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282
+SA + + ++ H + E + ++ + +
Sbjct: 146 MSSAWFEANKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLPEG------- 198
Query: 283 TTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEK 342
GH H + +G + Y G +G +
Sbjct: 199 --------YLYYALGHIH-KRYETSYSGSPVVYPGSLERWDFGDYEVRYEWDGIKFKERY 249
Query: 343 TEKRGWGDVKSIK 355
+G+ V+ K
Sbjct: 250 GVNKGFYIVEDFK 262
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 37.6 bits (86), Expect = 0.002
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 72 GCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI---ASNIPWV 128
G S + T + +S +K ++F GD + + + + PW+
Sbjct: 17 GQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWI 76
Query: 129 AVLGNHDQE 137
GNH+ E
Sbjct: 77 WTAGNHEIE 85
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 402 | |||
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.96 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.96 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.93 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 99.91 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.87 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.82 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.81 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.72 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.45 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.43 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.38 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.37 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.15 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 99.14 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.88 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.8 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.48 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.09 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.55 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 95.25 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 94.38 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 94.33 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 93.63 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 93.44 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 92.84 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 92.02 |
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=3.5e-28 Score=219.41 Aligned_cols=234 Identities=21% Similarity=0.249 Sum_probs=148.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCccCCCChhhHHHHHHHHHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFA 118 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~ 118 (402)
...|||+||||+|+........... ...+.++.+.+.+++ .+||+||++|| +++.+.+++++.+.+.+.
T Consensus 2 ~~~~~i~~iSD~Hl~~~~~~~~~~~--------~~~~~l~~~i~~i~~~~~~pD~vl~~GD-l~~~g~~~~~~~~~~~l~ 72 (256)
T d2hy1a1 2 RPDYVLLHISDTHLIGGDRRLYGAV--------DADDRLGELLEQLNQSGLRPDAIVFTGD-LADKGEPAAYRKLRGLVE 72 (256)
T ss_dssp CCSEEEEEECCCCBC------------------CHHHHHHHHHHHHHHHTCCCSEEEECSC-CBSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEeeCccCCCCcccccCc--------CHHHHHHHHHHHHHhcCCCCCEEEECCC-CCCCCChhHHHHHHHHhh
Confidence 3589999999999976543211110 011223333333333 48999999999 667777788888888887
Q ss_pred HhH-hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEe
Q 015684 119 PAI-ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLD 197 (402)
Q Consensus 119 ~~~-~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lD 197 (402)
++. ..++|+++++||||. ...+.+.+ .. . ....+..+|.+.+.+ ++++++|
T Consensus 73 ~~~~~~~~p~~~v~GNHD~-----~~~~~~~~---~~--------~-~~~~~~~~~~~~~~~-----------~~~~~ld 124 (256)
T d2hy1a1 73 PFAAQLGAELVWVMGNHDD-----RAELRKFL---LD--------E-APSMAPLDRVCMIDG-----------LRIIVLD 124 (256)
T ss_dssp HHHHHHTCEEEECCCTTSC-----HHHHHHHT---TC--------C-CCCCSCCCEEEEETT-----------EEEEECC
T ss_pred hhhhhcCCCEEEEcccccc-----hhhhhhhh---cc--------c-cccccccceEEEecc-----------cceeeee
Confidence 655 358999999999995 22222221 11 0 001122346666665 8899999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCC
Q 015684 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (402)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~ 277 (402)
|.... . ..|.+.++|++||++.|++ ...+++|+++|||+......+ ... ....
T Consensus 125 t~~~~----~-~~g~~~~~~~~wl~~~L~~------------~~~~~~iv~~Hhpp~~~~~~~------~~~----~~~~ 177 (256)
T d2hy1a1 125 TSVPG----H-HHGEIRASQLGWLAEELAT------------PAPDGTILALHHPPIPSVLDM------AVT----VELR 177 (256)
T ss_dssp CBCTT----C-SSBCCCHHHHHHHHHHHTS------------CCTTCEEEECSSCSSCCSSHH------HHT----TSBC
T ss_pred eeecC----C-cCCcccHHHHHHHHHHHHh------------hhccCceeeeecCCccccccc------ccc----cccc
Confidence 85322 1 2567899999999998652 256789999999875421111 000 1224
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCC--------CCCCcceEEEEEe
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK--------AGWERRARVVVAS 339 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~--------~~~~~g~rv~ei~ 339 (402)
+++.+..++++++|++++|||+|. .....++|++++.+++++++.... ..-.+|++++++.
T Consensus 178 ~~~~~~~i~~~~~v~~~~~GH~H~-~~~~~~~gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~ 246 (256)
T d2hy1a1 178 DQAALGRVLRGTDVRAILAGHLHY-STNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVY 246 (256)
T ss_dssp CHHHHHHHHTTSSEEEEEECSSSS-CEEEEETTEEEEECCCCC-------------------CEEEEEEC
T ss_pred cHHHHHHHHhccCceEEEccccch-hhceEECCEEEEEcCCccccccccCCCCCcccccCCCCEEEEEEE
Confidence 677888899999999999999998 677788999999988887642110 1235688898886
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.96 E-value=2.8e-27 Score=215.18 Aligned_cols=212 Identities=19% Similarity=0.268 Sum_probs=137.0
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHH---HHh--cCCCEEEEcCCccCCCChhhHHHHHHHHHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRM---ISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFA 118 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~ 118 (402)
|||+||||+|++.......+ ..++.+.+.++ +++ ++||+||++|| +++.+..+.++.+.+.++
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~-----------~~~~~~~l~~~~~~i~~~~~~~D~vv~~GD-l~~~~~~~~y~~~~~~l~ 68 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYG-----------FIDVNAANADVVSQLNALRERPDAVVVSGD-IVNCGRPEEYQVARQILG 68 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTT-----------TBCHHHHHHHHHHHHHTCSSCCSEEEEESC-CBSSCCHHHHHHHHHHHT
T ss_pred CEEEEEecCcCCCCcccccc-----------CcCHHHHHHHHHHHHHhcCCCCCEEEECcc-cCcCCcchhHHHHHHHHh
Confidence 79999999999865432211 12222333333 332 58999999999 666677777777777776
Q ss_pred HhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeC
Q 015684 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (402)
Q Consensus 119 ~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs 198 (402)
+ .++|+++++||||.. ..+.+.+..... ... . ......|.+...+ ++++++||
T Consensus 69 ~---l~~p~~~i~GNHD~~-----~~~~~~~~~~~~---~~~-~----~~~~~~~~~~~~~-----------~~~i~ldt 121 (271)
T d3d03a1 69 S---LNYPLYLIPGNHDDK-----ALFLEYLQPLCP---QLG-S----DANNMRCAVDDFA-----------TRLLFIDS 121 (271)
T ss_dssp T---CSSCEEEECCTTSCH-----HHHHHHHGGGSG---GGC-S----CGGGCCEEECSSS-----------SEEEECCC
T ss_pred c---cCCCEEEEecCccch-----HHHHHHhhhhhh---ccc-c----ccCcceEEEecCC-----------eEEEeccc
Confidence 4 589999999999972 233333322111 110 0 1111234443333 78999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCC
Q 015684 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (402)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~ 278 (402)
... +. ..++++++|++||+++|++. +++++++++|||+......+. +. ....+
T Consensus 122 ~~~----~~-~~~~l~~~ql~wL~~~L~~~------------~~~~~iv~~Hh~p~~~~~~~~------d~----~~~~~ 174 (271)
T d3d03a1 122 SRA----GT-SKGWLTDETISWLEAQLFEG------------GDKPATIFMHHPPLPLGNAQM------DP----IACEN 174 (271)
T ss_dssp CCT----TC-SSBCCCHHHHHHHHHHHHHH------------TTSCEEEEESSCSSCCSCTTT------GG----GSBTT
T ss_pred ccC----CC-CcceecHHHHHHHHHHHhhh------------ccceeEEEeccCccccCcccc------cc----ccccc
Confidence 532 22 25679999999999987643 567899999998754322221 11 01234
Q ss_pred hHHHHHHHHc-CCeeEEEeccCCCCcccccCCCeeEEecCCccCC
Q 015684 279 SGFFTTMVAA-GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYH 322 (402)
Q Consensus 279 ~~~l~~l~~~-~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~ 322 (402)
.+.+.+++++ .+|+++||||+|. .....++|+++..+++++++
T Consensus 175 ~~~l~~~l~~~~~v~~vl~GH~H~-~~~~~~~g~~~~~~pst~~~ 218 (271)
T d3d03a1 175 GHRLLALVERFPSLTRIFCGHNHS-LTMTQYRQALISTLPGTVHQ 218 (271)
T ss_dssp THHHHHHHHHCTTEEEEEECSSSS-CEEEEETTEEEEECCCSSCB
T ss_pred hHHHHHHHHhcCCeEEEEeCCcch-hhceEECCEEEEEcCCceee
Confidence 5445555555 5899999999998 57778999999988888764
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.93 E-value=4.1e-25 Score=203.53 Aligned_cols=253 Identities=16% Similarity=0.149 Sum_probs=142.2
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHH---HHHHHhcCCCEEEEcCCccCCCCh--hhHHHHHHHHH
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFI---NRMISAEKPDLIVFTGDNIFGFDA--TDAAKSLNAAF 117 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~i~~~~pD~vv~~GDli~~~~~--~~~~~~~~~~l 117 (402)
-|||+++||+|++...... ....... . ...+++..+ .+.+++++||+||++||++.+... ....+.+.+++
T Consensus 3 ~f~f~~isD~h~~~~~~~~-~~~~~~~-~--~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~ 78 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGE-NYLRTRR-R--YYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVM 78 (320)
T ss_dssp SEEEEEECCCCBCSSCCEE-CTTSSSE-E--CTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCcc-ccccccc-h--hhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHH
Confidence 3899999999998543211 1100000 0 112233333 344567899999999996544321 12334555556
Q ss_pred hHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccc---cccceEEeccCCCCCCCCceeEEEE
Q 015684 118 APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDG---FGNYNLEIGGVKGSGFENKSVLNLY 194 (402)
Q Consensus 118 ~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g---~~~y~~~~~~~~~~~~~~~~~~~l~ 194 (402)
+.+...++|++.++||||.............. ...............+ ...+.....+ ++++
T Consensus 79 ~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 143 (320)
T d2nxfa1 79 AELDACSVDVHHVWGNHEFYNFSRPSLLSSRL----NSAQRTGTDTGSDLIGDDIYAYEFSPAPN-----------FRFV 143 (320)
T ss_dssp HHHHTTCSEEEECCCHHHHHHCCHHHHHTSTT----CCCC------CEECGGGTCCCEEEEEETT-----------EEEE
T ss_pred HHHHHcCCCEEEecccCccccccchhcccccc----cchhhhcccccccccCCCCccceeecCCC-----------eEEE
Confidence 66666799999999999975332211100000 0000000000000000 1111222222 5566
Q ss_pred EEeCCCCCCCC-------------------------------------CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCcc
Q 015684 195 FLDSGDYSTVP-------------------------------------SVPGYGWIKPSQQFWFEQTSARLQRAYMSKPA 237 (402)
Q Consensus 195 ~lDs~~~~~~~-------------------------------------~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~ 237 (402)
.+|+....... .....+.++++|++||+++|++.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~------- 216 (320)
T d2nxfa1 144 LLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH------- 216 (320)
T ss_dssp ECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-------
T ss_pred EecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-------
Confidence 66653221110 0112345889999999999998765
Q ss_pred ccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHc-CCeeEEEeccCCCCcccccCCCeeEEec
Q 015684 238 AQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCGRLTGIQLCYG 316 (402)
Q Consensus 238 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~-~~v~~v~~GH~H~~~~~~~~~gi~~~~~ 316 (402)
..+++|+++|+|+....... .+...+.+.+..++.+ .+|+++|+||+|.+.++...+|+.++..
T Consensus 217 ---~~~~viv~~H~p~~~~~~~~------------~~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~~~g~~~i~~ 281 (320)
T d2nxfa1 217 ---KQERVLIFSHLPVHPCAADP------------ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITL 281 (320)
T ss_dssp ---HTCEEEEEESSCCCTTSSCG------------GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEEC
T ss_pred ---cCCceEEEECCCCccCCCCC------------ccchhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeeccCCCEEEEC
Confidence 56789999999986532111 0112355545555555 4799999999999887888899988766
Q ss_pred CCccCCCCCCCCCCcceEEEEEee
Q 015684 317 GGFGYHAYGKAGWERRARVVVASL 340 (402)
Q Consensus 317 ~~~g~~~y~~~~~~~g~rv~ei~~ 340 (402)
++..-... -..+++++++..
T Consensus 282 ~~~~~~~~----~~~~~~~~~v~~ 301 (320)
T d2nxfa1 282 EGVIETPP----HSHAFATAYLYE 301 (320)
T ss_dssp CCGGGCCT----TSCEEEEEEECS
T ss_pred CeeecCCC----CCCCEEEEEEEC
Confidence 65432221 246899999974
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.91 E-value=3.4e-23 Score=191.17 Aligned_cols=262 Identities=16% Similarity=0.167 Sum_probs=154.3
Q ss_pred CCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHH-HHhcCCCEEEEcCCccCCCCh----hhHHHHHH
Q 015684 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRM-ISAEKPDLIVFTGDNIFGFDA----TDAAKSLN 114 (402)
Q Consensus 40 ~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-i~~~~pD~vv~~GDli~~~~~----~~~~~~~~ 114 (402)
++.++||++++|++... +..+.+... +...+|||||++||+++.++. ...++.+.
T Consensus 4 ~~~p~~F~v~GD~g~~~--------------------~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~ 63 (312)
T d2qfra2 4 LDVPYTFGLIGDLGQSF--------------------DSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWG 63 (312)
T ss_dssp SSCCEEEEEECSCCSBH--------------------HHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHH
T ss_pred CCCCEEEEEEeeCCCCC--------------------chHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHH
Confidence 46789999999987532 122333333 345789999999997654432 23556677
Q ss_pred HHHhHhHhCCCCEEEEcCCCCCCCCCCH---HHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeE
Q 015684 115 AAFAPAIASNIPWVAVLGNHDQESTLSR---EGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVL 191 (402)
Q Consensus 115 ~~l~~~~~~~iP~~~v~GNHD~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~ 191 (402)
+.++++. ..+|+++++||||....... +....+...+. .|..........+|++.+++ +
T Consensus 64 ~~~~~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~------~P~~~~~~~~~~~Ysf~~g~-----------v 125 (312)
T d2qfra2 64 RFTERSV-AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYH------VPYEASQSTSPFWYSIKRAS-----------A 125 (312)
T ss_dssp HHHHHHH-TTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCC------CCGGGGTCSSTTSEEEEETT-----------E
T ss_pred HHHHHHh-hcceEEEecccccccccccccccccccchhhhcc------CCccccCCCCCceEEEEECC-----------E
Confidence 7777654 57999999999997432110 01111111111 11110011122468899887 8
Q ss_pred EEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCc
Q 015684 192 NLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEG 271 (402)
Q Consensus 192 ~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~ 271 (402)
++++||+... .....+|++||++.|++..+ ...+++|++.|+|++...... ..+.
T Consensus 126 ~fi~Lds~~~---------~~~~~~Q~~WL~~~L~~~~~---------~~~~w~iv~~H~P~y~~~~~~-------~~~~ 180 (312)
T d2qfra2 126 HIIVLSSYSA---------YGRGTPQYTWLKKELRKVKR---------SETPWLIVLMHSPLYNSYNHH-------FMEG 180 (312)
T ss_dssp EEEECCTTSC---------CSTTSHHHHHHHHHHHTCCT---------TTCCEEEEECSSCSSCCBSTT-------TTTT
T ss_pred EEEEeecccc---------ccchHHHHHHHHHHHHHHhh---------cCCCEEEEEccccccccCCCC-------cccc
Confidence 9999999521 11356799999999875433 244568999999997521110 0000
Q ss_pred CCCCCCChHHHHHHHHcCCeeEEEeccCCCCccccc------------------CCCeeEEecCCccCC-----CCC--C
Q 015684 272 ISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR------------------LTGIQLCYGGGFGYH-----AYG--K 326 (402)
Q Consensus 272 ~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~------------------~~gi~~~~~~~~g~~-----~y~--~ 326 (402)
......|+.|+.+++|+++|+||+|..++... ..|...+..|+.|.. .+. .
T Consensus 181 ----~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~ 256 (312)
T d2qfra2 181 ----EAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQ 256 (312)
T ss_dssp ----HHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSC
T ss_pred ----hhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECcCCCcccccccccCCC
Confidence 01235678888899999999999998543221 123333334444411 111 1
Q ss_pred CCC------CcceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecC
Q 015684 327 AGW------ERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377 (402)
Q Consensus 327 ~~~------~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~ 377 (402)
+.| ..|+-.+++.. + .+-..+|++..++.....|+.||+..-
T Consensus 257 ~~~s~~~~~~~G~~~l~v~n---~------t~l~~~~~~~~d~~~~~~D~~~i~~~~ 304 (312)
T d2qfra2 257 PEYSAFREASFGHGMFDIKN---R------THAHFSWNRNQDGVAVEADSVWFFNRH 304 (312)
T ss_dssp CTTEEEEECCCEEEEEEECS---S------SEEEEEEEESSSCTTCCSEEEEEECTT
T ss_pred CCeeEEEecCCCEEEEEEEc---C------CeEEEEEEECCCCCEEeeeEEEEEeCC
Confidence 112 22666666641 1 234567888888875445888887764
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.87 E-value=4.1e-22 Score=183.00 Aligned_cols=226 Identities=18% Similarity=0.237 Sum_probs=132.6
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh-HHHHHHHHH---
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-AAKSLNAAF--- 117 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~-~~~~~~~~l--- 117 (402)
..+||++++|+|.+........ ......+.|.+.+++++|||||++||+++..+... ....+.+.+
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~ 72 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTA----------REMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDV 72 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCH----------HHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTT
T ss_pred CCeEEEEEecCCCCCCcccccH----------HHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHH
Confidence 4789999999997755432110 01223356677777899999999999886654321 111222222
Q ss_pred -hHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEE
Q 015684 118 -APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFL 196 (402)
Q Consensus 118 -~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~l 196 (402)
......++|+++++||||......... .+.. ..+ ....+..+|........ ....+.++++
T Consensus 73 ~~~~~~~~~P~~~~~GNHD~~~~~~~~~---~~~~-------~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~l 134 (302)
T d1utea_ 73 FSDPSLRNVPWHVLAGNHDHLGNVSAQI---AYSK-------ISK---RWNFPSPYYRLRFKIPR-----SNVSVAIFML 134 (302)
T ss_dssp SCSGGGTTCCEEECCCHHHHHSCHHHHH---HGGG-------TST---TEECCSSSEEEEEECTT-----SSCEEEEEEC
T ss_pred hhhhhhcCCceEEeeccccccccccccc---chhh-------ccc---cccCCCcccceeecccC-----CCCcEEEEEc
Confidence 333457899999999999855432211 1111 000 01111123444333211 1123778888
Q ss_pred eCCCCC--------CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCccccc
Q 015684 197 DSGDYS--------TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVR 268 (402)
Q Consensus 197 Ds~~~~--------~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~ 268 (402)
|+.... ..+.......+.++|++||++.|++ .+.+++|++.|||++...... ..
T Consensus 135 dt~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~------------~~~~~~iv~~h~~~~~~~~~~------~~ 196 (302)
T d1utea_ 135 DTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA------------AKEDYVLVAGHYPVWSIAEHG------PT 196 (302)
T ss_dssp CHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHH------------CCCSEEEEECSSCSSCCSSSC------CC
T ss_pred cceeEeecccccccccccccccchhHHHHHHHHHHHHHh------------hccCceEEEEeccccccCCCC------Cc
Confidence 873110 0011111223668899999999764 256789999999986521110 00
Q ss_pred CCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCcc
Q 015684 269 QEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFG 320 (402)
Q Consensus 269 ~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g 320 (402)
......+..|+++++|+++||||+|..++....+++.++.+++.|
T Consensus 197 -------~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~~~~~~~~i~~g~g~ 241 (302)
T d1utea_ 197 -------HCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGN 241 (302)
T ss_dssp -------HHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSS
T ss_pred -------hhhhhhhhHHHHhcCceEEEeCCCcceEEEecCCccEEEEeCCCC
Confidence 012256778888889999999999987666666787776655544
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.82 E-value=1e-19 Score=159.55 Aligned_cols=216 Identities=9% Similarity=-0.026 Sum_probs=122.5
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
...+|+.+||+|- ..++++.+.+.+.++++|+||++||++........+..+.+. +.
T Consensus 4 ~~~~i~~~sd~hg--------------------~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~---L~ 60 (228)
T d1uf3a_ 4 TVRYILATSNPMG--------------------DLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRI---LS 60 (228)
T ss_dssp CCCEEEEEECCTT--------------------CHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHH---HG
T ss_pred cccEEEEEeCCCC--------------------CHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhh---hc
Confidence 4568999999994 355667777777889999999999954433333444444444 44
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~ 201 (402)
+.++|+++|+||||................. +. .......+.....+ +.+..+++...
T Consensus 61 ~~~~pv~~i~GNHD~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 118 (228)
T d1uf3a_ 61 EAHLPTAYVPGPQDAPIWEYLREAANVELVH--------PE---MRNVHETFTFWRGP-----------YLVAGVGGEIA 118 (228)
T ss_dssp GGCSCEEEECCTTSCSHHHHHHHHHHHHHHC--------TT---EEECBTSEEEETTT-----------EEEEEECSEEE
T ss_pred cccceEEEEecCCCchhhhhhhhhccccccc--------cc---ccccceeeeeccCC-----------EEEEecCCccc
Confidence 5799999999999973221111111110000 00 00000112222111 44555544211
Q ss_pred CCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChH
Q 015684 202 STVP-SVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSG 280 (402)
Q Consensus 202 ~~~~-~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 280 (402)
.... ...........+..|+.+.++. ....+.|+++|+|+..... . ..++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~l~~------------~~~~~~il~~H~p~~~~~~---------~-------~~~~~ 170 (228)
T d1uf3a_ 119 DEGEPEEHEALRYPAWVAEYRLKALWE------------LKDYPKIFLFHTMPYHKGL---------N-------EQGSH 170 (228)
T ss_dssp SSSCCBSSSSCEEEHHHHHHHHGGGGG------------SCSCCEEEEESSCBCBTTT---------B-------TTSBH
T ss_pred cCcCcchhhhhhhhHHHHHHHHHHHhh------------ccCCceEEEEeeeccCccc---------c-------ccccH
Confidence 1111 1112334567788888776432 2567899999998853210 0 12456
Q ss_pred HHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEeec
Q 015684 281 FFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLE 341 (402)
Q Consensus 281 ~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~~~ 341 (402)
.+..+++..++++++|||+|.. . ...++.++++.|+.+- .++.+++++..
T Consensus 171 ~~~~~~~~~~~~lvl~GH~H~~-~-~~~g~~~~v~pG~~~~---------g~y~~i~~~~~ 220 (228)
T d1uf3a_ 171 EVAHLIKTHNPLLVLVAGKGQK-H-EMLGASWVVVPGDLSE---------GEYSLLDLRAR 220 (228)
T ss_dssp HHHHHHHHHCCSEEEECCSSCE-E-EEETTEEEEECCBGGG---------TEEEEEETTTT
T ss_pred HHHHHHHhcCCcEEEEcccccc-h-hccCCEEEEECCcccc---------ceEEEEEccCC
Confidence 6677777778999999999983 3 2345556655544331 24667877643
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.81 E-value=2e-19 Score=160.48 Aligned_cols=222 Identities=12% Similarity=0.036 Sum_probs=119.1
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh-H------------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-A------------ 109 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~-~------------ 109 (402)
+.||+++||+|... +.++.+.+.+++++||+||++|| +++.+.+. .
T Consensus 2 ~~ri~~isD~h~~~--------------------~~l~~l~~~~~~~~~D~vli~GD-l~~~~~~~~~~~~~~~~~~~~~ 60 (257)
T d2yvta1 2 PRKVLAIKNFKERF--------------------DLLPKLKGVIAEKQPDILVVVGN-ILKNEALEKEYERAHLARREPN 60 (257)
T ss_dssp CCEEEEEECCTTCG--------------------GGHHHHHHHHHHHCCSEEEEESC-CCCCHHHHHHHHHHHHTTCCCC
T ss_pred CcEEEEEeCCCCCH--------------------HHHHHHHHHHhhcCCCEEEEecc-cCCCCCCCHHHHHHHHhhhhhc
Confidence 46999999999422 33466778888899999999999 55543221 1
Q ss_pred -----------HHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEec
Q 015684 110 -----------AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIG 178 (402)
Q Consensus 110 -----------~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~ 178 (402)
...+...+..+.+.++|+++++||||.... ....+.+.... . ... ............
T Consensus 61 ~~~~~~~~n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~---~~~~~~~~~~~-----~-~~~---~~~~~~~~~~~~ 128 (257)
T d2yvta1 61 RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAET-----A-YPN---IRVLHEGFAGWR 128 (257)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTT-----T-CTT---EEECSSEEEEET
T ss_pred eeeeccccccchhhHHHHHHHHHhcCCcEEEEeCCCcchhh---HHHHHhccccc-----c-ccc---cccccceeEEec
Confidence 123345566666789999999999996321 11111111100 0 000 000011111111
Q ss_pred cCCCCCCCCceeEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhc
Q 015684 179 GVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAY 258 (402)
Q Consensus 179 ~~~~~~~~~~~~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~ 258 (402)
+ .+.+..+++..................+..|+...+. . ....+.|+++|+|+.....
T Consensus 129 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~Il~~H~pp~~~~~ 186 (257)
T d2yvta1 129 G----------EFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVN---E---------LKPRRLVTIFYTPPIGEFV 186 (257)
T ss_dssp T----------TEEEEEECSEEESSCCBSSSSCEEEHHHHHHHGGGGG---G---------SCCCEEEEEESSCCSCSST
T ss_pred C----------CeEEEEeccccCCccccchhhhhhhhhHHHHHHHHhh---h---------cccccEEEEEccccccccc
Confidence 1 0445555442110110110111122223333333211 1 3667899999998854211
Q ss_pred ccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEE
Q 015684 259 FDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVA 338 (402)
Q Consensus 259 ~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei 338 (402)
.. ... .....++..+..+++..++++++|||+|.. . ...++.++++.|+...+ ++.++++
T Consensus 187 ~~-------~~~--~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~-~-~~~g~~~~~~pGs~~~g---------~y~~id~ 246 (257)
T d2yvta1 187 DR-------TPE--DPKHHGSAVVNTIIKSLNPEVAIVGHVGKG-H-ELVGNTIVVNPGEFEEG---------RYAFLDL 246 (257)
T ss_dssp TC-------BTT--BSCCCSCHHHHHHHHHHCCSEEEECSSCCE-E-EEETTEEEEECCBGGGT---------EEEEEET
T ss_pred cc-------ccc--chhhhhhHHHHHhhhhcCCcEEEEEeecCC-e-EecCCeEEEECCccccC---------EEEEEEE
Confidence 11 011 112345677788888888999999999983 3 34567777776654332 3557766
Q ss_pred e
Q 015684 339 S 339 (402)
Q Consensus 339 ~ 339 (402)
.
T Consensus 247 ~ 247 (257)
T d2yvta1 247 T 247 (257)
T ss_dssp T
T ss_pred e
Confidence 5
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.72 E-value=1.2e-17 Score=154.58 Aligned_cols=243 Identities=16% Similarity=0.163 Sum_probs=122.9
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCC--hhhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD--ATDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~--~~~~~~~~~~~l~~~~ 121 (402)
|||+|+||+|+|...... +.+.. ...++++.+.+.+.+.+||+||++|| +++.+ .......+.+.+..+.
T Consensus 1 Mkilh~SDlHlG~~~~~~-----~~~~~--~~~~~l~~iv~~a~~~~~D~vli~GD-lfd~~~~~~~~~~~~~~~~~~l~ 72 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHK-----PQREE--EFAEAFKNALEIAVQENVDFILIAGD-LFHSSRPSPGTLKKAIALLQIPK 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-----HHHHH--HHHHHHHHHHHHHHHTTCSEEEEESC-SBSSSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCcCCCCCcCc-----hhHHH--HHHHHHHHHHHHHHHcCCCEEEECCC-CCCCCCCCHHHHHHHHHHHhhHH
Confidence 799999999998643210 00000 01234455555556789999999999 55443 2344555667777777
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccce-EEeccCCCCCCCCceeEEEEEEeCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYN-LEIGGVKGSGFENKSVLNLYFLDSGD 200 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~-~~~~~~~~~~~~~~~~~~l~~lDs~~ 200 (402)
..++|+++++||||...... ...+.+...... ....... .... ..+. ....+. . . .......
T Consensus 73 ~~~i~v~~i~GNHD~~~~~~--~~~~~~~~~~~~-~~~~~~~-~~~~--~~~~~~~~~~~-~--------~-~~~~~~~- 135 (333)
T d1ii7a_ 73 EHSIPVFAIEGNHDRTQRGP--SVLNLLEDFGLV-YVIGMRK-EKVE--NEYLTSERLGN-G--------E-YLVKGVY- 135 (333)
T ss_dssp TTTCCEEEECCTTTCCSSSC--CHHHHHHHTTSC-EECEEES-SCCC--SSSEEEEECTT-S--------C-EEEEEEE-
T ss_pred hcCCcEEEeCCCCccccchh--hHHHHHHhCCce-EEccCcc-cccc--cceecccccCc-c--------e-eEeeccc-
Confidence 78999999999999865433 122222221111 0000000 0000 1111 111110 0 0 0111110
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChH
Q 015684 201 YSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSG 280 (402)
Q Consensus 201 ~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 280 (402)
......+..+......++..+.+.... ......+++.|+............ .... .
T Consensus 136 --~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~~h~~~~~~~~~~~~~-----~~~~-----~-- 191 (333)
T d1ii7a_ 136 --KDLEIHGMKYMSSAWFEANKEILKRLF----------RPTDNAILMLHQGVREVSEARGED-----YFEI-----G-- 191 (333)
T ss_dssp --TTEEEEEECCCCHHHHHSSTTHHHHHC----------CCCSSEEEEEECCBHHHHHTTTCC-----CCSB-----C--
T ss_pred --CcceeccccchhHHHHHHHHhhhhhhc----------CCCccceEEEeecccccccccccc-----ceec-----c--
Confidence 000000122334444443433333222 256788899999765432222110 0000 0
Q ss_pred HHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 281 FFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 281 ~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
.... ..+++++++||.|. ......+|..++|+|+.....++..+...|+-++.+.
T Consensus 192 --~~~~-~~~~d~v~lGH~H~-~~~~~~~~~~i~y~GS~~~~~~~E~~~~~g~~~~~~~ 246 (333)
T d1ii7a_ 192 --LGDL-PEGYLYYALGHIHK-RYETSYSGSPVVYPGSLERWDFGDYEVRYEWDGIKFK 246 (333)
T ss_dssp --GGGS-CTTCSEEEEESCSS-CEEEEETTEEEEECCCSSCCSGGGCSEEEEECSSSEE
T ss_pred --cccC-ccccceEEecCccc-ceEEeeCCeEEEEeCCceeeccccccccCceEEEEEe
Confidence 1111 23589999999998 4555678899999998876666654434454444443
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.45 E-value=8e-13 Score=110.90 Aligned_cols=58 Identities=12% Similarity=-0.034 Sum_probs=40.2
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccC--CCCCCCCCCcceEEEEEe
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY--HAYGKAGWERRARVVVAS 339 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~--~~y~~~~~~~g~rv~ei~ 339 (402)
+.+..+.+..+.+++++||+|. ......+|+.++..||.+. ++.+ ....+.|-+++++
T Consensus 97 ~~l~~~~~~~~~divi~GHTH~-p~~~~~~~~~~iNPGSv~~pr~~~~-~~~~~syaild~~ 156 (182)
T d1z2wa1 97 ASLALLQRQFDVDILISGHTHK-FEAFEHENKFYINPGSATGAYNALE-TNIIPSFVLMDIQ 156 (182)
T ss_dssp HHHHHHHHHHSSSEEECCSSCC-CEEEEETTEEEEECCCTTCCCCSSC-SCCCCEEEEEEEE
T ss_pred HHHHHHHhccCCCEEEECCcCc-ceEEEECCEEEEeCCCCCCCCCCCC-CCCCCEEEEEEEe
Confidence 3345555666789999999999 4666778988888777653 1211 1235678888887
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.43 E-value=3.4e-12 Score=105.50 Aligned_cols=63 Identities=22% Similarity=0.265 Sum_probs=45.9
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++||+|- ....++.+.+.+++++||.|+++||++ +. ..+..+...
T Consensus 1 MkI~iiSDiHg--------------------n~~al~~vl~~~~~~~~D~ii~~GD~~-~~----------~~~~~l~~~ 49 (165)
T d1s3la_ 1 MKIGIMSDTHD--------------------HLPNIRKAIEIFNDENVETVIHCGDFV-SL----------FVIKEFENL 49 (165)
T ss_dssp CEEEEECCCTT--------------------CHHHHHHHHHHHHHSCCSEEEECSCCC-ST----------HHHHHGGGC
T ss_pred CEEEEEEeCCC--------------------CHHHHHHHHHHHHhcCCCEEEECCCcc-CH----------HHHHHHhhc
Confidence 79999999993 233445566666778999999999944 32 122334456
Q ss_pred CCCEEEEcCCCCCC
Q 015684 124 NIPWVAVLGNHDQE 137 (402)
Q Consensus 124 ~iP~~~v~GNHD~~ 137 (402)
..|++.+.||||..
T Consensus 50 ~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 50 NANIIATYGNNDGE 63 (165)
T ss_dssp SSEEEEECCTTCCC
T ss_pred CccEEEEccccccc
Confidence 78999999999973
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.38 E-value=8.6e-14 Score=123.09 Aligned_cols=82 Identities=6% Similarity=-0.041 Sum_probs=49.8
Q ss_pred CCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHH-cCCeeEEEeccCCCCcccccCCCeeEEecCCcc
Q 015684 242 PAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVA-AGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFG 320 (402)
Q Consensus 242 ~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~-~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g 320 (402)
....++++|+++....... ..+......+..... ..+++++++||+|. ......++..++.+|+.|
T Consensus 129 ~~~~~~~~H~~p~~~~~~~------------~~~~~~~~~~~~~~~~~~~~d~vv~GHtH~-~~~~~~~~~~~in~Gsvg 195 (251)
T d1nnwa_ 129 GGNEVFGVYGSPINPFDGE------------VLAEQPTSYYEAIMRPVKDYEMLIVASPMY-PVDAMTRYGRVVCPGSVG 195 (251)
T ss_dssp TTEEEEEESSCSSCTTTCC------------CCSSCCHHHHHHHHGGGTTSSEEEESTTCS-EEEEEETTEEEEEECCSS
T ss_pred CCCcEEEEecCccCcccch------------hhhhhHHHHHhhhcccccCceEEEEeccce-EEEEEeeeeecccccccc
Confidence 3457888998653311110 011123344444443 34689999999999 677778899999888888
Q ss_pred CCCCCCCCCCcceEEEEE
Q 015684 321 YHAYGKAGWERRARVVVA 338 (402)
Q Consensus 321 ~~~y~~~~~~~g~rv~ei 338 (402)
...-+. ....|-++|+
T Consensus 196 ~~~~g~--~~~~y~i~d~ 211 (251)
T d1nnwa_ 196 FPPGKE--HKATFALVDV 211 (251)
T ss_dssp SCSSSS--CCEEEEEEET
T ss_pred ccCCCC--CCCeEEEEEc
Confidence 654332 2334556554
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.37 E-value=8.7e-12 Score=105.67 Aligned_cols=59 Identities=15% Similarity=0.031 Sum_probs=42.0
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCC--CCCCcceEEEEEee
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK--AGWERRARVVVASL 340 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~--~~~~~g~rv~ei~~ 340 (402)
..+..+....+++++++||+|. .+....+|+.++..||.|. .++. ....+.|-+++++.
T Consensus 109 ~~l~~~~~~~~~dvvi~GHTH~-~~~~~~~g~~~iNPGSvg~-pr~~~~~~~~~syaild~~~ 169 (193)
T d2a22a1 109 GSLEQWQRRLDCDILVTGHTHK-LRVFEKNGKLFLNPGTATG-AFSALTPDAPPSFMLMALQG 169 (193)
T ss_dssp HHHHHHHHHHTCSEEEECSSCC-CEEEEETTEEEEECCCSSC-CCCTTSTTCCCEEEEEEEET
T ss_pred HHHHHHHhhcCCCEEEEcCccC-ceEEEECCEEEEECCCCCc-CcCCCCCCCCCEEEEEEEEC
Confidence 4566677777799999999999 5667789998887777662 2221 12345788888873
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.15 E-value=8.3e-10 Score=91.42 Aligned_cols=56 Identities=14% Similarity=-0.044 Sum_probs=39.8
Q ss_pred HHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 281 FFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 281 ~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
.+..+....+.+++++||+|. .+....+|+.++..||.|..--+. ..+.|-+++++
T Consensus 93 ~l~~~~~~~~~dvvi~GHTH~-p~~~~~~~~~~iNPGSvg~pr~~~--~~~syail~~~ 148 (173)
T d3ck2a1 93 KLDYWAQEEEAAICLYGHLHV-PSAWLEGKILFLNPGSISQPRGTI--RECLYARVEID 148 (173)
T ss_dssp HHHHHHHHTTCSEEECCSSCC-EEEEEETTEEEEEECCSSSCCTTC--CSCCEEEEEEC
T ss_pred HHHHHHHhcCCCEEEeCCcCc-ceEEEECCEEEEECCCCCCCCCCC--CCCEEEEEEEe
Confidence 345555666799999999999 566678999999888887432121 13467788876
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=1.4e-10 Score=97.30 Aligned_cols=72 Identities=18% Similarity=0.229 Sum_probs=48.0
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh-h--HHHHHHHHHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-D--AAKSLNAAFAPA 120 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~-~--~~~~~~~~l~~~ 120 (402)
|||+++||+|- ....++.+.+.++++++|.||++||++ +.+.. . ......+.+..+
T Consensus 2 Mki~iiSDiHg--------------------~~~al~~vl~~~~~~~~D~iv~~GDiv-~~g~~~~~~~~~~~~~~~~~~ 60 (184)
T d1su1a_ 2 MKLMFASDIHG--------------------SLPATERVLELFAQSGAQWLVILGDVL-NHGPRNALPEGYAPAKVVERL 60 (184)
T ss_dssp CEEEEECCCTT--------------------BHHHHHHHHHHHHHHTCSEEEECSCCS-CCCTTSCCCTTBCHHHHHHHH
T ss_pred cEEEEEeecCC--------------------CHHHHHHHHHHHhhcCCCEEEEcCccc-ccCccchhhhccCcHHHHHHH
Confidence 89999999992 123446666777778999999999954 44311 1 001111233334
Q ss_pred HhCCCCEEEEcCCCCC
Q 015684 121 IASNIPWVAVLGNHDQ 136 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~ 136 (402)
...+.|++++.||||.
T Consensus 61 ~~~~~~~~~v~GNhD~ 76 (184)
T d1su1a_ 61 NEVAHKVIAVRGNCDS 76 (184)
T ss_dssp HTTGGGEEECCCTTCC
T ss_pred HhcCCcEEEecCCCCc
Confidence 4467799999999997
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.88 E-value=7.7e-09 Score=86.55 Aligned_cols=78 Identities=17% Similarity=0.194 Sum_probs=45.3
Q ss_pred EEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|.++||+|++.......+... ......+.+.+..++ .+.|.|+++||+....+..+. +.+.++. +
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~-------~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~---~~~~l~~---L 70 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEV-------RFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNE---YLRIWKA---L 70 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTT-------CCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTS---HHHHHHH---S
T ss_pred EEEEeCcCCCCcchhhcCCCC-------CHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHH---HHHHHHH---C
Confidence 457999999865421111100 111223445555554 467999999995544332322 2344443 4
Q ss_pred CCCEEEEcCCCCC
Q 015684 124 NIPWVAVLGNHDQ 136 (402)
Q Consensus 124 ~iP~~~v~GNHD~ 136 (402)
+...+.|+||||.
T Consensus 71 ~g~~~lI~GNHD~ 83 (188)
T d1xm7a_ 71 PGRKILVMGNHDK 83 (188)
T ss_dssp SSEEEEECCTTCC
T ss_pred CCceEEEecCCCc
Confidence 5578999999997
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.80 E-value=9.8e-08 Score=87.32 Aligned_cols=95 Identities=15% Similarity=0.108 Sum_probs=47.3
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhH---HHHHHHHHHhcCCCEEE-EcCCccCCCChhhH---HHHHHH
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNT---TAFINRMISAEKPDLIV-FTGDNIFGFDATDA---AKSLNA 115 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~i~~~~pD~vv-~~GDli~~~~~~~~---~~~~~~ 115 (402)
+++|+|++|+|-.-.... ... ....+. ++.+++.+++.+++.++ -+||++.+.. ... .+...+
T Consensus 8 ~ltILhtnD~Hg~l~~~~-~~~--------~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~-~s~~~~g~~~~~ 77 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNE-YGE--------YGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVP-ESDLQDAEPDFR 77 (337)
T ss_dssp EEEEEEECCCTTCCSCCT-TSC--------CCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCH-HHHTTTTHHHHH
T ss_pred EEEEEEEeecccCCcCCC-CCC--------cCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCH-HHHHhCChHHHH
Confidence 589999999994322110 000 001122 23333333446677554 4899654331 111 122223
Q ss_pred HHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 116 AFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 116 ~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
.++ ..+.- ++++||||+..+ .+.+.++.....
T Consensus 78 ~mn---~~g~D-a~~~GNHEfd~G--~~~l~~~~~~~~ 109 (337)
T d1usha2 78 GMN---LVGYD-AMAIGNHEFDNP--LTVLRQQEKWAK 109 (337)
T ss_dssp HHH---HHTCC-EEECCGGGGSSC--HHHHHHHHHHCS
T ss_pred HHH---hcCCe-EEEechhhhccc--hHHHHHHHHhcC
Confidence 333 23544 567899999654 455656555543
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.48 E-value=4.1e-07 Score=82.49 Aligned_cols=90 Identities=19% Similarity=0.240 Sum_probs=44.3
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCC-hhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhH----HHHHHH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSD-LNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDA----AKSLNA 115 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~----~~~~~~ 115 (402)
++++|+|++|+|-.-...... +.....+.+ ......+.+..++.+++ +++-+||++.+..-... -....+
T Consensus 10 ~~l~iLhtnD~Hg~l~~~~~~----~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~ 85 (322)
T d3c9fa2 10 NDINFVHTTDTHGWYSGHINQ----PLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTP 85 (322)
T ss_dssp CSEEEEEECCCTTCTTCCSSC----GGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHH
T ss_pred CEEEEEEEeccccCCCCcccc----ccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHH
Confidence 689999999999532221100 000000001 12233444444556787 45569996654321110 012223
Q ss_pred HHhHhHhCCCCEEEEcCCCCCCCC
Q 015684 116 AFAPAIASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 116 ~l~~~~~~~iP~~~v~GNHD~~~~ 139 (402)
+++. .+. =++++||||+...
T Consensus 86 ~mn~---lgy-Da~t~GNHEfd~g 105 (322)
T d3c9fa2 86 IFIK---QDY-DLLTIGNHELYLW 105 (322)
T ss_dssp HHTT---SCC-SEECCCGGGSSSH
T ss_pred HHhc---cCC-cEEeecceecccc
Confidence 3332 232 3677899999654
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=98.09 E-value=4.9e-05 Score=67.75 Aligned_cols=204 Identities=15% Similarity=0.132 Sum_probs=96.1
Q ss_pred ceEEEEEeccCCcCCCCC-CCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHH--HHHHHHHh
Q 015684 43 EFKILQVADMHFANGKTT-PCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAA--KSLNAAFA 118 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~--~~~~~~l~ 118 (402)
+++|+|++|+|-.-.+.. .+.. ..........+..+.+.++++.| -+++-+||++.+....... ....+.++
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~----~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~n 77 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSG----EKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMH 77 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSS----SEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred EEEEEEEcccccCcccccccccC----CccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHhHhhhcchhHHHHHH
Confidence 478999999995322100 0000 00000122222333343444555 4677889966443211111 11223333
Q ss_pred HhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccC--CCCCccccc-cccceE-EeccCCCCCCCCceeEEEE
Q 015684 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN--PSDAHIIDG-FGNYNL-EIGGVKGSGFENKSVLNLY 194 (402)
Q Consensus 119 ~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~g-~~~y~~-~~~~~~~~~~~~~~~~~l~ 194 (402)
..+. =+.++||||+.. ..+.+.+......+.+-..+ -.......+ ...|.+ ...+ ..+.++
T Consensus 78 ---~~gy-Da~~~GNHEfd~--G~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g---------~kIgii 142 (302)
T d2z1aa2 78 ---RLRY-RAMALGNHEFDL--GPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGG---------ERVGII 142 (302)
T ss_dssp ---HTTC-CEEECCGGGGTT--CHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETT---------EEEEEE
T ss_pred ---hccc-ccccccchhhhc--ChhHHHHHhhhcccceeEeeeeccccccccCccceeEEEEECC---------eEEEEE
Confidence 2343 477899999964 44555555544332211111 011011111 222333 2222 225567
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCC
Q 015684 195 FLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISS 274 (402)
Q Consensus 195 ~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~ 274 (402)
.+-+....... .+...+.-....+.+++..++++++ ...-+|+++|....+.
T Consensus 143 G~~t~~~~~~~-~~~~~~~~~d~~~~~~~~~~~l~~~---------~~DiiV~l~H~g~~~d------------------ 194 (302)
T d2z1aa2 143 GLTTPDTREIS-NPGPTVAFLDPYESAQKAVYELLAK---------GVNKIVVLSHLGYGED------------------ 194 (302)
T ss_dssp EEECTTHHHHS-CCCTTCEECCHHHHHHHHHHHHHHT---------TCCCEEEEEESCHHHH------------------
T ss_pred ecccccccccc-cccCcccccCHHHHHHHHHHHhhcc---------CCCEEEEeeccCcchh------------------
Confidence 66653210000 1111222222345566666667652 4568999999987431
Q ss_pred CCCChHHHHHHHHc-CCeeEEEeccCCC
Q 015684 275 ASVNSGFFTTMVAA-GDVKAVFTGHDHV 301 (402)
Q Consensus 275 ~~~~~~~l~~l~~~-~~v~~v~~GH~H~ 301 (402)
..|.++ .+|++++.||.|.
T Consensus 195 --------~~la~~~~giD~ii~gh~h~ 214 (302)
T d2z1aa2 195 --------LKLARRLVGVQVIVGGHSHT 214 (302)
T ss_dssp --------HHHHTTCSSCCEEEECSSCC
T ss_pred --------hHHHhcCCCeeeeecCccce
Confidence 223333 4799999999997
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.55 E-value=3.6e-05 Score=65.09 Aligned_cols=64 Identities=27% Similarity=0.240 Sum_probs=40.7
Q ss_pred EEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 45 ~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
||++|||+|- ....++.+.+.+.. ...|.+|++||+|. .| ++..+.+ +-+ .
T Consensus 14 rI~vIgDIHG--------------------~~~~L~~lL~~i~~~~~~d~lv~lGD~vD-rG-p~s~~vl----~~l--~ 65 (219)
T d1g5ba_ 14 NIWVVGDLHG--------------------CYTNLMNKLDTIGFDNKKDLLISVGDLVD-RG-AENVECL----ELI--T 65 (219)
T ss_dssp CEEEECCCTT--------------------CHHHHHHHHHHHTCCTTTCEEEECSCCSS-SS-SCHHHHH----GGG--G
T ss_pred eEEEEEeccc--------------------CHHHHHHHHHHcCCCCCCCEEEEeCCccc-cC-ccHHHHH----HHh--h
Confidence 8999999992 23344455555543 46689999999555 43 3333333 222 2
Q ss_pred CCCEEEEcCCCCC
Q 015684 124 NIPWVAVLGNHDQ 136 (402)
Q Consensus 124 ~iP~~~v~GNHD~ 136 (402)
...+.++.||||.
T Consensus 66 ~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 66 FPWFRAVRGNHEQ 78 (219)
T ss_dssp STTEEECCCHHHH
T ss_pred ccccccccCcHHH
Confidence 3458899999996
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=95.25 E-value=0.56 Score=38.75 Aligned_cols=104 Identities=21% Similarity=0.281 Sum_probs=54.1
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++.|+=-..+ .+.++.....+. ++.||||..|.+.++... -..+...+++ +.
T Consensus 1 MkiLfiGDIvG~~G------------------r~~v~~~Lp~Lk-~~~DfVIaNgENaa~G~G-it~k~~~~L~----~~ 56 (252)
T d2z06a1 1 MRVLFIGDVMAEPG------------------LRAVGLHLPDIR-DRYDLVIANGENAARGKG-LDRRSYRLLR----EA 56 (252)
T ss_dssp CEEEEECCBCHHHH------------------HHHHHHHHHHHG-GGCSEEEEECTTTTTTSS-CCHHHHHHHH----HH
T ss_pred CeEEEEeccCCHHH------------------HHHHHHHhHHHH-hhCCEEEEeeeccCCCcC-CCHHHHHHHH----Hh
Confidence 68999999863322 122233333333 457999999997665422 1222333333 46
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEecc
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGG 179 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~ 179 (402)
++-+ ++.|||=.... ++.++...-+.-.+...|. ...|.|.+.+...+
T Consensus 57 GVDv-IT~GNH~wdkk----ei~~~i~~~~llRP~N~p~---~~PG~G~~i~~~~g 104 (252)
T d2z06a1 57 GVDL-VSLGNHAWDHK----EVYALLESEPVVRPLNYPP---GTPGKGFWRLEVGG 104 (252)
T ss_dssp TCCE-EECCTTTTSCT----THHHHHHHSSEECCTTSCS---SCSSCSEEEEEETT
T ss_pred CCCE-EEcCcccccch----hhhhhhccccccchhhccC---CCCCCcEEEEccCC
Confidence 8865 47799976433 3445554433111111122 24455655565543
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.38 E-value=0.11 Score=45.33 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=46.5
Q ss_pred CCcceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCC--EEEEcCCccCCCChh
Q 015684 32 QERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPD--LIVFTGDNIFGFDAT 107 (402)
Q Consensus 32 ~~~~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD--~vv~~GDli~~~~~~ 107 (402)
+++-+++.....-.+.++.|+|-.- .-+.+.++. ..|+ -.|++||.+ +.|.
T Consensus 48 e~~l~~i~~~~~~pv~VvGDiHGq~-----------------------~DL~~if~~~g~p~~~~~ylFLGDYV-DRG~- 102 (324)
T d1s95a_ 48 LSTLVETTLKETEKITVCGDTHGQF-----------------------YDLLNIFELNGLPSETNPYIFNGDFV-DRGS- 102 (324)
T ss_dssp SCSEEEECCCTTCEEEEECCCTTCH-----------------------HHHHHHHHHHCCCBTTBCEEEESCCS-SSST-
T ss_pred CCCeEEeecCCCCCEEEEEECCCCH-----------------------HHHHHHHHHCCCCCCCCeEEEecccc-cCcC-
Confidence 3334455444445788999999421 113333332 2332 489999955 5543
Q ss_pred hHHHHHHHHHhHhHhCCCCEEEEcCCCCCC
Q 015684 108 DAAKSLNAAFAPAIASNIPWVAVLGNHDQE 137 (402)
Q Consensus 108 ~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~ 137 (402)
...+.+.-.+.--....--++.+.||||..
T Consensus 103 ~slEvi~lL~~lKi~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 103 FSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp THHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred cceeehHHHHHHHHhCCCcEEeccCCcccc
Confidence 344454444433223456799999999973
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=94.33 E-value=0.52 Score=39.66 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=45.5
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
.+|||+++.|+=-..+. .-..+.+.++.++.++||||..|-+.++.... ..+...+++
T Consensus 3 ~~MkILfiGDIvG~~GR-----------------~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Gi-t~k~~~eL~---- 60 (281)
T d1t71a_ 3 NSIKFIFLGDVYGKAGR-----------------NIIKNNLAQLKSKYQADLVIVNAENTTHGKGL-SLKHYEFLK---- 60 (281)
T ss_dssp CCCEEEEECEEBHHHHH-----------------HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC-CHHHHHHHH----
T ss_pred ccceEEEEEccCCHHHH-----------------HHHHHHhHHHHHHhCCCEEEECCccCCCCcCC-CHHHHHHHH----
Confidence 57999999999643321 11123455555678999999999977654221 122222333
Q ss_pred hCCCCEEEEcCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQE 137 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~ 137 (402)
+.++-+ ++.|||=..
T Consensus 61 ~~GvDv-IT~GNH~wd 75 (281)
T d1t71a_ 61 EAGVNY-ITMGNHTWF 75 (281)
T ss_dssp HHTCCE-EECCTTTTC
T ss_pred HhCCcE-EEcCchhhh
Confidence 468865 477999653
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.63 E-value=0.099 Score=44.96 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=28.3
Q ss_pred CEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCCC
Q 015684 92 DLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQE 137 (402)
Q Consensus 92 D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~ 137 (402)
.-.|+.||.| +.|. .+.+.+.-.+.-.....-.++.+.||||..
T Consensus 73 ~~ylFLGDYV-DRG~-~slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 73 TNYLFMGDYV-DRGY-YSVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp SCEEECSCCC-CSSS-SHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ceEEecCccc-CCCC-cceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 4589999966 4443 344454444433233566799999999973
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=93.44 E-value=0.11 Score=44.79 Aligned_cols=58 Identities=9% Similarity=0.126 Sum_probs=35.3
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCc-ccccCCCeeEEecCCccCCC-CCCCCCCcceEEEEEe
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHVND-FCGRLTGIQLCYGGGFGYHA-YGKAGWERRARVVVAS 339 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~~~-~~~~~~gi~~~~~~~~g~~~-y~~~~~~~g~rv~ei~ 339 (402)
-+...++.++++.++++++-||.=..+ +....+|.-+-.-.++.|.+ +++ .+-++.++
T Consensus 222 fg~~~~~~Fl~~n~l~~IIR~He~~~~G~~~~~~~~viTiFSa~nY~~~~~N-----~gail~i~ 281 (294)
T d1jk7a_ 222 FGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDN-----AGAMMSVD 281 (294)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTGGGTCCC-----CEEEEEEC
T ss_pred cCHHHHHHHHHHCCCCEEEEcCccccCCcEEecCCcEEEEecCCCcCCCCCc-----cEEEEEEC
Confidence 466888999999999999999986632 22233432222223445543 333 24477776
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=92.84 E-value=1.8 Score=35.71 Aligned_cols=78 Identities=15% Similarity=0.170 Sum_probs=44.9
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++.|+=-..+ .+.++.....++ ++.||||..|.+.++... -..+...+++ +.
T Consensus 1 MkILfiGDIvG~~G------------------r~~v~~~Lp~lk-~~~DfVIaNgENaa~G~G-it~~~~~~l~----~~ 56 (255)
T d1t70a_ 1 MRVLFIGDVFGQPG------------------RRVLQNHLPTIR-PQFDFVIVNMENSAGGFG-MHRDAARGAL----EA 56 (255)
T ss_dssp CEEEEECCBBHHHH------------------HHHHHHHHHHHG-GGCSEEEEECTBTTTTSS-CCHHHHHHHH----HH
T ss_pred CeEEEEecCCCHHH------------------HHHHHHHhHHHH-hhCCEEEECCccCCCCcC-CCHHHHHHHH----Hc
Confidence 68999999864322 223333333333 457999999997776422 1222333333 46
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIV 150 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~ 150 (402)
++-++ +.|||=... .++.+++.
T Consensus 57 GvDvi-T~GNH~wdk----kei~~~i~ 78 (255)
T d1t70a_ 57 GAGCL-TLGNHAWHH----KDIYPMLS 78 (255)
T ss_dssp TCSEE-ECCTTTTSS----TTHHHHHH
T ss_pred CCcEE-EcCchhhcc----hhHHHHHh
Confidence 88754 779996532 34555554
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.02 E-value=0.2 Score=45.79 Aligned_cols=27 Identities=4% Similarity=0.162 Sum_probs=22.5
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCc
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHVND 303 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~~~ 303 (402)
.+...+..++++.++++++-||.=..+
T Consensus 247 FG~~a~~~FL~~n~L~~IIR~HE~~~~ 273 (473)
T d1auia_ 247 YSYPAVCEFLQHNNLLSILRAHEAQDA 273 (473)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred EChHHHHHHHHHcCCcEEEEcCcchhh
Confidence 355788999999999999999987643
|