Citrus Sinensis ID: 015744

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-
Protein Sequence
MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQPQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELKWRKDLKESKFLSSIGKDRGPGELSIGSGSFPAGRFKASNEDEHFQDQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHcccccEEEEEHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccHcccHHHcHccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccEEEccccccc
Coil and Loop (DISEMBL)
myhhhqnqgksmhsssrmpipterhlflqggsgpgdsglvlstdakprlkwtpdLHERFIEAVNQlggadkatpKTVMKlmgipgltlYHLKSHLQKYRlsknlhgqanignnkigpvtvpgermpeanathmnnlsigpqpnkslhISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKelqgfcpqqpqanqptdcsmdscltscegsqkdqeihnggvrlrpyhgtptlepkeiveepmlQQTELKWRKdlkeskflssigkdrgpgelsigsgsfpagrfkasnedehfqdqtnkkpegaklenenllpeyrlpcfstkldlnahdhendvasgckqfdlngfswn
Flexible Loop (DISEMBL)
myhhhqnqgksmhsssRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNqlggadkatpKTVMKLMGIPGLTLYHLKSHLQKYRLSKNlhgqanignnkigpvtVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQPQANQPTDCSMDSCLTSCEGSQKdqeihnggvrlrpyhgtptlepkeiveepmLQQTELKWRKDLKESKFlssigkdrgpgelsiGSGSFPAGRFKASNEDEHfqdqtnkkpegaklenenllpeYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN
Low Complexity Region (SEG)
MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQPQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELKWRKDLKESKFLSSIGKDRGPGELSIGSGSFPAGRFKASNEDEHFQDQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN
Disordered region (IsUnstruct)
***********************************************RLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGN***************************************IQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGF******************************************************************************************************************************LPEYRLPCFSTKLDLNAH*****VA*GCKQFD*******
Disordered Region (DISOPRED)
*************************************************KWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKY***********************************************************************************************************************************************************************************************************************************************************************************KLD****************FDLNGFSW*
Disordered Region (DISEMBL)
*****************MPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ***********DSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELKWRKDLKESKFLSSIGKDRGPGELSIGSGSFPAGRFKAS**********NKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN
Disordered Region (DISPRO)
**********************************************PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNL****************************************SLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLG***************************************************************************************LEPKEIVEEPMLQQTELKWRKDLKESKFLSSIG*************************************************EYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSW*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQPQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELKWRKDLKESKFLSSIGKDRGPGELSIGSGSFPAGRFKASNEDEHFQDQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	401	2.2.26 [Sep-21-2011]
Q9SAK5	358	Myb family transcription	no	no	0.381	0.427	0.569	4e-44
Q8GUN5	413	Protein PHR1-LIKE 1 OS=Ar	no	no	0.339	0.329	0.486	3e-32
Q700D9	255	Putative Myb family trans	no	no	0.139	0.219	0.607	4e-14
Q93WJ9	403	Transcription repressor K	no	no	0.139	0.138	0.571	7e-13
Q9C616	388	Probable transcription fa	no	no	0.139	0.144	0.571	1e-12
Q0J235	532	Probable transcription fa	no	no	0.142	0.107	0.561	2e-12
Q9FJV5	276	Probable transcription fa	no	no	0.159	0.231	0.538	3e-12
Q9ZWJ9	664	Two-component response re	no	no	0.162	0.097	0.5	5e-12
Q941I2	322	Probable transcription fa	no	no	0.139	0.173	0.553	6e-12
Q940D0	690	Two-component response re	no	no	0.134	0.078	0.545	1e-11

>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=2 SV=2

 Score =  179 bits (453), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 94/165 (56%), Positives = 119/165 (72%), Gaps = 12/165 (7%)

Query: 35  GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
           GDSGLVL+TD KPRL+WT +LHERF++AV QLGG DKATPKT+M++MG+ GLTLYHLKSH
Sbjct: 23  GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 82

Query: 95  LQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQM 154
           LQK+RL K  H +    + K G           A+A  +           S +++E   M
Sbjct: 83  LQKFRLGKQPHKEYGDHSTKEG---------SRASAMDIQRNVASSSGMMSRNMNE---M 130

Query: 155 QIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNL 199
           Q+EVQRRLHEQLEVQRHLQLRIEAQGKY+Q++LE+A +TL  +N+
Sbjct: 131 QMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENM 175

Transcription factor required for phloem identity. Has a dual role both in promoting phloem differentiation and in repressing xylem differentiation during vascular development.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1

 Score =  139 bits (351), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/148 (48%), Positives = 102/148 (68%), Gaps = 12/148 (8%)

Query: 45  AKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNL 104
           +K R++WTP+LHE F+EAVNQLGG+++ATPK V+KL+  PGLT+YH+KSHLQKYR ++  
Sbjct: 230 SKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYRTAR-- 287

Query: 105 HGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHE 164
                    K     V GE   E   T + ++        S+ I++ +++Q+EVQ+RLHE
Sbjct: 288 --------YKPETSEVTGEPQ-EKKMTSIEDIK-SLDMKTSVEITQALRLQMEVQKRLHE 337

Query: 165 QLEVQRHLQLRIEAQGKYLQAVLEKAQE 192
           QLE+QR LQL+IE QG+YLQ + EK Q+
Sbjct: 338 QLEIQRSLQLQIEKQGRYLQMMFEKQQK 365

Transcription factor acting as central integrator of phosphate starvation responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=2

 Score = 79.3 bits (194), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 44/56 (78%)

Query: 47  PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
           PRL+WTP+LH  F+ AV+ LGG  KATPK V+K+M + GLT+ H+KSHLQ YR S+
Sbjct: 24  PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSR 79

Putative transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1

 Score = 75.5 bits (184), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 42/56 (75%)

Query: 47  PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
           PR++WT  LH RF+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ YR  K
Sbjct: 220 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 275

Transcriptional repressor that regulates lateral organ polarity. Promotes lateral organ abaxial identity by repressing the adaxial regulator ASYMMETRIC LEAVES2 (AS2) in abaxial cells. Required for abaxial identity in both leaves and carpels. Functions with KAN2 in the specification of polarity of the ovule outer integument. Regulates cambium activity by repressing the auxin efflux carrier PIN1. Plays a role in lateral root formation and development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 42/56 (75%)

Query: 47  PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
           PR++WT  LH RF+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ YR  K
Sbjct: 214 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 269

Probable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV=2

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 43/57 (75%)

Query: 47  PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKN 103
           PR++WT  LH RF+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ YR  K+
Sbjct: 325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKS 381

Probable transcription factor that regulates abaxial identity during leaf development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 38  GLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQK 97
           GL  S  A PR++WT  LH  F+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ 
Sbjct: 98  GLKRSIRA-PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQM 156

Query: 98  YRLSK 102
           YR  K
Sbjct: 157 YRTVK 161

Probable transcritpion factor that regulates carpel integuments formation. Required for the specification of polarity in the ovule inner integument. Modulates the content of flavonols and proanthocyanidin in seeds.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1

 Score = 72.4 bits (176), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)

Query: 35  GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
           GD     S+  KPR+ W+ +LH++F+ AVNQLG  DKA PK ++++M +PGLT  ++ SH
Sbjct: 205 GDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLG-VDKAVPKKILEMMNVPGLTRENVASH 263

Query: 95  LQKYRL 100
           LQKYR+
Sbjct: 264 LQKYRI 269

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins. Involved in the expression of nuclear genes for components of mitochondrial complex I. Promotes cytokinin-mediated leaf longevity. Involved in the ethylene signaling pathway in an ETR1-dependent manner and in the cytokinin signaling pathway.

Arabidopsis thaliana (taxid: 3702)

>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 41/56 (73%)

Query: 47  PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
           PR++WT  LH  F+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ YR  K
Sbjct: 165 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIK 220

Probable transcription factor that regulates lateral organ polarity. Plays a role in lateral root formation and development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2

 Score = 71.2 bits (173), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 44/55 (80%), Gaps = 1/55 (1%)

Query: 46  KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
           KPR+ W+ +LH++F+ AVNQLG  +KA PK +++LM +PGLT  ++ SHLQKYR+
Sbjct: 237 KPRVVWSVELHQQFVAAVNQLG-VEKAVPKKILELMNVPGLTRENVASHLQKYRI 290

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	401
224125896	427	predicted protein [Populus trichocarpa]	0.997	0.936	0.752	1e-177
255568946	419	transcription factor, putative [Ricinus	0.997	0.954	0.719	1e-168
224144770	421	predicted protein [Populus trichocarpa]	0.997	0.950	0.720	1e-167
225441650	418	PREDICTED: uncharacterized protein LOC10	0.982	0.942	0.701	1e-158
225441648	412	PREDICTED: uncharacterized protein LOC10	0.967	0.941	0.687	1e-152
356543598	420	PREDICTED: uncharacterized protein LOC10	0.990	0.945	0.636	1e-143
356547128	400	PREDICTED: uncharacterized protein LOC10	0.925	0.927	0.642	1e-137
356542754	405	PREDICTED: uncharacterized protein LOC10	0.972	0.962	0.622	1e-131
186509740	394	myb family transcription factor [Arabido	0.952	0.969	0.607	1e-128
356542756	399	PREDICTED: uncharacterized protein LOC10	0.957	0.962	0.610	1e-126

>gi|224125896|ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|222858078|gb|EEE95625.1| predicted protein [Populus trichocarpa]

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 322/428 (75%), Positives = 349/428 (81%), Gaps = 28/428 (6%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MYHHHQ+QGKS+HSSSRM IP ERHLFLQGG+GPGDSGLVLSTDAKPRLKWTPDLHERFI
Sbjct: 1   MYHHHQHQGKSIHSSSRMAIPPERHLFLQGGNGPGDSGLVLSTDAKPRLKWTPDLHERFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
           EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIG++KIG V V
Sbjct: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGSSKIGTVAV 120

Query: 121 PGERMPEANATHMN--NLSIGPQPNK-----SLHISETIQMQIEVQRRLHEQLEVQRHLQ 173
            G+RMPEANATH+N  NLSIG QPNK     SLH SE +QMQIEVQRRLHEQLEVQRHLQ
Sbjct: 121 VGDRMPEANATHININNLSIGSQPNKILKSRSLHFSEALQMQIEVQRRLHEQLEVQRHLQ 180

Query: 174 LRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKEL 233
           LRIEAQGKYLQAVLEKAQETLGRQNLGT GLEAAKVQLSELVSKVSTQCLNSTFS+L +L
Sbjct: 181 LRIEAQGKYLQAVLEKAQETLGRQNLGTVGLEAAKVQLSELVSKVSTQCLNSTFSELNDL 240

Query: 234 QGFCPQQPQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPM 293
           QG CPQQ    QP DCSMDSCLTSCEGSQK+QEIHN G+ LRP +    LEPKEI EE  
Sbjct: 241 QGLCPQQTPPTQPNDCSMDSCLTSCEGSQKEQEIHNIGMGLRPCNSNALLEPKEIAEEHA 300

Query: 294 LQQTELKWRKDLKESK-FLSSIG---------KDRGPGELSIGSG----------SFPAG 333
           LQQTELKW + L+++K FL+SIG          +R   +LSIG G          SF  G
Sbjct: 301 LQQTELKWGEYLRDNKMFLTSIGHETERRTFSAERSCSDLSIGVGLQGEKGNINSSFAEG 360

Query: 334 RFKASNEDEHFQDQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQF 393
           RFK  +ED+ FQDQTNK+ E  K E+E + P YRL  F+TKLDLN+HD E D AS CKQ 
Sbjct: 361 RFKGMSEDDSFQDQTNKRAESVKYEDEKMSPGYRLSYFTTKLDLNSHD-EIDAASSCKQL 419

Query: 394 DLNGFSWN 401
           DLNGFSWN
Sbjct: 420 DLNGFSWN 427

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568946|ref|XP_002525443.1| transcription factor, putative [Ricinus communis] gi|223535256|gb|EEF36933.1| transcription factor, putative [Ricinus communis]

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 302/420 (71%), Positives = 335/420 (79%), Gaps = 20/420 (4%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MYHHHQ+QGKS+HSSSRM IP ERHLFLQGG+GPGDSGLVLSTDAKPRLKWT DLHE FI
Sbjct: 1   MYHHHQHQGKSVHSSSRMSIPPERHLFLQGGNGPGDSGLVLSTDAKPRLKWTSDLHEHFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
           EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQAN G+NKIG   V
Sbjct: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKIGTGAV 120

Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
            G+R+ E N TH+NNLS+G Q NK LHI E +QMQIEVQRRLHEQLEVQRHLQLRIEAQG
Sbjct: 121 VGDRISETNVTHINNLSMGTQTNKGLHIGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180

Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
           KYLQ+VLEKAQETLGRQNLG+ GLEAAKVQLSELVSKVSTQCLNS FS+LKELQG C QQ
Sbjct: 181 KYLQSVLEKAQETLGRQNLGSIGLEAAKVQLSELVSKVSTQCLNSAFSELKELQGLCHQQ 240

Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELK 300
            Q   PTDCSMDSCLTSCEGSQK+QEIHN G+ LRPY+G   LE K+I E  +L QTELK
Sbjct: 241 TQTAPPTDCSMDSCLTSCEGSQKEQEIHNTGMGLRPYNGNALLESKDITEGHVLHQTELK 300

Query: 301 WRKDLKESK-FLSSIGK---------DRGPGELSIGSG---------SFPAGRFKASNED 341
           W +DLK++K FLS +G          +R   +LS+  G         SF  GR+K  N+ 
Sbjct: 301 WSEDLKDNKMFLSPLGNNAARRNFAAERSTSDLSMTVGLQGENGNASSFSEGRYKDRNDG 360

Query: 342 EHFQDQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN 401
           + F DQTNK  +  KL   ++   YRLP F+TKLDLN+H+ E D AS CKQ DLNGFSWN
Sbjct: 361 DSFPDQTNKSLDSVKLPKGDVSQGYRLPYFATKLDLNSHE-EIDAASSCKQLDLNGFSWN 419

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144770|ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|222862283|gb|EEE99789.1| predicted protein [Populus trichocarpa]

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/422 (72%), Positives = 336/422 (79%), Gaps = 22/422 (5%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MY HHQ+QGK++HSSSR  IP ERHLFLQ G+GPGDSGLVLSTDAKPRLKWT DLHERFI
Sbjct: 1   MYQHHQHQGKNIHSSSRNSIPPERHLFLQVGNGPGDSGLVLSTDAKPRLKWTTDLHERFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
           EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQAN G+NK G V V
Sbjct: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKSGTVAV 120

Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
            G+RMPE NATH+NNLSIG Q NKSLH SE +Q+QIEVQRRLHEQLEVQRHLQLRIEAQG
Sbjct: 121 VGDRMPEVNATHINNLSIGSQTNKSLHFSEALQVQIEVQRRLHEQLEVQRHLQLRIEAQG 180

Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
           KYLQ+VLEKAQETLGRQNLGT GLEAAKVQLSELVSKVS++CLNS FS+LK+LQG CP  
Sbjct: 181 KYLQSVLEKAQETLGRQNLGTVGLEAAKVQLSELVSKVSSKCLNSAFSELKDLQGLCPPL 240

Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELK 300
            Q   P DCSMDSCLTS EGSQK+QEIHN G+ LRPY+G   LEPK I  E  LQQTELK
Sbjct: 241 TQPTHPNDCSMDSCLTSIEGSQKEQEIHNTGMGLRPYNGNALLEPKVIAGEHALQQTELK 300

Query: 301 W-RKDLKESK-FLSSIGKD---------RGPGELSIGSG----------SFPAGRFKASN 339
           W  +D +++K FLSS+  D         R    LSIG G          SF   RFK  +
Sbjct: 301 WPGEDQRDNKMFLSSMRNDTERRTFSAERSCSNLSIGVGLQGERGNVSSSFAEARFKGRS 360

Query: 340 EDEHFQDQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFS 399
           ED+ FQD+TN++ +  KLENE L P YRL  ++TKLDLN+H  E D ASGC+Q DLNGFS
Sbjct: 361 EDDSFQDKTNRRIDAIKLENEKLSPGYRLSYYATKLDLNSHG-EIDAASGCRQLDLNGFS 419

Query: 400 WN 401
           WN
Sbjct: 420 WN 421

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441650|ref|XP_002282324.1| PREDICTED: uncharacterized protein LOC100248614 isoform 1 [Vitis vinifera]

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/425 (70%), Positives = 331/425 (77%), Gaps = 31/425 (7%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MYHHH +QGK++H SSR PI  ER+LFLQGG+GPGDSGLVLSTDAKPRLKWTPDLHERFI
Sbjct: 1   MYHHHHHQGKNIHPSSRTPITPERNLFLQGGNGPGDSGLVLSTDAKPRLKWTPDLHERFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
           EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQAN   +K    TV
Sbjct: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSATSK----TV 116

Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
            GERMPEAN   M++ +IG Q NKSLH+SET+QM IE QRRLHEQLEVQRHLQLRIEAQG
Sbjct: 117 VGERMPEANGALMSSPNIGNQTNKSLHLSETLQM-IEAQRRLHEQLEVQRHLQLRIEAQG 175

Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
           KYLQAVLEKAQETLGRQNLG  GLEAAKVQLSELVSKVSTQCL+S FS+LKELQ  CPQQ
Sbjct: 176 KYLQAVLEKAQETLGRQNLGAVGLEAAKVQLSELVSKVSTQCLHSAFSELKELQSLCPQQ 235

Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPY-HGTPTLEPKEIVEEPMLQQTEL 299
            Q  QPTDCSMDSCLTSCEGSQ++QEIHN G+ LRPY +G+  LE K+  E P LQ T L
Sbjct: 236 TQT-QPTDCSMDSCLTSCEGSQREQEIHNCGMGLRPYTNGSTPLEAKDTAEPPGLQHTVL 294

Query: 300 KWRKDLKESK-FLSSIGKD---------RGPGELSI----------GSGSFPAGRFKASN 339
           KW +D KE++ F+SS+ +D         R   +LS+          GS S+  GRFK   
Sbjct: 295 KWCEDTKENRQFISSMQRDAERRTMTAERSNSDLSMRIGLQGEKGNGSNSYSEGRFKGRA 354

Query: 340 EDEHFQDQTNKKPE---GAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLN 396
           E ++F D+TN   +     K ENE +   YRLPCF  KLDLNAHD ENDV   CKQFDLN
Sbjct: 355 EADNFVDRTNHGADSGNSVKQENEKMSHGYRLPCFGAKLDLNAHD-ENDVTLSCKQFDLN 413

Query: 397 GFSWN 401
           GFSWN
Sbjct: 414 GFSWN 418

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441648|ref|XP_002282336.1| PREDICTED: uncharacterized protein LOC100248614 isoform 2 [Vitis vinifera]

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 292/425 (68%), Positives = 325/425 (76%), Gaps = 37/425 (8%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MYHHH +QGK++H SSR PI  ER+LFLQGG+GPGDSGLVLSTDAKPRLKWTPDLHERFI
Sbjct: 1   MYHHHHHQGKNIHPSSRTPITPERNLFLQGGNGPGDSGLVLSTDAKPRLKWTPDLHERFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
           EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQAN   +K    TV
Sbjct: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSATSK----TV 116

Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
            GERMPEAN   M++ +IG Q NKSLH+SET+QM IE QRRLHEQLE      LRIEAQG
Sbjct: 117 VGERMPEANGALMSSPNIGNQTNKSLHLSETLQM-IEAQRRLHEQLE------LRIEAQG 169

Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
           KYLQAVLEKAQETLGRQNLG  GLEAAKVQLSELVSKVSTQCL+S FS+LKELQ  CPQQ
Sbjct: 170 KYLQAVLEKAQETLGRQNLGAVGLEAAKVQLSELVSKVSTQCLHSAFSELKELQSLCPQQ 229

Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPY-HGTPTLEPKEIVEEPMLQQTEL 299
            Q  QPTDCSMDSCLTSCEGSQ++QEIHN G+ LRPY +G+  LE K+  E P LQ T L
Sbjct: 230 TQT-QPTDCSMDSCLTSCEGSQREQEIHNCGMGLRPYTNGSTPLEAKDTAEPPGLQHTVL 288

Query: 300 KWRKDLKESK-FLSSIGKD---------RGPGELSI----------GSGSFPAGRFKASN 339
           KW +D KE++ F+SS+ +D         R   +LS+          GS S+  GRFK   
Sbjct: 289 KWCEDTKENRQFISSMQRDAERRTMTAERSNSDLSMRIGLQGEKGNGSNSYSEGRFKGRA 348

Query: 340 EDEHFQDQTNKKPE---GAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLN 396
           E ++F D+TN   +     K ENE +   YRLPCF  KLDLNAHD ENDV   CKQFDLN
Sbjct: 349 EADNFVDRTNHGADSGNSVKQENEKMSHGYRLPCFGAKLDLNAHD-ENDVTLSCKQFDLN 407

Query: 397 GFSWN 401
           GFSWN
Sbjct: 408 GFSWN 412

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543598|ref|XP_003540247.1| PREDICTED: uncharacterized protein LOC100810396 [Glycine max]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 270/424 (63%), Positives = 311/424 (73%), Gaps = 27/424 (6%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MYHHHQ+QGK++HSSSRMPIP+ERH+FLQ G+G GDSGLVLSTDAKPRLKWTPDLH RFI
Sbjct: 1   MYHHHQHQGKNIHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
           EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQ+N    KI     
Sbjct: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTYKITTSAS 120

Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
            GER+ E N THMN LS+GPQ NK LHISE +QMQIEVQRRL+EQLEVQRHLQLRIEAQG
Sbjct: 121 TGERLSETNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQG 180

Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
           KYLQ+VLEKAQETLGRQNLG  G+EAAKVQLSELVSKVS+QCLNS F++ K+LQGF PQQ
Sbjct: 181 KYLQSVLEKAQETLGRQNLGVVGIEAAKVQLSELVSKVSSQCLNSAFTEPKDLQGFFPQQ 240

Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEP-MLQQTEL 299
            Q N P DCSMDSCLTS + SQK+QEI NG   LR ++    +E KE  E P  L+  EL
Sbjct: 241 TQTNPPNDCSMDSCLTSSDRSQKEQEIQNG---LRHFNSHVFMEHKEATEAPNNLRNPEL 297

Query: 300 KWRKDLKESKFLSSIGKDR---------GPGELSIGSG----------SFPAGRFKASNE 340
           KW +D K++ FL+ + K+           P  LS+  G           +P      S  
Sbjct: 298 KWCEDGKKNTFLAPLSKNEERRNYAAESSPNNLSMSIGLERETENGINLYPERLITESQS 357

Query: 341 DEHFQDQTNKKPEGAKLENENLLPEYRLPC---FSTKLDLNAHDHENDVASGCKQFDLNG 397
           D  FQ +   KPE  K  +E +  +YRLP     + +LDLN H  +N+ A+ CKQ DLN 
Sbjct: 358 DGEFQHRNRIKPETLKPVDEKVSQDYRLPASYFAAARLDLNTHG-DNEAATTCKQLDLNR 416

Query: 398 FSWN 401
           FSW+
Sbjct: 417 FSWS 420

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547128|ref|XP_003541969.1| PREDICTED: uncharacterized protein LOC100799064 [Glycine max]

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/403 (64%), Positives = 296/403 (73%), Gaps = 32/403 (7%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MYHHHQ+QGK++HSSSRMPIP+ERH+FLQ G+G GDSGLVLSTDAKPRLKWTPDLH RFI
Sbjct: 1   MYHHHQHQGKNIHSSSRMPIPSERHMFLQAGNGSGDSGLVLSTDAKPRLKWTPDLHARFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
           EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQ+N   +KI     
Sbjct: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKITTSAT 120

Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
            GER+ E N THMN LS+GPQ NK LHISE +QMQIEVQRRL+EQLEVQRHLQLRIEAQG
Sbjct: 121 TGERLSETNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQG 180

Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
           KYLQ+VLEKAQETLGRQNLG  GLEAAKVQLSELVSKVS+QC NS F++LK+LQGFCPQQ
Sbjct: 181 KYLQSVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCFNSAFTELKDLQGFCPQQ 240

Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEP-MLQQTEL 299
           PQ N P DCSMDSC+TSC+ SQK+QEI NG   LR +     +E KE  E P  L+  E+
Sbjct: 241 PQTNPPNDCSMDSCITSCDRSQKEQEIQNG---LRHFSSHMFMEQKEAKEAPNNLRNPEI 297

Query: 300 KWRKDLKESKFLSSIGKDR---------GPGELSI----------GSGSFPAGRFKASNE 340
           KW  D K++ FL+ + K+           P  LS+          GS  +P      S  
Sbjct: 298 KWYDDGKKNTFLAPLSKNEERRNYAAECSPSNLSMSIGLERETENGSSMYPERLITESPS 357

Query: 341 DEHFQDQTNKKPEGAKLENENLLPEYRLPC---FSTKLDLNAH 380
           D         KP+  K  +E +  +YRLP     + +LDLN H
Sbjct: 358 DGRI------KPQTMKPVDEKVSQDYRLPTSYFAAARLDLNTH 394

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542754|ref|XP_003539830.1| PREDICTED: uncharacterized protein LOC100805237 isoform 1 [Glycine max]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/416 (62%), Positives = 303/416 (72%), Gaps = 26/416 (6%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MY H Q+QGK++HSSSRMPIP+ER +FLQ G+G GDSGLVLSTDAKPRLKWTPDLH RFI
Sbjct: 1   MYTHQQHQGKNIHSSSRMPIPSERQMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKI----G 116
           EAV QLGGADKATPKTVMKL+GIPGLTLYHLKSHLQKYRLSK+LHGQ+N   +KI    G
Sbjct: 61  EAVQQLGGADKATPKTVMKLIGIPGLTLYHLKSHLQKYRLSKSLHGQSNNMTHKITINSG 120

Query: 117 PVTVPGERMPEANATHMNNLSIGPQP-NKSLHISETIQMQIEVQRRLHEQLEVQRHLQLR 175
             T   ER+ E N THMN+L++ PQ  NK L+ISE + MQIE QRRL+EQLEVQR LQLR
Sbjct: 121 AAT--DERLRENNGTHMNSLNLAPQSNNKDLYISEALHMQIEEQRRLNEQLEVQRLLQLR 178

Query: 176 IEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSD-LKELQ 234
           IEAQGKYLQAVLEKAQETLGRQNLG  GLEA K+QLSELVSKVS+QCLNS FSD LKE+Q
Sbjct: 179 IEAQGKYLQAVLEKAQETLGRQNLGAVGLEATKLQLSELVSKVSSQCLNSAFSDRLKEIQ 238

Query: 235 GFCP-QQPQANQP--TDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEE 291
           GF P QQ Q NQP   DCSMDSCLTSCEGSQK+QEI NGG+ LRP++    +E KE++E 
Sbjct: 239 GFSPHQQTQTNQPNTNDCSMDSCLTSCEGSQKEQEIQNGGMSLRPFNVHTFMERKEVIEG 298

Query: 292 PMLQ---QTELKWRKDLKESKFLSSI---GKDRGPGELSIGSGSFPAGRFKASNEDEHFQ 345
           P L     T+L W   +K++ FL+ +      R P  LS+  G       +   E+    
Sbjct: 299 PNLNNLPNTDLNWCDPVKKNTFLTPLSMHADKRSPSNLSMSIG------LEGETENGSTI 352

Query: 346 DQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN 401
              + KP   K+  +  LP       ++KLDL   D++ D  + CKQ DLNGFSWN
Sbjct: 353 RTESVKPVADKVSQDYGLPSNYFA--ASKLDLTTEDNK-DTKTSCKQLDLNGFSWN 405

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186509740|ref|NP_001118567.1| myb family transcription factor [Arabidopsis thaliana] gi|6223653|gb|AAF05867.1|AC011698_18 transfactor-like [Arabidopsis thaliana] gi|332640508|gb|AEE74029.1| myb family transcription factor [Arabidopsis thaliana]

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/413 (60%), Positives = 300/413 (72%), Gaps = 31/413 (7%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MY+ +Q+QGK++ SSSRM I +ERH FL+G S PGDSGL+LSTDAKPRLKWTPDLHERFI
Sbjct: 1   MYYQNQHQGKNILSSSRMHITSERHPFLRGNS-PGDSGLILSTDAKPRLKWTPDLHERFI 59

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
           EAVNQLGGADKATPKT+MK+MGIPGLTLYHLKSHLQKYRLSKNL+GQAN   NKIG +T+
Sbjct: 60  EAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANNSFNKIGIMTM 119

Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
             E+ P+A+     NLSIGPQPNK+  I E +QMQIEVQRRLHEQLEVQRHLQLRIEAQG
Sbjct: 120 MEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQG 179

Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
           KYLQ+VLEKAQETLGRQNLG AG+EAAKVQLSELVSKVS +  NS+F + KELQ  C QQ
Sbjct: 180 KYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQ 239

Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQE-IHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTEL 299
            Q N P DCS++SCLTS EG+QK+ + + N  + LR Y G  T E KEI+EEP+ Q+ EL
Sbjct: 240 MQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEPLFQRMEL 299

Query: 300 KWRKDLKESKFLSSI---------GKDRGPGELSIGSG--SFPAGRFKASNEDEHFQDQT 348
            W + L+ + +LS++           +R PG LSIG G     +   + +NED   + + 
Sbjct: 300 TWTEGLRGNPYLSTMVSEAEQRISYSERSPGRLSIGVGLHGHKSQHQQGNNEDHKLETRN 359

Query: 349 NKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN 401
            K  +                  +T+LDLN H  EN   +  KQFDLNGFSWN
Sbjct: 360 RKGMDS-----------------TTELDLNTHV-ENYCTTRTKQFDLNGFSWN 394

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542756|ref|XP_003539831.1| PREDICTED: uncharacterized protein LOC100805237 isoform 2 [Glycine max]

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/416 (61%), Positives = 298/416 (71%), Gaps = 32/416 (7%)

Query: 1   MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
           MY H Q+QGK++HSSSRMPIP+ER +FLQ G+G GDSGLVLSTDAKPRLKWTPDLH RFI
Sbjct: 1   MYTHQQHQGKNIHSSSRMPIPSERQMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFI 60

Query: 61  EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKI----G 116
           EAV QLGGADKATPKTVMKL+GIPGLTLYHLKSHLQKYRLSK+LHGQ+N   +KI    G
Sbjct: 61  EAVQQLGGADKATPKTVMKLIGIPGLTLYHLKSHLQKYRLSKSLHGQSNNMTHKITINSG 120

Query: 117 PVTVPGERMPEANATHMNNLSIGPQP-NKSLHISETIQMQIEVQRRLHEQLEVQRHLQLR 175
             T   ER+ E N THMN+L++ PQ  NK L+ISE + MQIE QRRL+EQLE      LR
Sbjct: 121 AAT--DERLRENNGTHMNSLNLAPQSNNKDLYISEALHMQIEEQRRLNEQLE------LR 172

Query: 176 IEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSD-LKELQ 234
           IEAQGKYLQAVLEKAQETLGRQNLG  GLEA K+QLSELVSKVS+QCLNS FSD LKE+Q
Sbjct: 173 IEAQGKYLQAVLEKAQETLGRQNLGAVGLEATKLQLSELVSKVSSQCLNSAFSDRLKEIQ 232

Query: 235 GFCP-QQPQANQP--TDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEE 291
           GF P QQ Q NQP   DCSMDSCLTSCEGSQK+QEI NGG+ LRP++    +E KE++E 
Sbjct: 233 GFSPHQQTQTNQPNTNDCSMDSCLTSCEGSQKEQEIQNGGMSLRPFNVHTFMERKEVIEG 292

Query: 292 PMLQ---QTELKWRKDLKESKFLSSI---GKDRGPGELSIGSGSFPAGRFKASNEDEHFQ 345
           P L     T+L W   +K++ FL+ +      R P  LS+  G       +   E+    
Sbjct: 293 PNLNNLPNTDLNWCDPVKKNTFLTPLSMHADKRSPSNLSMSIG------LEGETENGSTI 346

Query: 346 DQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN 401
              + KP   K+  +  LP       ++KLDL   D++ D  + CKQ DLNGFSWN
Sbjct: 347 RTESVKPVADKVSQDYGLPSNYFA--ASKLDLTTEDNK-DTKTSCKQLDLNGFSWN 399

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	401
TAIR|locus:2095933	394	MYR2 [Arabidopsis thaliana (ta	0.957	0.974	0.620	2e-120
TAIR|locus:2172394	402	MYR1 "myb-related protein 1" [	0.967	0.965	0.592	3.4e-116
TAIR|locus:2026739	337	AT1G69580 [Arabidopsis thalian	0.571	0.679	0.485	1.9e-51
TAIR|locus:2119425	295	UNE16 "unfertilized embryo sac	0.603	0.820	0.474	1.5e-49
TAIR|locus:2093726	298	AT3G24120 [Arabidopsis thalian	0.563	0.758	0.473	3.7e-48
TAIR|locus:2206415	358	APL "ALTERED PHLOEM DEVELOPMEN	0.401	0.449	0.566	1e-43
TAIR|locus:2157146	264	AT5G45580 [Arabidopsis thalian	0.423	0.643	0.468	4e-35
TAIR|locus:2045761	286	AT2G01060 [Arabidopsis thalian	0.364	0.510	0.496	2e-33
TAIR|locus:2087740	235	AT3G12730 [Arabidopsis thalian	0.369	0.629	0.496	3.2e-33
TAIR|locus:2139865	409	PHR1 "phosphate starvation res	0.453	0.444	0.395	1.8e-32

TAIR|locus:2095933 MYR2 [Arabidopsis thaliana (taxid:3702)]

 Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
 Identities = 255/411 (62%), Positives = 302/411 (73%)

Query:     1 MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
             MY+ +Q+QGK++ SSSRM I +ERH FL+G S PGDSGL+LSTDAKPRLKWTPDLHERFI
Sbjct:     1 MYYQNQHQGKNILSSSRMHITSERHPFLRGNS-PGDSGLILSTDAKPRLKWTPDLHERFI 59

Query:    61 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
             EAVNQLGGADKATPKT+MK+MGIPGLTLYHLKSHLQKYRLSKNL+GQAN   NKIG +T+
Sbjct:    60 EAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANNSFNKIGIMTM 119

Query:   121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
               E+ P+A+     NLSIGPQPNK+  I E +QMQIEVQRRLHEQLEVQRHLQLRIEAQG
Sbjct:   120 MEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQG 179

Query:   181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
             KYLQ+VLEKAQETLGRQNLG AG+EAAKVQLSELVSKVS +  NS+F + KELQ  C QQ
Sbjct:   180 KYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQ 239

Query:   241 PQANQPTDCSMDSCLTSCEGSQKDQE-IHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTEL 299
              Q N P DCS++SCLTS EG+QK+ + + N  + LR Y G  T E KEI+EEP+ Q+ EL
Sbjct:   240 MQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEPLFQRMEL 299

Query:   300 KWRKDLKESKFLSSIGKD---------RGPGELSIGSGSFPAGRFKASNEDEHFQDQTNK 350
              W + L+ + +LS++  +         R PG LSIG G          ++ +H   Q N 
Sbjct:   300 TWTEGLRGNPYLSTMVSEAEQRISYSERSPGRLSIGVGLH-------GHKSQH--QQGNN 350

Query:   351 KPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN 401
               E  KLE  N     +    +T+LDLN H  EN   +  KQFDLNGFSWN
Sbjct:   351 --EDHKLETRNR----KGMDSTTELDLNTHV-ENYCTTRTKQFDLNGFSWN 394

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2172394 MYR1 "myb-related protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
 Identities = 246/415 (59%), Positives = 298/415 (71%)

Query:     1 MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
             MY+H+Q+QGKS+ SSSRMPI +ERH FL+G +G GDSGL+LSTDAKPRLKWTPDLHERF+
Sbjct:     1 MYYHNQHQGKSILSSSRMPISSERHPFLRG-NGTGDSGLILSTDAKPRLKWTPDLHERFV 59

Query:    61 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
             EAVNQLGG DKATPKT+MK+MGIPGLTLYHLKSHLQKYRLSKNL+GQAN   NK   +T+
Sbjct:    60 EAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTSVMTM 119

Query:   121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
               E  PE + +H  +LSIGPQP+ +L IS+ +QMQIEVQRRLHEQLEVQRHLQLRIEAQG
Sbjct:   120 VEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQLEVQRHLQLRIEAQG 179

Query:   181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
             KYLQ++LEKAQETLGRQNLG AG+EA K QLSELVSKVS    +S+F + KELQ    QQ
Sbjct:   180 KYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQ 239

Query:   241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELK 300
              Q   P + S+DSCLTS EG+QK  ++ +  + LR Y G  T E KEI+EEP   + EL 
Sbjct:   240 MQKTYPPNSSLDSCLTSSEGTQKAPKMLDNRLGLRTYIGDSTSEQKEIMEEPFFHRMELT 299

Query:   301 WRKD--LKESK---FLSSIGKD---------RGPGELSIGSGSFPAGRFKASNEDEHFQD 346
             W ++  L+E+    +LS++  +         R PG LSIG G     R ++SN  E+ ++
Sbjct:   300 WAEEESLRENHNRPYLSTMVNNAEPRISSSRRSPGRLSIGVG-LHEHRGRSSNNSEYTEE 358

Query:   347 QTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN 401
             + N+  E  KLE              T LDLN HD EN   +  KQFDLNGFSWN
Sbjct:   359 RFNENNEDCKLETHT----------RTALDLNTHD-ENYGTTRPKQFDLNGFSWN 402

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2026739 AT1G69580 [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 118/243 (48%), Positives = 162/243 (66%)

Query:    39 LVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKY 98
             LVLSTDAKPRLKWT DLH +FIEAVNQLGG +KATPK +MK+M IPGLTLYHLKSHLQKY
Sbjct:    27 LVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKY 86

Query:    99 RLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSI-----GPQPNKSLHISETIQ 153
             RL K++    N    ++   +   E   + ++  +   S+      P  ++ L I+E +Q
Sbjct:    87 RLGKSMKFDDN--KLEVSSASENQEVESKNDSRDLRGCSVTEENSNPAKDRGLQITEALQ 144

Query:   154 MQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSE 213
             MQ+EVQ++LHEQ+EVQRHLQ++IEAQGKYLQ+VL KAQ+TL   +    G++ A+ +LS 
Sbjct:   145 MQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDFARTELSR 204

Query:   214 LVSKVSTQCLNSTFSDL----KELQGFCPQQPQANQPTD---CSMDSCLTSCEGSQKDQE 266
             L S V+  C +++FS+L    +E +GF   +   N+      CS++S LTS E S+   +
Sbjct:   205 LASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSSETSETKLD 264

Query:   267 IHN 269
               N
Sbjct:   265 TDN 267

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA

TAIR|locus:2119425 UNE16 "unfertilized embryo sac 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 122/257 (47%), Positives = 166/257 (64%)

Query:    12 MHSSSRMPIPTERHL--FLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGA 69
             M+S+ R  +P +  L  +  G + P D+ LVL+TD KPRL+WT +LHERF++AV QLGG 
Sbjct:     1 MYSAIRSSLPLDGSLGDYSDGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQLGGP 60

Query:    70 DKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEAN 129
             DKATPKT+M+ MG+ GLTLYHLKSHLQK+RL +    + +I N+K   V+   E   +  
Sbjct:    61 DKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQ-SCKESIDNSK--DVSCVAESQ-DTG 116

Query:   130 ATHMNNLSIGPQP-NKSLHISETIQMQIEVQRRLHEQLE---VQRHLQLRIEAQGKYLQA 185
             ++  ++L +  Q  N+S  ++E ++ Q+EVQRRLHEQLE   VQR LQLRIEAQGKYLQ+
Sbjct:   117 SSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEYTQVQRRLQLRIEAQGKYLQS 176

Query:   186 VLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVST----QCLNSTFSDLKELQGFCPQQP 241
             +LEKA + +  Q +  AGLEAA+ +LSEL  K S     Q   STF   K +     +  
Sbjct:   177 ILEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELA 236

Query:   242 QA-NQPTDCSMDSCLTS 257
              A     +CS +S LTS
Sbjct:   237 VAIEHKNNCSAESSLTS 253

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

TAIR|locus:2093726 AT3G24120 [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 115/243 (47%), Positives = 157/243 (64%)

Query:    28 LQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLT 87
             L G + PGD+ LVL+TD KPRL+WT +LHERF++AV QLGG DKATPKT+M+ MG+ GLT
Sbjct:    23 LDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLT 82

Query:    88 LYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLH 147
             LYHLKSHLQK+RL +   G+ +  N+K    +  GE     +++  +      + N+   
Sbjct:    83 LYHLKSHLQKFRLGRQA-GKESTENSK--DASCVGESQDTGSSSTSSMRMAQQEQNEGYQ 139

Query:   148 ISETIQMQIEVQRRLHEQLE---VQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGL 204
             ++E ++ Q+EVQRRLH+QLE   VQR LQLRIEAQGKYLQ++LEKA +    Q    AGL
Sbjct:   140 VTEALRAQMEVQRRLHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGL 199

Query:   205 EAAKVQLSELVSKVS--TQCLNSTFSDLKELQGFCPQQPQA--------NQPTDCSMDSC 254
             EAA+ +LSEL  KVS  +Q  +  + D  ++    P   +         N  T+CS++S 
Sbjct:   200 EAAREELSELAIKVSNSSQGTSVPYFDATKMM-MMPSLSELAVAIDNKNNITTNCSVESS 258

Query:   255 LTS 257
             LTS
Sbjct:   259 LTS 261

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0010048 "vernalization response" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2206415 APL "ALTERED PHLOEM DEVELOPMENT" [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 98/173 (56%), Positives = 125/173 (72%)

Query:    35 GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
             GDSGLVL+TD KPRL+WT +LHERF++AV QLGG DKATPKT+M++MG+ GLTLYHLKSH
Sbjct:    23 GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 82

Query:    95 LQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQM 154
             LQK+RL K  H +   G++     T  G R   A     N  S     +++++     +M
Sbjct:    83 LQKFRLGKQPHKE--YGDHS----TKEGSRA-SAMDIQRNVASSSGMMSRNMN-----EM 130

Query:   155 QIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAA 207
             Q+EVQRRLHEQLEVQRHLQLRIEAQGKY+Q++LE+A +TL  +N+  A   AA
Sbjct:   131 QMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAATAAAA 183

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005739 "mitochondrion" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010088 "phloem development" evidence=IMP

GO:0010089 "xylem development" evidence=IMP

TAIR|locus:2157146 AT5G45580 [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 83/177 (46%), Positives = 118/177 (66%)

Query:    40 VLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR 99
             +++ D KPRL+WT DLH+RF++AV +LGGADKATPK+V+KLMG+ GLTLYHLKSHLQKYR
Sbjct:     1 MMTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYR 60

Query:   100 LSKNLHGQAN-IGNNK--IGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQI 156
             L +    + N    NK   G   V  +   +   ++ +      + + ++  +E ++ Q+
Sbjct:    61 LGQQQGKKQNRTEQNKENAGSSYVHFDNCSQGGISNDSRFDNHQRQSGNVPFAEAMRHQV 120

Query:   157 EVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSE 213
             + Q+R  EQLEVQ+ LQ+R+EAQGKYL  +LEKAQ++L     G AG E  K Q S+
Sbjct:   121 DAQQRFQEQLEVQKKLQMRMEAQGKYLLTLLEKAQKSLP---CGNAG-ETDKGQFSD 173

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2045761 AT2G01060 [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 80/161 (49%), Positives = 112/161 (69%)

Query:    36 DSGLVLSTDA-KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
             D+G   S+ A K RL+WT +LHERF++AV QLGG D+ATPK V+++MG+ GLT+YH+KSH
Sbjct:     4 DNGGPNSSHASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSH 63

Query:    95 LQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQM 154
             LQKYRL+K L   ++            G++  +  +  M  LS G   +  + I+E +++
Sbjct:    64 LQKYRLAKYLPDSSS-----------EGKKTDKKESGDM--LS-GLDGSSGMQITEALKL 109

Query:   155 QIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLG 195
             Q+EVQ+RLHEQLEVQR LQLRIEAQGKYL+ ++E+ Q   G
Sbjct:   110 QMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSG 150

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

TAIR|locus:2087740 AT3G12730 [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 79/159 (49%), Positives = 109/159 (68%)

Query:    37 SGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQ 96
             SGLVL+TD KPRL+WT +LHERF++AV  LGG +KATPKT+M++MG+ GLTLYHLKSHLQ
Sbjct:    14 SGLVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQ 73

Query:    97 KYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKS-LHISETI-QM 154
             K+RL K  H + +  N+ I         + + N   M +L        S L I   + +M
Sbjct:    74 KFRLGKQPHKEHS-QNHSIC--------IRDTNRASMLDLRRNAVFTTSPLIIGRNMNEM 124

Query:   155 QIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQET 193
             Q+EVQRR+ E++ ++R +  RI AQGKY++++LEKA ET
Sbjct:   125 QMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACET 163

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2139865 PHR1 "phosphate starvation response 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 78/197 (39%), Positives = 121/197 (61%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
             K R++WTP+LHE F+EAVN LGG+++ATPK V+K+M + GLT+YH+KSHLQKYR ++   
Sbjct:   225 KARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTARYRP 284

Query:   106 GQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQ 165
               +  G+        P  ++      H+ +L +       + I+E +++Q+EVQ++LHEQ
Sbjct:   285 EPSETGS--------PERKLTPLE--HITSLDL----KGGIGITEALRLQMEVQKQLHEQ 330

Query:   166 LEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNS 225
             LE+QR+LQLRIE QGKYLQ + EK    L +    T+   AAK +  +  +  S +    
Sbjct:   331 LEIQRNLQLRIEEQGKYLQMMFEKQNSGLTKGTASTSD-SAAKSEQEDKKTADSKEVPEE 389

Query:   226 TFSDLKELQGFCPQQPQ 242
                  +EL+   P++P+
Sbjct:   390 ETRKCEELESPQPKRPK 406

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0016036 "cellular response to phosphate starvation" evidence=IMP

GO:0055063 "sulfate ion homeostasis" evidence=IMP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0071486 "cellular response to high light intensity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.24	0.691
3rd Layer	3.4.24.57	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	401
pfam14379	51	pfam14379, Myb_CC_LHEQLE, MYB-CC type transfactor,	2e-22
TIGR01557	57	TIGR01557, myb_SHAQKYF, myb-like DNA-binding domai	6e-21
PLN03162	526	PLN03162, PLN03162, golden-2 like transcription fa	2e-10
pfam00249	47	pfam00249, Myb_DNA-binding, Myb-like DNA-binding d	6e-08

>gnl|CDD|206547 pfam14379, Myb_CC_LHEQLE, MYB-CC type transfactor, LHEQLE motif

 Score = 88.8 bits (221), Expect = 2e-22
 Identities = 37/51 (72%), Positives = 46/51 (90%)

Query: 145 SLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLG 195
            + I+E +++Q+EVQRRLHEQLEVQRHLQ+RIEAQGKYLQ +LEKAQ+TL 
Sbjct: 1   GMQITEALRLQMEVQRRLHEQLEVQRHLQIRIEAQGKYLQEILEKAQKTLS 51

This family is found towards the C-terminus of Myb-CC type transcription factors, and carries a highly conserved LHEQLE sequence motif. Length = 51

>gnl|CDD|130620 TIGR01557, myb_SHAQKYF, myb-like DNA-binding domain, SHAQKYF class

 Score = 85.1 bits (211), Expect = 6e-21
 Identities = 33/57 (57%), Positives = 44/57 (77%)

Query: 46  KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
           KPR+ WT DLH+RF++AV +LGG D ATPK +++LM + GLT   + SHLQKYRL +
Sbjct: 1   KPRVVWTEDLHDRFLQAVQKLGGPDWATPKRILELMVVDGLTRDQVASHLQKYRLKQ 57

This model describes a DNA-binding domain restricted to (but common in) plant proteins, many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif. Length = 57

>gnl|CDD|178707 PLN03162, PLN03162, golden-2 like transcription factor; Provisional

 Score = 62.1 bits (150), Expect = 2e-10
 Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)

Query: 46  KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR 99
           K ++ WTP+LH RF+ AV QLG  +KA P  +++LMG+  LT +++ SHLQKYR
Sbjct: 235 KAKVDWTPELHRRFVHAVEQLG-VEKAFPSRILELMGVQCLTRHNIASHLQKYR 287

Length = 526

>gnl|CDD|215818 pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 48 RLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR 99
          R  WTP+  E  IEAV + G  +      + K +  PG T    K+    Y 
Sbjct: 1  RGPWTPEEDELLIEAVKKHGNGN---WSKIAKHL--PGRTDNQCKNRWNNYL 47

This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family. Length = 47

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	401
PF14379	51	Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE mot	99.92
PLN03162	526	golden-2 like transcription factor; Provisional	99.88
TIGR01557	57	myb_SHAQKYF myb-like DNA-binding domain, SHAQKYF c	99.84
PF00249	48	Myb_DNA-binding: Myb-like DNA-binding domain; Inte	97.11
smart00426	68	TEA TEA domain.	89.01

>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif

Probab=99.92  E-value=9.9e-26  Score=170.36  Aligned_cols=51  Identities=75%  Similarity=1.086  Sum_probs=49.0

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHHHHHHHHHHHHHhc
Q 015744          145 SLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLG  195 (401)
Q Consensus       145 ~~qItEALq~QmEVQRRLHEQLEVQRhLQLRIEAQGKYLQsiLEKAqe~La  195 (401)
                      +++|+|||++||||||||||||||||+||+|||||||||++|||||+++++
T Consensus         1 g~~i~EALr~QmEvQrrLhEQLEvQr~Lqlrieaqgkyl~~ilek~~~~~s   51 (51)
T PF14379_consen    1 GMQITEALRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQKALS   51 (51)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999999999999999999864

>PLN03162 golden-2 like transcription factor; Provisional

Probab=99.88  E-value=4.7e-23  Score=206.13  Aligned_cols=61  Identities=46%  Similarity=0.829  Sum_probs=58.2

Q ss_pred             CCCCCCccCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhhhhhccc
Q 015744           43 TDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNL  104 (401)
Q Consensus        43 ~~~KpRlrWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl~k~~  104 (401)
                      ..+|+||+||+|||++||+||++|| .++||||+||++|+|+|||++||||||||||+.++.
T Consensus       232 g~KKpRLrWTpELH~rFVeAV~qLG-~dKATPK~ILelMnV~GLTRenVKSHLQKYRl~rk~  292 (526)
T PLN03162        232 GKKKAKVDWTPELHRRFVHAVEQLG-VEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRH  292 (526)
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHhC-cCccchHHHHHHcCCCCcCHHHHHHHHHHHHHhccc
Confidence            4679999999999999999999999 799999999999999999999999999999999864

>TIGR01557 myb_SHAQKYF myb-like DNA-binding domain, SHAQKYF class

Probab=99.84  E-value=2.8e-21  Score=148.20  Aligned_cols=56  Identities=59%  Similarity=0.996  Sum_probs=54.5

Q ss_pred             CCCccCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhhhhh
Q 015744           46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS  101 (401)
Q Consensus        46 KpRlrWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl~  101 (401)
                      |+|++||+|+|.+||+||+.||+.+.||||.|+++|++++||+.+|+|||||||+.
T Consensus         1 k~r~~WT~eeh~~Fl~ai~~~G~g~~a~pk~I~~~~~~~~lT~~qV~SH~QKy~~k   56 (57)
T TIGR01557         1 KPRVVWTEDLHDRFLQAVQKLGGPDWATPKRILELMVVDGLTRDQVASHLQKYRLK   56 (57)
T ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCcccchHHHHHHcCCCCCCHHHHHHHHHHHHcc
Confidence            79999999999999999999998899999999999999999999999999999985

This model describes a DNA-binding domain restricted to (but common in) plant proteins, many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.

>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins

Probab=97.11  E-value=0.0011  Score=48.17  Aligned_cols=48  Identities=33%  Similarity=0.436  Sum_probs=41.0

Q ss_pred             CccCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhhh
Q 015744           48 RLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR   99 (401)
Q Consensus        48 RlrWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYR   99 (401)
                      |-.||++=+..|++||.++|. +  .-+.|-+.|+ .+-|..++++|.++|+
T Consensus         1 r~~Wt~eE~~~l~~~v~~~g~-~--~W~~Ia~~~~-~~Rt~~qc~~~~~~~~   48 (48)
T PF00249_consen    1 RGPWTEEEDEKLLEAVKKYGK-D--NWKKIAKRMP-GGRTAKQCRSRYQNLL   48 (48)
T ss_dssp             S-SS-HHHHHHHHHHHHHSTT-T--HHHHHHHHHS-SSSTHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHhCC-c--HHHHHHHHcC-CCCCHHHHHHHHHhhC
Confidence            568999999999999999992 1  5788999998 8999999999999985

These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....

>smart00426 TEA TEA domain

Probab=89.01  E-value=0.46  Score=38.80  Aligned_cols=46  Identities=28%  Similarity=0.423  Sum_probs=30.5

Q ss_pred             cCCHHHHHHHHHHHHHhCCCCCCCch-HHhhh---cC-----------CCCc--cHHHHHHhhhh
Q 015744           50 KWTPDLHERFIEAVNQLGGADKATPK-TVMKL---MG-----------IPGL--TLYHLKSHLQK   97 (401)
Q Consensus        50 rWT~eLH~rFV~AV~qLGG~~kAtPK-~IL~l---M~-----------v~gL--T~~hVkSHLQK   97 (401)
                      .|.++|-..|++|+...-  ...+-| .+...   .|           ..|.  |..+|.||+|.
T Consensus         5 vWp~~lE~Af~~aL~~~~--~~g~~kik~~~r~k~~gRNelIs~YI~~~tGk~Rt~KQVsShIQv   67 (68)
T smart00426        5 VWSPDIEQAFQEALAIYP--PCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQV   67 (68)
T ss_pred             cCcHHHHHHHHHHHHHcC--ccCcccchhhhcCcccchhHHHHHHHHHHhCCccchhhhcchhee
Confidence            699999999999999875  333332 22211   11           2444  78889999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	401
1irz_A	64	Solution Structure Of Arr10-B Belonging To The Garp		3e-08

>pdb|1IRZ|A Chain A, Solution Structure Of Arr10-B Belonging To The Garp Family Of Plant Myb-Related Dna Binding Motifs Of The Arabidopsis Response Regulators Length = 64

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 42  STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
           +   KPR+ WT +LH +F+ AV+ LG  ++A PK ++ LM +  LT  ++ SHLQK+R++
Sbjct: 1   TAQKKPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVA 59

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	401
1irz_A	64	ARR10-B; helix-turn-helix, DNA binding protein; NM	1e-24

>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11 Length = 64

 Score = 94.6 bits (235), Expect = 1e-24
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 42  STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
           +   KPR+ WT +LH +F+ AV+ LG  ++A PK ++ LM +  LT  ++ SHLQK+R++
Sbjct: 1   TAQKKPRVLWTHELHNKFLAAVDHLGV-ERAVPKKILDLMNVDKLTRENVASHLQKFRVA 59

Query: 102 K 102
            
Sbjct: 60  L 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	401
1irz_A	64	ARR10-B; helix-turn-helix, DNA binding protein; NM	99.95
2yus_A	79	SWI/SNF-related matrix-associated actin- dependent	88.92
2yum_A	75	ZZZ3 protein, zinc finger ZZ-type-containing prote	86.84
2cu7_A	72	KIAA1915 protein; nuclear protein, SANT domain, DN	84.73
1x41_A	60	Transcriptional adaptor 2-like, isoform B; transcr	80.54

>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11

Probab=99.95  E-value=9.5e-29  Score=192.95  Aligned_cols=61  Identities=41%  Similarity=0.810  Sum_probs=58.2

Q ss_pred             CCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhhhhhcc
Q 015744           42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKN  103 (401)
Q Consensus        42 s~~~KpRlrWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl~k~  103 (401)
                      ++.+||||+||+|||++||+||++|| .++||||.||++|+|+|||++||||||||||+..+
T Consensus         1 ~~~~k~r~~WT~elH~~Fv~Av~~LG-~~~AtPk~Il~~M~v~gLT~~~VkSHLQKYR~~l~   61 (64)
T 1irz_A            1 TAQKKPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVALK   61 (64)
T ss_dssp             CCCCCSSCSSCHHHHHHHHHHHHHHC-TTTCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcCCHHHHHHHHHHHHHhC-CCCCCcHHHHHHcCCCCCCHHHHHHHHHHHHHHHH
Confidence            46789999999999999999999999 79999999999999999999999999999999864

>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}

Probab=88.92  E-value=1.3  Score=35.10  Aligned_cols=48  Identities=15%  Similarity=0.106  Sum_probs=39.0

Q ss_pred             CCCccCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhhh
Q 015744           46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR   99 (401)
Q Consensus        46 KpRlrWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYR   99 (401)
                      ..+-.||++=+.+|++||...|+-    =+.|-+.|  ++=|..+++.|.++|-
T Consensus        16 ~~~~~WT~eEd~~Ll~~v~~~G~~----W~~IA~~v--~~RT~~qcr~r~~~~~   63 (79)
T 2yus_A           16 SAGREWTEQETLLLLEALEMYKDD----WNKVSEHV--GSRTQDECILHFLRLP   63 (79)
T ss_dssp             CCSCCCCHHHHHHHHHHHHHSSSC----HHHHHHHH--SSCCHHHHHHHHTTSC
T ss_pred             ccCCCcCHHHHHHHHHHHHHhCCC----HHHHHHHc--CCCCHHHHHHHHHHhc
Confidence            346789999999999999999932    35666666  4789999999999873

>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.84  E-value=1.2  Score=34.05  Aligned_cols=55  Identities=13%  Similarity=0.244  Sum_probs=41.5

Q ss_pred             CCCCccCCHHHHHHHHHHHHHhCCCCCCCch---HHhhhcCCCCccHHHHHHhhhhhhhhc
Q 015744           45 AKPRLKWTPDLHERFIEAVNQLGGADKATPK---TVMKLMGIPGLTLYHLKSHLQKYRLSK  102 (401)
Q Consensus        45 ~KpRlrWT~eLH~rFV~AV~qLGG~~kAtPK---~IL~lM~v~gLT~~hVkSHLQKYRl~k  102 (401)
                      ...+=.||+|=+++|++||..+| .+...|.   .|-+.|  +|=|..+|+.|.++|-...
T Consensus         5 ~~~~~~WT~eEd~~L~~~v~~~g-~~~~~~~~W~~IA~~~--~~Rt~~qcr~r~~~~l~~~   62 (75)
T 2yum_A            5 SSGNQLWTVEEQKKLEQLLIKYP-PEEVESRRWQKIADEL--GNRTAKQVASQVQKYFIKL   62 (75)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHSC-CCSCHHHHHHHHHHHH--SSSCHHHHHHHHHHHHGGG
T ss_pred             CCCCCCCCHHHHHHHHHHHHHhC-CCCCCcccHHHHHHHh--CCCCHHHHHHHHHHHHHHH
Confidence            34455899999999999999998 3322233   355554  6899999999999997654

>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3

Probab=84.73  E-value=2.1  Score=32.58  Aligned_cols=52  Identities=27%  Similarity=0.374  Sum_probs=41.3

Q ss_pred             CCCCccCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhhhhhc
Q 015744           45 AKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK  102 (401)
Q Consensus        45 ~KpRlrWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl~k  102 (401)
                      ...+-.||+|=++.|+++|..+|-    .=+.|-+.  ++|=|-.+|+.|.++|-..+
T Consensus         6 ~~~~~~WT~eEd~~l~~~~~~~G~----~W~~Ia~~--~~~Rt~~q~k~r~~~~l~~~   57 (72)
T 2cu7_A            6 SGYSVKWTIEEKELFEQGLAKFGR----RWTKISKL--IGSRTVLQVKSYARQYFKNK   57 (72)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHHTCS----CHHHHHHH--HSSSCHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHCc----CHHHHHHH--cCCCCHHHHHHHHHHHHHHH
Confidence            345668999999999999999992    33456565  47899999999999986554

>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1

Probab=80.54  E-value=1.8  Score=32.00  Aligned_cols=50  Identities=26%  Similarity=0.264  Sum_probs=39.5

Q ss_pred             CCCCccCCHHHHHHHHHHHHHhC-CCCCCCchHHhhhcCCCCccHHHHHHhhhhhhh
Q 015744           45 AKPRLKWTPDLHERFIEAVNQLG-GADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL  100 (401)
Q Consensus        45 ~KpRlrWT~eLH~rFV~AV~qLG-G~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl  100 (401)
                      .-.|-.||+|=.+++++||..+| +-    =+.|-+.|  +|=|-.+++.|.++|-.
T Consensus         5 ~~~~~~WT~eED~~L~~~v~~~G~~~----W~~Ia~~~--~~Rt~~qcr~r~~~~l~   55 (60)
T 1x41_A            5 SSGDPSWTAQEEMALLEAVMDCGFGN----WQDVANQM--CTKTKEECEKHYMKYFS   55 (60)
T ss_dssp             CCCCSSSCHHHHHHHHHHHHHTCTTC----HHHHHHHH--TTSCHHHHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCcCc----HHHHHHHh--CCCCHHHHHHHHHHHcc
Confidence            34556799999999999999999 32    24566666  67899999999988854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	401
d1irza_	64	a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis th	9e-23

>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: GARP response regulators
domain: Arr10-B
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 88.4 bits (219), Expect = 9e-23
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 42  STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
           +   KPR+ WT +LH +F+ AV+ LG  ++A PK ++ LM +  LT  ++ SHLQK+R++
Sbjct: 1   TAQKKPRVLWTHELHNKFLAAVDHLGV-ERAVPKKILDLMNVDKLTRENVASHLQKFRVA 59

Query: 102 K 102
            
Sbjct: 60  L 60

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	401
d1irza_	64	Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId	99.92
d2cu7a1	65	MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 960	89.23
d1x41a1	47	Transcriptional adaptor 2-like, TADA2L, isoform b	82.07

>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: GARP response regulators
domain: Arr10-B
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=3.2e-26  Score=176.69  Aligned_cols=61  Identities=41%  Similarity=0.791  Sum_probs=57.5

Q ss_pred             CCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhhhhhcc
Q 015744           42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKN  103 (401)
Q Consensus        42 s~~~KpRlrWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl~k~  103 (401)
                      |+.+|||++||+|||++||+||++||+ ++||||.|+++|+|+|||+.||+|||||||+...
T Consensus         1 s~~kk~R~~WT~elH~~Fv~Av~~lG~-~~atpk~I~~~m~v~~lT~~qV~SHlQKYrl~l~   61 (64)
T d1irza_           1 TAQKKPRVLWTHELHNKFLAAVDHLGV-ERAVPKKILDLMNVDKLTRENVASHLQKFRVALK   61 (64)
T ss_dssp             CCCCCSSCSSCHHHHHHHHHHHHHHCT-TTCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHhCc-cccchHHHHHHcCCCCCCHHHHHHHHHHHHHHHH
Confidence            467899999999999999999999985 8999999999999999999999999999999864

>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Myb/SANT domain
domain: MYSM1 (KIAA1915)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.23  E-value=0.58  Score=33.11  Aligned_cols=49  Identities=27%  Similarity=0.408  Sum_probs=39.3

Q ss_pred             CccCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhhhhhc
Q 015744           48 RLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK  102 (401)
Q Consensus        48 RlrWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl~k  102 (401)
                      ..+||+|=+..|++||...|.    .=..|-+.|  ++=|..+|++|.++|-...
T Consensus         2 ~~~WT~eEd~~l~~~~~~~G~----~W~~Ia~~~--~~Rt~~q~k~ry~~~~~~~   50 (65)
T d2cu7a1           2 SVKWTIEEKELFEQGLAKFGR----RWTKISKLI--GSRTVLQVKSYARQYFKNK   50 (65)
T ss_dssp             CCCCCHHHHHHHHHHHHHTCS----CHHHHHHHH--SSSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHhcc----hHHHHHHHc--CCCCHHHHHHHHHHHHHHH
Confidence            468999999999999999993    233555555  5789999999999886554

>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Transcriptional adaptor 2-like, TADA2L, isoform b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.07  E-value=1.2  Score=30.19  Aligned_cols=44  Identities=27%  Similarity=0.313  Sum_probs=34.8

Q ss_pred             cCCHHHHHHHHHHHHHhCCCCCCCchHHhhhcCCCCccHHHHHHhhhhh
Q 015744           50 KWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKY   98 (401)
Q Consensus        50 rWT~eLH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKY   98 (401)
                      .||.+=..+|++||...| .  .-=+.|-+.|+  +=|..+++.|.++|
T Consensus         3 ~Wt~eEd~~L~~~v~~~G-~--~nW~~Ia~~~~--~Rt~~Qcr~r~~~~   46 (47)
T d1x41a1           3 SWTAQEEMALLEAVMDCG-F--GNWQDVANQMC--TKTKEECEKHYMKY   46 (47)
T ss_dssp             SSCHHHHHHHHHHHHHTC-T--TCHHHHHHHHT--TSCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHC-C--ccHHHHHHHcC--CCCHHHHHHHHHHh
Confidence            499999999999999998 1  12345666665  56999999999887