Citrus Sinensis ID: 015812
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 400 | 2.2.26 [Sep-21-2011] | |||||||
| O65351 | 757 | Subtilisin-like protease | no | no | 0.97 | 0.512 | 0.453 | 6e-85 | |
| O64495 | 775 | Subtilisin-like protease | no | no | 0.912 | 0.470 | 0.403 | 1e-68 | |
| Q9LLL8 | 749 | Xylem serine proteinase 1 | no | no | 0.932 | 0.497 | 0.368 | 3e-62 | |
| Q39547 | 731 | Cucumisin OS=Cucumis melo | N/A | no | 0.925 | 0.506 | 0.348 | 5e-60 | |
| P29141 | 806 | Minor extracellular prote | yes | no | 0.66 | 0.327 | 0.291 | 1e-13 | |
| O31788 | 442 | Serine protease AprX OS=B | no | no | 0.255 | 0.230 | 0.347 | 2e-06 | |
| Q02470 | 1902 | PII-type proteinase OS=La | N/A | no | 0.34 | 0.071 | 0.289 | 2e-05 | |
| Q8NZ80 | 1150 | C5a peptidase OS=Streptoc | N/A | no | 0.457 | 0.159 | 0.266 | 3e-05 | |
| P0DD35 | 1169 | C5a peptidase OS=Streptoc | yes | no | 0.457 | 0.156 | 0.266 | 5e-05 | |
| P0DD34 | 1169 | C5a peptidase OS=Streptoc | N/A | no | 0.457 | 0.156 | 0.266 | 5e-05 |
| >sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 | Back alignment and function desciption |
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Score = 314 bits (805), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 182/401 (45%), Positives = 246/401 (61%), Gaps = 13/401 (3%)
Query: 2 KGLPSDKLFPFISAEDAKLANASVENALICKKGTLDPKKVKGKILVC-LDVNTRSVDKGL 60
+ LP DKL PFI A +A +NA+ N +C GTL P+KVKGKI++C +N R V KG
Sbjct: 362 EALP-DKLLPFIYAGNA--SNAT--NGNLCMTGTLIPEKVKGKIVMCDRGINAR-VQKGD 415
Query: 61 QAALAGAAGIVLVNLPEYGNDRMTDPHVLPASDINFNDSVSLFSYITSIKHPVGYITRPT 120
AG G++L N G + + D H+LPA+ + + Y+T+ +P I+
Sbjct: 416 VVKAAGGVGMILANTAANGEELVADAHLLPATTVGEKAGDIIRHYVTTDPNPTASISILG 475
Query: 121 TEFGTKPAPFMAAFSSKGPNIITPEILKPDITAPGENIIAAYTEAQSPTHLNYDKRRSPF 180
T G KP+P +AAFSS+GPN ITP ILKPD+ APG NI+AA+T A PT L D RR F
Sbjct: 476 TVVGVKPSPVVAAFSSRGPNSITPNILKPDLIAPGVNILAAWTGAAGPTGLASDSRRVEF 535
Query: 181 NSVSGTSMSCPHISGIASLLKILHPDWSPAAIQSAIMTTA-STHDNNKQQILNASFAEAT 239
N +SGTSMSCPH+SG+A+LLK +HP+WSPAAI+SA+MTTA T+ + K + A+ +T
Sbjct: 536 NIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSALMTTAYKTYKDGKPLLDIATGKPST 595
Query: 240 PFSYGAGHVQPNLAMDPGLVYDLTANDYLNFLCTLGYNKKEIFWFSKNYTYTC-PNHTIS 298
PF +GAGHV P A +PGL+YDLT DYL FLC L Y +I S+ YTC P+ + S
Sbjct: 596 PFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSVSRR-NYTCDPSKSYS 654
Query: 299 LVDFNYPSISVP-KLSGSITVTRKVKNVGSPGTYQALLKSP-KGVSVTIAPKSLKFINVG 356
+ D NYPS +V G+ TR V +VG GTY + S GV +++ P L F
Sbjct: 655 VADLNYPSFAVNVDGVGAYKYTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEAN 714
Query: 357 EEKSFKVIIKAQNASVTKDYAFGELIWSDDKHHQVRSPIVV 397
E+KS+ V ++ + +FG + WSD K H V SP+ +
Sbjct: 715 EKKSYTVTFTVDSSKPSGSNSFGSIEWSDGK-HVVGSPVAI 754
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Serine protease. Has a substrate preference for the hydrophobic residues Phe and Ala and the basic residue Asp in the P1 position, and for Asp, Leu or Ala in the P1' position. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: - |
| >sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 | Back alignment and function description |
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| >sp|P29141|SUBV_BACSU Minor extracellular protease vpr OS=Bacillus subtilis (strain 168) GN=vpr PE=1 SV=1 | Back alignment and function description |
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| >sp|O31788|APRX_BACSU Serine protease AprX OS=Bacillus subtilis (strain 168) GN=aprX PE=1 SV=1 | Back alignment and function description |
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| >sp|Q02470|P2P_LACPA PII-type proteinase OS=Lactobacillus paracasei GN=prtP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8NZ80|C5AP_STRP8 C5a peptidase OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=scpA PE=3 SV=1 | Back alignment and function description |
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| >sp|P0DD35|C5AP_STRPQ C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=scpA PE=3 SV=1 | Back alignment and function description |
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| >sp|P0DD34|C5AP_STRP3 C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) GN=scpA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 400 | ||||||
| 147787383 | 590 | hypothetical protein VITISV_004299 [Viti | 0.987 | 0.669 | 0.678 | 1e-146 | |
| 225447456 | 769 | PREDICTED: subtilisin-like protease [Vit | 0.987 | 0.513 | 0.678 | 1e-146 | |
| 224129258 | 769 | predicted protein [Populus trichocarpa] | 0.985 | 0.512 | 0.644 | 1e-146 | |
| 296090005 | 803 | unnamed protein product [Vitis vinifera] | 0.987 | 0.491 | 0.635 | 1e-145 | |
| 225462068 | 745 | PREDICTED: subtilisin-like protease-like | 0.987 | 0.530 | 0.635 | 1e-145 | |
| 227053577 | 771 | subtilisin-like serine protease [Carica | 0.987 | 0.512 | 0.646 | 1e-144 | |
| 356510927 | 773 | PREDICTED: subtilisin-like protease-like | 0.975 | 0.504 | 0.646 | 1e-142 | |
| 255567212 | 771 | Xylem serine proteinase 1 precursor, put | 0.985 | 0.511 | 0.636 | 1e-141 | |
| 356525207 | 773 | PREDICTED: subtilisin-like protease-like | 0.975 | 0.504 | 0.641 | 1e-140 | |
| 357462409 | 772 | Subtilisin-like protease [Medicago trunc | 0.98 | 0.507 | 0.622 | 1e-140 |
| >gi|147787383|emb|CAN62337.1| hypothetical protein VITISV_004299 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/398 (67%), Positives = 314/398 (78%), Gaps = 3/398 (0%)
Query: 2 KGLPSDKLFPFISAEDAKLANASVENALICKKGTLDPKKVKGKILVCLDVNTRSVDKGLQ 61
K LP +K FP ISA DAK ANAS ++AL+CK GTLD KVKGKILVCL VDKG Q
Sbjct: 195 KALPPNKFFPLISAADAKAANASADDALLCKAGTLDHSKVKGKILVCLRGENARVDKGQQ 254
Query: 62 AALAGAAGIVLVNLPEYGNDRMTDPHVLPASDINFNDSVSLFSYITSIKHPVGYITRPTT 121
AALAGA G+VL N GN+ + DPHVLPAS INF D V++F+Y+ S K P+ YIT TT
Sbjct: 255 AALAGAVGMVLANNELTGNEVIADPHVLPASHINFTDGVAVFTYLNSTKSPIAYITPSTT 314
Query: 122 EFGTKPAPFMAAFSSKGPNIITPEILKPDITAPGENIIAAYTEAQSPTHLNYDKRRSPFN 181
E GTKPAPFMAAFSSKGPN ITPEILKPDITAPG ++IAAYTEAQ PT+ ++DKRR FN
Sbjct: 315 ELGTKPAPFMAAFSSKGPNTITPEILKPDITAPGVSVIAAYTEAQGPTNQDFDKRRVLFN 374
Query: 182 SVSGTSMSCPHISGIASLLKILHPDWSPAAIQSAIMTTASTHDNNKQQILNASFAEATPF 241
SVSGTSMSCPH+SGI LLK LHPDWSPAAI+SA+MTTA T DN+ + ILNAS+ +ATPF
Sbjct: 375 SVSGTSMSCPHVSGIVGLLKTLHPDWSPAAIRSAMMTTARTMDNSMEAILNASYFKATPF 434
Query: 242 SYGAGHVQPNLAMDPGLVYDLTANDYLNFLCTLGYNKKEIFWFSKNYTYTCPNHTISLVD 301
SYGAGHV+PN AM+PGLVYDL NDYLNFLC LGYN+ I FS+ YTCP ISL +
Sbjct: 435 SYGAGHVRPNRAMNPGLVYDLNVNDYLNFLCALGYNQTLIKMFSER-PYTCPK-PISLTN 492
Query: 302 FNYPSISVPKLSGSITVTRKVKNVGSPGTYQALLKSPKGVSVTIAPKSLKFINVGEEKSF 361
FNYPSI+VPKL GSITVTR +KNVG PGTY+A ++ P G+SV++ P SLKF +GEEK+F
Sbjct: 493 FNYPSITVPKLHGSITVTRTLKNVGPPGTYKARIRKPTGISVSVKPDSLKFNKIGEEKTF 552
Query: 362 KVIIKAQNASVTKDYAFGELIWSDDKHHQVRSPIVVKA 399
+ ++A+ A +DY FGELIWSD KH VRSPIVVKA
Sbjct: 553 SLTLQAERAGAARDYVFGELIWSDAKHF-VRSPIVVKA 589
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225447456|ref|XP_002266728.1| PREDICTED: subtilisin-like protease [Vitis vinifera] gi|296085071|emb|CBI28486.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224129258|ref|XP_002320540.1| predicted protein [Populus trichocarpa] gi|222861313|gb|EEE98855.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|296090005|emb|CBI39824.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225462068|ref|XP_002269877.1| PREDICTED: subtilisin-like protease-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|227053577|gb|ACP18876.1| subtilisin-like serine protease [Carica papaya] | Back alignment and taxonomy information |
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| >gi|356510927|ref|XP_003524185.1| PREDICTED: subtilisin-like protease-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255567212|ref|XP_002524587.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis] gi|223536140|gb|EEF37795.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356525207|ref|XP_003531218.1| PREDICTED: subtilisin-like protease-like [Glycine max] gi|33621210|gb|AAQ23176.1| subtilisin-like protease [Glycine max] gi|409032216|gb|AFV08660.1| subtilisin-like protease [Glycine max] | Back alignment and taxonomy information |
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| >gi|357462409|ref|XP_003601486.1| Subtilisin-like protease [Medicago truncatula] gi|355490534|gb|AES71737.1| Subtilisin-like protease [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 400 | ||||||
| TAIR|locus:2168057 | 778 | SBT5.4 "AT5G59810" [Arabidopsi | 0.985 | 0.506 | 0.574 | 1.8e-119 | |
| TAIR|locus:2050215 | 772 | AIR3 "AT2G04160" [Arabidopsis | 0.982 | 0.509 | 0.558 | 5.9e-112 | |
| UNIPROTKB|Q6H733 | 799 | P0026H03.20-1 "Putative subtil | 0.98 | 0.490 | 0.532 | 9.2e-107 | |
| UNIPROTKB|Q8H4X8 | 762 | OJ1136_A10.113 "Putative subti | 0.987 | 0.518 | 0.469 | 9e-93 | |
| UNIPROTKB|Q0JK21 | 741 | Os01g0702300 "Os01g0702300 pro | 0.985 | 0.531 | 0.471 | 1.9e-92 | |
| TAIR|locus:2158187 | 757 | ARA12 [Arabidopsis thaliana (t | 0.97 | 0.512 | 0.443 | 5.2e-81 | |
| UNIPROTKB|Q94H95 | 764 | OSJNBb0048A17.11 "cDNA clone:J | 0.97 | 0.507 | 0.430 | 2.4e-76 | |
| UNIPROTKB|Q7XTY8 | 776 | OSJNBa0019K04.9 "Os04g0573300 | 0.907 | 0.467 | 0.432 | 1.3e-75 | |
| TAIR|locus:2131566 | 764 | SLP2 "AT4G34980" [Arabidopsis | 0.972 | 0.509 | 0.400 | 3.1e-74 | |
| UNIPROTKB|Q6K7G5 | 782 | OJ1293_A01.13 "Putative subtil | 0.912 | 0.466 | 0.445 | 6.5e-74 |
| TAIR|locus:2168057 SBT5.4 "AT5G59810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
Identities = 228/397 (57%), Positives = 285/397 (71%)
Query: 2 KGLPSDKLFPFISAEDAKLANASVENALICKKGTLDPKKVKGKILVCLDVNTRSVDKXXX 61
K LP +K++ ISA DA +AN +V +AL+CKKG+LDPKKVKGKILVCL + VDK
Sbjct: 382 KPLPEEKMYSLISAADANVANGNVTDALLCKKGSLDPKKVKGKILVCLRGDNARVDKGMQ 441
Query: 62 XXXXXXXXIVLVNLPEYGNDRMTDPHVLPASDINFNDSVSLFSYITSIKHPVGYITRPTT 121
+VL N GN+ ++D HVLPAS I++ D +LFSY++S K P GYI PT
Sbjct: 442 AAAAGAAGMVLCNDKASGNEIISDAHVLPASQIDYKDGETLFSYLSSTKDPKGYIKAPTA 501
Query: 122 EFGTKPAPFMAAFSSKGPNIITPEILKPDITAPGENIIAAYTEAQSPTHLNYDKRRSPFN 181
TKPAPFMA+FSS+GPN ITP ILKPDITAPG NIIAA+TEA PT L+ D RR+PFN
Sbjct: 502 TLNTKPAPFMASFSSRGPNTITPGILKPDITAPGVNIIAAFTEATGPTDLDSDNRRTPFN 561
Query: 182 SVSGTSMSCPHISGIASLLKILHPDWSPAAIQSAIMTTASTHDNNKQQILNASFAEATPF 241
+ SGTSMSCPHISG+ LLK LHP WSPAAI+SAIMTT+ T +N ++ +++ SF +A PF
Sbjct: 562 TESGTSMSCPHISGVVGLLKTLHPHWSPAAIRSAIMTTSRTRNNRRKPMVDESFKKANPF 621
Query: 242 SYGAGHVQPNLAMDPGLVYDLTANDYLNFLCTLGYNKKEIFWFSKNYTYTCPNHTISLVD 301
SYG+GHVQPN A PGLVYDLT DYL+FLC +GYN + F+++ YTC +L+D
Sbjct: 622 SYGSGHVQPNKAAHPGLVYDLTTGDYLDFLCAVGYNNTVVQLFAEDPQYTC-RQGANLLD 680
Query: 302 FNYPSISVPKLSGSITVTRKVKNVGSPGTYQALLKSPKGVSVTIAPKSLKFINVGEEKSF 361
FNYPSI+VP L+GSITVTRK+KNVG P TY A + P GV V++ PK L F GE K F
Sbjct: 681 FNYPSITVPNLTGSITVTRKLKNVGPPATYNARFREPLGVRVSVEPKQLTFNKTGEVKIF 740
Query: 362 KVIIKAQNASVTKDYAFGELIWSDDKHHQVRSPIVVK 398
++ ++ + + Y FGEL W+D HH VRSPIVV+
Sbjct: 741 QMTLRPLPVTPS-GYVFGELTWTDS-HHYVRSPIVVQ 775
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| TAIR|locus:2050215 AIR3 "AT2G04160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6H733 P0026H03.20-1 "Putative subtilisin-like proteinase AIR3" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8H4X8 OJ1136_A10.113 "Putative subtilisin-like serine protease AIR3" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q0JK21 Os01g0702300 "Os01g0702300 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2158187 ARA12 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q94H95 OSJNBb0048A17.11 "cDNA clone:J033123P12, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7XTY8 OSJNBa0019K04.9 "Os04g0573300 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2131566 SLP2 "AT4G34980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6K7G5 OJ1293_A01.13 "Putative subtilisin-like proteinase" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.21 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | eugene3.00141185 | hypothetical protein (769 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 400 | |||
| cd04852 | 307 | cd04852, Peptidases_S8_3, Peptidase S8 family doma | 7e-35 | |
| cd07474 | 295 | cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid | 4e-23 | |
| cd02120 | 126 | cd02120, PA_subtilisin_like, PA_subtilisin_like: P | 6e-22 | |
| cd07487 | 264 | cd07487, Peptidases_S8_1, Peptidase S8 family doma | 1e-16 | |
| pfam00082 | 277 | pfam00082, Peptidase_S8, Subtilase family | 2e-14 | |
| cd07490 | 254 | cd07490, Peptidases_S8_6, Peptidase S8 family doma | 1e-13 | |
| cd07489 | 312 | cd07489, Peptidases_S8_5, Peptidase S8 family doma | 2e-13 | |
| cd04842 | 293 | cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 | 2e-12 | |
| cd07475 | 346 | cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 | 6e-12 | |
| cd07478 | 455 | cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam | 1e-11 | |
| cd04077 | 255 | cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep | 1e-11 | |
| cd00306 | 241 | cd00306, Peptidases_S8_S53, Peptidase domain in th | 2e-11 | |
| cd07477 | 229 | cd07477, Peptidases_S8_Subtilisin_subset, Peptidas | 2e-11 | |
| cd07473 | 259 | cd07473, Peptidases_S8_Subtilisin_like, Peptidase | 6e-11 | |
| cd05562 | 275 | cd05562, Peptidases_S53_like, Peptidase domain in | 7e-08 | |
| cd07484 | 260 | cd07484, Peptidases_S8_Thermitase_like, Peptidase | 7e-08 | |
| cd07481 | 264 | cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep | 1e-07 | |
| cd07493 | 261 | cd07493, Peptidases_S8_9, Peptidase S8 family doma | 1e-07 | |
| pfam02225 | 96 | pfam02225, PA, PA domain | 6e-07 | |
| cd07480 | 297 | cd07480, Peptidases_S8_12, Peptidase S8 family dom | 9e-07 | |
| TIGR03921 | 350 | TIGR03921, T7SS_mycosin, type VII secretion-associ | 2e-06 | |
| cd07498 | 242 | cd07498, Peptidases_S8_15, Peptidase S8 family dom | 1e-05 | |
| cd07496 | 285 | cd07496, Peptidases_S8_13, Peptidase S8 family dom | 2e-05 | |
| cd00538 | 126 | cd00538, PA, PA: Protease-associated (PA) domain | 4e-05 | |
| COG1404 | 508 | COG1404, AprE, Subtilisin-like serine proteases [P | 5e-05 | |
| cd04848 | 267 | cd04848, Peptidases_S8_Autotransporter_serine_prot | 6e-05 | |
| cd07497 | 311 | cd07497, Peptidases_S8_14, Peptidase S8 family dom | 2e-04 | |
| cd07483 | 291 | cd07483, Peptidases_S8_Subtilisin_Novo-like, Pepti | 6e-04 | |
| cd07485 | 273 | cd07485, Peptidases_S8_Fervidolysin_like, Peptidas | 7e-04 | |
| PTZ00262 | 639 | PTZ00262, PTZ00262, subtilisin-like protease; Prov | 0.001 | |
| cd04847 | 291 | cd04847, Peptidases_S8_Subtilisin_like_2, Peptidas | 0.003 |
| >gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 7e-35
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 147 LKPDITAPGENIIAAYTEAQSPTHLNYDKRRSPFNSVSGTSMSCPHISGIASLLKILHPD 206
LKPDI APG +I+AA+T D R F +SGTSM+ PH++G+A+LLK HPD
Sbjct: 236 LKPDIAAPGVDILAAWT---PEGADPGDARGEDFAFISGTSMASPHVAGVAALLKSAHPD 292
Query: 207 WSPAAIQSAIMTTAS 221
WSPAAI+SA+MTTA
Sbjct: 293 WSPAAIKSALMTTAY 307
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307 |
| >gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|239035 cd02120, PA_subtilisin_like, PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases | Back alignment and domain information |
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| >gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
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| >gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family | Back alignment and domain information |
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| >gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
|---|
| >gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
|---|
| >gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
|---|
| >gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
|---|
| >gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families | Back alignment and domain information |
|---|
| >gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173798 cd05562, Peptidases_S53_like, Peptidase domain in the S53 family | Back alignment and domain information |
|---|
| >gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 | Back alignment and domain information |
|---|
| >gnl|CDD|216938 pfam02225, PA, PA domain | Back alignment and domain information |
|---|
| >gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
|---|
| >gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin | Back alignment and domain information |
|---|
| >gnl|CDD|173822 cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15 | Back alignment and domain information |
|---|
| >gnl|CDD|173820 cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13 | Back alignment and domain information |
|---|
| >gnl|CDD|238300 cd00538, PA, PA: Protease-associated (PA) domain | Back alignment and domain information |
|---|
| >gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
| >gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 | Back alignment and domain information |
|---|
| >gnl|CDD|173809 cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173811 cd07485, Peptidases_S8_Fervidolysin_like, Peptidase S8 family domain in Fervidolysin | Back alignment and domain information |
|---|
| >gnl|CDD|240338 PTZ00262, PTZ00262, subtilisin-like protease; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173793 cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 400 | |||
| cd05562 | 275 | Peptidases_S53_like Peptidase domain in the S53 fa | 99.84 | |
| cd07475 | 346 | Peptidases_S8_C5a_Peptidase Peptidase S8 family do | 99.78 | |
| cd07478 | 455 | Peptidases_S8_CspA-like Peptidase S8 family domain | 99.77 | |
| cd07474 | 295 | Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam | 99.77 | |
| cd07497 | 311 | Peptidases_S8_14 Peptidase S8 family domain, uncha | 99.76 | |
| cd02133 | 143 | PA_C5a_like PA_C5a_like: Protease-associated domai | 99.75 | |
| cd07489 | 312 | Peptidases_S8_5 Peptidase S8 family domain, unchar | 99.74 | |
| cd04857 | 412 | Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid | 99.72 | |
| cd07493 | 261 | Peptidases_S8_9 Peptidase S8 family domain, unchar | 99.71 | |
| PTZ00262 | 639 | subtilisin-like protease; Provisional | 99.71 | |
| cd07481 | 264 | Peptidases_S8_BacillopeptidaseF-like Peptidase S8 | 99.7 | |
| cd05561 | 239 | Peptidases_S8_4 Peptidase S8 family domain, unchar | 99.7 | |
| cd07479 | 255 | Peptidases_S8_SKI-1_like Peptidase S8 family domai | 99.7 | |
| cd04847 | 291 | Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil | 99.69 | |
| PF00082 | 282 | Peptidase_S8: Subtilase family This is family S8 i | 99.65 | |
| cd07487 | 264 | Peptidases_S8_1 Peptidase S8 family domain, unchar | 99.64 | |
| cd07483 | 291 | Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa | 99.63 | |
| cd07476 | 267 | Peptidases_S8_thiazoline_oxidase_subtilisin-like_p | 99.61 | |
| cd02120 | 126 | PA_subtilisin_like PA_subtilisin_like: Protease-as | 99.59 | |
| cd04842 | 293 | Peptidases_S8_Kp43_protease Peptidase S8 family do | 99.58 | |
| cd02129 | 120 | PA_hSPPL_like PA_hSPPL_like: Protease-associated d | 99.58 | |
| cd07498 | 242 | Peptidases_S8_15 Peptidase S8 family domain, uncha | 99.57 | |
| cd04816 | 122 | PA_SaNapH_like PA_SaNapH_like: Protease-associated | 99.57 | |
| cd04843 | 277 | Peptidases_S8_11 Peptidase S8 family domain, uncha | 99.57 | |
| cd04077 | 255 | Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 | 99.56 | |
| cd02127 | 118 | PA_hPAP21_like PA_hPAP21_like: Protease-associated | 99.53 | |
| cd07490 | 254 | Peptidases_S8_6 Peptidase S8 family domain, unchar | 99.53 | |
| cd07473 | 259 | Peptidases_S8_Subtilisin_like Peptidase S8 family | 99.53 | |
| cd07496 | 285 | Peptidases_S8_13 Peptidase S8 family domain, uncha | 99.52 | |
| cd02122 | 138 | PA_GRAIL_like PA _GRAIL_like: Protease-associated | 99.52 | |
| cd04818 | 118 | PA_subtilisin_1 PA_subtilisin_1: Protease-associat | 99.51 | |
| PF02225 | 101 | PA: PA domain; InterPro: IPR003137 The PA (Proteas | 99.51 | |
| KOG1114 | 1304 | consensus Tripeptidyl peptidase II [Posttranslatio | 99.51 | |
| cd04059 | 297 | Peptidases_S8_Protein_convertases_Kexins_Furin-lik | 99.51 | |
| cd04852 | 307 | Peptidases_S8_3 Peptidase S8 family domain, unchar | 99.5 | |
| cd02126 | 126 | PA_EDEM3_like PA_EDEM3_like: protease associated d | 99.5 | |
| cd07477 | 229 | Peptidases_S8_Subtilisin_subset Peptidase S8 famil | 99.49 | |
| cd02130 | 122 | PA_ScAPY_like PA_ScAPY_like: Protease-associated d | 99.49 | |
| cd07485 | 273 | Peptidases_S8_Fervidolysin_like Peptidase S8 famil | 99.49 | |
| cd02125 | 127 | PA_VSR PA_VSR: Protease-associated (PA) domain-con | 99.47 | |
| cd02132 | 139 | PA_GO-like PA_GO-like: Protease-associated domain | 99.47 | |
| cd07484 | 260 | Peptidases_S8_Thermitase_like Peptidase S8 family | 99.46 | |
| cd07480 | 297 | Peptidases_S8_12 Peptidase S8 family domain, uncha | 99.44 | |
| cd00538 | 126 | PA PA: Protease-associated (PA) domain. The PA dom | 99.44 | |
| cd07494 | 298 | Peptidases_S8_10 Peptidase S8 family domain, uncha | 99.43 | |
| cd07488 | 247 | Peptidases_S8_2 Peptidase S8 family domain, unchar | 99.43 | |
| cd07492 | 222 | Peptidases_S8_8 Peptidase S8 family domain, unchar | 99.42 | |
| cd02124 | 129 | PA_PoS1_like PA_PoS1_like: Protease-associated (PA | 99.42 | |
| cd04813 | 117 | PA_1 PA_1: Protease-associated (PA) domain subgrou | 99.42 | |
| cd07482 | 294 | Peptidases_S8_Lantibiotic_specific_protease Peptid | 99.38 | |
| cd02123 | 153 | PA_C_RZF_like PA_C-RZF_ like: Protease-associated | 99.36 | |
| cd04848 | 267 | Peptidases_S8_Autotransporter_serine_protease_like | 99.36 | |
| cd04817 | 139 | PA_VapT_like PA_VapT_like: Protease-associated dom | 99.36 | |
| KOG1153 | 501 | consensus Subtilisin-related protease/Vacuolar pro | 99.31 | |
| cd07491 | 247 | Peptidases_S8_7 Peptidase S8 family domain, unchar | 99.24 | |
| cd04819 | 127 | PA_2 PA_2: Protease-associated (PA) domain subgrou | 99.18 | |
| cd00306 | 241 | Peptidases_S8_S53 Peptidase domain in the S8 and S | 99.12 | |
| KOG4266 | 1033 | consensus Subtilisin kexin isozyme-1/site 1 protea | 99.07 | |
| PF06280 | 112 | DUF1034: Fn3-like domain (DUF1034); InterPro: IPR0 | 98.89 | |
| cd04815 | 134 | PA_M28_2 PA_M28_2: Protease-associated (PA) domain | 98.79 | |
| cd02128 | 183 | PA_TfR PA_TfR: Protease-associated domain containi | 98.63 | |
| cd04814 | 142 | PA_M28_1 PA_M28_1: Protease-associated (PA) domain | 98.5 | |
| cd04822 | 151 | PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) do | 98.44 | |
| cd04820 | 137 | PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) do | 98.43 | |
| KOG2442 | 541 | consensus Uncharacterized conserved protein, conta | 98.36 | |
| COG1404 | 508 | AprE Subtilisin-like serine proteases [Posttransla | 98.31 | |
| cd02121 | 220 | PA_GCPII_like PA_GCPII_like: Protease-associated d | 98.25 | |
| KOG3920 | 193 | consensus Uncharacterized conserved protein, conta | 98.04 | |
| KOG4628 | 348 | consensus Predicted E3 ubiquitin ligase [Posttrans | 98.01 | |
| cd02131 | 153 | PA_hNAALADL2_like PA_hNAALADL2_like: Protease-asso | 97.85 | |
| cd04056 | 361 | Peptidases_S53 Peptidase domain in the S53 family. | 97.31 | |
| cd04821 | 157 | PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) do | 97.18 | |
| PF14874 | 102 | PapD-like: Flagellar-associated PapD-like | 96.86 | |
| PF10633 | 78 | NPCBM_assoc: NPCBM-associated, NEW3 domain of alph | 96.14 | |
| KOG3526 | 629 | consensus Subtilisin-like proprotein convertase [P | 94.5 | |
| PF11614 | 118 | FixG_C: IG-like fold at C-terminal of FixG, putati | 93.6 | |
| COG1470 | 513 | Predicted membrane protein [Function unknown] | 88.41 | |
| PF00345 | 122 | PapD_N: Pili and flagellar-assembly chaperone, Pap | 83.81 |
| >cd05562 Peptidases_S53_like Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=180.73 Aligned_cols=98 Identities=28% Similarity=0.340 Sum_probs=81.6
Q ss_pred cccCCCCCCCCCCCCCCCcEEcCCC-ceeecccCCCCCCCcCCCCCCCCceeeccccchhhHHHHHHHHHHhhCCCCCHH
Q 015812 132 AAFSSKGPNIITPEILKPDITAPGE-NIIAAYTEAQSPTHLNYDKRRSPFNSVSGTSMSCPHISGIASLLKILHPDWSPA 210 (400)
Q Consensus 132 a~fSs~Gp~~~~~~~~KPdi~APG~-~I~sa~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~vAG~aALl~~~~p~~s~~ 210 (400)
+.|++|||.. ...+||||+|||+ ++.+.+. .+.|..++|||||||||||++|||+|++|+|++.
T Consensus 176 ~~~~~~~p~~--~~~~~~di~Apgg~~~~~~~~-------------~~~~~~~sGTS~AaP~VaG~aALl~~~~p~lt~~ 240 (275)
T cd05562 176 DPVGIRLPTP--EVRQKPDVTAPDGVNGTVDGD-------------GDGPPNFFGTSAAAPHAAGVAALVLSANPGLTPA 240 (275)
T ss_pred cCCcccCcCC--CCCcCCeEEcCCcccccCCCc-------------CCceeecccchHHHHHHHHHHHHHHHhCCCCCHH
Confidence 4566777876 6789999999975 4444433 2678999999999999999999999999999999
Q ss_pred HHHHHHHcccccCCCcchhhccccCCCCCCCCCCCceecccccCC
Q 015812 211 AIQSAIMTTASTHDNNKQQILNASFAEATPFSYGAGHVQPNLAMD 255 (400)
Q Consensus 211 ~ik~~l~~tA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 255 (400)
+||++|++||+++.. +.....||||+||+.+|++
T Consensus 241 ~v~~~L~~tA~~~~~-----------~g~d~~~G~G~vda~~Av~ 274 (275)
T cd05562 241 DIRDALRSTALDMGE-----------PGYDNASGSGLVDADRAVA 274 (275)
T ss_pred HHHHHHHHhCcccCC-----------CCCCCCcCcCcccHHHHhh
Confidence 999999999987632 2345689999999999986
|
Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functi |
| >cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
|---|
| >cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins | Back alignment and domain information |
|---|
| >cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
|---|
| >cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 | Back alignment and domain information |
|---|
| >cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase | Back alignment and domain information |
|---|
| >cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
|---|
| >cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II | Back alignment and domain information |
|---|
| >cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 | Back alignment and domain information |
|---|
| >PTZ00262 subtilisin-like protease; Provisional | Back alignment and domain information |
|---|
| >cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
|---|
| >cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 | Back alignment and domain information |
|---|
| >cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins | Back alignment and domain information |
|---|
| >cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
| >PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification | Back alignment and domain information |
|---|
| >cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
|---|
| >cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins | Back alignment and domain information |
|---|
| >cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases | Back alignment and domain information |
|---|
| >cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases | Back alignment and domain information |
|---|
| >cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
|---|
| >cd02129 PA_hSPPL_like PA_hSPPL_like: Protease-associated domain containing human signal peptide peptidase-like (hSPPL)-like | Back alignment and domain information |
|---|
| >cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 | Back alignment and domain information |
|---|
| >cd04816 PA_SaNapH_like PA_SaNapH_like: Protease-associated domain containing proteins like Streptomyces anulatus N-acetylpuromycin N-acetylhydrolase (SaNapH) | Back alignment and domain information |
|---|
| >cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 | Back alignment and domain information |
|---|
| >cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
|---|
| >cd02127 PA_hPAP21_like PA_hPAP21_like: Protease-associated domain containing proteins like the human secreted glycoprotein hPAP21 (human protease-associated domain-containing protein, 21kDa) | Back alignment and domain information |
|---|
| >cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
|---|
| >cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
| >cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 | Back alignment and domain information |
|---|
| >cd02122 PA_GRAIL_like PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like | Back alignment and domain information |
|---|
| >cd04818 PA_subtilisin_1 PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1 | Back alignment and domain information |
|---|
| >PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A [] | Back alignment and domain information |
|---|
| >KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases | Back alignment and domain information |
|---|
| >cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 | Back alignment and domain information |
|---|
| >cd02126 PA_EDEM3_like PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins | Back alignment and domain information |
|---|
| >cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
|---|
| >cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY) | Back alignment and domain information |
|---|
| >cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin | Back alignment and domain information |
|---|
| >cd02125 PA_VSR PA_VSR: Protease-associated (PA) domain-containing plant vacuolar sorting receptor (VSR) | Back alignment and domain information |
|---|
| >cd02132 PA_GO-like PA_GO-like: Protease-associated domain containing proteins like Arabidopsis thaliana growth-on protein GRO10 | Back alignment and domain information |
|---|
| >cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
|---|
| >cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
|---|
| >cd00538 PA PA: Protease-associated (PA) domain | Back alignment and domain information |
|---|
| >cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 | Back alignment and domain information |
|---|
| >cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 | Back alignment and domain information |
|---|
| >cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 | Back alignment and domain information |
|---|
| >cd02124 PA_PoS1_like PA_PoS1_like: Protease-associated (PA) domain PoS1-like | Back alignment and domain information |
|---|
| >cd04813 PA_1 PA_1: Protease-associated (PA) domain subgroup 1 | Back alignment and domain information |
|---|
| >cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases | Back alignment and domain information |
|---|
| >cd02123 PA_C_RZF_like PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like | Back alignment and domain information |
|---|
| >cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
| >cd04817 PA_VapT_like PA_VapT_like: Protease-associated domain containing proteins like VapT from Vibrio metschnikovii strain RH530 | Back alignment and domain information |
|---|
| >KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 | Back alignment and domain information |
|---|
| >cd04819 PA_2 PA_2: Protease-associated (PA) domain subgroup 2 | Back alignment and domain information |
|---|
| >cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families | Back alignment and domain information |
|---|
| >KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF06280 DUF1034: Fn3-like domain (DUF1034); InterPro: IPR010435 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd04815 PA_M28_2 PA_M28_2: Protease-associated (PA) domain, peptidase family M28, subfamily-2 | Back alignment and domain information |
|---|
| >cd02128 PA_TfR PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR) | Back alignment and domain information |
|---|
| >cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1 | Back alignment and domain information |
|---|
| >cd04822 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 3 | Back alignment and domain information |
|---|
| >cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1 | Back alignment and domain information |
|---|
| >KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] | Back alignment and domain information |
|---|
| >COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02121 PA_GCPII_like PA_GCPII_like: Protease-associated domain containing protein, glutamate carboxypeptidase II (GCPII)-like | Back alignment and domain information |
|---|
| >KOG3920 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02131 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-associated domain containing proteins like human N-acetylated alpha-linked acidic dipeptidase-like 2 protein (hNAALADL2) | Back alignment and domain information |
|---|
| >cd04056 Peptidases_S53 Peptidase domain in the S53 family | Back alignment and domain information |
|---|
| >cd04821 PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 2 | Back alignment and domain information |
|---|
| >PF14874 PapD-like: Flagellar-associated PapD-like | Back alignment and domain information |
|---|
| >PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known | Back alignment and domain information |
|---|
| >KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF11614 FixG_C: IG-like fold at C-terminal of FixG, putative oxidoreductase; PDB: 2R39_A | Back alignment and domain information |
|---|
| >COG1470 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF00345 PapD_N: Pili and flagellar-assembly chaperone, PapD N-terminal domain; InterPro: IPR016147 Most Gram-negative bacteria possess a supramolecular structure - the pili - on their surface, which mediates attachment to specific receptors | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 400 | ||||
| 3vta_A | 621 | Crystal Structure Of Cucumisin, A Subtilisin-Like E | 2e-58 | ||
| 3i6s_A | 649 | Crystal Structure Of The Plant Subtilisin-Like Prot | 4e-44 | ||
| 3afg_A | 539 | Crystal Structure Of Pron-Tk-Sp From Thermococcus K | 4e-10 | ||
| 1wsd_A | 269 | Alkaline M-Protease Form I Crystal Strcuture Length | 3e-05 | ||
| 2b6n_A | 278 | The 1.8 A Crystal Structure Of A Proteinase K Like | 6e-05 | ||
| 3f49_S | 266 | Anion-Triggered Engineered Subtilisin Subt_bacam Le | 8e-05 | ||
| 1c9j_A | 269 | Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A | 8e-05 | ||
| 1ah2_A | 269 | Serine Protease Pb92 From Bacillus Alcalophilus, Nm | 9e-05 | ||
| 1ndu_A | 269 | Bacillus Lentus Subtilisin Variant S101gV104N Lengt | 9e-05 | ||
| 1ndq_A | 269 | Bacillus Lentus Subtilisin Length = 269 | 1e-04 | ||
| 1st3_A | 269 | The Crystal Structure Of The Bacillus Lentus Alkali | 1e-04 | ||
| 3cnq_S | 266 | Prosubtilisin Substrate Complex Of Subtilisin Subt_ | 2e-04 | ||
| 4dzt_A | 276 | Aqualysin I: The Crystal Structure Of A Serine Prot | 2e-04 | ||
| 1c9n_A | 269 | Bacillus Lentus Substilisin Variant (Ser 87) K27rV1 | 2e-04 | ||
| 1iav_A | 269 | Structure On Native (Asn 87) Subtilisin From Bacill | 3e-04 | ||
| 1q5p_A | 269 | S156e/s166d Variant Of Bacillus Lentus Subtilisin L | 3e-04 | ||
| 1c9m_A | 269 | Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I L | 3e-04 | ||
| 1sua_A | 266 | Subtilisin Bpn' Length = 266 | 4e-04 | ||
| 1spb_S | 266 | Subtilisin Bpn' Prosegment (77 Residues) Complexed | 4e-04 | ||
| 1yjb_A | 275 | Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant Wit | 4e-04 | ||
| 1sbi_A | 275 | Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, | 4e-04 | ||
| 1ak9_A | 275 | Subtilisin Mutant 8321 Length = 275 | 5e-04 | ||
| 2sbt_A | 275 | A Comparison Of The Three-Dimensional Structures Of | 5e-04 | ||
| 1dui_A | 266 | Subtilisin Bpn' From Bacillus Amyloliquefaciens, Cr | 5e-04 | ||
| 2sni_E | 275 | Structural Comparison Of Two Serine Proteinase-Prot | 5e-04 | ||
| 1s01_A | 275 | Large Increases In General Stability For Subtilisin | 5e-04 | ||
| 1sue_A | 266 | Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mu | 6e-04 | ||
| 1aqn_A | 275 | Subtilisin Mutant 8324 Length = 275 | 6e-04 | ||
| 3eif_A | 936 | 1.9 Angstrom Crystal Structure Of The Active Form O | 7e-04 | ||
| 1s02_A | 275 | Effects Of Engineered Salt Bridges On The Stability | 8e-04 | ||
| 1lw6_E | 281 | Crystal Structure Of The Complex Of Subtilisin Bpn' | 8e-04 | ||
| 2sic_E | 275 | Refined Crystal Structure Of The Complex Of Subtili | 8e-04 |
| >pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like Endoprotease From Cucumis Melo L Length = 621 | Back alignment and structure |
|
| >pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease Sbt3 Length = 649 | Back alignment and structure |
| >pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus Kodakaraensis Length = 539 | Back alignment and structure |
| >pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture Length = 269 | Back alignment and structure |
| >pdb|2B6N|A Chain A, The 1.8 A Crystal Structure Of A Proteinase K Like Enzyme From A Psychrotroph Serratia Species Length = 278 | Back alignment and structure |
| >pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam Length = 266 | Back alignment and structure |
| >pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant Length = 269 | Back alignment and structure |
| >pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18 Structures Length = 269 | Back alignment and structure |
| >pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N Length = 269 | Back alignment and structure |
| >pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin Length = 269 | Back alignment and structure |
| >pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline Protease, Subtilisin Bl, At 1.4 Angstroms Resolution Length = 269 | Back alignment and structure |
| >pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam Length = 266 | Back alignment and structure |
| >pdb|4DZT|A Chain A, Aqualysin I: The Crystal Structure Of A Serine Protease From An Extreme Thermophile, Thermus Aquaticus Yt-1 Length = 276 | Back alignment and structure |
| >pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87) K27rV104YN123ST274A Length = 269 | Back alignment and structure |
| >pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus Lentus Length = 269 | Back alignment and structure |
| >pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin Length = 269 | Back alignment and structure |
| >pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I Length = 269 | Back alignment and structure |
| >pdb|1SUA|A Chain A, Subtilisin Bpn' Length = 266 | Back alignment and structure |
| >pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6. Crystallization Temperature 20 C Diffraction Temperature- 160 C Length = 266 | Back alignment and structure |
| >pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met 50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169 Replaced By Ala, Gln 206 Replaced By Cys, Asn 218 Replaced By Ser And Lys 256 Replaced By Tyr) (M50f, N76d, G169a, Q206c, N218s, And K256y) In 35% Dimethylformamide Length = 275 | Back alignment and structure |
| >pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d, G169a, Q206c, N218s) Length = 275 | Back alignment and structure |
| >pdb|1AK9|A Chain A, Subtilisin Mutant 8321 Length = 275 | Back alignment and structure |
| >pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of Subtilisin Bpn And Subtilisin Novo Length = 275 | Back alignment and structure |
| >pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal Growth Mutant Length = 266 | Back alignment and structure |
| >pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And Ci-2- Subtilisin Novo Length = 275 | Back alignment and structure |
| >pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin Bpn(Prime) Through Incremental Changes In The Free Energy Of Unfolding Length = 275 | Back alignment and structure |
| >pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant Length = 266 | Back alignment and structure |
| >pdb|1AQN|A Chain A, Subtilisin Mutant 8324 Length = 275 | Back alignment and structure |
| >pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The C5a Peptidase From Streptococcus Pyogenes (Scpa) Length = 936 | Back alignment and structure |
| >pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of Subtilisin Bpn' Length = 275 | Back alignment and structure |
| >pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution Length = 281 | Back alignment and structure |
| >pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin Bpn' And Streptomyces Subtilisin Inhibitor At 1.8 Angstroms Resolution Length = 275 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Length = 621 | Back alignment and structure |
|---|
Score = 384 bits (986), Expect = e-129
Identities = 133/400 (33%), Positives = 212/400 (53%), Gaps = 27/400 (6%)
Query: 5 PSDKLFPFISAEDAKLANASVENALICKKGTLDPKKVKGKILVCLDVNTRSVDKGLQAAL 64
++ +P +S D + C +++P +KGKI+VC +L
Sbjct: 244 FDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVC---EASFGPHEFFKSL 300
Query: 65 AGAAGIVLVNLPEYGNDRMTDPHVLPASDINFNDSVSLFSYITSIKHPVGYITRPTTEFG 124
GAAG+++ + D + LP+S ++ ND ++ YI SI+ P I +T
Sbjct: 301 DGAAGVLMTS----NTRDYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIF-KSTTIL 355
Query: 125 TKPAPFMAAFSSKGPNIITPEILKPDITAPGENIIAAYTEAQSPTHLNYDKRRSPFNSVS 184
AP + +FSS+GPN T +++KPDI+ PG I+AA+ +R + FN +S
Sbjct: 356 NASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIIS 412
Query: 185 GTSMSCPHISGIASLLKILHPDWSPAAIQSAIMTTASTHDNNKQQILNASFAEATPFSYG 244
GTSMSCPHI+GIA+ +K +P WSPAAI+SA+MTTAS + F+YG
Sbjct: 413 GTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNP--------QAEFAYG 464
Query: 245 AGHVQPNLAMDPGLVYDLTANDYLNFLCTLGYNKKEIFWFSKNYTYTCPNHTISLVDFNY 304
+GHV P A+ PGLVYD +DY+ FLC GYN + + + +Y+ +T + D NY
Sbjct: 465 SGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNY 524
Query: 305 PSISV---PKLSGSITVTRKVKNVGSP-GTYQALLKSPKGVSVTIAPKSLKFINVGEEKS 360
PS + P + + R + +V TY+A++ +P+G+++++ P L F +G+ KS
Sbjct: 525 PSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKS 584
Query: 361 FKVIIKAQNASVTKDYAFGELIWSDDKHHQVRSPIVVKAV 400
F + ++ S+ L+WSD H VRSPI + ++
Sbjct: 585 FTLTVR---GSIKGFVVSASLVWSDGV-HYVRSPITITSL 620
|
| >3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Length = 649 | Back alignment and structure |
|---|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 | Back alignment and structure |
|---|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 | Back alignment and structure |
|---|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 | Back alignment and structure |
|---|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 | Back alignment and structure |
|---|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 | Back alignment and structure |
|---|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 | Back alignment and structure |
|---|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 | Back alignment and structure |
|---|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 | Back alignment and structure |
|---|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 | Back alignment and structure |
|---|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 | Back alignment and structure |
|---|
| >4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 | Back alignment and structure |
|---|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 | Back alignment and structure |
|---|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 | Back alignment and structure |
|---|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 | Back alignment and structure |
|---|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 | Back alignment and structure |
|---|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 | Back alignment and structure |
|---|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 | Back alignment and structure |
|---|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 | Back alignment and structure |
|---|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 | Back alignment and structure |
|---|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 | Back alignment and structure |
|---|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 | Back alignment and structure |
|---|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 | Back alignment and structure |
|---|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 | Back alignment and structure |
|---|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 | Back alignment and structure |
|---|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 | Back alignment and structure |
|---|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 | Back alignment and structure |
|---|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 | Back alignment and structure |
|---|
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 | Back alignment and structure |
|---|
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 | Back alignment and structure |
|---|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 400 | |||
| 3i6s_A | 649 | Subtilisin-like protease; PA-domain, FN3-domain, h | 100.0 | |
| 3vta_A | 621 | Cucumisin; subtilisin-like fold, serine protease, | 100.0 | |
| 1xf1_A | 926 | C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St | 100.0 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 99.95 | |
| 3lxu_X | 1354 | Tripeptidyl-peptidase 2; spindle complex, aminopep | 99.91 | |
| 3afg_A | 539 | Subtilisin-like serine protease; propeptide, therm | 99.88 | |
| 1r0r_E | 274 | Subtilisin carlsberg; high resolution, serine prot | 99.82 | |
| 1to2_E | 281 | Subtilisin BPN'; serine protease, hydrolase; HET: | 99.82 | |
| 4h6x_A | 357 | Thiazoline oxidase/subtilisin-like protease; hydro | 99.82 | |
| 1gci_A | 269 | Subtilisin; hydrolase, serine protease; 0.78A {Bac | 99.82 | |
| 1wmd_A | 434 | Protease; alpha-beta hydrolase fold, jelly-roll be | 99.81 | |
| 2iy9_A | 347 | SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col | 99.8 | |
| 4h6w_A | 306 | N-terminal cyanobactin protease; hydrolase; 2.45A | 99.79 | |
| 1r6v_A | 671 | Subtilisin-like serine protease; sandwich domain, | 99.79 | |
| 1dbi_A | 280 | AK.1 serine protease; hydrolase; 1.80A {Bacillus S | 99.79 | |
| 2x8j_A | 327 | Intracellular subtilisin protease; hydrolase, seri | 99.78 | |
| 2oxa_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 99.78 | |
| 3zxy_A | 282 | Subtilisin-like protein; hydrolase; 1.58A {Prochlo | 99.78 | |
| 1thm_A | 279 | Thermitase; hydrolase(serine protease); 1.37A {The | 99.77 | |
| 2z2z_A | 395 | TK-subtilisin precursor; thermococcus kodakaraensi | 99.77 | |
| 2ixt_A | 310 | 36KDA protease; serine protease, sphericase, subti | 99.77 | |
| 3lpc_A | 340 | APRB2; protease, subtilase, virulence factor, hydr | 99.76 | |
| 3t41_A | 471 | Epidermin leader peptide processing serine protea; | 99.76 | |
| 2z30_A | 320 | TK-subtilisin; thermococcus kodakaraensis, hydrola | 99.75 | |
| 1p8j_A | 471 | Furin precursor; prohormone convertase, SPC1, PACE | 99.72 | |
| 2id4_A | 503 | Kexin; KEX2, kexin, furin, proprotein, prohormone, | 99.71 | |
| 3hjr_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 99.7 | |
| 1sh7_A | 284 | Extracellular subtilisin-like serine proteinase; c | 99.67 | |
| 2pwa_A | 279 | Proteinase K; structure, alanine boronic acid, hyd | 99.67 | |
| 4dzt_A | 276 | Aqualysin-1, aqualysin-I; serine protease, calcium | 99.66 | |
| 2b6n_A | 278 | Proteinase K; S binding, substrate specificity, pr | 99.64 | |
| 2qtw_B | 546 | Proprotein convertase subtilisin/kexin type 9; cor | 99.63 | |
| 3f7m_A | 279 | Alkaline serine protease VER112; verticillium psal | 99.6 | |
| 2p4e_P | 692 | Proprotein convertase subtilisin/kexin type 9; pro | 99.58 | |
| 3icu_A | 194 | E3 ubiquitin-protein ligase RNF128; E3 ligase, ene | 99.45 | |
| 1ga6_A | 372 | Serine-carboxyl proteinase; serine-carboxyl protei | 98.63 | |
| 1t1e_A | 552 | Kumamolisin; proenzyme, prosubtilase, activation m | 98.54 | |
| 2ek8_A | 421 | Aminopeptidase; metalloproteinase, hydrolase; 1.80 | 98.44 | |
| 3iib_A | 444 | Peptidase M28; YP_926796.1, structural genomics, J | 98.1 | |
| 3kas_A | 640 | Transferrin receptor protein 1; transferrin recept | 98.08 | |
| 3fed_A | 707 | Glutamate carboxypeptidase III; metallopeptidase, | 98.07 | |
| 2ys4_A | 122 | Hydrocephalus-inducing protein homolog; hydin, PAP | 96.26 | |
| 3edy_A | 544 | Tripeptidyl-peptidase 1; protease, TPP1, sedolisin | 95.48 | |
| 2e6j_A | 112 | Hydin protein; PAPD, structural genomics, NPPSFA, | 91.32 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 91.3 | |
| 3qbt_B | 140 | Inositol polyphosphate 5-phosphatase OCRL-1; prote | 89.86 | |
| 2r39_A | 118 | FIXG-related protein; structural GE PSI-2, protein | 88.27 | |
| 2qsv_A | 220 | Uncharacterized protein; MCSG, structural genomics | 84.13 |
| >3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-82 Score=670.48 Aligned_cols=375 Identities=35% Similarity=0.556 Sum_probs=332.9
Q ss_pred CCeeeEEecccchhhccCcccccCCCCCCCCCCCc--cceEEEEeecCCChHHHHHHHHHcCCeEEEEEecCCCCCCCCC
Q 015812 7 DKLFPFISAEDAKLANASVENALICKKGTLDPKKV--KGKILVCLDVNTRSVDKGLQAALAGAAGIVLVNLPEYGNDRMT 84 (400)
Q Consensus 7 ~~~~pLv~~~d~~~~~~~~~~~~~C~~~~~~~~~v--~GKIVl~~rg~~~~~~k~~~a~~aGA~gvIi~n~~~~~~~~~~ 84 (400)
.+.+||+|+.+ .+.|.+..++..++ +||||||+||.|.+.+|..+++++||+|+||+|+.. ....
T Consensus 256 ~~~~plv~~~~----------~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~---~~~~ 322 (649)
T 3i6s_A 256 VRDSPVIYNKT----------LSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPG---VFRS 322 (649)
T ss_dssp EEEEEEECCTT----------TTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGG---GGGC
T ss_pred CcceeeEeccc----------ccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCcc---cccc
Confidence 35689998762 46899888888777 999999999999999999999999999999999862 4455
Q ss_pred CCCccceeecChhhhhhhhhhhccccccccccccCCccCCCCCCCCCcccCCCCCCCCCCCCCCCcEEcCCCceeecccC
Q 015812 85 DPHVLPASDINFNDSVSLFSYITSIKHPVGYITRPTTEFGTKPAPFMAAFSSKGPNIITPEILKPDITAPGENIIAAYTE 164 (400)
Q Consensus 85 ~~~~iP~~~I~~~dG~~l~~~i~s~~~~tatI~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~I~sa~~~ 164 (400)
+.+.+|+++|+.++|+.|++|++++++++++|.+..++.+..+++.++.||||||+...+++|||||+|||++|+++|+.
T Consensus 323 ~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~ 402 (649)
T 3i6s_A 323 ATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPP 402 (649)
T ss_dssp CCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCT
T ss_pred ccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEeecCC
Confidence 67889999999999999999999999999999999888888899999999999999877899999999999999999998
Q ss_pred CCCCCCcCCCC-CCCCceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHcccccCCCcchhhccc-cCCCCCCCC
Q 015812 165 AQSPTHLNYDK-RRSPFNSVSGTSMSCPHISGIASLLKILHPDWSPAAIQSAIMTTASTHDNNKQQILNA-SFAEATPFS 242 (400)
Q Consensus 165 ~~~~~~~~~~~-~~~~~~~~sGTSmAaP~vAG~aALl~~~~p~~s~~~ik~~l~~tA~~~~~~~~~~~~~-~~~~~~~~~ 242 (400)
.........+. ....|..+||||||||||||+||||||+||+|+|++||++||+||+++++.++++.+. .+.++++++
T Consensus 403 ~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~ 482 (649)
T 3i6s_A 403 NVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLD 482 (649)
T ss_dssp TSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHH
T ss_pred CCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccccCCcCCcCC
Confidence 54433332222 3478999999999999999999999999999999999999999999999988888775 456788999
Q ss_pred CCCceecccccCCCceeecCCchhhhhhhhcCCCCcceeEeecccceec--cCCCCCCcccCCCCeEEeec-CCCe----
Q 015812 243 YGAGHVQPNLAMDPGLVYDLTANDYLNFLCTLGYNKKEIFWFSKNYTYT--CPNHTISLVDFNYPSISVPK-LSGS---- 315 (400)
Q Consensus 243 ~G~G~vn~~~A~~~~lv~~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~--c~~~~~~~~~ln~ps~~v~~-~~~~---- 315 (400)
||+|+|||.+|++||||||++.+||++|||++||+.++|+.|++. +++ |+. ...+||||||++.+ +.+.
T Consensus 483 ~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~-~~~~~C~~---~~~~lNyPs~~~~~~~~~~~~~~ 558 (649)
T 3i6s_A 483 MGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARS-SASHNCSN---PSADLNYPSFIALYSIEGNFTLL 558 (649)
T ss_dssp HTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTT-TSCC-CCC---CCCCCCCSSEEEEECCSSCCCCE
T ss_pred CCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecC-CCcCCCCC---chhhcCCCcEEeecccCCCCccc
Confidence 999999999999999999999999999999999999999999987 777 975 26799999999987 5556
Q ss_pred -EEEEEEEEEcCC-CceEEEEEeCCCCceEEEecceeEeccCCcEEEEEEEEEEccCCCCCCeEEEEEEEEc--CCCcEE
Q 015812 316 -ITVTRKVKNVGS-PGTYQALLKSPKGVSVTIAPKSLKFINVGEEKSFKVIIKAQNASVTKDYAFGELIWSD--DKHHQV 391 (400)
Q Consensus 316 -~t~~rtvtnvg~-~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~G~i~~~~--~~~~~v 391 (400)
++++|||||||+ .++|++++..|.|++|+|+|++|+|++.+|+++|+|+|+.. ....+.|.||+|+|++ +. |.|
T Consensus 559 ~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~-~~~~~~~~fg~l~w~~~~~~-h~v 636 (649)
T 3i6s_A 559 EQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYI-GDEGQSRNVGSITWVEQNGN-HSV 636 (649)
T ss_dssp EEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEEC-CC---CCCEEEEEEEETTSC-CEE
T ss_pred eEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEec-ccCCCceEEEEEEEEcCCCC-eEE
Confidence 899999999999 99999999999999999999999998899999999999973 3345568999999999 77 999
Q ss_pred EeeEEEEEC
Q 015812 392 RSPIVVKAV 400 (400)
Q Consensus 392 r~P~~~~~~ 400 (400)
|+||+|++.
T Consensus 637 rsPi~v~~~ 645 (649)
T 3i6s_A 637 RSPIVTSPI 645 (649)
T ss_dssp EEEEEEEEC
T ss_pred EEeEEEEEc
Confidence 999999863
|
| >3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} | Back alignment and structure |
|---|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* | Back alignment and structure |
|---|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* | Back alignment and structure |
|---|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... | Back alignment and structure |
|---|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... | Back alignment and structure |
|---|
| >4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A | Back alignment and structure |
|---|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* | Back alignment and structure |
|---|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A | Back alignment and structure |
|---|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} | Back alignment and structure |
|---|
| >4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} | Back alignment and structure |
|---|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 | Back alignment and structure |
|---|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 | Back alignment and structure |
|---|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* | Back alignment and structure |
|---|
| >3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A | Back alignment and structure |
|---|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E | Back alignment and structure |
|---|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A | Back alignment and structure |
|---|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* | Back alignment and structure |
|---|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A | Back alignment and structure |
|---|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A | Back alignment and structure |
|---|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A | Back alignment and structure |
|---|
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 | Back alignment and structure |
|---|
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* | Back alignment and structure |
|---|
| >3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} | Back alignment and structure |
|---|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* | Back alignment and structure |
|---|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... | Back alignment and structure |
|---|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} | Back alignment and structure |
|---|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} | Back alignment and structure |
|---|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A | Back alignment and structure |
|---|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A | Back alignment and structure |
|---|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} | Back alignment and structure |
|---|
| >3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* | Back alignment and structure |
|---|
| >1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A | Back alignment and structure |
|---|
| >2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* | Back alignment and structure |
|---|
| >3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} | Back alignment and structure |
|---|
| >3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A | Back alignment and structure |
|---|
| >3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... | Back alignment and structure |
|---|
| >2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* | Back alignment and structure |
|---|
| >2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* | Back alignment and structure |
|---|
| >3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
| >2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 400 | ||||
| d1v6ca_ | 435 | c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud | 2e-25 | |
| d1r6va_ | 671 | c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni | 2e-12 | |
| d2ixta1 | 309 | c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus | 5e-12 | |
| d1r0re_ | 274 | c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls | 6e-11 | |
| d1gcia_ | 269 | c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: | 6e-11 | |
| d1to2e_ | 281 | c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie | 3e-10 | |
| d1p8ja2 | 334 | c.41.1.1 (A:109-442) Furin, N-terminal domain {Mou | 6e-10 | |
| d1wmda2 | 318 | c.41.1.1 (A:1-318) Alkaline serine protease kp-43, | 4e-09 | |
| d2pwaa1 | 279 | c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirach | 2e-08 | |
| d2id4a2 | 339 | c.41.1.1 (A:122-460) Kexin, N-terminal domain {Bak | 1e-07 | |
| d1dbia_ | 280 | c.41.1.1 (A:) Thermostable serine protease {Bacill | 4e-05 | |
| d1thma_ | 279 | c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar | 2e-04 |
| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease Apa1 species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]
Score = 105 bits (261), Expect = 2e-25
Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 28/213 (13%)
Query: 67 AAGIVLVNLPEYGNDRMTDPHVLPASDINFNDSVSLFSYITSIKHPVGYITRPTTEFGTK 126
+ +N G + S N + + L + + I
Sbjct: 243 SYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAG 302
Query: 127 PAPFMAAFSSKGPNIITPEIL--KPDITAPGENIIAAYTEAQ----SPTHLNYDKRRSPF 180
+ +S P + P ++ DIT P ++ A A + ++ +
Sbjct: 303 AKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDY 362
Query: 181 NSVSGTSMSCPHISGIASLLKILHPDWSPAAIQSAIMTTASTHDNNKQQILNASFAEATP 240
+GTSM+ PH+SG+A+L+ HP+ S + +++A+ TA
Sbjct: 363 EYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSV-----------AGRD 411
Query: 241 FSYGAGHVQPNLAMDPGLVYDLTANDYLNFLCT 273
G G + A YL+ CT
Sbjct: 412 NQTGYGMINAVAAK-----------AYLDESCT 433
|
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 | Back information, alignment and structure |
|---|
| >d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Length = 309 | Back information, alignment and structure |
|---|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 | Back information, alignment and structure |
|---|
| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 | Back information, alignment and structure |
|---|
| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 | Back information, alignment and structure |
|---|
| >d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 334 | Back information, alignment and structure |
|---|
| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Length = 318 | Back information, alignment and structure |
|---|
| >d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Length = 279 | Back information, alignment and structure |
|---|
| >d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 339 | Back information, alignment and structure |
|---|
| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 | Back information, alignment and structure |
|---|
| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 400 | |||
| d1r6va_ | 671 | Fervidolysin {Fervidobacterium pennivorans [TaxId: | 99.79 | |
| d1r0re_ | 274 | Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 | 99.78 | |
| d1v6ca_ | 435 | Alkaline serine protease Apa1 {Pseudoalteromonas s | 99.76 | |
| d1gcia_ | 269 | Subtilisin {Bacillus lentus [TaxId: 1467]} | 99.76 | |
| d1to2e_ | 281 | Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' | 99.76 | |
| d1thma_ | 279 | Thermitase {Thermoactinomyces vulgaris [TaxId: 202 | 99.74 | |
| d1wmda2 | 318 | Alkaline serine protease kp-43, N-terminal domain | 99.7 | |
| d1dbia_ | 280 | Thermostable serine protease {Bacillus sp., AK.1 [ | 99.7 | |
| d2ixta1 | 309 | Sphericase {Bacillus sphaericus [TaxId: 1421]} | 99.69 | |
| d2pwaa1 | 279 | Proteinase K {Fungus (Tritirachium album), strain | 99.66 | |
| d2id4a2 | 339 | Kexin, N-terminal domain {Baker's yeast (Saccharom | 99.6 | |
| d1p8ja2 | 334 | Furin, N-terminal domain {Mouse (Mus musculus) [Ta | 99.59 | |
| d1t1ga_ | 357 | Serine-carboxyl proteinase, SCP {Bacillus novosp. | 99.11 | |
| d1ga6a_ | 369 | Serine-carboxyl proteinase, SCP {Pseudomonas sp., | 98.83 | |
| d1de4c2 | 193 | Transferrin receptor ectodomain, apical domain {Hu | 98.4 | |
| d3bi1a2 | 233 | Glutamate carboxypeptidase II {Human (Homo sapiens | 98.18 | |
| d1w8oa1 | 103 | Sialidase, "linker" domain {Micromonospora viridif | 97.14 |
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Fervidolysin species: Fervidobacterium pennivorans [TaxId: 93466]
Probab=99.79 E-value=2e-20 Score=197.05 Aligned_cols=110 Identities=25% Similarity=0.366 Sum_probs=90.7
Q ss_pred CCcccCCCCCCCCCCCCCCCcEEcCCCceeecccCCCCCCC-----cCCCCCCCCceeeccccchhhHHHHHHHHHHhhC
Q 015812 130 FMAAFSSKGPNIITPEILKPDITAPGENIIAAYTEAQSPTH-----LNYDKRRSPFNSVSGTSMSCPHISGIASLLKILH 204 (400)
Q Consensus 130 ~~a~fSs~Gp~~~~~~~~KPdi~APG~~I~sa~~~~~~~~~-----~~~~~~~~~~~~~sGTSmAaP~vAG~aALl~~~~ 204 (400)
.++.||||||.. ||+|||++|+++++....... .......+.|..++|||||||||||++|||+|++
T Consensus 327 ~~a~fS~~g~~~--------dv~APG~~i~st~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VaG~aALl~~~~ 398 (671)
T d1r6va_ 327 RVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKF 398 (671)
T ss_dssp EECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHC
T ss_pred eeeeccCCCCCc--------eEEecCCCeEeecCCCCccccccccccccccCCCeeeeecCHHHHHHHHHHHHHHHHHHC
Confidence 689999999976 999999999999875332111 1112235789999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcccccCCCcchhhccccCCCCCCCCCCCceecccccCCCce
Q 015812 205 PDWSPAAIQSAIMTTASTHDNNKQQILNASFAEATPFSYGAGHVQPNLAMDPGL 258 (400)
Q Consensus 205 p~~s~~~ik~~l~~tA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~l 258 (400)
|+|++.+||++|++||++++.. .....||+|+||+.+|++..+
T Consensus 399 p~lt~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G~vna~~Av~~~~ 441 (671)
T d1r6va_ 399 PNAKPWQIRKLLENTAFDFNGN-----------GWDHDTGYGLVKLDAALQGPL 441 (671)
T ss_dssp TTCCHHHHHHHHHHHCBCSSSS-----------SCBTTTBTCBCCHHHHHHCCC
T ss_pred CCCCHHHHHHHHHhhCccCCCC-----------CCCCCcccChhCHHHHhhCcC
Confidence 9999999999999999887432 245789999999999997544
|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} | Back information, alignment and structure |
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| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} | Back information, alignment and structure |
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| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} | Back information, alignment and structure |
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| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} | Back information, alignment and structure |
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| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} | Back information, alignment and structure |
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| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} | Back information, alignment and structure |
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| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} | Back information, alignment and structure |
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| >d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
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| >d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} | Back information, alignment and structure |
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| >d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} | Back information, alignment and structure |
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| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} | Back information, alignment and structure |
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| >d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
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