Citrus Sinensis ID: 015748


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-
MVVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
ccccccccccccccHHHHHcccccccccccccccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHcHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccHHHHHHHHHHHccHHHHcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHccc
cccccEEEEcccccccHHHccccHcHccEccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHcHcccccccccccHHHHHHHcccccccccHcccHHHHHHHHHHHcccHHHHccccHHHHHHccHHHEEHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccccccccHccccHHHHHHHHHHHccccEEEccccHHHHHHccHHHEEHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHccccccc
mvvgsrvsvpswmSAAAATRVDLEGSVSSVtvssetsskeeALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAqaagvpyeglcrtasfesnmmlsdmrnspsctcavpgtepapecnrykgtLDLFYKVVRQEGFARLWRGTYASLAlsvptvgiylpcydgfrnlmenfttgnapmltpyvplvAGSVARSLACISCYPIELARTRMQAFtetqsgvkppgvwKTLVGVvnplksrnssqklqNYRILWTGVGaqlardvpfsaicwstlePIRRSILSLvgddarvtsilganftggfvaGSIAAaatcpldvsrtrhqiekdptralnmTTRQTLMEIWRdggmkglftgvgprvaragpsvgIVVSFYEVVKYALYQRHQLNN
mvvgsrvsvpswmSAAAATRVDLEGSVSSVTVssetsskeealRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAqaagvpyeGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTetqsgvkppgvWKTLVGVVnplksrnssqklqNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATcpldvsrtrhqiekdptralnmttRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
MVVGSRVSVPSWMSAAAATRVDLEGsvssvtvssetsskeeALRHSEAINDFSLgfaerafsaagaaivsavivNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
************************************************INDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFE*************CTCAVPGT**APECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLK*****QKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQI*****RALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQR*****
**********************************************************RAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQA*************WKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSIL**********SILGANFTGGFVAGSIAAAATCPLDVSRT****************RQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKY***Q******
**********SWMSAAAATR***********************RHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
*VVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSG***PGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQR*****
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MVVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query401 2.2.26 [Sep-21-2011]
Q944H5413 Mitochondrial carrier pro no no 0.875 0.849 0.642 1e-131
Q498U3337 Solute carrier family 25 yes no 0.775 0.922 0.323 7e-38
Q8TBP6338 Solute carrier family 25 yes no 0.768 0.911 0.316 3e-37
Q0VCH6338 Solute carrier family 25 yes no 0.763 0.905 0.303 3e-36
Q6DHC3353 Solute carrier family 25 yes no 0.763 0.866 0.315 3e-36
Q8BGP6337 Solute carrier family 25 yes no 0.775 0.922 0.309 2e-35
Q17QI7359 Solute carrier family 25 no no 0.788 0.880 0.308 3e-35
Q7SXW0359 Solute carrier family 25 no no 0.812 0.908 0.297 3e-35
Q9BZJ4359 Solute carrier family 25 no no 0.788 0.880 0.304 4e-35
Q4V8K4359 Solute carrier family 25 yes no 0.795 0.888 0.297 3e-34
>sp|Q944H5|MTM1_ARATH Mitochondrial carrier protein MTM1 OS=Arabidopsis thaliana GN=MTM1 PE=2 SV=1 Back     alignment and function desciption
 Score =  468 bits (1204), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 232/361 (64%), Positives = 281/361 (77%), Gaps = 10/361 (2%)

Query: 46  SEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPY-----EGLCRTA 100
            + +++ ++GF ER FSAAGAA++SAV +NPLDV KTRLQAQAAG+ Y       + R A
Sbjct: 51  DKGLSENNIGFTERVFSAAGAAVLSAVTLNPLDVVKTRLQAQAAGMSYSHPLSNSIGRMA 110

Query: 101 SFESNMMLSDMRNSPSCTCA-VPGTEPA--PECNRYKGTLDLFYKVVRQEGFARLWRGTY 157
            F  NMM +D+R SPSC  A V GT     P+C +YKGT D+F K++RQEG  RLWRGT 
Sbjct: 111 FFGPNMMFADLRCSPSCARAGVEGTVSICPPDCFQYKGTFDVFTKIIRQEGLGRLWRGTN 170

Query: 158 ASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIEL 217
           A LAL+VP VGIYLP YD FRN +E  +   AP +T  VP VAGS+ARSLAC  CYPI+L
Sbjct: 171 AGLALAVPMVGIYLPFYDMFRNRLEELSREKAPAMTFCVPTVAGSLARSLACTVCYPIDL 230

Query: 218 ARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQK-LQNYRILWTGVGAQLARDVP 276
           ARTRMQAF E ++GVKPPGV+KTLVGV + +++ N+ +  L NYR LW G+GAQLARDVP
Sbjct: 231 ARTRMQAFKEAKAGVKPPGVFKTLVGVFSEVRTANNLESSLHNYRGLWRGLGAQLARDVP 290

Query: 277 FSAICWSTLEPIRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQI 336
           FSAICWSTLEPI++ +L + G+D  +  + GA F+ GF+AGSIAAAATCPLDV+RTR QI
Sbjct: 291 FSAICWSTLEPIKKRLLGVAGNDTNLVGVFGATFSAGFIAGSIAAAATCPLDVARTRRQI 350

Query: 337 EKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQR 396
           EKDP RAL MTTRQTL+E+WRDGGM+GLF G+GPRVARAGPSVGIVVSFYEVVKY L+ R
Sbjct: 351 EKDPGRALMMTTRQTLIEVWRDGGMRGLFMGMGPRVARAGPSVGIVVSFYEVVKYVLH-R 409

Query: 397 H 397
           H
Sbjct: 410 H 410




Involved in the mitochondrial activation of MSD1 by specifically facilitating insertion of the essential manganese cofactor. Has the ability to activate iron regulon in an iron-dependent manner.
Arabidopsis thaliana (taxid: 3702)
>sp|Q498U3|S2540_RAT Solute carrier family 25 member 40 OS=Rattus norvegicus GN=Slc25a40 PE=2 SV=2 Back     alignment and function description
>sp|Q8TBP6|S2540_HUMAN Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=2 SV=1 Back     alignment and function description
>sp|Q0VCH6|S2540_BOVIN Solute carrier family 25 member 40 OS=Bos taurus GN=SLC25A40 PE=2 SV=1 Back     alignment and function description
>sp|Q6DHC3|S2540_DANRE Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1 Back     alignment and function description
>sp|Q8BGP6|S2540_MOUSE Solute carrier family 25 member 40 OS=Mus musculus GN=Slc25a40 PE=2 SV=1 Back     alignment and function description
>sp|Q17QI7|S2539_BOVIN Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2 Back     alignment and function description
>sp|Q7SXW0|S2539_DANRE Solute carrier family 25 member 39 OS=Danio rerio GN=slc25a39 PE=2 SV=1 Back     alignment and function description
>sp|Q9BZJ4|S2539_HUMAN Solute carrier family 25 member 39 OS=Homo sapiens GN=SLC25A39 PE=2 SV=2 Back     alignment and function description
>sp|Q4V8K4|S2539_RAT Solute carrier family 25 member 39 OS=Rattus norvegicus GN=Slc25a39 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query401
225454448407 PREDICTED: solute carrier family 25 memb 0.995 0.980 0.718 1e-169
147812722 528 hypothetical protein VITISV_014580 [Viti 0.990 0.751 0.708 1e-168
297745394374 unnamed protein product [Vitis vinifera] 0.887 0.951 0.747 1e-159
224064175399 predicted protein [Populus trichocarpa] 0.977 0.982 0.698 1e-155
449432094404 PREDICTED: solute carrier family 25 memb 0.982 0.975 0.676 1e-153
242079023399 hypothetical protein SORBIDRAFT_07g01943 0.982 0.987 0.695 1e-150
308080630399 uncharacterized protein LOC100502509 [Ze 0.982 0.987 0.687 1e-150
226507384398 mitochondrial carrier protein CGI-69 [Ze 0.980 0.987 0.692 1e-149
194696384398 unknown [Zea mays] 0.980 0.987 0.692 1e-149
413922178398 carrier protein CGI-69 [Zea mays] 0.980 0.987 0.692 1e-149
>gi|225454448|ref|XP_002276620.1| PREDICTED: solute carrier family 25 member 39-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 291/405 (71%), Positives = 343/405 (84%), Gaps = 6/405 (1%)

Query: 2   VVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEAL---RHSEAINDFSLGFAE 58
           +VGSR S+PSW+  AAATRVD+EG+VSS++ +    ++EE+    ++S+A++D  LGF +
Sbjct: 1   MVGSRPSLPSWI-GAAATRVDIEGNVSSMSDTMFRENREESAPPEQYSKALSDGDLGFGQ 59

Query: 59  RAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCT 118
           RAFSAAGAA +SA+IVNPLDVAKTRLQAQAAGV Y GLCR A FE+  M SD+R SPSCT
Sbjct: 60  RAFSAAGAAFISAIIVNPLDVAKTRLQAQAAGVSYHGLCRMAPFETVSMFSDVRYSPSCT 119

Query: 119 CAVPGTEPA--PECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDG 176
            A     P   P+C +Y+GTLD+F K++RQEGF RLWRGT ASLAL++PTVGIYLPCYD 
Sbjct: 120 RAALSDVPVCPPDCFQYRGTLDVFSKMIRQEGFMRLWRGTSASLALAMPTVGIYLPCYDI 179

Query: 177 FRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPG 236
           FRN ME FTT NAP LTPYVPLVAGS+ARSLACI+CYP+ELARTRMQAF ETQSG KPPG
Sbjct: 180 FRNFMEEFTTQNAPSLTPYVPLVAGSLARSLACITCYPVELARTRMQAFKETQSGTKPPG 239

Query: 237 VWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLV 296
           VWKTL GV++P++S N+ Q  Q+YR+LWTG+GAQLARDVPFSAICWSTLEPIRR I+ L+
Sbjct: 240 VWKTLHGVISPVRSTNNIQNFQSYRVLWTGLGAQLARDVPFSAICWSTLEPIRRRIIGLI 299

Query: 297 GDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIW 356
           GD+A   S+LGANF+ GFVAGS+AAAATCPLDV++TR QIEKDPTRA  MTTRQTL+EIW
Sbjct: 300 GDEATAASVLGANFSAGFVAGSLAAAATCPLDVAKTRRQIEKDPTRAWKMTTRQTLLEIW 359

Query: 357 RDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYALYQRHQLNN 401
           RDGGM+GLFTG+GPRV RAGPSVGIVVSFYEVVKY L+ R QLNN
Sbjct: 360 RDGGMRGLFTGIGPRVGRAGPSVGIVVSFYEVVKYGLHHRRQLNN 404




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812722|emb|CAN61750.1| hypothetical protein VITISV_014580 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745394|emb|CBI40474.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224064175|ref|XP_002301398.1| predicted protein [Populus trichocarpa] gi|222843124|gb|EEE80671.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449432094|ref|XP_004133835.1| PREDICTED: solute carrier family 25 member 40-like [Cucumis sativus] gi|449477895|ref|XP_004155155.1| PREDICTED: solute carrier family 25 member 40-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|242079023|ref|XP_002444280.1| hypothetical protein SORBIDRAFT_07g019430 [Sorghum bicolor] gi|241940630|gb|EES13775.1| hypothetical protein SORBIDRAFT_07g019430 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|308080630|ref|NP_001183916.1| uncharacterized protein LOC100502509 [Zea mays] gi|238015420|gb|ACR38745.1| unknown [Zea mays] gi|414870516|tpg|DAA49073.1| TPA: hypothetical protein ZEAMMB73_432177 [Zea mays] Back     alignment and taxonomy information
>gi|226507384|ref|NP_001150430.1| mitochondrial carrier protein CGI-69 [Zea mays] gi|195639200|gb|ACG39068.1| mitochondrial carrier protein CGI-69 [Zea mays] Back     alignment and taxonomy information
>gi|194696384|gb|ACF82276.1| unknown [Zea mays] Back     alignment and taxonomy information
>gi|413922178|gb|AFW62110.1| carrier protein CGI-69 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query401
TAIR|locus:2039055361 AT2G46320 [Arabidopsis thalian 0.795 0.883 0.687 7.7e-119
TAIR|locus:2132947413 MTM1 "AT4G27940" [Arabidopsis 0.802 0.779 0.656 3.3e-111
UNIPROTKB|I3LL52331 SLC25A39 "Uncharacterized prot 0.743 0.900 0.320 1.8e-32
SGD|S000003489366 MTM1 "Mitochondrial protein of 0.633 0.693 0.322 2.6e-32
UNIPROTKB|Q9BZJ4359 SLC25A39 "Solute carrier famil 0.743 0.830 0.320 3.7e-32
MGI|MGI:1196386359 Slc25a39 "solute carrier famil 0.740 0.827 0.328 2e-31
RGD|1306193359 Slc25a39 "solute carrier famil 0.748 0.835 0.315 2e-31
UNIPROTKB|F1PQ27350 SLC25A39 "Uncharacterized prot 0.740 0.848 0.324 2.6e-31
POMBASE|SPBP23A10.06335 SPBP23A10.06 "mitochondrial ma 0.608 0.728 0.325 9.9e-31
ZFIN|ZDB-GENE-040426-1250359 slc25a39 "solute carrier famil 0.748 0.835 0.314 1.1e-30
TAIR|locus:2039055 AT2G46320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
 Identities = 224/326 (68%), Positives = 261/326 (80%)

Query:    75 NPLDVAKTRLQAQAAGVPYEGLCRTASFESNMML-SDMR-NSPSCTCAVPGTEPAPECNR 132
             NPLDV KTRLQAQAAGVPY+G CR   F++N  L  D+R NS    C + G+      N+
Sbjct:    40 NPLDVVKTRLQAQAAGVPYQGSCRLGCFDTNSTLVHDLRSNSAPGMCRITGSASVCSDNQ 99

Query:   133 YKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPML 192
             YKGTLD+FYK++RQEGF+RLWRGT ASL L++PTVGIY+PCYD FRN+ME FTT  +P L
Sbjct:   100 YKGTLDVFYKIIRQEGFSRLWRGTNASLTLAIPTVGIYMPCYDYFRNIMEEFTTEKSPSL 159

Query:   193 TPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRN 252
             T YVPLVAG++ARSLACISCYP+ELARTRMQAF  TQ  VK PGVWKTLV VVNP+K  N
Sbjct:   160 TVYVPLVAGTIARSLACISCYPVELARTRMQAFKGTQRNVKLPGVWKTLVDVVNPVKGSN 219

Query:   253 SSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVGDDARVTSILGANFTG 312
             +      YR+LWTG+GAQLARDVPFSAICWS LEP RRSI S +G++ R  SI+GANF  
Sbjct:   220 NG-----YRMLWTGLGAQLARDVPFSAICWSILEPTRRSIQSAMGEEPRAGSIIGANFAA 274

Query:   313 GFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRV 372
             GFVAG++AAAATCPLDV++TR QIEK+  RA+ MTTRQTL EIWRDGGM+G+F+G G RV
Sbjct:   275 GFVAGAVAAAATCPLDVAKTRRQIEKNTDRAMTMTTRQTLAEIWRDGGMRGMFSGAGARV 334

Query:   373 ARAGPSVGIVVSFYEVVKYALYQRHQ 398
              RAGPSV IVVSFYEVVKY L+  HQ
Sbjct:   335 GRAGPSVAIVVSFYEVVKYGLHNFHQ 360




GO:0005215 "transporter activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2132947 MTM1 "AT4G27940" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|I3LL52 SLC25A39 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
SGD|S000003489 MTM1 "Mitochondrial protein of the mitochondrial carrier family" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BZJ4 SLC25A39 "Solute carrier family 25 member 39" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1196386 Slc25a39 "solute carrier family 25, member 39" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1306193 Slc25a39 "solute carrier family 25, member 39" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PQ27 SLC25A39 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
POMBASE|SPBP23A10.06 SPBP23A10.06 "mitochondrial manganese ion transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1250 slc25a39 "solute carrier family 25, member 39" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-18
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-16
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-06
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 9e-06
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-04
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.002
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 78.8 bits (195), Expect = 3e-18
 Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 38/129 (29%)

Query: 53  SLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMR 112
            L F     +   A  ++A +  PLDV KTRLQ+ AAG                      
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSR------------------- 42

Query: 113 NSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLP 172
                              +YKG LD F K+ ++EG   L++G   +L    P   IY  
Sbjct: 43  -------------------KYKGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFG 83

Query: 173 CYDGFRNLM 181
            Y+  + L+
Sbjct: 84  TYETLKKLL 92


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 401
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.98
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.98
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.97
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.95
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.95
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.95
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.94
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.94
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.94
KOG0765333 consensus Predicted mitochondrial carrier protein 99.94
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.93
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.93
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.93
KOG0036463 consensus Predicted mitochondrial carrier protein 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.92
KOG0766297 consensus Predicted mitochondrial carrier protein 99.92
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.91
KOG2745321 consensus Mitochondrial carrier protein [General f 99.91
KOG1519297 consensus Predicted mitochondrial carrier protein 99.89
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
KOG2954427 consensus Mitochondrial carrier protein [General f 99.74
KOG1519297 consensus Predicted mitochondrial carrier protein 99.67
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.62
KOG2745321 consensus Mitochondrial carrier protein [General f 99.56
KOG2954427 consensus Mitochondrial carrier protein [General f 98.42
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=4.4e-62  Score=428.62  Aligned_cols=293  Identities=23%  Similarity=0.325  Sum_probs=262.9

Q ss_pred             HHHHHHHhhhhHHHHhhcChHHHHHHHHhhccCCCCCCccccccccccccccccccCCCCcccCCCCCCCCCccccCCCh
Q 015748           57 AERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGT  136 (401)
Q Consensus        57 ~~~~~ag~~ag~~~~~~~~Pld~vk~~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (401)
                      ++.+++|++||+++.+++||||++|+|+|++...                                    ....+.|+++
T Consensus         6 ~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~------------------------------------~~~~~~y~g~   49 (299)
T KOG0764|consen    6 WEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR------------------------------------TSLRPAYKGI   49 (299)
T ss_pred             hhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc------------------------------------cccchhhccH
Confidence            4566999999999999999999999999998421                                    1223479999


Q ss_pred             HHHHHHHHHhhccchhccchhhhhhccccccceecchHHHHHHHHhhhcCCCCCCCCchhhhhHHHHHHHHHHHhhchHH
Q 015748          137 LDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIE  216 (401)
Q Consensus       137 ~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~~~f~~y~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pld  216 (401)
                      +++++.|++.||++|||||+.|+++++.+.|++||.+|+.+|.++.+..+..  .++...++.+++.||++..++++|+|
T Consensus        50 ~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~~Y~~~K~~~~~~~~~~--~l~~~~~l~sa~~AGa~t~~lTNPIW  127 (299)
T KOG0764|consen   50 FGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFFFYDFLKSFITEGFNSG--LLSVLANLSSAAEAGAATTILTNPIW  127 (299)
T ss_pred             HHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHHHHHHHHHHHhcCCCcc--cchHHHHHHHHHhhhHHHHHhcCCeE
Confidence            9999999999999999999999999999999999999999999996644432  35788899999999999999999999


Q ss_pred             HHHHHhhcccccCCCCCCCchhhHHhhhhccccccccccccccchhcccchHHhhhhhcccchhhhhchHHHHHHHhhhh
Q 015748          217 LARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLV  296 (401)
Q Consensus       217 viktr~q~~~~~~~~~~y~~~~~~~~~i~~~~~~~~~~~~~~G~~glyrG~~~~ll~~~~~~~~~f~~ye~lk~~~~~~~  296 (401)
                      |+|||++.|........|+++++++++|+++|          |++|||+|+.|.+++ +...+++|.+||.+|....+..
T Consensus       128 VvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~E----------G~rgLY~GlVP~L~G-vshgAiQF~~YE~lK~~~~~~~  196 (299)
T KOG0764|consen  128 VVKTRLMLQSKNVQSTAYKGMFDALRKIYKEE----------GFRGLYKGLVPGLLG-VSHGAIQFPAYEELKLRKNRKQ  196 (299)
T ss_pred             EEeehhhhhcccccccccccHHHHHHHHHHHH----------hHHHHHhhhhhHhhh-hchhhhhhhhHHHHHHHHHHhc
Confidence            99999999988777778999999999999999          999999999999996 7799999999999999998776


Q ss_pred             CCCccccccchhhhhhhHHHhhhHhhhccchhhhhhhhhccCCCCccCCCCHHHHHHHHHHhcCccccccchhHHHhhhc
Q 015748          297 GDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAG  376 (401)
Q Consensus       297 ~~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldvvr~rlq~~~~~~~~~y~~~~~~~~~i~~~eG~~g~yrG~~~~l~r~~  376 (401)
                      +...+........+..+.++.++++++|||++|||+|||.++.  .+.|.++++|++++|++||++|||||+.++++|++
T Consensus       197 ~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~--~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~v  274 (299)
T KOG0764|consen  197 GRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSD--NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTV  274 (299)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhccc--CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhcc
Confidence            6665555555557777779999999999999999999999875  56789999999999999999999999999999999


Q ss_pred             ccceeeHHhHHHHHHHHHhhhccC
Q 015748          377 PSVGIVVSFYEVVKYALYQRHQLN  400 (401)
Q Consensus       377 p~~~i~~~~ye~~~~~l~~~~~~~  400 (401)
                      |.++|+|++||.+++.|..+....
T Consensus       275 PA~~ITF~vyEnv~~~L~~~~~~~  298 (299)
T KOG0764|consen  275 PAACITFLVYENVKHFLVTHRTKI  298 (299)
T ss_pred             ccceeeeehHHHHHHHHhcccccc
Confidence            999999999999999998876543



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-10
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 7e-06
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 4e-06
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/325 (23%), Positives = 123/325 (37%), Gaps = 56/325 (17%) Query: 76 PLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKG 135 PLD AK RLQ Q +GL RTA+ +Y+G Sbjct: 21 PLDTAKVRLQIQGES---QGLVRTAA----------------------------SAQYRG 49 Query: 136 TLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPY 195 L +VR EG L+ G A L + + + YD ++ F T + Sbjct: 50 VLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDS----VKQFYTKGSEHAGIG 105 Query: 196 VPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQ 255 L+AGS +LA P ++ + R QA G + + +++ + Sbjct: 106 SRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQ----------STVEAYKTIA 155 Query: 256 KLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSIL--SLVGDDARVTSILGANFTGG 313 + + R LW G +AR+ + T + I+ ++L +L+ DD L +FT Sbjct: 156 REEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDD------LPCHFTSA 209 Query: 314 FVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVA 373 F AG P+DV +TR+ + + + + R G + + G P Sbjct: 210 FGAGFCTTVIASPVDVVKTRYM---NSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFL 266 Query: 374 RAGPSVGIVVSFYEVVKYALYQRHQ 398 R G ++ YE +K AL +Q Sbjct: 267 RLGSWNVVMFVTYEQLKRALMAAYQ 291
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-41
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-24
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-21
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-35
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-26
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 7e-24
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 8e-11
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-09
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  145 bits (368), Expect = 8e-41
 Identities = 63/348 (18%), Positives = 117/348 (33%), Gaps = 55/348 (15%)

Query: 50  NDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLS 109
           +D +L F +   +   AA +S   V P++  K  LQ Q A                    
Sbjct: 1   SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAE------------- 47

Query: 110 DMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGI 169
                                 +YKG +D   ++ +++GF   WRG  A++    PT  +
Sbjct: 48  ---------------------KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQAL 86

Query: 170 YLPCYDGFRN-LMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTET 228
                D ++   +                L +G  A + +    YP++ ARTR+ A    
Sbjct: 87  NFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK 146

Query: 229 QSGV-KPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEP 287
            +   +  G+   +  +           K    R L+ G    +   + + A  +   + 
Sbjct: 147 GAAQREFTGLGNCITKIF----------KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDT 196

Query: 288 IRRSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNM- 346
            +  +      D +   I+  ++       ++A   + P D  R R  ++     A  M 
Sbjct: 197 AKGMLP-----DPKNVHII-VSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMY 250

Query: 347 -TTRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEVVKYAL 393
             T     +I +D G K  F G    V R       V+  Y+ +K  +
Sbjct: 251 TGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEIKKFV 297


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query401
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=8.4e-56  Score=419.04  Aligned_cols=288  Identities=24%  Similarity=0.320  Sum_probs=250.3

Q ss_pred             HHHHHHhhhhHHHHhhcChHHHHHHHHhhccCCCCCCccccccccccccccccccCCCCcccCCCCCCCCCccccCCChH
Q 015748           58 ERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTL  137 (401)
Q Consensus        58 ~~~~ag~~ag~~~~~~~~Pld~vk~~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (401)
                      ..+++|++||+++.+++||||++|+|+|++.......            .                   ......|++++
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~------------~-------------------~~~~~~~~~~~   51 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLV------------R-------------------TAASAQYRGVL   51 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHH------------H-------------------HCSCSSCSCHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhcccccc------------c-------------------cccCCCCCCHH
Confidence            3689999999999999999999999999986321000            0                   00123689999


Q ss_pred             HHHHHHHHhhccchhccchhhhhhccccccceecchHHHHHHHHhhhcCCCCCCCCchhhhhHHHHHHHHHHHhhchHHH
Q 015748          138 DLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIEL  217 (401)
Q Consensus       138 ~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~~~f~~y~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pldv  217 (401)
                      +++++|+++||+++||||+.+++++.++..+++|.+||.+|+.+....+    ..+....+++|++||+++.++++|+|+
T Consensus        52 ~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~~----~~~~~~~~~ag~~ag~~~~~~~~Pld~  127 (303)
T 2lck_A           52 GTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSE----HAGIGSRLLAGSTTGALAVAVAQPTDV  127 (303)
T ss_dssp             HHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCCS----SCCHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc----CCcHHHHHHHHHHHHHHHHHHcCcHHH
Confidence            9999999999999999999999999999999999999999998865321    245778999999999999999999999


Q ss_pred             HHHHhhcccccCCCCCCCchhhHHhhhhccccccccccccccchhcccchHHhhhhhcccchhhhhchHHHHHHHhhhhC
Q 015748          218 ARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIRRSILSLVG  297 (401)
Q Consensus       218 iktr~q~~~~~~~~~~y~~~~~~~~~i~~~~~~~~~~~~~~G~~glyrG~~~~ll~~~~~~~~~f~~ye~lk~~~~~~~~  297 (401)
                      ||+|+|++.......+|+++++++++|+++|          |++|||||+.+++++.+|+.+++|.+||.+|+.+.+...
T Consensus       128 vktrlq~~~~~~~~~~~~~~~~~~~~i~~~e----------G~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~  197 (303)
T 2lck_A          128 VKVRFQAQARAGGGRRYQSTVEAYKTIAREE----------GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL  197 (303)
T ss_dssp             HHHHHHHSCSCCCSSSCCCHHHHHHHHHHHH----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS
T ss_pred             HHHHHhcccccCCCCCCCCHHHHHHHHHHhc----------ChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999999875433347899999999999999          999999999999999999999999999999998775332


Q ss_pred             CCccccccchhhhhhhHHHhhhHhhhccchhhhhhhhhccCCCCccCCCCHHHHHHHHHHhcCccccccchhHHHhhhcc
Q 015748          298 DDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPTRALNMTTRQTLMEIWRDGGMKGLFTGVGPRVARAGP  377 (401)
Q Consensus       298 ~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldvvr~rlq~~~~~~~~~y~~~~~~~~~i~~~eG~~g~yrG~~~~l~r~~p  377 (401)
                      .    .......+++|++||++++++++|+||||+|||++..   ..|.++++|+++|+++||++|||||+.|+++|.+|
T Consensus       198 ~----~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~---~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p  270 (303)
T 2lck_A          198 M----TDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL---GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGS  270 (303)
T ss_dssp             C----CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS---SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHH
T ss_pred             C----CCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc---cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHh
Confidence            1    1233458999999999999999999999999999864   24889999999999999999999999999999999


Q ss_pred             cceeeHHhHHHHHHHHHhhh
Q 015748          378 SVGIVVSFYEVVKYALYQRH  397 (401)
Q Consensus       378 ~~~i~~~~ye~~~~~l~~~~  397 (401)
                      .++++|.+||.+++.+.+..
T Consensus       271 ~~~i~f~~ye~~k~~l~~~~  290 (303)
T 2lck_A          271 WNVVMFVTYEQLKRALMAAY  290 (303)
T ss_dssp             HHHHHHHHHHHHHSCCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhc
Confidence            99999999999998876544



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 401
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-22
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-13
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 92.9 bits (229), Expect = 5e-22
 Identities = 58/341 (17%), Positives = 112/341 (32%), Gaps = 52/341 (15%)

Query: 51  DFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSD 110
           D +L F +   +   AA +S   V P++  K  LQ Q                       
Sbjct: 1   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQ----------------------- 37

Query: 111 MRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIY 170
                        ++      +YKG +D   ++ +++GF   WRG  A++    PT  + 
Sbjct: 38  -----------HASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALN 86

Query: 171 LPCYDGFRNLMENFTTGNAPMLTPYV-PLVAGSVARSLACISCYPIELARTRMQAFTETQ 229
               D ++ +       +      +   L +G  A + +    YP++ ARTR+ A     
Sbjct: 87  FAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV--- 143

Query: 230 SGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIR 289
                    +   G+ N +       K    R L+ G    +   + + A  +   +  +
Sbjct: 144 ---GKGAAQREFTGLGNCITKI---FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK 197

Query: 290 RSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKD--PTRALNMT 347
                           +  ++       ++A   + P D  R R  ++        +   
Sbjct: 198 GM------LPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTG 251

Query: 348 TRQTLMEIWRDGGMKGLFTGVGPRVARAGPSVGIVVSFYEV 388
           T     +I +D G K  F G    V R      ++V + E+
Sbjct: 252 TVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query401
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=4.1e-51  Score=382.52  Aligned_cols=287  Identities=20%  Similarity=0.297  Sum_probs=248.0

Q ss_pred             CCCCHHHHHHHHhhhhHHHHhhcChHHHHHHHHhhccCCCCCCccccccccccccccccccCCCCcccCCCCCCCCCccc
Q 015748           52 FSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECN  131 (401)
Q Consensus        52 ~~~~~~~~~~ag~~ag~~~~~~~~Pld~vk~~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (401)
                      ..+++.+.+++|++||+++.+++||||+||+|+|++..+..                                  .....
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~----------------------------------~~~~~   47 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ----------------------------------ISAEK   47 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS----------------------------------CCGGG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCC----------------------------------CCccc
Confidence            45678999999999999999999999999999999874321                                  12234


Q ss_pred             cCCChHHHHHHHHHhhccchhccchhhhhhccccccceecchHHHHHHHHhhhcCCCCCC-CCchhhhhHHHHHHHHHHH
Q 015748          132 RYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPM-LTPYVPLVAGSVARSLACI  210 (401)
Q Consensus       132 ~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~~~f~~y~~~~~~~~~~~~~~~~~-~~~~~~~~ag~~ag~~~~~  210 (401)
                      .|+++++++++++++||+++||+|+.+.+++..+...++|.+|+.+++.+.......... ......+++|++|++++.+
T Consensus        48 ~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  127 (292)
T d1okca_          48 QYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLC  127 (292)
T ss_dssp             SCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHh
Confidence            689999999999999999999999999999999999999999999999988766443221 1234578899999999999


Q ss_pred             hhchHHHHHHHhhcccccCC-CCCCCchhhHHhhhhccccccccccccccchhcccchHHhhhhhcccchhhhhchHHHH
Q 015748          211 SCYPIELARTRMQAFTETQS-GVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPIR  289 (401)
Q Consensus       211 v~~Pldviktr~q~~~~~~~-~~~y~~~~~~~~~i~~~~~~~~~~~~~~G~~glyrG~~~~ll~~~~~~~~~f~~ye~lk  289 (401)
                      +++|+|++|+|+|++..... ...|.+..++++++++++          |+++||+|+.+.+++.+++.+++|.+||.+|
T Consensus       128 ~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k  197 (292)
T d1okca_         128 FVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSD----------GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK  197 (292)
T ss_dssp             HHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHH----------CHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhheeeeccccccccccccccHHHHHHHhhhcc----------chhhhhccccccccceehHhhhhhhhccchh
Confidence            99999999999999875433 336889999999999999          9999999999999999999999999999999


Q ss_pred             HHHhhhhCCCccccccchhhhhhhHHHhhhHhhhccchhhhhhhhhccCCCC--ccCCCCHHHHHHHHHHhcCccccccc
Q 015748          290 RSILSLVGDDARVTSILGANFTGGFVAGSIAAAATCPLDVSRTRHQIEKDPT--RALNMTTRQTLMEIWRDGGMKGLFTG  367 (401)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldvvr~rlq~~~~~~--~~~y~~~~~~~~~i~~~eG~~g~yrG  367 (401)
                      +.+.+..      .......+++++++++++++++||+||||+|||.+....  ...|.++++|+++|+++||++|||||
T Consensus       198 ~~~~~~~------~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG  271 (292)
T d1okca_         198 GMLPDPK------NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKG  271 (292)
T ss_dssp             HSSCGGG------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTT
T ss_pred             hhccccc------ccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCccccc
Confidence            8654322      223445889999999999999999999999999986543  34689999999999999999999999


Q ss_pred             hhHHHhhhcccceeeHHhHHHH
Q 015748          368 VGPRVARAGPSVGIVVSFYEVV  389 (401)
Q Consensus       368 ~~~~l~r~~p~~~i~~~~ye~~  389 (401)
                      +.|+++|.+| .+++|.+||.+
T Consensus       272 ~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         272 AWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHHHHHHHHH-HHhhhhHhhcC
Confidence            9999999877 67899999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure