Citrus Sinensis ID: 015783

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
MALSSLQLQLQLQLQLLPPHPLNIASQKRHRFARFKTSSLSSINGALATRRRILPIVASAKAGAAASSSSSSLYATSTREIEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQQR
cccccHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccHHHHcccccHHHHHHcccccccccccccccccHHHHHcccccccccccccccHHHHHcccccEEccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHcccEEEcccccccccHHHHHHcHHHHHHccccccccEEEEccccccccccHHHHHHHcccccEEEEEccccccccccccccccccccccccccEEEEEccHHHHHHHHHHHHHHccEEcHHHHHHHHHHHHHHccccccccEEEEEEcccccccccHHHHHHHHHHHHHcccc
cHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccHHHHHHHHccccccccccccccccccccccccHHccccccccccccccHHHHHHHHHccccEEEEEcccccccccEEEEEcccccccEccHHHHHHHHHHHHHccccccccccEEEccccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHcHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccHHHccEEEEEcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHccccEEEEEcEccHHHcccHHHHccccHHHHcccc
MALSSLQLQLQLQlqllpphplniasqKRHRfarfktsslSSINGALATRRRILPIVASAKagaaasssssslyaTSTREiekeegndfhgvniaEDVTQLIGRTPMVYLNKVTEGCVGNVAAklesmepcrsvkdrigysmitdaeesgditpgktvlvepttgntglGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAeiiltdpekglrgaLDKAEEIvlntpnaymfqqFDNMANlkihfdstgpeiwedtlGCVDIFVAAigtggtitGTGRFLKMMNKEIkvvgvepaersvisgenagyvpsilDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFpsfgeryiptvLFRSIYEEVQNMQQR
MALSSLQLQLQLQLQLLPPHPLNIASQKRHRFARFKTSSLSSINGALATRRRILPIVASakagaaasssssslyATSTREIEkeegndfhgvniAEDVTQLIGRTPMVYLNKVTEGCVGNVaaklesmepcrSVKDRIGYSMItdaeesgditpGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAErsvisgenagyvpsILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISlarrpensgKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQQR
MAlsslqlqlqlqlqllPPHPLNIASQKRHRFARFKTSSLSSINGALATRRRILPIVasakagaaasssssslyatsTREIEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAigtggtitgtgRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEgllvgissgaaaaaaislaRRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQQR
*************LQL******************F******SINGALATRRRILPIVA*****************************DFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDA****DITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEE*******
******Q*QLQLQLQLLPPHP***********************************************************************NIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYE*V******
MALSSLQLQLQLQLQLLPPHPLNIASQKRHRFARFKTSSLSSINGALATRRRILPIVA**********************IEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQQR
**LSSLQLQLQLQLQLLPPHPLNIASQKRHRFARFKTSSLSSINGALATRRRILPI*AS****************************DFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQ*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MALSSLQLQLQLQLQLLPPHPLNIASQKRHRFARFKTSSLSSINGALATRRRILPIVASAKAGAAASSSSSSLYATSTREIEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQQR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query400 2.2.26 [Sep-21-2011]
O22682404 Probable cysteine synthas yes no 0.962 0.952 0.671 1e-136
P31300374 Cysteine synthase, chloro N/A no 0.795 0.850 0.660 1e-118
O81155386 Cysteine synthase, chloro N/A no 0.897 0.930 0.581 1e-117
P32260383 Cysteine synthase, chloro N/A no 0.775 0.809 0.646 1e-116
Q43725430 Cysteine synthase, mitoch no no 0.79 0.734 0.640 1e-115
P47999392 Cysteine synthase, chloro no no 0.772 0.788 0.658 1e-113
Q00834325 Cysteine synthase OS=Spin N/A no 0.76 0.935 0.633 1e-109
Q9XEA8325 Cysteine synthase OS=Oryz no no 0.767 0.944 0.640 1e-108
Q9XEA6321 Cysteine synthase OS=Oryz no no 0.767 0.956 0.640 1e-108
P38076325 Cysteine synthase OS=Trit N/A no 0.76 0.935 0.636 1e-108
>sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=1 SV=1 Back     alignment and function desciption
 Score =  485 bits (1249), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/396 (67%), Positives = 309/396 (78%), Gaps = 11/396 (2%)

Query: 14  LQLLPPHPLNIASQKRHRFARFKTS---SLSSINGALATRRRILPIVASAKAGAAASSSS 70
           L+LLP  PL   + K HRF+  K S        + +LA R  +   V  A +G +++ + 
Sbjct: 8   LRLLPQSPLGRITSKLHRFSTAKLSLFSFHHDSSSSLAVRTPVSSFVVGAISGKSSTGTK 67

Query: 71  SSLYATS--------TREIEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVA 122
           S              T   E++   +   VNIAEDVTQLIG TPMVYLN+VT+GC+ ++A
Sbjct: 68  SKSKTKRKPPPPPPVTTVAEEQHIAESETVNIAEDVTQLIGSTPMVYLNRVTDGCLADIA 127

Query: 123 AKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKL 182
           AKLESMEPCRSVKDRIG SMI +AE SG ITP KTVLVEPTTGNTGLGIAFVAA KGYKL
Sbjct: 128 AKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKL 187

Query: 183 IVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMAN 242
           IVTMPAS N+ERR+LLRA GAEI+LT+PEKGL+GA+DKA+EIVL T NAYMFQQFDN AN
Sbjct: 188 IVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTAN 247

Query: 243 LKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVI 302
            KIHF++TGPEIWEDT+G VDIFVA IGTGGT+TGTG FLKMMNK+IKVVGVEP+ERSVI
Sbjct: 248 TKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTVTGTGGFLKMMNKDIKVVGVEPSERSVI 307

Query: 303 SGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARR 362
           SG+N GY+P ILDV+LLDEV KV+N EA+ MARRLALEEGLLVGISSGAAA AA+SLA+R
Sbjct: 308 SGDNPGYLPGILDVKLLDEVFKVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKR 367

Query: 363 PENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQ 398
            EN+GKLI  +FPS GERYI T LF SI  EVQ M+
Sbjct: 368 AENAGKLITVLFPSHGERYITTALFSSINREVQEMR 403

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 4EC: 7
>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1 Back     alignment and function description
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2 Back     alignment and function description
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3 Back     alignment and function description
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2 Back     alignment and function description
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1 Back     alignment and function description
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1 Back     alignment and function description
>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2 Back     alignment and function description
>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
356571802371 PREDICTED: probable cysteine synthase, c 0.832 0.897 0.773 1e-140
357508933368 Cysteine synthase [Medicago truncatula] 0.817 0.888 0.776 1e-139
356506194372 PREDICTED: probable cysteine synthase, c 0.772 0.830 0.831 1e-138
297833036405 hypothetical protein ARALYDRAFT_896375 [ 0.962 0.950 0.677 1e-138
307136136369 cysteine synthase [Cucumis melo subsp. m 0.765 0.829 0.820 1e-138
356571800381 PREDICTED: probable cysteine synthase, c 0.832 0.874 0.751 1e-138
359480989390 PREDICTED: probable cysteine synthase, c 0.782 0.802 0.817 1e-138
449437666369 PREDICTED: probable cysteine synthase, c 0.765 0.829 0.810 1e-136
15228596404 cysteine synthase A [Arabidopsis thalian 0.962 0.952 0.671 1e-134
218189270392 hypothetical protein OsI_04195 [Oryza sa 0.907 0.926 0.690 1e-133
>gi|356571802|ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 2 [Glycine max] Back     alignment and taxonomy information
 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 263/340 (77%), Positives = 297/340 (87%), Gaps = 7/340 (2%)

Query: 58  ASAKAGAAASSSSSSLYATSTREIEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGC 117
           + ++  AA +  SS+    STR+        F  VNIAEDVTQLIG TPMVYLNKVTEGC
Sbjct: 39  SQSQHTAAKAKVSSAPLVYSTRQ-------GFDTVNIAEDVTQLIGNTPMVYLNKVTEGC 91

Query: 118 VGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAV 177
           V N+AAKLESMEPCRSVKDRIGYSM++DAEE G I+PGKT+LVEPTTGNTGLGIAFVAA 
Sbjct: 92  VANIAAKLESMEPCRSVKDRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGIAFVAAT 151

Query: 178 KGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQF 237
           KGYKLIVTMPAS N+ERRILLRAFGAE++LTD EKGL+GA+DKAEEIV NTPNAYMF+QF
Sbjct: 152 KGYKLIVTMPASINVERRILLRAFGAEVVLTDAEKGLKGAVDKAEEIVRNTPNAYMFRQF 211

Query: 238 DNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPA 297
           DNM N KIHF++TGPEIWEDT+G VD+ VA IGTGGT+TGTGR+LKMMNK IKVVGVEPA
Sbjct: 212 DNMTNTKIHFETTGPEIWEDTMGNVDVLVAGIGTGGTVTGTGRYLKMMNKNIKVVGVEPA 271

Query: 298 ERSVISGENAGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAI 357
           +RSV+SG++ G++PSILD++LLDEVIKVTN EAV MARRLAL+EGLLVGISSGAAAAAAI
Sbjct: 272 DRSVVSGDSPGFMPSILDIKLLDEVIKVTNVEAVEMARRLALKEGLLVGISSGAAAAAAI 331

Query: 358 SLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNM 397
           +LARRPE+SGKLI  IFPSFGERYI T LF SIYEEVQ M
Sbjct: 332 NLARRPEHSGKLIVVIFPSFGERYISTALFHSIYEEVQKM 371

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357508933|ref|XP_003624755.1| Cysteine synthase [Medicago truncatula] gi|355499770|gb|AES80973.1| Cysteine synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356506194|ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297833036|ref|XP_002884400.1| hypothetical protein ARALYDRAFT_896375 [Arabidopsis lyrata subsp. lyrata] gi|297330240|gb|EFH60659.1| hypothetical protein ARALYDRAFT_896375 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|307136136|gb|ADN33981.1| cysteine synthase [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|356571800|ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|359480989|ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chloroplastic-like [Vitis vinifera] gi|296085861|emb|CBI31185.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449437666|ref|XP_004136612.1| PREDICTED: probable cysteine synthase, chloroplastic-like [Cucumis sativus] gi|449523732|ref|XP_004168877.1| PREDICTED: probable cysteine synthase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15228596|ref|NP_187013.1| cysteine synthase A [Arabidopsis thaliana] gi|11131558|sp|O22682.1|CYSK4_ARATH RecName: Full=Probable cysteine synthase, chloroplastic; Short=CSase; AltName: Full=CS26; AltName: Full=O-acetylserine (thiol)-lyase; Short=OAS-TL; AltName: Full=O-acetylserine sulfhydrylase; Flags: Precursor gi|6091759|gb|AAF03469.1|AC009327_8 O-acetylserine (thiol) lyase [Arabidopsis thaliana] gi|2281780|dbj|BAA21628.1| O-acetylserine (thiol) lyase [Arabidopsis thaliana] gi|20466215|gb|AAM20425.1| O-acetylserine (thiol) lyase [Arabidopsis thaliana] gi|25084065|gb|AAN72166.1| O-acetylserine (thiol) lyase [Arabidopsis thaliana] gi|332640444|gb|AEE73965.1| cysteine synthase A [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|218189270|gb|EEC71697.1| hypothetical protein OsI_04195 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
TAIR|locus:2096454404 CS26 "cysteine synthase 26" [A 0.952 0.943 0.596 8.4e-113
TAIR|locus:2080417433 OASC "O-acetylserine (thiol) l 0.79 0.729 0.560 4.1e-97
TAIR|locus:2043964392 OASB "O-acetylserine (thiol) l 0.79 0.806 0.567 6.8e-95
TAIR|locus:2130419322 OASA1 "O-acetylserine (thiol) 0.76 0.944 0.550 1.9e-90
UNIPROTKB|Q1KLZ2376 CAS1 "L-3-cyanoalanine synthas 0.777 0.827 0.498 9.1e-84
UNIPROTKB|Q76MX2351 PCAS-1 "Bifunctional L-3-cyano 0.77 0.877 0.5 5e-83
UNIPROTKB|Q43153368 CYSC "Bifunctional L-3-cyanoal 0.775 0.842 0.490 1.7e-82
TAIR|locus:2114804324 CYSD1 "cysteine synthase D1" [ 0.762 0.941 0.514 1.2e-81
UNIPROTKB|Q1KLZ1375 CAS2 "L-3-cyanoalanine synthas 0.777 0.829 0.489 4.1e-81
TAIR|locus:2143814323 CYSD2 "cysteine synthase D2" [ 0.76 0.941 0.506 1.1e-78
TAIR|locus:2096454 CS26 "cysteine synthase 26" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
 Identities = 234/392 (59%), Positives = 269/392 (68%)

Query:    18 PPHPLNIASQKRHRFARFKTSSLS---SINGALATRRRILPIVXXXXXXXXXXXXXXXXX 74
             P  PL   + K HRF+  K S  S     + +LA R  +   V                 
Sbjct:    12 PQSPLGRITSKLHRFSTAKLSLFSFHHDSSSSLAVRTPVSSFVVGAISGKSSTGTKSKSK 71

Query:    75 XXX--------TREIEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLE 126
                        T   E++   +   VNIAEDVTQLIG TPMVYLN+VT+GC+ ++AAKLE
Sbjct:    72 TKRKPPPPPPVTTVAEEQHIAESETVNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLE 131

Query:   127 SMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTM 186
             SMEPCRSVKDRIG SMI +AE SG ITP KTVLVEPTTGNTGLGIAFVAA KGYKLIVTM
Sbjct:   132 SMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTM 191

Query:   187 PASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIH 246
             PAS N+ERR+LLRA GAEI+LT+PEKGL+GA+DKA+EIVL T NAYMFQQFDN AN KIH
Sbjct:   192 PASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIH 251

Query:   247 FDSTGPEIWEDTLGCVDIFVAAXXXXXXXXXXXRFLKMMNKEIKVVGVEPAERSVISGEN 306
             F++TGPEIWEDT+G VDIFVA             FLKMMNK+IKVVGVEP+ERSVISG+N
Sbjct:   252 FETTGPEIWEDTMGNVDIFVAGIGTGGTVTGTGGFLKMMNKDIKVVGVEPSERSVISGDN 311

Query:   307 AGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEXXXXXXXXXXXXXXXXXXXRRPENS 366
              GY+P ILDV+LLDEV KV+N EA+ MARRLALEE                   +R EN+
Sbjct:   312 PGYLPGILDVKLLDEVFKVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKRAENA 371

Query:   367 GKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQ 398
             GKLI  +FPS GERYI T LF SI  EVQ M+
Sbjct:   372 GKLITVLFPSHGERYITTALFSSINREVQEMR 403
GO:0003824 "catalytic activity" evidence=IEA
GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA
GO:0005739 "mitochondrion" evidence=ISM
GO:0019344 "cysteine biosynthetic process" evidence=ISS
GO:0030170 "pyridoxal phosphate binding" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=IMP
GO:0015979 "photosynthesis" evidence=IMP
GO:0090322 "regulation of superoxide metabolic process" evidence=IMP
GO:0009643 "photosynthetic acclimation" evidence=IMP
GO:0031977 "thylakoid lumen" evidence=IDA
TAIR|locus:2080417 OASC "O-acetylserine (thiol) lyase isoform C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043964 OASB "O-acetylserine (thiol) lyase B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130419 OASA1 "O-acetylserine (thiol) lyase (OAS-TL) isoform A1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q1KLZ2 CAS1 "L-3-cyanoalanine synthase 1, mitochondrial" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms
UNIPROTKB|Q76MX2 PCAS-1 "Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial" [Solanum tuberosum (taxid:4113)] Back     alignment and assigned GO terms
UNIPROTKB|Q43153 CYSC "Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial" [Spinacia oleracea (taxid:3562)] Back     alignment and assigned GO terms
TAIR|locus:2114804 CYSD1 "cysteine synthase D1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q1KLZ1 CAS2 "L-3-cyanoalanine synthase 2, mitochondrial" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms
TAIR|locus:2143814 CYSD2 "cysteine synthase D2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P0A535CYSK_MYCBO2, ., 5, ., 1, ., 4, 70.52090.750.9677yesno
P0A534CYSK_MYCTU2, ., 5, ., 1, ., 4, 70.52090.750.9677yesno
O81155CYSKP_SOLTU2, ., 5, ., 1, ., 4, 70.58180.89750.9300N/Ano
O32978CYSK_MYCLE2, ., 5, ., 1, ., 4, 70.53920.73750.9516yesno
Q1KLZ2CAS1_MALDO4, ., 4, ., 1, ., 90.51720.88250.9388N/Ano
Q76MX2CAS1_SOLTU4, ., 4, ., 1, ., 90.54410.8150.9287N/Ano
O22682CYSK4_ARATH2, ., 5, ., 1, ., 4, 70.67170.96250.9529yesno
Q7DDL5CYSK_NEIMB2, ., 5, ., 1, ., 4, 70.51140.73750.9516yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.3.1LOW CONFIDENCE prediction!
4th Layer2.5.1.470.946
3rd Layer2.5.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
PLN02565322 PLN02565, PLN02565, cysteine synthase 1e-160
PLN02556368 PLN02556, PLN02556, cysteine synthase/L-3-cyanoala 1e-147
TIGR01136299 TIGR01136, cysKM, cysteine synthase 1e-147
PLN03013429 PLN03013, PLN03013, cysteine synthase 1e-144
TIGR01139298 TIGR01139, cysK, cysteine synthase A 1e-139
PLN00011323 PLN00011, PLN00011, cysteine synthase 1e-138
cd01561291 cd01561, CBS_like, CBS_like: This subgroup include 1e-129
COG0031300 COG0031, CysK, Cysteine synthase [Amino acid trans 1e-128
PRK10717330 PRK10717, PRK10717, cysteine synthase A; Provision 6e-99
PRK11761296 PRK11761, cysM, cysteine synthase B; Provisional 2e-98
TIGR01138290 TIGR01138, cysM, cysteine synthase B 5e-91
TIGR01137 454 TIGR01137, cysta_beta, cystathionine beta-synthase 2e-86
cd00640244 cd00640, Trp-synth-beta_II, Tryptophan synthase be 3e-76
TIGR03945304 TIGR03945, PLP_SbnA_fam, 2,3-diaminopropionate bio 1e-67
pfam00291295 pfam00291, PALP, Pyridoxal-phosphate dependent enz 3e-61
PLN02356423 PLN02356, PLN02356, phosphateglycerate kinase 5e-31
COG1171347 COG1171, IlvA, Threonine dehydratase [Amino acid t 2e-23
cd01562304 cd01562, Thr-dehyd, Threonine dehydratase: The fir 2e-19
TIGR01127380 TIGR01127, ilvA_1Cterm, threonine ammonia-lyase, m 1e-17
cd01563324 cd01563, Thr-synth_1, Threonine synthase is a pyri 1e-14
PRK08638333 PRK08638, PRK08638, threonine dehydratase; Validat 2e-12
PRK06382406 PRK06382, PRK06382, threonine dehydratase; Provisi 1e-11
COG0498411 COG0498, ThrC, Threonine synthase [Amino acid tran 1e-10
PRK08198404 PRK08198, PRK08198, threonine dehydratase; Provisi 4e-10
TIGR02079 409 TIGR02079, THD1, threonine dehydratase 2e-09
PRK08526403 PRK08526, PRK08526, threonine dehydratase; Provisi 2e-09
PRK06815317 PRK06815, PRK06815, hypothetical protein; Provisio 4e-09
PRK08639 420 PRK08639, PRK08639, threonine dehydratase; Validat 7e-09
TIGR01124 499 TIGR01124, ilvA_2Cterm, threonine ammonia-lyase, b 1e-08
PRK05638442 PRK05638, PRK05638, threonine synthase; Validated 3e-08
PRK12483 521 PRK12483, PRK12483, threonine dehydratase; Reviewe 1e-07
PRK09224 504 PRK09224, PRK09224, threonine dehydratase; Reviewe 1e-06
PRK08246310 PRK08246, PRK08246, threonine dehydratase; Provisi 3e-06
TIGR02991317 TIGR02991, ectoine_eutB, ectoine utilization prote 6e-06
PRK06381319 PRK06381, PRK06381, threonine synthase; Validated 2e-05
COG0604326 COG0604, Qor, NADPH:quinone reductase and related 4e-05
PRK06721352 PRK06721, PRK06721, threonine synthase; Reviewed 5e-05
TIGR03528396 TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammoni 5e-05
PRK06608338 PRK06608, PRK06608, threonine dehydratase; Provisi 1e-04
PLN02550 591 PLN02550, PLN02550, threonine dehydratase 2e-04
TIGR00260328 TIGR00260, thrC, threonine synthase 3e-04
cd06448316 cd06448, L-Ser-dehyd, Serine dehydratase is a pyri 4e-04
TIGR01747376 TIGR01747, diampropi_NH3ly, diaminopropionate ammo 5e-04
cd06446365 cd06446, Trp-synth_B, Tryptophan synthase-beta: Tr 7e-04
PRK06260397 PRK06260, PRK06260, threonine synthase; Validated 0.001
PRK08329347 PRK08329, PRK08329, threonine synthase; Validated 0.001
cd05188271 cd05188, MDR, Medium chain reductase/dehydrogenase 0.003
PRK08206399 PRK08206, PRK08206, diaminopropionate ammonia-lyas 0.003
PRK06352351 PRK06352, PRK06352, threonine synthase; Validated 0.003
PRK07048321 PRK07048, PRK07048, serine/threonine dehydratase; 0.003
PRK08197394 PRK08197, PRK08197, threonine synthase; Validated 0.004
PLN02970328 PLN02970, PLN02970, serine racemase 0.004
>gnl|CDD|166206 PLN02565, PLN02565, cysteine synthase Back     alignment and domain information 
 Score =  453 bits (1168), Expect = e-160
 Identities = 205/314 (65%), Positives = 259/314 (82%), Gaps = 10/314 (3%)

Query: 94  IAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDIT 153
           IA+DVT+LIG+TP+VYLN V +GCV  +AAKLE MEPC SVKDRIGYSMITDAEE G I 
Sbjct: 5   IAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDAEEKGLIK 64

Query: 154 PGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKG 213
           PG++VL+EPT+GNTG+G+AF+AA KGYKLI+TMPAS +LERRI+L AFGAE++LTDP KG
Sbjct: 65  PGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPAKG 124

Query: 214 LRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGG 273
           ++GA+ KAEEI+  TPN+Y+ QQF+N AN KIH+++TGPEIW+ T G VD FV+ IGTGG
Sbjct: 125 MKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPEIWKGTGGKVDAFVSGIGTGG 184

Query: 274 TITGTGRFLKMMNKEIKVVGVEPAERSVISGEN----------AGYVPSILDVQLLDEVI 323
           TITG G++LK  N +IK+ GVEP E +V+SG            AG++P +LDV LLDEV+
Sbjct: 185 TITGAGKYLKEQNPDIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVDLLDEVV 244

Query: 324 KVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIP 383
           +V++DEA+  A+ LAL+EGLLVGISSGAAAAAAI +A+RPEN+GKLI  IFPSFGERY+ 
Sbjct: 245 QVSSDEAIETAKLLALKEGLLVGISSGAAAAAAIKIAKRPENAGKLIVVIFPSFGERYLS 304

Query: 384 TVLFRSIYEEVQNM 397
           +VLF S+ +E +NM
Sbjct: 305 SVLFESVKKEAENM 318

Length = 322
>gnl|CDD|178171 PLN02556, PLN02556, cysteine synthase/L-3-cyanoalanine synthase Back     alignment and domain information
>gnl|CDD|233286 TIGR01136, cysKM, cysteine synthase Back     alignment and domain information
>gnl|CDD|178587 PLN03013, PLN03013, cysteine synthase Back     alignment and domain information
>gnl|CDD|233288 TIGR01139, cysK, cysteine synthase A Back     alignment and domain information
>gnl|CDD|177651 PLN00011, PLN00011, cysteine synthase Back     alignment and domain information
>gnl|CDD|107204 cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase Back     alignment and domain information
>gnl|CDD|223110 COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|182672 PRK10717, PRK10717, cysteine synthase A; Provisional Back     alignment and domain information
>gnl|CDD|236972 PRK11761, cysM, cysteine synthase B; Provisional Back     alignment and domain information
>gnl|CDD|130208 TIGR01138, cysM, cysteine synthase B Back     alignment and domain information
>gnl|CDD|233287 TIGR01137, cysta_beta, cystathionine beta-synthase Back     alignment and domain information
>gnl|CDD|107202 cd00640, Trp-synth-beta_II, Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions Back     alignment and domain information
>gnl|CDD|234409 TIGR03945, PLP_SbnA_fam, 2,3-diaminopropionate biosynthesis protein SbnA Back     alignment and domain information
>gnl|CDD|215840 pfam00291, PALP, Pyridoxal-phosphate dependent enzyme Back     alignment and domain information
>gnl|CDD|215204 PLN02356, PLN02356, phosphateglycerate kinase Back     alignment and domain information
>gnl|CDD|224092 COG1171, IlvA, Threonine dehydratase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|107205 cd01562, Thr-dehyd, Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen Back     alignment and domain information
>gnl|CDD|130197 TIGR01127, ilvA_1Cterm, threonine ammonia-lyase, medium form Back     alignment and domain information
>gnl|CDD|107206 cd01563, Thr-synth_1, Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate Back     alignment and domain information
>gnl|CDD|236317 PRK08638, PRK08638, threonine dehydratase; Validated Back     alignment and domain information
>gnl|CDD|180550 PRK06382, PRK06382, threonine dehydratase; Provisional Back     alignment and domain information
>gnl|CDD|223572 COG0498, ThrC, Threonine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|236182 PRK08198, PRK08198, threonine dehydratase; Provisional Back     alignment and domain information
>gnl|CDD|233712 TIGR02079, THD1, threonine dehydratase Back     alignment and domain information
>gnl|CDD|181457 PRK08526, PRK08526, threonine dehydratase; Provisional Back     alignment and domain information
>gnl|CDD|180709 PRK06815, PRK06815, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236318 PRK08639, PRK08639, threonine dehydratase; Validated Back     alignment and domain information
>gnl|CDD|130194 TIGR01124, ilvA_2Cterm, threonine ammonia-lyase, biosynthetic, long form Back     alignment and domain information
>gnl|CDD|235539 PRK05638, PRK05638, threonine synthase; Validated Back     alignment and domain information
>gnl|CDD|237111 PRK12483, PRK12483, threonine dehydratase; Reviewed Back     alignment and domain information
>gnl|CDD|236417 PRK09224, PRK09224, threonine dehydratase; Reviewed Back     alignment and domain information
>gnl|CDD|181319 PRK08246, PRK08246, threonine dehydratase; Provisional Back     alignment and domain information
>gnl|CDD|132036 TIGR02991, ectoine_eutB, ectoine utilization protein EutB Back     alignment and domain information
>gnl|CDD|235789 PRK06381, PRK06381, threonine synthase; Validated Back     alignment and domain information
>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] Back     alignment and domain information
>gnl|CDD|136018 PRK06721, PRK06721, threonine synthase; Reviewed Back     alignment and domain information
>gnl|CDD|234245 TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammonia-lyase Back     alignment and domain information
>gnl|CDD|235842 PRK06608, PRK06608, threonine dehydratase; Provisional Back     alignment and domain information
>gnl|CDD|178165 PLN02550, PLN02550, threonine dehydratase Back     alignment and domain information
>gnl|CDD|232896 TIGR00260, thrC, threonine synthase Back     alignment and domain information
>gnl|CDD|107209 cd06448, L-Ser-dehyd, Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia Back     alignment and domain information
>gnl|CDD|130808 TIGR01747, diampropi_NH3ly, diaminopropionate ammonia-lyase family Back     alignment and domain information
>gnl|CDD|107207 cd06446, Trp-synth_B, Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions Back     alignment and domain information
>gnl|CDD|235757 PRK06260, PRK06260, threonine synthase; Validated Back     alignment and domain information
>gnl|CDD|236244 PRK08329, PRK08329, threonine synthase; Validated Back     alignment and domain information
>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family Back     alignment and domain information
>gnl|CDD|236186 PRK08206, PRK08206, diaminopropionate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|180539 PRK06352, PRK06352, threonine synthase; Validated Back     alignment and domain information
>gnl|CDD|235918 PRK07048, PRK07048, serine/threonine dehydratase; Validated Back     alignment and domain information
>gnl|CDD|181283 PRK08197, PRK08197, threonine synthase; Validated Back     alignment and domain information
>gnl|CDD|215524 PLN02970, PLN02970, serine racemase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 400
PLN02565322 cysteine synthase 100.0
PLN02556368 cysteine synthase/L-3-cyanoalanine synthase 100.0
COG0031300 CysK Cysteine synthase [Amino acid transport and m 100.0
PLN03013429 cysteine synthase 100.0
PLN00011323 cysteine synthase 100.0
TIGR01136299 cysKM cysteine synthases. This model discriminates 100.0
PRK11761296 cysM cysteine synthase B; Provisional 100.0
TIGR01138290 cysM cysteine synthase B. Alternate name: O-acetyl 100.0
PRK10717330 cysteine synthase A; Provisional 100.0
TIGR01139298 cysK cysteine synthase A. This model distinguishes 100.0
KOG1252362 consensus Cystathionine beta-synthase and related 100.0
PRK12391427 tryptophan synthase subunit beta; Reviewed 100.0
PLN02356423 phosphateglycerate kinase 100.0
PRK06352351 threonine synthase; Validated 100.0
PRK07591421 threonine synthase; Validated 100.0
PRK08197394 threonine synthase; Validated 100.0
TIGR01415419 trpB_rel pyridoxal-phosphate dependent TrpB-like e 100.0
cd01561291 CBS_like CBS_like: This subgroup includes Cystathi 100.0
PRK06721352 threonine synthase; Reviewed 100.0
TIGR01137 454 cysta_beta cystathionine beta-synthase. Members of 100.0
PRK12483 521 threonine dehydratase; Reviewed 100.0
COG1171347 IlvA Threonine dehydratase [Amino acid transport a 100.0
PRK07409353 threonine synthase; Validated 100.0
PRK06260397 threonine synthase; Validated 100.0
PRK08526403 threonine dehydratase; Provisional 100.0
PLN02569484 threonine synthase 100.0
PRK06382406 threonine dehydratase; Provisional 100.0
PRK08329347 threonine synthase; Validated 100.0
PLN02970328 serine racemase 100.0
PRK08198404 threonine dehydratase; Provisional 100.0
TIGR02079409 THD1 threonine dehydratase. This model represents 100.0
PRK08638333 threonine dehydratase; Validated 100.0
PRK06608338 threonine dehydratase; Provisional 100.0
PRK13028402 tryptophan synthase subunit beta; Provisional 100.0
PRK07476322 eutB threonine dehydratase; Provisional 100.0
TIGR01124 499 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, 100.0
PRK04346397 tryptophan synthase subunit beta; Validated 100.0
PLN02550 591 threonine dehydratase 100.0
PRK08639420 threonine dehydratase; Validated 100.0
cd01563324 Thr-synth_1 Threonine synthase is a pyridoxal phos 100.0
TIGR02991317 ectoine_eutB ectoine utilization protein EutB. Mem 100.0
PRK07334403 threonine dehydratase; Provisional 100.0
PRK06110322 hypothetical protein; Provisional 100.0
PRK09224 504 threonine dehydratase; Reviewed 100.0
cd06448316 L-Ser-dehyd Serine dehydratase is a pyridoxal phos 100.0
TIGR01127380 ilvA_1Cterm threonine dehydratase, medium form. A 100.0
PRK07048321 serine/threonine dehydratase; Validated 100.0
PRK05638442 threonine synthase; Validated 100.0
PRK02991441 D-serine dehydratase; Provisional 100.0
COG1350432 Predicted alternative tryptophan synthase beta-sub 100.0
PLN02618410 tryptophan synthase, beta chain 100.0
PRK06815317 hypothetical protein; Provisional 100.0
cd01562304 Thr-dehyd Threonine dehydratase: The first step in 100.0
PRK08813349 threonine dehydratase; Provisional 100.0
PRK06450338 threonine synthase; Validated 100.0
PRK08246310 threonine dehydratase; Provisional 100.0
PRK06381319 threonine synthase; Validated 100.0
PRK13802695 bifunctional indole-3-glycerol phosphate synthase/ 100.0
TIGR00260328 thrC threonine synthase. Involved in threonine bio 100.0
cd06447404 D-Ser-dehyd D-Serine dehydratase is a pyridoxal ph 100.0
TIGR00263385 trpB tryptophan synthase, beta subunit. Tryptophan 100.0
TIGR02035431 D_Ser_am_lyase D-serine ammonia-lyase. This family 100.0
PRK08206399 diaminopropionate ammonia-lyase; Provisional 100.0
KOG1250457 consensus Threonine/serine dehydratases [Amino aci 100.0
cd06446365 Trp-synth_B Tryptophan synthase-beta: Trptophan sy 100.0
TIGR03844398 cysteate_syn cysteate synthase. Members of this fa 100.0
PRK13803610 bifunctional phosphoribosylanthranilate isomerase/ 100.0
cd00640244 Trp-synth-beta_II Tryptophan synthase beta superfa 100.0
TIGR01747376 diampropi_NH3ly diaminopropionate ammonia-lyase fa 100.0
COG0133396 TrpB Tryptophan synthase beta chain [Amino acid tr 100.0
KOG1481391 consensus Cysteine synthase [Amino acid transport 100.0
TIGR03528396 2_3_DAP_am_ly diaminopropionate ammonia-lyase. Mem 100.0
KOG1251323 consensus Serine racemase [Signal transduction mec 100.0
PF00291306 PALP: Pyridoxal-phosphate dependent enzyme; InterP 100.0
KOG1395477 consensus Tryptophan synthase beta chain [Amino ac 100.0
PRK03910331 D-cysteine desulfhydrase; Validated 100.0
TIGR01275311 ACC_deam_rel pyridoxal phosphate-dependent enzymes 100.0
cd06449307 ACCD Aminocyclopropane-1-carboxylate deaminase (AC 100.0
PRK12390337 1-aminocyclopropane-1-carboxylate deaminase; Provi 100.0
TIGR01274337 ACC_deam 1-aminocyclopropane-1-carboxylate deamina 100.0
COG0498411 ThrC Threonine synthase [Amino acid transport and 100.0
PRK14045329 1-aminocyclopropane-1-carboxylate deaminase; Provi 100.0
PRK09225462 threonine synthase; Validated 100.0
cd01560460 Thr-synth_2 Threonine synthase catalyzes the final 100.0
COG2515323 Acd 1-aminocyclopropane-1-carboxylate deaminase [A 99.97
COG3048443 DsdA D-serine dehydratase [Amino acid transport an 99.93
KOG2616266 consensus Pyridoxalphosphate-dependent enzyme/pred 94.86
PF00107130 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: 86.79
PF03808172 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/Cp 84.17
COG0800211 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Ca 82.64
COG1063350 Tdh Threonine dehydrogenase and related Zn-depende 82.6
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 80.93
>PLN02565 cysteine synthase Back     alignment and domain information 
Probab=100.00  E-value=2.4e-63  Score=487.02  Aligned_cols=303  Identities=67%  Similarity=1.109  Sum_probs=276.3

Q ss_pred             HHHhhcccCCCCceecccccccCCCeEEEEeCCCCCCCcchhhhHHHHHHHHHHcCCCCCCCcEEEEeCCChHHHHHHHH
Q 015783           95 AEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFV  174 (400)
Q Consensus        95 ~~~v~~~~~~TPL~~~~~l~~~lg~~i~~K~E~~nptGSfK~Rga~~~~~~a~~~G~~~~g~~~vv~assGN~g~AlA~a  174 (400)
                      .+.++..+++|||++++.++...|.+||+|+|++|||||||||+|.+++..+.+.|.+.+|.+.|+++|+||||.|+|++
T Consensus         6 ~~~~~~~ig~TPLv~l~~l~~~~~~~i~~K~E~~nPtGSfKdR~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~   85 (322)
T PLN02565          6 AKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFM   85 (322)
T ss_pred             hhhHHHHhCCCceEEccccCCCCCceEEEEecccCCccchHHHHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHH
Confidence            34688899999999999887666789999999999999999999999999999999887876789999999999999999


Q ss_pred             HHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHHHHhCCCceeeCCCCChHHHHHHHHhHHHHH
Q 015783          175 AAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEI  254 (400)
Q Consensus       175 a~~~Gl~~~Vvvp~~~~~~~~~~l~~~GA~V~~~~~~~~~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~g~~ti~~Ei  254 (400)
                      |+.+|++|+||||+++++.|+.+|+.|||+|+.++...+++++++.|.+++++.++.++++||+|+.|+..||+|+|+||
T Consensus        86 a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~q~~n~~n~~~~~~t~a~Ei  165 (322)
T PLN02565         86 AAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPEI  165 (322)
T ss_pred             HHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCCCcEeecccCCHhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998765567889999998887667899999999998878999999999


Q ss_pred             HhhhCCCCCEEEEecCCChhHHhHHHHHHhcCCCcEEEEEeCCCCccccCCCC----------CCCchhhhhhccCeEEE
Q 015783          255 WEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENA----------GYVPSILDVQLLDEVIK  324 (400)
Q Consensus       255 ~~Ql~~~pD~vv~pvG~Gg~~aGi~~~~k~~~~~~rvi~Vep~~~~~l~~g~~----------~~~~~~l~~~~~~~~~~  324 (400)
                      ++|++++||+||+|+|+||+++|++.+||++++++|||+|||++|+++..+.+          +..++.+..+.+|+++.
T Consensus       166 ~~q~~~~~d~vv~~vG~GG~l~Gi~~~lk~~~p~~kvi~Vep~~s~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd~~v~  245 (322)
T PLN02565        166 WKGTGGKVDAFVSGIGTGGTITGAGKYLKEQNPDIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVDLLDEVVQ  245 (322)
T ss_pred             HHhcCCCCCEEEEcCCchHHHHHHHHHHHHhCCCCEEEEEecCCCccccCCCCCCccCCCCCCCCCCCcCCHhHCCEEEE
Confidence            99997689999999999999999999999999999999999999988765433          12344455677899999


Q ss_pred             eCHHHHHHHHHHHHHHcCCeeehhHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCChhHHhhHHHHHHhccc
Q 015783          325 VTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNM  397 (400)
Q Consensus       325 V~d~e~~~a~~~la~~eGi~~~p~sgaa~aaa~~l~~~~~~~~~~vVvl~t~~G~k~~~~~~~~~~~~~~~~~  397 (400)
                      |+|+|+++++++|++++|+++||+||++++++++++++...++++||+|+||+|.||+++++|+.+..+.++|
T Consensus       246 V~d~ea~~a~~~l~~~~gi~vg~ssga~laaa~~~a~~~~~~~~~vV~v~~d~G~ky~~~~~~~~~~~~~~~~  318 (322)
T PLN02565        246 VSSDEAIETAKLLALKEGLLVGISSGAAAAAAIKIAKRPENAGKLIVVIFPSFGERYLSSVLFESVKKEAENM  318 (322)
T ss_pred             ECHHHHHHHHHHHHHHhCcEEeccHHHHHHHHHHHHHhcCCCCCeEEEEECCCccccCCchhhHHHHHHHhcC
Confidence            9999999999999999999999999999999999997765568899999999999999999999999998887

>PLN02556 cysteine synthase/L-3-cyanoalanine synthase Back     alignment and domain information
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN03013 cysteine synthase Back     alignment and domain information
>PLN00011 cysteine synthase Back     alignment and domain information
>TIGR01136 cysKM cysteine synthases Back     alignment and domain information
>PRK11761 cysM cysteine synthase B; Provisional Back     alignment and domain information
>TIGR01138 cysM cysteine synthase B Back     alignment and domain information
>PRK10717 cysteine synthase A; Provisional Back     alignment and domain information
>TIGR01139 cysK cysteine synthase A Back     alignment and domain information
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12391 tryptophan synthase subunit beta; Reviewed Back     alignment and domain information
>PLN02356 phosphateglycerate kinase Back     alignment and domain information
>PRK06352 threonine synthase; Validated Back     alignment and domain information
>PRK07591 threonine synthase; Validated Back     alignment and domain information
>PRK08197 threonine synthase; Validated Back     alignment and domain information
>TIGR01415 trpB_rel pyridoxal-phosphate dependent TrpB-like enzyme Back     alignment and domain information
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase Back     alignment and domain information
>PRK06721 threonine synthase; Reviewed Back     alignment and domain information
>TIGR01137 cysta_beta cystathionine beta-synthase Back     alignment and domain information
>PRK12483 threonine dehydratase; Reviewed Back     alignment and domain information
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07409 threonine synthase; Validated Back     alignment and domain information
>PRK06260 threonine synthase; Validated Back     alignment and domain information
>PRK08526 threonine dehydratase; Provisional Back     alignment and domain information
>PLN02569 threonine synthase Back     alignment and domain information
>PRK06382 threonine dehydratase; Provisional Back     alignment and domain information
>PRK08329 threonine synthase; Validated Back     alignment and domain information
>PLN02970 serine racemase Back     alignment and domain information
>PRK08198 threonine dehydratase; Provisional Back     alignment and domain information
>TIGR02079 THD1 threonine dehydratase Back     alignment and domain information
>PRK08638 threonine dehydratase; Validated Back     alignment and domain information
>PRK06608 threonine dehydratase; Provisional Back     alignment and domain information
>PRK13028 tryptophan synthase subunit beta; Provisional Back     alignment and domain information
>PRK07476 eutB threonine dehydratase; Provisional Back     alignment and domain information
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form Back     alignment and domain information
>PRK04346 tryptophan synthase subunit beta; Validated Back     alignment and domain information
>PLN02550 threonine dehydratase Back     alignment and domain information
>PRK08639 threonine dehydratase; Validated Back     alignment and domain information
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate Back     alignment and domain information
>TIGR02991 ectoine_eutB ectoine utilization protein EutB Back     alignment and domain information
>PRK07334 threonine dehydratase; Provisional Back     alignment and domain information
>PRK06110 hypothetical protein; Provisional Back     alignment and domain information
>PRK09224 threonine dehydratase; Reviewed Back     alignment and domain information
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia Back     alignment and domain information
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form Back     alignment and domain information
>PRK07048 serine/threonine dehydratase; Validated Back     alignment and domain information
>PRK05638 threonine synthase; Validated Back     alignment and domain information
>PRK02991 D-serine dehydratase; Provisional Back     alignment and domain information
>COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) [General function prediction only] Back     alignment and domain information
>PLN02618 tryptophan synthase, beta chain Back     alignment and domain information
>PRK06815 hypothetical protein; Provisional Back     alignment and domain information
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen Back     alignment and domain information
>PRK08813 threonine dehydratase; Provisional Back     alignment and domain information
>PRK06450 threonine synthase; Validated Back     alignment and domain information
>PRK08246 threonine dehydratase; Provisional Back     alignment and domain information
>PRK06381 threonine synthase; Validated Back     alignment and domain information
>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional Back     alignment and domain information
>TIGR00260 thrC threonine synthase Back     alignment and domain information
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia Back     alignment and domain information
>TIGR00263 trpB tryptophan synthase, beta subunit Back     alignment and domain information
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase Back     alignment and domain information
>PRK08206 diaminopropionate ammonia-lyase; Provisional Back     alignment and domain information
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism] Back     alignment and domain information
>cd06446 Trp-synth_B Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions Back     alignment and domain information
>TIGR03844 cysteate_syn cysteate synthase Back     alignment and domain information
>PRK13803 bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta; Provisional Back     alignment and domain information
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions Back     alignment and domain information
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family Back     alignment and domain information
>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1481 consensus Cysteine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase Back     alignment and domain information
>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism] Back     alignment and domain information
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal) Back     alignment and domain information
>KOG1395 consensus Tryptophan synthase beta chain [Amino acid transport and metabolism] Back     alignment and domain information
>PRK03910 D-cysteine desulfhydrase; Validated Back     alignment and domain information
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family Back     alignment and domain information
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia Back     alignment and domain information
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional Back     alignment and domain information
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase Back     alignment and domain information
>COG0498 ThrC Threonine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional Back     alignment and domain information
>PRK09225 threonine synthase; Validated Back     alignment and domain information
>cd01560 Thr-synth_2 Threonine synthase catalyzes the final step of threonine biosynthesis Back     alignment and domain information
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism] Back     alignment and domain information
>COG3048 DsdA D-serine dehydratase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2616 consensus Pyridoxalphosphate-dependent enzyme/predicted threonine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 Back     alignment and domain information
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli Back     alignment and domain information
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
4aec_A430 Crystal Structure Of The Arabidopsis Thaliana O-Ace 1e-108
1z7w_A322 Crystal Structure Of O-Acetylserine Sulfhydrylase F 1e-100
2isq_A320 Crystal Structure Of O-Acetylserine Sulfhydrylase F 1e-100
1z7y_A322 Crystal Structure Of The Arabidopsis Thaliana O-Ace 1e-100
3vbe_A344 Crystal Structure Of Beta-Cyanoalanine Synthase In 2e-93
3vc3_A344 Crystal Structure Of Beta-Cyanoalanine Synthase K95 9e-93
2q3d_A313 2.2 A Resolution Crystal Structure Of O-acetylserin 2e-71
3rr2_A314 Structure Of A Cysteine Synthase (O-Acetylserine Su 3e-71
2q3b_A313 1.8 A Resolution Crystal Structure Of O-Acetylserin 7e-71
4i1y_A314 The Structure Of Cysteine Synthase From Mycobacteri 1e-70
4air_A354 Leishmania Major Cysteine Synthase Length = 354 9e-66
3t4p_A334 Crystal Structure Of O-Acetyl Serine Sulfhydrylase 4e-65
1oas_A322 O-Acetylserine Sulfhydrylase From Salmonella Typhim 1e-61
1d6s_A322 Crystal Structure Of The K41a Mutant Of O-Acetylser 5e-61
1ve1_A304 Crystal Structure Of T.Th. Hb8 O-Acetylserine Sulfh 3e-53
1y7l_A316 O-Acetylserine Sulfhydrylase Complex Length = 316 2e-51
2egu_A308 Crystal Structure Of O-Acetylserine Sulfhydrase Fro 5e-50
2jc3_A303 Structure Of O-acetylserine Sulfhydrylase B From Sa 1e-45
2bhs_A303 Crystal Structure Of Cysteine Synthase B Length = 3 1e-45
2bht_A303 Crystal Structure Of O-Acetylserine Sulfhydrylase B 1e-44
2v03_A303 High Resolution Structure And Catalysis Of An O- Ac 2e-44
3bm5_A338 Crystal Structure Of O-Acetyl-Serine Sulfhydrylase 9e-43
2pqm_A343 Crystal Structure Of Cysteine Synthase (Oass) From 1e-42
3fca_A291 Genetic Incorporation Of A Metal-Ion Chelating Amin 1e-41
1o58_A303 Crystal Structure Of O-Acetylserine Sulfhydrylase ( 2e-41
1m54_A363 Cystathionine-Beta Synthase: Reduced Vicinal Thiols 4e-35
1jbq_A435 Structure Of Human Cystathionine Beta-Synthase: A U 5e-35
3pc2_A 527 Full Length Structure Of Cystathionine Beta-Synthas 6e-35
3dwg_A325 Crystal Structure Of A Sulfur Carrier Protein Compl 9e-34
3dki_A326 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobac 5e-33
3dwi_A323 Crystal Structure Of Mycobacterium Tuberculosis Cys 5e-33
1tdj_A 514 Threonine Deaminase (Biosynthetic) From E. Coli Len 1e-04
1wkv_A389 Crystal Structure Of O-Phosphoserine Sulfhydrylase 1e-04
3vsc_A389 Crystal Structure Of The K127a Mutant Of O-Phosphos 6e-04
>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl- Serine-(Thiol)-Lyase C Length = 430 Back     alignment and structure 
Iteration: 1

 Score =  387 bits (993), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 184/328 (56%), Positives = 245/328 (74%), Gaps = 12/328 (3%)
Query: 81  IEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGY 140
           +++E G D  G+NIA++V+QLIG+TPMVYLN + +GCV N+AAKLE MEPC SVKDRIGY
Sbjct: 102 VKRETGPD--GLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGY 159
Query: 141 SMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRA 200
           SM+TDAE+ G I+PGK+VLVEPT+GNTG+G+AF+AA +GY+LI+TMPAS ++ERR+LL+A
Sbjct: 160 SMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKA 219
Query: 201 FGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLG 260
           FGAE++LTDP KG+ GA+ KAEEI+ NTP+AYM QQFDN AN KIH+++TGPEIW+DT G
Sbjct: 220 FGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKG 279
Query: 261 CVDIFVAAXXXXXXXXXXXRFLKMMNKEIKVVGVEPAERSVISGEN----------AGYV 310
            VDIFVA            RF+K  N + +V+GVEP E  ++SG            AG++
Sbjct: 280 KVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFI 339
Query: 311 PSILDVQLLDEVIKVTNDEAVNMARRLALEEXXXXXXXXXXXXXXXXXXXRRPENSGKLI 370
           P  LD +++DEVI ++++EA+  A++LAL+E                   +RPEN+GKLI
Sbjct: 340 PKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLI 399
Query: 371 AAIFPSFGERYIPTVLFRSIYEEVQNMQ 398
           A +FPSFGERY+ T LF+SI EEV+ MQ
Sbjct: 400 AVVFPSFGERYLSTPLFQSIREEVEKMQ 427
>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana Length = 322 Back     alignment and structure
>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana In Complex With C-Terminal Peptide From Arabidopsis Serine Acetyltransferase Length = 320 Back     alignment and structure
>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetylserine Sulfhydrylase K46a Mutant Length = 322 Back     alignment and structure
>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean Length = 344 Back     alignment and structure
>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a Mutant In Soybean Length = 344 Back     alignment and structure
>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine Sulfhydrylase (oass) From Mycobacterium Tuberculosis In Complex With The Reaction Intermediate Alpha-aminoacrylate Length = 313 Back     alignment and structure
>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc Baa-535 M Length = 314 Back     alignment and structure
>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine Sulfhydrylase (Oass) Holoenzyme From Mycobacterium Tuberculosis Length = 313 Back     alignment and structure
>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium Ulcerans Agy99 Length = 314 Back     alignment and structure
>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase Length = 354 Back     alignment and structure
>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From Leishmania Donovani In Complex With Designed Tetrapeptide Length = 334 Back     alignment and structure
>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium Length = 322 Back     alignment and structure
>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine Sulfhydrylase Complexed In External Aldimine Linkage With Methionine Length = 322 Back     alignment and structure
>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine Sulfhydrylase Length = 304 Back     alignment and structure
>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex Length = 316 Back     alignment and structure
>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From Geobacillus Kaustophilus Hta426 Length = 308 Back     alignment and structure
>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From Salmonella Typhimurium Length = 303 Back     alignment and structure
>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B Length = 303 Back     alignment and structure
>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B Length = 303 Back     alignment and structure
>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O- Acetylserine Sulfhydrylase Length = 303 Back     alignment and structure
>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From Entamoeba Histolytica In Complex With Cysteine Length = 338 Back     alignment and structure
>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From Entamoeba Histolytica At 1.86 A Resolution Length = 343 Back     alignment and structure
>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid Into Proteins As Biophysical Probe Length = 291 Back     alignment and structure
>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665) From Thermotoga Maritima At 1.80 A Resolution Length = 303 Back     alignment and structure
>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols Length = 363 Back     alignment and structure
>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique Pyridoxal 5'- Phosphate Dependent Hemeprotein Length = 435 Back     alignment and structure
>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From Drosophila Length = 527 Back     alignment and structure
>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex Found In The Cysteine Biosynthetic Pathway Of Mycobacterium Tuberculosis Length = 325 Back     alignment and structure
>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium Tuberculosis An O-Phosphoserine Dependent Cysteine Synthase Length = 326 Back     alignment and structure
>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The Cysteine Synthase B Length = 323 Back     alignment and structure
>pdb|1TDJ|A Chain A, Threonine Deaminase (Biosynthetic) From E. Coli Length = 514 Back     alignment and structure
>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Length = 389 Back     alignment and structure
>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine Sulfhydrylase Complexed With External Schiff Base Of Pyridoxal 5'-Phosphate With O- Phospho-L-Serine Length = 389 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
4aec_A430 Cysteine synthase, mitochondrial; lyase, cysteine 0.0
1z7w_A322 Cysteine synthase; transferase; HET: PLP; 2.20A {A 0.0
3tbh_A334 O-acetyl serine sulfhydrylase; cysteine synthase, 0.0
2q3b_A313 Cysteine synthase A; pyridoxal-5'-phosphate, sulph 0.0
1y7l_A316 O-acetylserine sulfhydrylase, O-acetylserine (thio 0.0
1ve1_A304 O-acetylserine sulfhydrylase; PLP, transferase, ri 1e-175
2pqm_A343 Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.8 1e-175
2egu_A308 Cysteine synthase; O-acetylserine sulfhydrase, str 1e-171
1o58_A303 O-acetylserine sulfhydrylase; TM0665, structural g 1e-163
2v03_A303 Cysteine synthase B; pyridoxal phosphate, cysteine 1e-163
3dwg_A325 Cysteine synthase B; sulfur carrier protein comple 1e-161
1wkv_A389 Cysteine synthase; homodimer, open alpha/beta fold 1e-148
1jbq_A435 B, cystathionine beta-synthase, serine sulfhydrase 1e-140
3pc3_A 527 CG1753, isoform A; CBS, synthase, PLP, heme, amino 1e-139
1p5j_A372 L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo 4e-19
1v71_A323 Serine racemase, hypothetical protein C320.14 in c 7e-19
2d1f_A360 Threonine synthase; amino acid synthesis, pyridoxa 1e-18
2zsj_A352 Threonine synthase; PLP dependent enzyme, lyase; H 1e-18
3l6b_A346 Serine racemase; pyridoxal phosphate, PLP, isomera 3e-18
2rkb_A318 Serine dehydratase-like; PLP bound enzyme, enzyme 3e-18
4d9i_A398 Diaminopropionate ammonia-lyase; fold type II PLP- 2e-17
3aey_A351 Threonine synthase; PLP, pyridoxal phosphate, lyas 5e-17
3ss7_X442 D-serine dehydratase; type II fold, ALFA,beta-elim 2e-16
1ve5_A311 Threonine deaminase; riken structural genomics/Pro 2e-16
2gn0_A342 Threonine dehydratase catabolic; TDCB, biodegradat 3e-16
1tdj_A 514 Biosynthetic threonine deaminase; allostery, coope 1e-15
1e5x_A486 Threonine synthase; threonine biosynthesis, PLP en 2e-15
3iau_A366 Threonine deaminase; pyridoxal phosphate, amino-ac 2e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1j0a_A325 1-aminocyclopropane-1-carboxylate deaminase; PLP d 1e-05
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana} Length = 430 Back     alignment and structure
 Score =  558 bits (1441), Expect = 0.0
 Identities = 219/393 (55%), Positives = 285/393 (72%), Gaps = 18/393 (4%)

Query: 16  LLPPHPLNIASQKRHRFARFKTSSLSSINGALATRRRILPIVASAKAGAAASSSSSSLYA 75
           LL P   + +S    RF      S  S + A      +     S   G+    S      
Sbjct: 43  LLNPLTSSSSSSTLRRFRCSPEISSLSFSSASDFSLAMKRQSRSFADGSERDPSVVCEAV 102

Query: 76  TSTREIEKEEGNDFHGVNIAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVK 135
                 +        G+NIA++V+QLIG+TPMVYLN + +GCV N+AAKLE MEPC SVK
Sbjct: 103 KRETGPD--------GLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVK 154

Query: 136 DRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERR 195
           DRIGYSM+TDAE+ G I+PGK+VLVEPT+GNTG+G+AF+AA +GY+LI+TMPAS ++ERR
Sbjct: 155 DRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERR 214

Query: 196 ILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIW 255
           +LL+AFGAE++LTDP KG+ GA+ KAEEI+ NTP+AYM QQFDN AN KIH+++TGPEIW
Sbjct: 215 VLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIW 274

Query: 256 EDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGEN--------- 306
           +DT G VDIFVA IGTGGTITG GRF+K  N + +V+GVEP E  ++SG           
Sbjct: 275 DDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGI 334

Query: 307 -AGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPEN 365
            AG++P  LD +++DEVI ++++EA+  A++LAL+EGL+VGISSGAAAAAAI +A+RPEN
Sbjct: 335 GAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPEN 394

Query: 366 SGKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQ 398
           +GKLIA +FPSFGERY+ T LF+SI EEV+ MQ
Sbjct: 395 AGKLIAVVFPSFGERYLSTPLFQSIREEVEKMQ 427
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A* Length = 322 Back     alignment and structure
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3t4p_A* 3spx_A* 4air_A* Length = 334 Back     alignment and structure
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A Length = 313 Back     alignment and structure
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A* Length = 316 Back     alignment and structure
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A* Length = 304 Back     alignment and structure
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A* Length = 343 Back     alignment and structure
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus} Length = 308 Back     alignment and structure
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A* Length = 303 Back     alignment and structure
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A* Length = 303 Back     alignment and structure
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3fgp_A* 3dki_A* 3dwi_A* Length = 325 Back     alignment and structure
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1 Length = 389 Back     alignment and structure
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A* Length = 435 Back     alignment and structure
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A* Length = 527 Back     alignment and structure
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A* Length = 372 Back     alignment and structure
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A* Length = 323 Back     alignment and structure
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis} Length = 360 Back     alignment and structure
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus} Length = 352 Back     alignment and structure
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A* Length = 346 Back     alignment and structure
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens} Length = 318 Back     alignment and structure
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A* Length = 398 Back     alignment and structure
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A Length = 351 Back     alignment and structure
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A Length = 442 Back     alignment and structure
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1 Length = 311 Back     alignment and structure
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2 Length = 514 Back     alignment and structure
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A* Length = 486 Back     alignment and structure
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum} Length = 366 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A* Length = 325 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
3vc3_A344 Beta-cyanoalnine synthase; beta-cyanoalanine synth 100.0
4aec_A430 Cysteine synthase, mitochondrial; lyase, cysteine 100.0
3tbh_A334 O-acetyl serine sulfhydrylase; cysteine synthase, 100.0
1z7w_A322 Cysteine synthase; transferase; HET: PLP; 2.20A {A 100.0
2v03_A303 Cysteine synthase B; pyridoxal phosphate, cysteine 100.0
2q3b_A313 Cysteine synthase A; pyridoxal-5'-phosphate, sulph 100.0
1y7l_A316 O-acetylserine sulfhydrylase, O-acetylserine (thio 100.0
3dwg_A325 Cysteine synthase B; sulfur carrier protein comple 100.0
2pqm_A343 Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.8 100.0
1ve1_A304 O-acetylserine sulfhydrylase; PLP, transferase, ri 100.0
2egu_A308 Cysteine synthase; O-acetylserine sulfhydrase, str 100.0
1jbq_A435 B, cystathionine beta-synthase, serine sulfhydrase 100.0
1o58_A303 O-acetylserine sulfhydrylase; TM0665, structural g 100.0
3pc3_A 527 CG1753, isoform A; CBS, synthase, PLP, heme, amino 100.0
2d1f_A360 Threonine synthase; amino acid synthesis, pyridoxa 100.0
3aey_A351 Threonine synthase; PLP, pyridoxal phosphate, lyas 100.0
2zsj_A352 Threonine synthase; PLP dependent enzyme, lyase; H 100.0
1p5j_A372 L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo 100.0
4h27_A364 L-serine dehydratase/L-threonine deaminase; PLP de 100.0
3l6b_A346 Serine racemase; pyridoxal phosphate, PLP, isomera 100.0
3ss7_X442 D-serine dehydratase; type II fold, ALFA,beta-elim 100.0
1wkv_A389 Cysteine synthase; homodimer, open alpha/beta fold 100.0
2gn0_A342 Threonine dehydratase catabolic; TDCB, biodegradat 100.0
2rkb_A318 Serine dehydratase-like; PLP bound enzyme, enzyme 100.0
1v71_A323 Serine racemase, hypothetical protein C320.14 in c 100.0
1ve5_A311 Threonine deaminase; riken structural genomics/Pro 100.0
1tdj_A 514 Biosynthetic threonine deaminase; allostery, coope 100.0
3iau_A366 Threonine deaminase; pyridoxal phosphate, amino-ac 100.0
1j0a_A325 1-aminocyclopropane-1-carboxylate deaminase; PLP d 100.0
4d9i_A398 Diaminopropionate ammonia-lyase; fold type II PLP- 100.0
4d9b_A342 D-cysteine desulfhydrase; fold type II PLP-depende 100.0
1f2d_A341 1-aminocyclopropane-1-carboxylate deaminase; carbo 100.0
1x1q_A418 Tryptophan synthase beta chain; structural genomic 100.0
1e5x_A486 Threonine synthase; threonine biosynthesis, PLP en 100.0
1qop_B396 Tryptophan synthase beta chain; lyase, carbon-oxyg 100.0
2o2e_A422 Tryptophan synthase beta chain; amino-acid biosynt 100.0
1v8z_A388 Tryptophan synthase beta chain 1; beta+alpha, rike 100.0
1tzj_A338 ACC deaminase, 1-aminocyclopropane-1-carboxylate d 100.0
1vb3_A428 Threonine synthase; PLP-dependent enzyme, lyase; H 100.0
1kl7_A514 Threonine synthase; threonine synthesis, pyridoxal 100.0
4f4f_A468 Threonine synthase; structural genomics, niaid, na 100.0
3v7n_A487 Threonine synthase; ssgcid, structural genomics, s 100.0
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 93.62
1vp8_A201 Hypothetical protein AF0103; putative pyruvate kin 90.89
3s2e_A340 Zinc-containing alcohol dehydrogenase superfamily; 88.01
4b7c_A336 Probable oxidoreductase; NADP cofactor, rossmann f 87.84
4dup_A353 Quinone oxidoreductase; PSI-biology, structural ge 87.76
4a0s_A447 Octenoyl-COA reductase/carboxylase; oxidoreductase 87.29
3l9w_A 413 Glutathione-regulated potassium-efflux system Pro 87.01
3c85_A183 Putative glutathione-regulated potassium-efflux S 86.75
3jyn_A325 Quinone oxidoreductase; rossmann fold, protein-NAD 86.73
3uog_A363 Alcohol dehydrogenase; structural genomics, protei 86.43
3qwb_A334 Probable quinone oxidoreductase; rossmann fold, qu 85.89
3gaz_A343 Alcohol dehydrogenase superfamily protein; oxidore 85.18
4eye_A342 Probable oxidoreductase; structural genomics, niai 84.59
3tqh_A321 Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella 84.14
1kol_A398 Formaldehyde dehydrogenase; oxidoreductase; HET: N 83.8
3fpc_A352 NADP-dependent alcohol dehydrogenase; oxydoreducta 82.99
3iup_A379 Putative NADPH:quinone oxidoreductase; YP_296108.1 82.95
1jvb_A347 NAD(H)-dependent alcohol dehydrogenase; archaeon, 82.72
3pi7_A349 NADH oxidoreductase; groes-like fold, NAD(P)-bindi 82.4
1t57_A206 Conserved protein MTH1675; structural genomics, FM 82.04
2j8z_A354 Quinone oxidoreductase; medium-chain dehydrogenase 81.82
2c0c_A362 Zinc binding alcohol dehydrogenase, domain contain 81.67
3gms_A340 Putative NADPH:quinone reductase; structural genom 81.33
1yb5_A351 Quinone oxidoreductase; medium-chain dehydrogenase 81.3
4a2c_A346 Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc 81.16
2eih_A343 Alcohol dehydrogenase; zinc ION binding protein, s 81.16
4gkb_A258 3-oxoacyl-[acyl-carrier protein] reductase; putati 81.07
1h2b_A359 Alcohol dehydrogenase; oxidoreductase, archaea, hy 81.02
3gqv_A371 Enoyl reductase; medium-chain reductase (MDR super 80.99
1v3u_A333 Leukotriene B4 12- hydroxydehydrogenase/prostaglan 80.71
3zu3_A405 Putative reductase YPO4104/Y4119/YP_4011; oxidored 80.41
1pqw_A198 Polyketide synthase; rossmann fold, dimer, structu 80.09
2q2v_A255 Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore 80.04
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A* Back     alignment and structure
Probab=100.00  E-value=2e-66  Score=512.90  Aligned_cols=305  Identities=59%  Similarity=0.988  Sum_probs=280.4

Q ss_pred             hHHHhhcccCCCCceecccccccCCCeEEEEeCCCCCCCcchhhhHHHHHHHHHHcCCCCCCCcEEEEeCCChHHHHHHH
Q 015783           94 IAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAF  173 (400)
Q Consensus        94 ~~~~v~~~~~~TPL~~~~~l~~~lg~~i~~K~E~~nptGSfK~Rga~~~~~~a~~~G~~~~g~~~vv~assGN~g~AlA~  173 (400)
                      ..++|...+|+|||+++++|++.+|++||+|+|++|||||||+|+|.+++..+.++|.+.+|+++|+++|+||||.|+|+
T Consensus        25 i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~  104 (344)
T 3vc3_A           25 IKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAF  104 (344)
T ss_dssp             CBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHH
T ss_pred             hhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHH
Confidence            34579999999999999999999999999999999999999999999999999999999888889999999999999999


Q ss_pred             HHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHHHHhCCCceeeCCCCChHHHHHHHHhHHHH
Q 015783          174 VAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPE  253 (400)
Q Consensus       174 aa~~~Gl~~~Vvvp~~~~~~~~~~l~~~GA~V~~~~~~~~~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~g~~ti~~E  253 (400)
                      +|+.+|++|+||||+++++.|+.+|+.|||+|+.++...+..++...+.+++.+.++.+++++|+||.+++.||.|++.|
T Consensus       105 ~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~E  184 (344)
T 3vc3_A          105 MAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPE  184 (344)
T ss_dssp             HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHHH
T ss_pred             HHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999875445566677777777777899999999999988899999999


Q ss_pred             HHhhhCCCCCEEEEecCCChhHHhHHHHHHhcCCCcEEEEEeCCCCccccCCCC----------CCCchhhhhhccCeEE
Q 015783          254 IWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENA----------GYVPSILDVQLLDEVI  323 (400)
Q Consensus       254 i~~Ql~~~pD~vv~pvG~Gg~~aGi~~~~k~~~~~~rvi~Vep~~~~~l~~g~~----------~~~~~~l~~~~~~~~~  323 (400)
                      |++|+++.||+||+|+|+||+++|++.++|+.+|+++||+|||.+++++.++.+          +..+.....+.+|+++
T Consensus       185 I~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~~~~~i~g~g~~~~~~~~~~~~~d~~v  264 (344)
T 3vc3_A          185 IWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVL  264 (344)
T ss_dssp             HHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEE
T ss_pred             HHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCCCCeeEecccccccCcccchhhceEEE
Confidence            999998899999999999999999999999999999999999999998877554          2234445677889999


Q ss_pred             EeCHHHHHHHHHHHHHHcCCeeehhHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCChhHHhhHHHHHHhcccc
Q 015783          324 KVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQ  398 (400)
Q Consensus       324 ~V~d~e~~~a~~~la~~eGi~~~p~sgaa~aaa~~l~~~~~~~~~~vVvl~t~~G~k~~~~~~~~~~~~~~~~~~  398 (400)
                      .|+|+|+++++++|+++|||+++|+||+++++++++++....++++||+|+||+|+||+++++|++|..+.++++
T Consensus       265 ~v~d~eai~a~~~L~~~eGi~v~~ssga~~~aAl~~a~~~~~~g~~VV~il~d~G~rYlst~~~~~~~~e~~~~~  339 (344)
T 3vc3_A          265 EVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENMQ  339 (344)
T ss_dssp             EECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBGGGGTTSTTTHHHHHHHHTCC
T ss_pred             EECHHHHHHHHHHHHHHCCCEEehhHHHHHHHHHHHhccccCCCCEEEEEECCCchhhccchhhHHHHHHhccCC
Confidence            999999999999999999999999999999999999876556889999999999999999999999999988763
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A* Back     alignment and structure
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A* Back     alignment and structure
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A* Back     alignment and structure
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A Back     alignment and structure
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A* Back     alignment and structure
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A* Back     alignment and structure
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A* Back     alignment and structure
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A* Back     alignment and structure
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus} Back     alignment and structure
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A* Back     alignment and structure
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A* Back     alignment and structure
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A* Back     alignment and structure
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis} Back     alignment and structure
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A Back     alignment and structure
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus} Back     alignment and structure
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A* Back     alignment and structure
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A* Back     alignment and structure
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A* Back     alignment and structure
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A Back     alignment and structure
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1 Back     alignment and structure
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens} Back     alignment and structure
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A* Back     alignment and structure
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1 Back     alignment and structure
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2 Back     alignment and structure
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum} Back     alignment and structure
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A* Back     alignment and structure
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A* Back     alignment and structure
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A* Back     alignment and structure
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A* Back     alignment and structure
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A* Back     alignment and structure
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ... Back     alignment and structure
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A Back     alignment and structure
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B* Back     alignment and structure
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A* Back     alignment and structure
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1 Back     alignment and structure
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1 Back     alignment and structure
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV} Back     alignment and structure
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis} Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2 Back     alignment and structure
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Back     alignment and structure
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* Back     alignment and structure
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Back     alignment and structure
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Back     alignment and structure
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Back     alignment and structure
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Back     alignment and structure
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Back     alignment and structure
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Back     alignment and structure
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Back     alignment and structure
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Back     alignment and structure
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Back     alignment and structure
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Back     alignment and structure
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Back     alignment and structure
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2 Back     alignment and structure
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Back     alignment and structure
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Back     alignment and structure
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Back     alignment and structure
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Back     alignment and structure
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Back     alignment and structure
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* Back     alignment and structure
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Back     alignment and structure
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Back     alignment and structure
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* Back     alignment and structure
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Back     alignment and structure
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 400
d1z7wa1320 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (C 4e-89
d1y7la1310 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (C 1e-73
d1o58a_293 c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cystei 3e-73
d1jbqa_355 c.79.1.1 (A:) Cystathionine beta-synthase {Human ( 1e-71
d1ve1a1302 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (C 3e-70
d2bhsa1292 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (C 7e-69
d1fcja_302 c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cystei 5e-68
d1wkva1382 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (C 4e-61
d1tdja1331 c.79.1.1 (A:5-335) Threonine deaminase {Escherichi 4e-42
d1v71a1318 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (S 1e-39
d1ve5a1310 c.79.1.1 (A:2-311) Threonine deaminase {Thermus th 2e-33
d1tyza_338 c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de 6e-32
d1v8za1386 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subun 3e-31
d1j0aa_325 c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de 1e-29
d1f2da_341 c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de 5e-28
d1e5xa_477 c.79.1.1 (A:) Threonine synthase {Mouse-ear cress 2e-26
d1qopb_390 c.79.1.1 (B:) Tryptophan synthase, beta-subunit {S 5e-25
d1v7ca_351 c.79.1.1 (A:) Threonine synthase {Thermus thermoph 5e-24
d1p5ja_319 c.79.1.1 (A:) L-serine dehydratase {Human (Homo sa 7e-24
>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 320 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  270 bits (691), Expect = 4e-89
 Identities = 201/315 (63%), Positives = 256/315 (81%), Gaps = 10/315 (3%)

Query: 94  IAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDIT 153
           IA+DVT+LIG TP+VYLN V EGCVG VAAKLE MEPC SVKDRIG+SMI+DAE+ G I 
Sbjct: 3   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 62

Query: 154 PGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKG 213
           PG++VL+EPT+GNTG+G+AF AA KGYKLI+TMPAS + ERRI+L AFG E++LTDP KG
Sbjct: 63  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 122

Query: 214 LRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGG 273
           ++GA+ KAEEI+  TPN YM QQF+N AN KIH+++TGPEIW+ T G +D FV+ IGTGG
Sbjct: 123 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 182

Query: 274 TITGTGRFLKMMNKEIKVVGVEPAERSVISGEN----------AGYVPSILDVQLLDEVI 323
           TITG G++LK  N  +K+ GVEP E +++SG            AG++PS+L+V L+DEV+
Sbjct: 183 TITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVV 242

Query: 324 KVTNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIP 383
           +V++DE+++MAR+LAL+EGLLVGISSGAAAAAAI LA+RPEN+GKL  AIFPSFGERY+ 
Sbjct: 243 QVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGERYLS 302

Query: 384 TVLFRSIYEEVQNMQ 398
           TVLF +  +E + M 
Sbjct: 303 TVLFDATRKEAEAMT 317
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} Length = 310 Back     information, alignment and structure
>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} Length = 293 Back     information, alignment and structure
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 355 Back     information, alignment and structure
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} Length = 292 Back     information, alignment and structure
>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} Length = 302 Back     information, alignment and structure
>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 382 Back     information, alignment and structure
>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} Length = 331 Back     information, alignment and structure
>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 318 Back     information, alignment and structure
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]} Length = 310 Back     information, alignment and structure
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]} Length = 338 Back     information, alignment and structure
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 386 Back     information, alignment and structure
>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 325 Back     information, alignment and structure
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]} Length = 341 Back     information, alignment and structure
>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 477 Back     information, alignment and structure
>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} Length = 390 Back     information, alignment and structure
>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]} Length = 351 Back     information, alignment and structure
>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 319 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
d1z7wa1320 O-acetylserine sulfhydrylase (Cysteine synthase) { 100.0
d2bhsa1292 O-acetylserine sulfhydrylase (Cysteine synthase) { 100.0
d1ve1a1302 O-acetylserine sulfhydrylase (Cysteine synthase) { 100.0
d1o58a_293 O-acetylserine sulfhydrylase (Cysteine synthase) { 100.0
d1jbqa_355 Cystathionine beta-synthase {Human (Homo sapiens) 100.0
d1y7la1310 O-acetylserine sulfhydrylase (Cysteine synthase) { 100.0
d1wkva1382 O-acetylserine sulfhydrylase (Cysteine synthase) { 100.0
d1v71a1318 Hypothetical protein C320.14 (SPCC320.14, SPCC330. 100.0
d1tdja1331 Threonine deaminase {Escherichia coli [TaxId: 562] 100.0
d1p5ja_319 L-serine dehydratase {Human (Homo sapiens) [TaxId: 100.0
d1ve5a1310 Threonine deaminase {Thermus thermophilus [TaxId: 100.0
d1fcja_302 O-acetylserine sulfhydrylase (Cysteine synthase) { 100.0
d1v7ca_351 Threonine synthase {Thermus thermophilus [TaxId: 2 100.0
d1qopb_390 Tryptophan synthase, beta-subunit {Salmonella typh 100.0
d1v8za1386 Tryptophan synthase, beta-subunit {Archaeon Pyroco 100.0
d1e5xa_477 Threonine synthase {Mouse-ear cress (Arabidopsis t 100.0
d1j0aa_325 1-aminocyclopropane-1-carboxylate deaminase {Archa 100.0
d1tyza_338 1-aminocyclopropane-1-carboxylate deaminase {Pseud 100.0
d1f2da_341 1-aminocyclopropane-1-carboxylate deaminase {Yeast 100.0
d1vb3a1428 Threonine synthase {Escherichia coli [TaxId: 562]} 99.92
d1kl7a_511 Threonine synthase {Baker's yeast (Saccharomyces c 99.73
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 95.56
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 94.98
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 94.36
d1qora2179 Quinone oxidoreductase {Escherichia coli [TaxId: 5 94.12
d1v3va2182 Leukotriene b4 12-hydroxydehydrogenase/prostagland 93.45
d1o8ca277 Hypothetical protein YhdH {Escherichia coli [TaxId 93.15
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 93.06
d1yb5a2174 Quinone oxidoreductase {Human (Homo sapiens) [TaxI 92.99
d1vp8a_190 Hypothetical protein AF0103 {Archaeoglobus fulgidu 92.81
d1jvba2170 Alcohol dehydrogenase {Archaeon Sulfolobus solfata 92.79
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 92.46
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 92.42
d1pqwa_183 Putative enoyl reductase domain of polyketide synt 92.39
d1gu7a2189 2,4-dienoyl-CoA reductase {Yeast (Candida tropical 92.06
d1iz0a2171 Quinone oxidoreductase {Thermus thermophilus [TaxI 91.66
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 90.56
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 90.18
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 90.01
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 89.0
d1tt7a2167 Hypothetical protein YhfP {Bacillus subtilis [TaxI 88.24
d1o89a2177 Hypothetical protein YhdH {Escherichia coli [TaxId 87.66
d3etja278 N5-carboxyaminoimidazole ribonucleotide synthetase 87.46
d1kjqa2111 Glycinamide ribonucleotide transformylase PurT, N- 86.7
d2fr1a1259 Erythromycin synthase, eryAI, 1st ketoreductase mo 86.29
d1w6ua_294 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H 86.26
d1xa0a2176 B. subtilis YhfP homologue {Bacillus stearothermop 84.98
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 83.32
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 83.24
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 83.01
d1t57a_186 Hypothetical protein MTH1675 {Methanobacterium the 82.86
d1vj1a2187 Putative zinc-binding alcohol dehydrogenase {Mouse 82.64
d1ja9a_259 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl 82.63
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 82.35
d1ae1a_258 Tropinone reductase {Jimsonweed (Datura stramonium 82.18
d2fzwa2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 80.58
d2ew8a1247 (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb 80.44
d1bgva1255 Glutamate dehydrogenase {Clostridium symbiosum [Ta 80.31
>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.9e-64  Score=490.93  Aligned_cols=304  Identities=65%  Similarity=1.081  Sum_probs=279.1

Q ss_pred             HHhhcccCCCCceecccccccCCCeEEEEeCCCCCCCcchhhhHHHHHHHHHHcCCCCCCCcEEEEeCCChHHHHHHHHH
Q 015783           96 EDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVA  175 (400)
Q Consensus        96 ~~v~~~~~~TPL~~~~~l~~~lg~~i~~K~E~~nptGSfK~Rga~~~~~~a~~~G~~~~g~~~vv~assGN~g~AlA~aa  175 (400)
                      ++|+..+|+|||+++++|.+.+|++||+|+|++|||||||||+|.+++..++++|.+.++..+++++|+||||.|+|++|
T Consensus         5 ~~i~~~iG~TPLv~~~~l~~~~g~~i~~K~E~~nptGSfKdRgA~~~i~~a~~~g~~~~~~~~vv~aSsGN~g~a~A~~a   84 (320)
T d1z7wa1           5 KDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTA   84 (320)
T ss_dssp             SSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHH
T ss_pred             hhhhhhcCCCCeEECCCcccccCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCceEEeeCCchHHHHHHHHH
Confidence            46888999999999999999999999999999999999999999999999999998877778999999999999999999


Q ss_pred             HHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHHHHhCCCceeeCCCCChHHHHHHHHhHHHHHH
Q 015783          176 AVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIW  255 (400)
Q Consensus       176 ~~~Gl~~~Vvvp~~~~~~~~~~l~~~GA~V~~~~~~~~~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~g~~ti~~Ei~  255 (400)
                      +.+|++|+||||.++++.|+.+++.+||+|+.++...+..+...++.+...+.++.+++++|+|+.++..||+|+|.||.
T Consensus        85 ~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~g~~t~~~EI~  164 (320)
T d1z7wa1          85 AAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIW  164 (320)
T ss_dssp             HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHHHH
T ss_pred             HhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHhCCCceecccccccchHHHhhhhHHHHHH
Confidence            99999999999999999999999999999999986543444555666666667799999999999988889999999999


Q ss_pred             hhhCCCCCEEEEecCCChhHHhHHHHHHhcCCCcEEEEEeCCCCccccCCCC----------CCCchhhhhhccCeEEEe
Q 015783          256 EDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENA----------GYVPSILDVQLLDEVIKV  325 (400)
Q Consensus       256 ~Ql~~~pD~vv~pvG~Gg~~aGi~~~~k~~~~~~rvi~Vep~~~~~l~~g~~----------~~~~~~l~~~~~~~~~~V  325 (400)
                      +|+.++||+||+|+|+||+++|++.+|++.++.+++|+|||.+|+.+.++.+          +.+|+.+..+.+|+++.|
T Consensus       165 ~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~~~s~~~~~~~~~~~~~~gig~~~~~~~~~~~~id~~~~V  244 (320)
T d1z7wa1         165 KGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVVQV  244 (320)
T ss_dssp             HHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEE
T ss_pred             HhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccccCCccccCCCCCCceeeeccCCcCcchhhhhhcceeecc
Confidence            9997789999999999999999999999999999999999999998866433          345777788889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCeeehhHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCChhHHhhHHHHHHhccccc
Q 015783          326 TNDEAVNMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIAAIFPSFGERYIPTVLFRSIYEEVQNMQQ  399 (400)
Q Consensus       326 ~d~e~~~a~~~la~~eGi~~~p~sgaa~aaa~~l~~~~~~~~~~vVvl~t~~G~k~~~~~~~~~~~~~~~~~~~  399 (400)
                      +|+|+++++++|+++|||+++|+||++++++++++++...++++||+|+||+|.||+|++++|+|+.+.+.|+.
T Consensus       245 ~d~e~~~a~~~l~~~eGi~ve~ssga~~aaa~k~a~~~~~~~~~VV~i~~d~G~kYlst~~~d~~~~e~~~~~~  318 (320)
T d1z7wa1         245 SSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTF  318 (320)
T ss_dssp             CHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBGGGGTTSGGGHHHHHHHHTCCC
T ss_pred             CHHHHHHHHHHHHHHCCEEEehHHHHHHHHHHHHHhhccCCCCEEEEEECCCchhhcccccCHHHHHHHhcCCC
Confidence            99999999999999999999999999999999998876568899999999999999999999999999998864
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} Back     information, alignment and structure
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]} Back     information, alignment and structure
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]} Back     information, alignment and structure
>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure
>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Back     information, alignment and structure
>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Back     information, alignment and structure
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Back     information, alignment and structure
>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure