Citrus Sinensis ID: 015859

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIIDMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccccHHcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcEEEEEccccccccccccEEEEEEEcccccEEEEcccEEccccccccccccccccccccEEEEEEccEEEccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHHccccccccccEEEEEccccccccccccccccccccccHHHHHHccccccccccccccccccEEEEEEEEEEcccccccEEEccccccccccccccccccHHHHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHcccccccccHHHHHHHcHHHHEEHHcHHHcccccHHHcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccEEEEEEEccccEEEEEcccEEEcccHHccccccccccccccEEEEEEccEEEEcccccccccEEEEcccccccccccccccccccccHHHHHcccccccccccccHHHHHccccHHHHHHcccccccccccEEEEEccccccHHHHHHHccccEcccccccccccccccHccccccccccccEEEEEEEEEEHcccccHHHHEcccccccccccccccccHHHHHHccc
Coil and Loop (DISEMBL)
MAFLFQKFQEAVKTLaksptfardprqlqfEADMNRLFLYTSYNrlgrdaeeaDAEEIIDMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEilllpeknvpiessaqsnaaprrsglsfavgptarptdspvvpqtrqLTRTELSQRLKDAIGytldlkpsqipheeagqglflcgeanvgaviaiypgiiyspayyryipgyprvdaqnpylitrydgtvinaqpwgsgwdtrelwdgltlpeimpnskgaekGSDQFWKLLskpmdnkrggsgsemlerrnplalahfanhpakgmvpnvmicpydfpltekdmrpyipnisfgnaeevNMRRFGSFwfkwgsgsgsstpvLKTLALVATRAICDEEVLLNYRlsnskrrpvwyspvdeeedrrrws
Flexible Loop (DISEMBL)
MAFLFQKFQEAVktlaksptfardprqlqfeadmNRLFLYTSYNRLGRDAEEADAEEIIDMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIEssaqsnaaprrsGLSFAVgptarptdspvvpqtrqlTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTvinaqpwgsgwDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFAnhpakgmvpnVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLlnyrlsnskrrpvwyspvdeeedrrrws
Low Complexity Region (SEG)
MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRdaeeadaeeiidMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRfgsfwfkwgsgsgssTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS
Disordered region (IsUnstruct)
***************************LQFEADMNRLFLYTSYNRLG**************************VLDNIHSQIKRFCLSMDEILLLP*****************************************************DAIGYTLDLKP*QIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEI***************************************LALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWY*************
Disordered Region (DISOPRED)
**FLFQKFQEAVKTLAKS*T****PRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIIDMAG**************IHSQIKRFCLSMDEI******************************************************RLKDAIGYTLDLKPSQ**HEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPE********************************EMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWF*********TPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEE*******
Disordered Region (DISEMBL)
MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIIDMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIE************GLSFAVGP*************RQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDN*********LERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYS************
Disordered Region (DISPRO)
MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIIDMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPE*********************************PVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSK***KGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEED*****
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIIDMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	399	2.2.26 [Sep-21-2011]
Q5RBW0	273	SET domain-containing pro	yes	no	0.318	0.465	0.257	0.0006
Q8NE22	299	SET domain-containing pro	yes	no	0.340	0.454	0.25	0.0007

>sp|Q5RBW0|SETD9_PONAB SET domain-containing protein 9 OS=Pongo abelii GN=SETD9 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 36/163 (22%)

Query: 168 AGQGLFLC-GEANVGAVIAIYPGIIYS---PAYYRYIPGYPRVDAQNPYLITRYDGTVIN 223
           AG+G+F+  G    GAV+++YPG +Y    P +++ I         NP++    DG +I+
Sbjct: 108 AGKGVFVTKGLVPKGAVVSMYPGTVYQKYEPIFFQSIG--------NPFIFRCLDGVLID 159

Query: 224 AQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRN 283
               G         +G        +  G  K SD  W L S               E  N
Sbjct: 160 GNDKGISKVVYRSCNG-------RDRLGPLKMSDSTW-LTS---------------EIHN 196

Query: 284 PLALAHFANHPAKGMVPNVMICPYDFP-LTEKDMRPYIPNISF 325
           PLA+  + N+ +     NV    +D P +   +++ Y+PNI++
Sbjct: 197 PLAVGQYVNNCSNDRAANVCYQEFDVPAVFPIELKQYLPNIAY 239

Pongo abelii (taxid: 9601)

>sp|Q8NE22|SETD9_HUMAN SET domain-containing protein 9 OS=Homo sapiens GN=SETD9 PE=2 SV=2

 Score = 45.4 bits (106), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 36/172 (20%)

Query: 168 AGQGLFLC-GEANVGAVIAIYPGIIYS---PAYYRYIPGYPRVDAQNPYLITRYDGTVIN 223
           AG+G+F+  G    GAV+++YPG +Y    P +++ I         NP++    DG +I+
Sbjct: 134 AGKGVFVTKGLVPKGAVVSMYPGTVYQKYEPIFFQSI--------GNPFIFRCLDGVLID 185

Query: 224 AQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRN 283
               G         +G        +  G  K SD  W L S               E  N
Sbjct: 186 GNDKGISKVVYRSCNG-------RDRLGPLKMSDSTW-LTS---------------EIHN 222

Query: 284 PLALAHFANHPAKGMVPNVMICPYDFP-LTEKDMRPYIPNISFGNAEEVNMR 334
           PLA+  + N+ +     NV    +D P +   +++ Y+PNI++   ++  +R
Sbjct: 223 PLAVGQYVNNCSNDRAANVCYQEFDVPAVFPIELKQYLPNIAYSYDKQSPLR 274

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
225465688	405	PREDICTED: uncharacterized protein LOC10	1.0	0.985	0.748	1e-179
224083904	402	predicted protein [Populus trichocarpa]	1.0	0.992	0.746	1e-171
255558659	405	conserved hypothetical protein [Ricinus	1.0	0.985	0.701	1e-164
449464032	396	PREDICTED: uncharacterized protein LOC10	0.972	0.979	0.707	1e-164
297808317	398	hypothetical protein ARALYDRAFT_489175 [	0.989	0.992	0.666	1e-156
22327005	399	uncharacterized protein [Arabidopsis tha	0.994	0.994	0.660	1e-156
10177809	437	unnamed protein product [Arabidopsis tha	0.994	0.908	0.660	1e-156
356532231	402	PREDICTED: uncharacterized protein LOC10	0.989	0.982	0.682	1e-154
242062410	403	hypothetical protein SORBIDRAFT_04g02689	0.997	0.987	0.641	1e-150
357150341	402	PREDICTED: uncharacterized protein LOC10	0.997	0.990	0.650	1e-149

>gi|225465688|ref|XP_002272694.1| PREDICTED: uncharacterized protein LOC100251105 [Vitis vinifera]

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 303/405 (74%), Positives = 344/405 (84%), Gaps = 6/405 (1%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID 60
           MAFLFQKFQEAVKTLAKSP FARDPR LQFEAD+NRLFLYTSYNRLGR+A+EADAE IID
Sbjct: 1   MAFLFQKFQEAVKTLAKSPVFARDPRHLQFEADINRLFLYTSYNRLGRNADEADAENIID 60

Query: 61  MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPI--ESSAQSNAAPRRSGLS 118
           MAGKASL+DQQ+QV +NIHSQIK FC ++D +LL   KN+    ES  Q+ A PRRSGLS
Sbjct: 61  MAGKASLADQQKQVQENIHSQIKTFCNTLDGVLLPDSKNMNELPESCPQTKATPRRSGLS 120

Query: 119 FAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 178
           FAVG    P+D+  VPQT+ L R ELSQ LKD IGYTLDLKPSQIPH++AGQGLFL GEA
Sbjct: 121 FAVGRDGPPSDNSAVPQTKPLKRAELSQSLKDLIGYTLDLKPSQIPHKDAGQGLFLDGEA 180

Query: 179 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 238
           +VGAV+A+YPG+IY PAYY+YIPGYPRVDA NPYLITRYDGTVINAQPWG G +TRELWD
Sbjct: 181 DVGAVVALYPGVIYFPAYYQYIPGYPRVDAHNPYLITRYDGTVINAQPWGVGGETRELWD 240

Query: 239 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 298
           G ++ E+  N +G EKGSD+ WKLLSKPM+ K GGSG ++LERRNPLA AHFANHP+KGM
Sbjct: 241 GFSVTEVSANMQGDEKGSDRIWKLLSKPMEAKHGGSGCDVLERRNPLAFAHFANHPSKGM 300

Query: 299 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSS----TPVL 354
            PNVM+CPYDFPLTE+DMR YIPN+ FG+++EV M+R GSFWFK GS + S      PVL
Sbjct: 301 SPNVMVCPYDFPLTEQDMRAYIPNVLFGSSKEVKMKRLGSFWFKSGSSNKSELDAHVPVL 360

Query: 355 KTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
           KTL LVATRA+CDEEVLLNYRLSNSKRRP WY+PVDEEEDRRRWS
Sbjct: 361 KTLVLVATRALCDEEVLLNYRLSNSKRRPAWYTPVDEEEDRRRWS 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083904|ref|XP_002307167.1| predicted protein [Populus trichocarpa] gi|222856616|gb|EEE94163.1| predicted protein [Populus trichocarpa]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 300/402 (74%), Positives = 347/402 (86%), Gaps = 3/402 (0%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID 60
           MA LF KFQE VKTLAKSPTFAR+PR+ QFE DMNRLFL+TSYNRLG++AEEADAEEII+
Sbjct: 1   MASLFNKFQEFVKTLAKSPTFARNPREFQFETDMNRLFLFTSYNRLGKNAEEADAEEIIE 60

Query: 61  MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILL--LPEKNVPIESSAQSNAAPRRSGLS 118
           MA KAS++DQQ+QV +NIH QI  FC +M+EILL  L +++   E+ AQSNAAPRRSGLS
Sbjct: 61  MASKASVADQQKQVQENIHFQITNFCSAMNEILLPDLEKRSKKDEAPAQSNAAPRRSGLS 120

Query: 119 FAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 178
           FAVG +  P D P +P+T+QL+R+++SQ L+D IGYTLDLKPS IPH+EAG+GLFL GEA
Sbjct: 121 FAVGKSGPPIDRPAIPETKQLSRSKVSQSLRDEIGYTLDLKPSLIPHKEAGEGLFLSGEA 180

Query: 179 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 238
           +VG VIAIYPG+IYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINA PWGSG ++RE+WD
Sbjct: 181 DVGTVIAIYPGVIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINALPWGSGGESREVWD 240

Query: 239 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 298
           GLT+PEI  N +  EKG D+ W++LSKP++  R GS  ++LERRNPLALAHFANHPAKGM
Sbjct: 241 GLTVPEIRSNVQSVEKGQDRVWRMLSKPLEGTRVGSIGDVLERRNPLALAHFANHPAKGM 300

Query: 299 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGS-GSGSSTPVLKTL 357
            PNVMICPYDFPLTEKDMR +IPN+SFGN EEVNMRRFGSFWFK  +  S S  PVLKTL
Sbjct: 301 DPNVMICPYDFPLTEKDMRTFIPNVSFGNHEEVNMRRFGSFWFKSSAKNSVSDVPVLKTL 360

Query: 358 ALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
            LVATRA+C+EEVLLNYRLSN+KRRP WYSPVDEEEDRRRWS
Sbjct: 361 VLVATRALCNEEVLLNYRLSNTKRRPAWYSPVDEEEDRRRWS 402

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558659|ref|XP_002520354.1| conserved hypothetical protein [Ricinus communis] gi|223540452|gb|EEF42020.1| conserved hypothetical protein [Ricinus communis]

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 284/405 (70%), Positives = 334/405 (82%), Gaps = 6/405 (1%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFAR---DPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEE 57
           MAFLF KFQEAVKTLAKSPTFAR   +PRQLQF  D+NRLFLYTSYNRLGR+AE+AD EE
Sbjct: 1   MAFLFNKFQEAVKTLAKSPTFARFTREPRQLQFAIDINRLFLYTSYNRLGRNAEDADVEE 60

Query: 58  IIDMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILL--LPEKNVPIESSAQSNAAPRRS 115
           II+MA  +S++DQQ QV +NIHSQI+ FC SMDEILL  + ++N   E+ AQ +  PRRS
Sbjct: 61  IIEMASTSSVTDQQNQVQENIHSQIESFCTSMDEILLPDMMKRNELGEALAQLDPVPRRS 120

Query: 116 GLSFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLC 175
           GLS AVG +   T  P + +TR L   E+S RLK  IGYTL+LKPSQIPH+EAGQGLF+ 
Sbjct: 121 GLSLAVGKSTPSTGCPAITETRPLKSGEVSSRLKGLIGYTLNLKPSQIPHKEAGQGLFID 180

Query: 176 GEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRE 235
           GEA+VG+VIA YPG+IY+PAYYRYIPGYPRVDA NPYLITRYDGTVINAQPWG G +TRE
Sbjct: 181 GEADVGSVIAFYPGVIYAPAYYRYIPGYPRVDACNPYLITRYDGTVINAQPWGFGGETRE 240

Query: 236 LWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPA 295
            W+GL +P++  + +  EKG D++WK+LSKP++    GS +E+LE+RNPLALAHFANHPA
Sbjct: 241 AWNGLLVPDVRHSVQIREKGVDRWWKMLSKPLEGTEFGSAAEVLEQRNPLALAHFANHPA 300

Query: 296 KGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKW-GSGSGSSTPVL 354
           K + PNVMICPYDFPLTEK+MR YIPNI FGN+EEVNMRRFGSFWF+    GSGS  P+L
Sbjct: 301 KDIAPNVMICPYDFPLTEKNMRTYIPNIIFGNSEEVNMRRFGSFWFRSKAKGSGSGIPIL 360

Query: 355 KTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
           K L LVATRA+ +EEVLLNYRLS+SKRRP WY+PVDEEEDRRRWS
Sbjct: 361 KALVLVATRALSNEEVLLNYRLSHSKRRPEWYTPVDEEEDRRRWS 405

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464032|ref|XP_004149733.1| PREDICTED: uncharacterized protein LOC101219994 [Cucumis sativus]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 288/407 (70%), Positives = 332/407 (81%), Gaps = 19/407 (4%)

Query: 1   MAFLFQKFQEAVKTLAKSPTF------ARDPRQLQFEADMNRLFLYTSYNRLGRDAEEAD 54
           MAFLFQKFQEAVK LAK+P F      ARDPR+LQFEADMNRLFL+TSYNRLG DA EAD
Sbjct: 1   MAFLFQKFQEAVKVLAKNPLFTKNPLFARDPRRLQFEADMNRLFLFTSYNRLGMDATEAD 60

Query: 55  AEEIIDMAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRR 114
           AEEIIDMA KAS +DQQ+QV +NIHSQ+K FC+ MD ILL  E   P ES  +S  A R+
Sbjct: 61  AEEIIDMASKASFADQQKQVQENIHSQVKSFCMHMDGILLPDE---PAESPEKSKDAVRK 117

Query: 115 SGLSFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFL 174
           SGLSFAVG T        +P TR L R+ELSQ+LKD IGYTLD+KPS+IPH++AGQGLF+
Sbjct: 118 SGLSFAVGRTN------TIPTTRPLGRSELSQQLKDEIGYTLDIKPSRIPHKDAGQGLFI 171

Query: 175 CGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTR 234
            GEA+VG++IAIYPG++YSPA+Y+YIPGYPRVDAQNPYLITRYDGTVINAQPWG G DTR
Sbjct: 172 DGEADVGSIIAIYPGVVYSPAHYQYIPGYPRVDAQNPYLITRYDGTVINAQPWGLGADTR 231

Query: 235 ELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHP 294
           E+W GLT+P   P  +G EK SD+ W++LSKP++ KR   G + +ERRNPLA AHFANHP
Sbjct: 232 EVWHGLTVPNSNPTKQGDEK-SDRLWRMLSKPLEAKRVQHGGDAIERRNPLAFAHFANHP 290

Query: 295 AKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSG--SGSSTP 352
           AK MVPNVM+CPYDFPLTEKDMR YIPN+   N EEV M+RFGSFWFK G    +GS TP
Sbjct: 291 AKDMVPNVMLCPYDFPLTEKDMRVYIPNVPVAN-EEVGMKRFGSFWFKSGRSRINGSDTP 349

Query: 353 VLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
           +LKT+ LVATRA+C+EEVLLNYRLSNSKRRP WY+PVDE EDRRRWS
Sbjct: 350 ILKTIVLVATRALCNEEVLLNYRLSNSKRRPSWYTPVDEGEDRRRWS 396

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808317|ref|XP_002872042.1| hypothetical protein ARALYDRAFT_489175 [Arabidopsis lyrata subsp. lyrata] gi|297317879|gb|EFH48301.1| hypothetical protein ARALYDRAFT_489175 [Arabidopsis lyrata subsp. lyrata]

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 268/402 (66%), Positives = 326/402 (81%), Gaps = 7/402 (1%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID 60
           MA LF KFQ+AV  LAKS TFA++PRQLQFEAD+N+LF+YTSY RLGR+AEE DAEEII+
Sbjct: 1   MATLFNKFQQAVGVLAKSTTFAKNPRQLQFEADVNKLFMYTSYYRLGREAEETDAEEIIE 60

Query: 61  MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAP-RRSGLSF 119
           MAGKA+LS+QQ+QV +NIH Q++ FC  MD ILL   +N   ES +QS + P RRSGL+F
Sbjct: 61  MAGKATLSEQQKQVQENIHYQVENFCSLMDGILLPDVRNN--ESGSQSTSPPPRRSGLTF 118

Query: 120 AVGPT-ARPT-DSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGE 177
           A+G   A P  D+P+VP+T+ L   E+SQRL D +GYTL++KPS IPH++AGQG F+ GE
Sbjct: 119 AIGSNNAFPAADTPLVPETKPLKLNEVSQRLMDQMGYTLEIKPSVIPHKDAGQGCFIKGE 178

Query: 178 ANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELW 237
           A+VG V+A YPG+IYSPA+YRYIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE+W
Sbjct: 179 ADVGTVLAFYPGVIYSPAFYRYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREVW 238

Query: 238 DGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKG 297
           +G   P +  NSK AE GSD+ WK LSKP++    G   ++LERRNPLA  H ANHPAK 
Sbjct: 239 NGSYTPAVKANSKAAENGSDRLWKALSKPLEG--SGEAKDVLERRNPLAFGHLANHPAKE 296

Query: 298 MVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTL 357
           M PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+RFGSFWFK GS +G   PVLKTL
Sbjct: 297 MTPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTL 356

Query: 358 ALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
            LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct: 357 VLVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 398

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327005|ref|NP_197711.2| uncharacterized protein [Arabidopsis thaliana] gi|18491157|gb|AAL69481.1| unknown protein [Arabidopsis thaliana] gi|20258933|gb|AAM14182.1| unknown protein [Arabidopsis thaliana] gi|332005749|gb|AED93132.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 265/401 (66%), Positives = 322/401 (80%), Gaps = 4/401 (0%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID 60
           MA LF KFQ+AV  LAKS TFA++PRQLQFEAD+N+LF+YTSYNRLGR+AEE DAEEII+
Sbjct: 1   MATLFNKFQQAVGVLAKSTTFAKNPRQLQFEADVNKLFMYTSYNRLGREAEETDAEEIIE 60

Query: 61  MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
           MAGKA+LS+QQ+QV +NIH Q+++FC  MD ILL   +     S + S   PRRSGL+FA
Sbjct: 61  MAGKATLSEQQKQVQENIHYQVEKFCSLMDGILLPDVRRNESGSQSTSPRPPRRSGLTFA 120

Query: 121 VGPT-ARP-TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 178
           +G   A P  D P+VP+T+ L   ++SQRL D +GYTL+ KPS IPH++AGQG F+ GEA
Sbjct: 121 IGSNNAFPHADQPLVPETKPLKLNDVSQRLMDQMGYTLETKPSVIPHKDAGQGCFIKGEA 180

Query: 179 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 238
           +VG V+A YPG+IYSPA+Y+YIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE W+
Sbjct: 181 DVGTVLAFYPGVIYSPAFYKYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREAWN 240

Query: 239 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 298
           G   P +  N+K AE GSD+ WK LSKP++    G G E+LERRNPLA  H ANHPAK M
Sbjct: 241 GSYTPAVKANTKTAENGSDRLWKALSKPLEG--SGKGKEVLERRNPLAFGHLANHPAKEM 298

Query: 299 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLA 358
            PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+RFGSFWFK GS +G   PVLKTL 
Sbjct: 299 TPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTLV 358

Query: 359 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
           LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct: 359 LVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 399

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10177809|dbj|BAB11175.1| unnamed protein product [Arabidopsis thaliana]

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 265/401 (66%), Positives = 322/401 (80%), Gaps = 4/401 (0%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID 60
           MA LF KFQ+AV  LAKS TFA++PRQLQFEAD+N+LF+YTSYNRLGR+AEE DAEEII+
Sbjct: 39  MATLFNKFQQAVGVLAKSTTFAKNPRQLQFEADVNKLFMYTSYNRLGREAEETDAEEIIE 98

Query: 61  MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
           MAGKA+LS+QQ+QV +NIH Q+++FC  MD ILL   +     S + S   PRRSGL+FA
Sbjct: 99  MAGKATLSEQQKQVQENIHYQVEKFCSLMDGILLPDVRRNESGSQSTSPRPPRRSGLTFA 158

Query: 121 VGPT-ARP-TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 178
           +G   A P  D P+VP+T+ L   ++SQRL D +GYTL+ KPS IPH++AGQG F+ GEA
Sbjct: 159 IGSNNAFPHADQPLVPETKPLKLNDVSQRLMDQMGYTLETKPSVIPHKDAGQGCFIKGEA 218

Query: 179 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 238
           +VG V+A YPG+IYSPA+Y+YIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE W+
Sbjct: 219 DVGTVLAFYPGVIYSPAFYKYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREAWN 278

Query: 239 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 298
           G   P +  N+K AE GSD+ WK LSKP++    G G E+LERRNPLA  H ANHPAK M
Sbjct: 279 GSYTPAVKANTKTAENGSDRLWKALSKPLEG--SGKGKEVLERRNPLAFGHLANHPAKEM 336

Query: 299 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLA 358
            PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+RFGSFWFK GS +G   PVLKTL 
Sbjct: 337 TPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTLV 396

Query: 359 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
           LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct: 397 LVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 437

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532231|ref|XP_003534677.1| PREDICTED: uncharacterized protein LOC100782005 [Glycine max]

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 277/406 (68%), Positives = 321/406 (79%), Gaps = 11/406 (2%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID 60
           MA LFQKFQEAVKTLAK P+F +DPRQLQFEAD+NRLFLY SYN LG++A+EA AEEII+
Sbjct: 1   MALLFQKFQEAVKTLAKRPSFTKDPRQLQFEADINRLFLYLSYNHLGKNADEAHAEEIIE 60

Query: 61  MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
           MA KAS +DQQ QV +N+HSQIK FC  MDEILL  EK V        N  PRRSGL FA
Sbjct: 61  MASKASFADQQMQVQENVHSQIKTFCTFMDEILLPNEKMV--NEHQLQNTVPRRSGLGFA 118

Query: 121 VGPTARP--TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 178
           VG    P        P+TR L++  +SQ LKD +GYT+++ PSQIPH++AGQGLFL G  
Sbjct: 119 VGSRNDPPLAFGAASPKTRPLSQAVVSQNLKDQLGYTVNVTPSQIPHKDAGQGLFLDGTV 178

Query: 179 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 238
           +VGAV+A YPGI+YSPAYYRYIPGYP+VD  NPYLITRYDG VINAQPWGSG D RELW+
Sbjct: 179 DVGAVVAFYPGIVYSPAYYRYIPGYPKVDTLNPYLITRYDGNVINAQPWGSGGDNRELWN 238

Query: 239 GLTLPEIMPNSKGA--EKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAK 296
           G    EI P+ KGA  EKGS++FWKLLSKP++  +GG+ +E++ERRNPLALAHFANHP K
Sbjct: 239 GRKTGEIKPDVKGAEPEKGSERFWKLLSKPLEGYQGGN-NEVIERRNPLALAHFANHPPK 297

Query: 297 GMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFK---WGSGSGSSTPV 353
           G+ PNVMICPYDFPLTE +MR YIPN+ FGNA EVNMRRFGSFWFK       SGS+ P 
Sbjct: 298 GVQPNVMICPYDFPLTESNMRVYIPNVLFGNA-EVNMRRFGSFWFKSGGGSRNSGSNVPT 356

Query: 354 LKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
           LKTL L+ATR + DEE+ LNYRLSN+KRRP WY+PVDEEEDRRRWS
Sbjct: 357 LKTLVLIATRPLQDEELFLNYRLSNTKRRPEWYNPVDEEEDRRRWS 402

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242062410|ref|XP_002452494.1| hypothetical protein SORBIDRAFT_04g026890 [Sorghum bicolor] gi|241932325|gb|EES05470.1| hypothetical protein SORBIDRAFT_04g026890 [Sorghum bicolor]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 259/404 (64%), Positives = 314/404 (77%), Gaps = 6/404 (1%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID 60
           MA LF K QEA++T+AKSP FARDPR LQFEAD+NRLFLYTSY+RLG +AEE DAEEIID
Sbjct: 1   MASLFNKIQEAIRTIAKSPMFARDPRHLQFEADVNRLFLYTSYSRLGENAEEKDAEEIID 60

Query: 61  MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
           +A KAS++DQQ+QV +N+H Q++  C SMD IL     N P +  ++++   RRSGLSFA
Sbjct: 61  LASKASVADQQKQVQENVHYQLRHMCQSMDNILCPDTTNDPSKEPSEAHNHSRRSGLSFA 120

Query: 121 VGPTARPT-DSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEAN 179
           VG  A     S V+P TR LTR ELS++ +D  GYTLD+ PS IPH++AGQGLFL G+AN
Sbjct: 121 VGGAASTNKQSAVIPATRPLTRAELSKKFRDHFGYTLDIGPSGIPHKDAGQGLFLSGKAN 180

Query: 180 VGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDG 239
           VGAV+AIYPG+IYSPAYYRYIPGYPR+D  N YLITRYDGT+I+A+PW  G +TRELWDG
Sbjct: 181 VGAVLAIYPGVIYSPAYYRYIPGYPRIDVCNNYLITRYDGTIIDAKPWYFGGETRELWDG 240

Query: 240 LTLPEI--MPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKG 297
             L +   MP  KG+E  SD+ W++LSKP++     +  E+LERRNPLA  HFANHP KG
Sbjct: 241 SDLVDYNAMP-PKGSENNSDRVWRMLSKPLEKSVRENFGEVLERRNPLAFGHFANHPPKG 299

Query: 298 MVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSS--TPVLK 355
             PNVMICPYDFPLTEK+MR YIPN++FG  E + M+RFGSF+FK G     +  + VLK
Sbjct: 300 SSPNVMICPYDFPLTEKNMRVYIPNVTFGGEETIKMKRFGSFYFKSGGSDNQAGDSLVLK 359

Query: 356 TLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
           TL LV+TR+ICDEE+ LNYR SNSKRRP WYSPVDEEED+RRWS
Sbjct: 360 TLVLVSTRSICDEELFLNYRYSNSKRRPEWYSPVDEEEDKRRWS 403

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357150341|ref|XP_003575426.1| PREDICTED: uncharacterized protein LOC100822461 [Brachypodium distachyon]

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/403 (65%), Positives = 306/403 (75%), Gaps = 5/403 (1%)

Query: 1   MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID 60
           MAFLF KFQEA++TLAK+P FARDPR LQF+AD+NRLFLYTSY RLG  +EE DAEEIID
Sbjct: 1   MAFLFNKFQEAIRTLAKNPKFARDPRHLQFDADVNRLFLYTSYYRLGEHSEEKDAEEIID 60

Query: 61  MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
           MA KAS+ DQQ+QV  N+H Q+K  C +MD IL    KN P +S + ++   RRSGLSFA
Sbjct: 61  MASKASVVDQQKQVQGNVHYQLKHMCQAMDSILRPDIKNDPSQSPSDTHNKSRRSGLSFA 120

Query: 121 VGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANV 180
           VG      + PVVP TR LT+ ELS + +D  GYTLD++PS IPH++AGQGLFL GEA V
Sbjct: 121 VGTGVSSANKPVVPATRPLTQAELSNKFRDQFGYTLDIRPSGIPHKDAGQGLFLSGEARV 180

Query: 181 GAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGL 240
           GAV+AIYPG+IYSPAYYRYIPGYPR+DA N YLITRYDGTVINA+PW  G +T ELWDG 
Sbjct: 181 GAVVAIYPGVIYSPAYYRYIPGYPRIDACNSYLITRYDGTVINAKPWHLGGETMELWDGS 240

Query: 241 TLPEIMPN-SKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMV 299
            L +     S   E  SD+ W++L+KP+   R  +  E+LERRNPLA  HFANHP  G  
Sbjct: 241 HLVDYNSTPSTSPESNSDRAWRMLNKPLVKSRNENFGEVLERRNPLAFGHFANHPPGGST 300

Query: 300 PNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSST---PVLKT 356
           PNVMICPYDFPLTEKDMR YIPNI+FG  E V M+RFGSFWFK   GSG  T    VLKT
Sbjct: 301 PNVMICPYDFPLTEKDMRLYIPNITFGGEEPVTMKRFGSFWFK-SRGSGQQTGESSVLKT 359

Query: 357 LALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
           L LV+TR+I DEE+ LNYR S+SK RP WY+PVDEEED+RRWS
Sbjct: 360 LVLVSTRSIRDEEIFLNYRYSSSKARPEWYTPVDEEEDKRRWS 402

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
TAIR|locus:2166801	399	AT5G23200 "AT5G23200" [Arabido	0.994	0.994	0.613	5.6e-132
TAIR|locus:2181519	386	AT5G08270 "AT5G08270" [Arabido	0.949	0.981	0.552	2.9e-110

TAIR|locus:2166801 AT5G23200 "AT5G23200" [Arabidopsis thaliana (taxid:3702)]

 Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
 Identities = 246/401 (61%), Positives = 300/401 (74%)

Query:     1 MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRXXXXXXXXXXXX 60
             MA LF KFQ+AV  LAKS TFA++PRQLQFEAD+N+LF+YTSYNRLGR            
Sbjct:     1 MATLFNKFQQAVGVLAKSTTFAKNPRQLQFEADVNKLFMYTSYNRLGREAEETDAEEIIE 60

Query:    61 MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
             MAGKA+LS+QQ+QV +NIH Q+++FC  MD ILL   +     S + S   PRRSGL+FA
Sbjct:    61 MAGKATLSEQQKQVQENIHYQVEKFCSLMDGILLPDVRRNESGSQSTSPRPPRRSGLTFA 120

Query:   121 VGPT-ARP-TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 178
             +G   A P  D P+VP+T+ L   ++SQRL D +GYTL+ KPS IPH++AGQG F+ GEA
Sbjct:   121 IGSNNAFPHADQPLVPETKPLKLNDVSQRLMDQMGYTLETKPSVIPHKDAGQGCFIKGEA 180

Query:   179 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 238
             +VG V+A YPG+IYSPA+Y+YIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE W+
Sbjct:   181 DVGTVLAFYPGVIYSPAFYKYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREAWN 240

Query:   239 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 298
             G   P +  N+K AE GSD+ WK LSKP++    G G E+LERRNPLA  H ANHPAK M
Sbjct:   241 GSYTPAVKANTKTAENGSDRLWKALSKPLEGS--GKGKEVLERRNPLAFGHLANHPAKEM 298

Query:   299 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRXXXXXXXXXXXXXXXTPVLKTLA 358
              PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+R                PVLKTL 
Sbjct:   299 TPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTLV 358

Query:   359 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
             LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct:   359 LVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 399

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181519 AT5G08270 "AT5G08270" [Arabidopsis thaliana (taxid:3702)]

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 217/393 (55%), Positives = 273/393 (69%)

Query:     1 MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRXXXXXXXXXXXX 60
             M FLF KFQ+ V  LAKS TFA++PRQLQFEAD+N+LF++TSYNRLGR            
Sbjct:     6 MMFLFGKFQQGVGVLAKSTTFAKNPRQLQFEADINKLFMFTSYNRLGRDAEEADAEEIIE 65

Query:    61 MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
             MAGKA+ S+QQ+QV +NIH Q++ FC SM+EILL    N  I+ +   N     S     
Sbjct:    66 MAGKATFSEQQKQVQENIHYQLQNFCSSMNEILLT---N--IDKTKDLNEPGSESRRDNI 120

Query:   121 VGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANV 180
             V P A   D P+VP+T+ L   E+S RLKD +GYTL++KPS IPH++AGQG F+ GEA+V
Sbjct:   121 V-PAA---DKPIVPETKPLKLDEVSHRLKDRVGYTLEIKPSLIPHKDAGQGCFIEGEADV 176

Query:   181 GAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDG- 239
             GAV+A YPG+IYSPA++RYIPGYP VDAQN YLIT YDGTVINAQPWG G  +RE+W+G 
Sbjct:   177 GAVLAFYPGVIYSPAFHRYIPGYPNVDAQNSYLITGYDGTVINAQPWGRGGISREVWNGS 236

Query:   240 LTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSE-MLERRNPLALAHFANHPAKGM 298
              T PEI   +   E  SD+ WK+LS+P++   G  G E ++E RNPLA  HF NHP K M
Sbjct:   237 FTTPEIRTEATTTENSSDKVWKMLSRPLE---GSGGVEAVIEMRNPLAFGHFINHPGKEM 293

Query:   299 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRXXXXXXXXXXXXXXXTPVLKTLA 358
               NVMICPYDF L+E +MR YIPN++FGN  +V M R                 VLKT+ 
Sbjct:   294 ESNVMICPYDFLLSETEMRAYIPNVAFGNTGDVKMGRFESFLSRTGSNSSLDAHVLKTIV 353

Query:   359 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDE 391
             LVAT+A+C+EE++LNYRLSNS++R  WY P+DE
Sbjct:   354 LVATKALCNEELMLNYRLSNSEKRLEWYIPLDE 386


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      399       372   0.00087  117 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  244 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.40u 0.08s 29.48t   Elapsed:  00:00:01
  Total cpu time:  29.40u 0.08s 29.48t   Elapsed:  00:00:01
  Start:  Thu May  9 17:20:44 2013   End:  Thu May  9 17:20:45 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00031905001 SubName- Full=Chromosome undetermined scaffold_60, whole genome shotgun sequence; (487 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	399
smart00317	116	SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)	98.8
KOG1079	739	consensus Transcriptional repressor EZH1 [Transcri	98.7
KOG1080	1005	consensus Histone H3 (Lys4) methyltransferase comp	96.1
KOG1082	364	consensus Histone H3 (Lys9) methyltransferase SUV3	93.95
PF00856	162	SET: SET domain; InterPro: IPR001214 The SET domai	92.59
KOG2461	396	consensus Transcription factor BLIMP-1/PRDI-BF1, c	92.03
KOG1085	392	consensus Predicted methyltransferase (contains a	88.09
KOG4442	729	consensus Clathrin coat binding protein/Huntingtin	81.64

>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain

Probab=98.80  E-value=2.3e-08  Score=80.38  Aligned_cols=32  Identities=22%  Similarity=0.250  Sum_probs=28.7

Q ss_pred             CCCceEEEeEEecCCcEEEEecCeeecccccc
Q 015859          167 EAGQGLFLCGEANVGAVIAIYPGIIYSPAYYR  198 (399)
Q Consensus       167 ~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~  198 (399)
                      .+|.|||..-.+++|++|+-|+|.+..+....
T Consensus         9 ~~G~gl~a~~~i~~g~~i~~~~g~~~~~~~~~   40 (116)
T smart00317        9 GKGWGVRATEDIPKGEFIGEYVGEIITSEEAE   40 (116)
T ss_pred             CCcEEEEECCccCCCCEEEEEEeEEECHHHHH
Confidence            79999999999999999999999999864443

Putative methyl transferase, based on outlier plant homologues

>KOG1079 consensus Transcriptional repressor EZH1 [Transcription]

Probab=98.70  E-value=3.7e-08  Score=105.57  Aligned_cols=125  Identities=29%  Similarity=0.337  Sum_probs=91.5

Q ss_pred             EeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCC-CeeeeccCCeEEecCCCCCCCCCc
Q 015859          156 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQN-PYLITRYDGTVINAQPWGSGWDTR  234 (399)
Q Consensus       156 l~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N-~YLi~r~DG~vIDg~pwg~gg~sr  234 (399)
                      +-+.||.|    ||-|+|++-.|.++.+|+.|-|.+-+..-.-.- |- ..|..+ +|||-.+++.|||++-.|      
T Consensus       596 ~llapSdV----aGwGlFlKe~v~KnefisEY~GE~IS~dEADrR-Gk-iYDr~~cSflFnln~dyviDs~rkG------  663 (739)
T KOG1079|consen  596 VLLAPSDV----AGWGLFLKESVSKNEFISEYTGEIISHDEADRR-GK-IYDRYMCSFLFNLNNDYVIDSTRKG------  663 (739)
T ss_pred             eeechhhc----cccceeeccccCCCceeeeecceeccchhhhhc-cc-ccccccceeeeeccccceEeeeeec------
Confidence            77899988    899999999999999999999998773211100 00 013334 799999999999998864      


Q ss_pred             cccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCcc
Q 015859          235 ELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEK  314 (399)
Q Consensus       235 ~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~~  314 (399)
                                                                         .++|||||-+   .||..+.-+=++.   
T Consensus       664 ---------------------------------------------------nk~rFANHS~---nPNCYAkvm~V~G---  686 (739)
T KOG1079|consen  664 ---------------------------------------------------NKIRFANHSF---NPNCYAKVMMVAG---  686 (739)
T ss_pred             ---------------------------------------------------chhhhccCCC---CCCcEEEEEEecC---
Confidence                                                               1368999987   5887766553332   


Q ss_pred             cccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccCCCC------CCCCccc
Q 015859          315 DMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNSK------RRPVWYS  387 (399)
Q Consensus       315 ~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~~------~~P~WY~  387 (399)
                                                             -+=+.+.|.|+| .|||||.+|||++..      .-++||.
T Consensus       687 ---------------------------------------dhRIGifAkRaIeagEELffDYrYs~~~~~k~~~~~~~s~k  727 (739)
T KOG1079|consen  687 ---------------------------------------DHRIGIFAKRAIEAGEELFFDYRYSPEHALKFVGIERESYK  727 (739)
T ss_pred             ---------------------------------------CcceeeeehhhcccCceeeeeeccCccccccccccCccccc
Confidence                                                   122447899999 889999999999865      2346665


Q ss_pred             c
Q 015859          388 P  388 (399)
Q Consensus       388 p  388 (399)
                      +
T Consensus       728 ~  728 (739)
T KOG1079|consen  728 V  728 (739)
T ss_pred             c
Confidence            4

>KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription]

Probab=96.10  E-value=0.02  Score=65.46  Aligned_cols=68  Identities=26%  Similarity=0.409  Sum_probs=51.3

Q ss_pred             EeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccc--cccccCCCCCCCCCCCeeeeccCCeEEecCCCC
Q 015859          156 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPA--YYRYIPGYPRVDAQNPYLITRYDGTVINAQPWG  228 (399)
Q Consensus       156 l~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~--~~~~ipgyP~vd~~N~YLi~r~DG~vIDg~pwg  228 (399)
                      |.-.+|.|    -|-|||..+.+.+|.-|-=|=|-++.+.  =+|-+ .|-+.-..-.|||+-=|++||||...|
T Consensus       868 ~~F~~s~i----H~wglfa~~~i~~~dmViEY~Ge~vR~~iad~RE~-~Y~~~gi~~sYlfrid~~~ViDAtk~g  937 (1005)
T KOG1080|consen  868 VKFGRSGI----HGWGLFAMENIAAGDMVIEYRGELVRSSIADLREA-RYERMGIGDSYLFRIDDEVVVDATKKG  937 (1005)
T ss_pred             hccccccc----cccceeeccCccccceEEEeeceehhhhHHHHHHH-HHhccCcccceeeecccceEEeccccC
Confidence            66778888    4899999999999999999999999841  12221 222223356799987789999999864

>KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription]

Probab=93.95  E-value=0.14  Score=51.98  Aligned_cols=148  Identities=18%  Similarity=0.217  Sum_probs=88.4

Q ss_pred             hCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeeccCCeEEecCCCCCCC
Q 015859          152 IGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGW  231 (399)
Q Consensus       152 lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~DG~vIDg~pwg~gg  231 (399)
                      +=|.|.|-.+   + ..|=||--.=.+++|+-|+=|.|-|-+-.-.+...      ..+.|++...|++.+.-..|..  
T Consensus       174 ~~~~leIfrt---~-~kGwgvRs~~~I~~G~fvcEyaGe~~t~~e~~~~~------~~~~~~~~~~~~~~~~~~~~~~--  241 (364)
T KOG1082|consen  174 LQFHLEVFRT---P-EKGWGVRTLDPIPAGEFVCEYAGEVLTSEEAQRRT------HLREYLDDDCDAYSIADREWVD--  241 (364)
T ss_pred             cccceEEEec---C-CceeeecccccccCCCeeEEEeeEecChHHhhhcc------ccccccccccccchhhhccccc--
Confidence            4455555555   2 36667666558999999999999998854433331      2456766555655555455521  


Q ss_pred             CCccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCC
Q 015859          232 DTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPL  311 (399)
Q Consensus       232 ~sr~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~  311 (399)
                       .  -+.+            ......+.+...+.+          ..+...+=-.+|+|+||-   -+|||+++.+-.  
T Consensus       242 -~--~~~~------------~~~~~~~~~~~~~~~----------~~ida~~~GNv~RfinHS---C~PN~~~~~v~~--  291 (364)
T KOG1082|consen  242 -E--SPVG------------NTFVAPSLPGGPGRE----------LLIDAKPHGNVARFINHS---CSPNLLYQAVFQ--  291 (364)
T ss_pred             -c--cccc------------ccccccccccCCCcc----------eEEchhhcccccccccCC---CCccceeeeeee--
Confidence             1  0111            001111111111110          223455556788999997   579999987711  


Q ss_pred             CcccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccC
Q 015859          312 TEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLS  377 (399)
Q Consensus       312 ~~~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls  377 (399)
                                    +  +                    ..+.+--++|.|+++| ..|||=++|-.+
T Consensus       292 --------------~--~--------------------~~~~~~~i~ffa~~~I~p~~ELT~dYg~~  322 (364)
T KOG1082|consen  292 --------------D--E--------------------FVLLYLRIGFFALRDISPGEELTLDYGKA  322 (364)
T ss_pred             --------------c--C--------------------CccchheeeeeeccccCCCcccchhhccc
Confidence                          1  0                    1233556789999999 889999999865

>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco

Probab=92.59  E-value=0.097  Score=43.27  Aligned_cols=27  Identities=37%  Similarity=0.605  Sum_probs=22.1

Q ss_pred             CceEEEeEEecCCcEEEEecCeeeccc
Q 015859          169 GQGLFLCGEANVGAVIAIYPGIIYSPA  195 (399)
Q Consensus       169 G~GVFl~G~v~~GtVVa~YPGvVY~p~  195 (399)
                      |+|||.+-.+++|+||.++.+.+..+.
T Consensus         1 GrGl~At~dI~~Ge~I~~p~~~~~~~~   27 (162)
T PF00856_consen    1 GRGLFATRDIKAGEVILIPRPAILTPD   27 (162)
T ss_dssp             SEEEEESS-B-TTEEEEEESEEEEEHH
T ss_pred             CEEEEECccCCCCCEEEEECcceEEeh
Confidence            899999999999999988888887753

The SET domain itself turned out to be an uncommon structure. Although in all three studies, electron density maps revealed the location of the AdoMet or AdoHcy cofactor, the SET domain bears no similarity at all to the canonical/AdoMet-dependent methyltransferase fold. Strictly conserved in the C-terminal motif of the SET domain tyrosine could be involved in abstracting a proton from the protonated amino group of the substrate lysine, promoting its nucleophilic attack on the sulphonium methyl group of the AdoMet cofactor. In contrast to the AdoMet-dependent protein methyltranferases of the classical type, which tend to bind their polypeptide substrates on top of the cofactor, it is noted from the Rubisco LSMT structure that the AdoMet seems to bind in a separate cleft, suggesting how a polypeptide substrate could be subjected to multiple rounds of methylation without having to be released from the enzyme. In contrast, SET7/9 is able to add only a single methyl group to its substrate. It has been demonstrated that association of SET domain and myotubularin-related proteins modulates growth control []. The SET domain-containing Drosophila melanogaster (Fruit fly) protein, enhancer of zeste, has a function in segment determination and the mammalian homologue may be involved in the regulation of gene transcription and chromatin structure. Histone lysine methylation is part of the histone code that regulated chromatin function and epigenetic control of gene function. Histone lysine methyltransferases (HMTase) differ both in their substrate specificity for the various acceptor lysines as well as in their product specificity for the number of methyl groups (one, two, or three) they transfer. With just one exception [], the HMTases belong to SET family that can be classified according to the sequences surrounding the SET domain [, ]. Structural studies on the human SET7/9, a mono-methylase, have revealed the molecular basis for the specificity of the enzyme for the histone-target and the roles of the invariant residues in the SET domain in determining the methylation specificities []. The pre-SET domain, as found in the SUV39 SET family, contains nine invariant cysteine residues that are grouped into two segments separated by a region of variable length. These 9 cysteines coordinate 3 zinc ions to form to form a triangular cluster, where each of the zinc ions is coordinated by 4 four cysteines to give a tetrahedral configuration. The function of this domain is structural, holding together 2 long segments of random coils. The C-terminal region including the post-SET domain is disordered when not interacting with a histone tail and in the absence of zinc. The three conserved cysteines in the post-SET domain form a zinc-binding site when coupled to a fourth conserved cysteine in the knot-like structure close to the SET domain active site []. The structured post-SET region brings in the C-terminal residues that participate in S-adenosylmethine-binding and histone tail interactions. The three conserved cysteine residues are essential for HMTase activity, as replacement with serine abolishes HMTase activity [], []. ; GO: 0005515 protein binding; PDB: 3TG5_A 3S7F_A 3RIB_B 3TG4_A 3S7J_A 3S7D_A 3S7B_A 3H6L_A 3SMT_A 3K5K_A ....

>KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription]

Probab=92.03  E-value=0.18  Score=52.54  Aligned_cols=63  Identities=24%  Similarity=0.399  Sum_probs=45.3

Q ss_pred             EEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeeccC-C---eEEecCCC
Q 015859          155 TLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYD-G---TVINAQPW  227 (399)
Q Consensus       155 sl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~D-G---~vIDg~pw  227 (399)
                      .|.+++|+|+  .+|-||+=+..+++|+.-+=|=|-+        |+-+..-.++|.|+..-|. +   .+|||.+-
T Consensus        29 ~l~i~~Ssv~--~~~lgV~s~~~i~~G~~FGP~~G~~--------~~~~~~~~~n~~y~W~I~~~d~~~~~iDg~d~   95 (396)
T KOG2461|consen   29 ELRIKPSSVP--VTGLGVWSNASILPGTSFGPFEGEI--------IASIDSKSANNRYMWEIFSSDNGYEYIDGTDE   95 (396)
T ss_pred             ceEeeccccC--CccccccccccccCcccccCccCcc--------ccccccccccCcceEEEEeCCCceEEeccCCh
Confidence            3789999999  8999999999999988887777776        2222222345677665443 2   68888874

>KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only]

Probab=88.09  E-value=0.35  Score=49.17  Aligned_cols=56  Identities=20%  Similarity=0.289  Sum_probs=34.9

Q ss_pred             cccccHHHHHH----HHHHHh--CeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeec
Q 015859          136 TRQLTRTELSQ----RLKDAI--GYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYS  193 (399)
Q Consensus       136 t~~l~~~~vs~----~l~~~l--Gfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~  193 (399)
                      ..+-+..+|++    .|.+.+  |=+-.++.--+.  ..|+||-.+-....|..|--|=|..-.
T Consensus       230 S~RKtk~~i~~E~~~~l~~~vl~g~~egl~~~~~d--gKGRGv~a~~~F~rgdFVVEY~Gdlie  291 (392)
T KOG1085|consen  230 SNRKTKKQISDEAKHALRDTVLKGTNEGLLEVYKD--GKGRGVRAKVNFERGDFVVEYRGDLIE  291 (392)
T ss_pred             cchhhHHHhhHHHHHHHHHHHHhccccceeEEeec--cccceeEeecccccCceEEEEecceee
Confidence            33334445544    444443  333333333444  589999888888999999999887644

>KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport]

Probab=81.64  E-value=6.1  Score=44.22  Aligned_cols=59  Identities=22%  Similarity=0.308  Sum_probs=38.6

Q ss_pred             CCceEEEeEEecCCcEEEEecCeeeccccccc-cCCCCCCCCCC--CeeeeccCCeEEecCCCC
Q 015859          168 AGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQN--PYLITRYDGTVINAQPWG  228 (399)
Q Consensus       168 AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~-ipgyP~vd~~N--~YLi~r~DG~vIDg~pwg  228 (399)
                      .|-||=..-.+++|+.|-=|=|=|-+-.-|+. +.-|-+  ..|  -|.|+.--|.+|||.-.|
T Consensus       130 KG~GLRA~~dI~~g~FI~EY~GEVI~~~Ef~kR~~~Y~~--d~~kh~Yfm~L~~~e~IDAT~KG  191 (729)
T KOG4442|consen  130 KGCGLRAEEDIPKGQFILEYIGEVIEEKEFEKRVKRYAK--DGIKHYYFMALQGGEYIDATKKG  191 (729)
T ss_pred             cccceeeccccCCCcEEeeeccccccHHHHHHHHHHHHh--cCCceEEEEEecCCceecccccC
Confidence            45555555589999999999999988543331 111110  122  366666689999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	399
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 5e-06
 Identities = 74/472 (15%), Positives = 135/472 (28%), Gaps = 161/472 (34%)

Query: 27  QLQFEADMNRLFLYTSYNRLGRDAEEA-----DAEEIIDMAGKASLSDQQQQVLDNI--- 78
            + FE   ++      Y  +    E+A     D +++ DM  K+ LS ++   +D+I   
Sbjct: 6   HMDFETGEHQY----QYKDILSVFEDAFVDNFDCKDVQDMP-KSILSKEE---IDHIIMS 57

Query: 79  ------------------HSQIKRFCLSMDEILLLPEKNVP--IESSAQSNAAPRRSGLS 118
                                +++F   ++E+L     N    +         P      
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKF---VEEVL---RINYKFLMSPIKTEQRQPSMMTRM 111

Query: 119 FAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 178
           +         D+ V  +   ++R +   +L+ A+   L+L+P         + + + G  
Sbjct: 112 YIEQRDRLYNDNQVFAK-YNVSRLQPYLKLRQAL---LELRP--------AKNVLIDGVL 159

Query: 179 NVG-AVIAI-----------YPGIIY--------SPA---------YYRYIPGY-PRVD- 207
             G   +A+               I+        SP           Y+  P +  R D 
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 208 -------------------AQNPY----LITR--YDGTVINAQPWGSGWD--------TR 234
                                 PY    L+     +    NA      ++        TR
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA------FNLSCKILLTTR 273

Query: 235 --ELWDGL-----TLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLAL 287
             ++ D L     T   +  +S       D+   LL K +D +      E+L   NP  L
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTP--DEVKSLLLKYLDCRPQDLPREVL-TTNPRRL 330

Query: 288 AHFA----NHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRR-FGSFW-F 341
           +  A    +  A           +     +K     I   S    E    R+ F     F
Sbjct: 331 SIIAESIRDGLA-------TWDNWKHVNCDKLTT--IIESSLNVLEPAEYRKMFDRLSVF 381

Query: 342 KWGSGSGSSTPV-LKTLALV--ATRAICDEEV---LLNYRLSNSKRRPVWYS 387
                   S  +    L+L+           V   L  Y L   + +    S
Sbjct: 382 P------PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	399
2f69_A	261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	99.31
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	99.13
2qpw_A	149	PR domain zinc finger protein 2; methyltransferase	99.01
3ep0_A	170	PR domain zinc finger protein 12; PR domain-contai	98.92
3f9x_A	166	Histone-lysine N-methyltransferase SETD8; methyltr	98.8
2w5y_A	192	Histone-lysine N-methyltransferase HRX; transcript	98.72
3ooi_A	232	Histone-lysine N-methyltransferase, H3 lysine-36 l	98.7
3db5_A	151	PR domain zinc finger protein 4; methyltransferase	98.69
3ope_A	222	Probable histone-lysine N-methyltransferase ASH1L;	98.69
1n3j_A	119	A612L, histone H3 lysine methyltransferase; beta b	98.67
3dal_A	196	PR domain zinc finger protein 1; methyltransferase	98.66
3h6l_A	278	Histone-lysine N-methyltransferase SETD2; SET doma	98.56
3hna_A	287	Histone-lysine N-methyltransferase, H3 lysine-9 sp	98.49
1mvh_A	299	Cryptic LOCI regulator 4; lysine methyltransferase	98.3
2r3a_A	300	Histone-lysine N-methyltransferase SUV39H2; histon	98.29
3bo5_A	290	Histone-lysine N-methyltransferase setmar; SET dom	98.12
1ml9_A	302	Histone H3 methyltransferase DIM-5; adoMet-depende	98.08
3ihx_A	152	PR domain zinc finger protein 10; PRDM10, methyltr	97.65
3ray_A	237	PR domain-containing protein 11; structural genomi	97.59
3rq4_A	247	Histone-lysine N-methyltransferase SUV420H2; suppr	97.26
3s8p_A	273	Histone-lysine N-methyltransferase SUV420H1; SET d	96.87

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*

Probab=99.31  E-value=3.1e-12  Score=121.91  Aligned_cols=139  Identities=24%  Similarity=0.270  Sum_probs=100.6

Q ss_pred             EEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeeccCCeEEecCCCCCCCCCc
Q 015859          155 TLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTR  234 (399)
Q Consensus       155 sl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~DG~vIDg~pwg~gg~sr  234 (399)
                      .+.+++|.|+  ++|.|||..-.+++|++|+-|.|.|.+.......     -...|.|+|..-++.+||+...+.   + 
T Consensus       110 ~~~v~~S~i~--~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R-----~~~~~~~~f~l~~~~~IDa~~~~~---~-  178 (261)
T 2f69_A          110 RVYVAESLIS--SAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSR-----DWALNGNTLSLDEETVIDVPEPYN---H-  178 (261)
T ss_dssp             TEEEEECSST--TCCEEEEESSCBCTTCEEEEECCEEECHHHHHTS-----CGGGCSSCEECSSSCEEECCTTTT---S-
T ss_pred             eEEEEecCCC--CCceEEEECcccCCCCEEEEEeeEEeCHHHHHHH-----hhhhccceeeecCCeEEEcccccc---c-
Confidence            4889999997  8999999999999999999999999985433221     011256778777899999976421   0 


Q ss_pred             cccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCcc
Q 015859          235 ELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEK  314 (399)
Q Consensus       235 ~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~~  314 (399)
                                                  +                 ...--.+|+|+||--   .||+.+..++-|.   
T Consensus       179 ----------------------------~-----------------~~~~Gn~aRfiNHSC---~PN~~~~~~~~~~---  207 (261)
T 2f69_A          179 ----------------------------V-----------------SKYCASLGHKANHSF---TPNCIYDMFVHPR---  207 (261)
T ss_dssp             ----------------------------T-----------------TTCCSCCGGGCEECS---SCSEEEEEEEETT---
T ss_pred             ----------------------------c-----------------ccccccceeeEeeCC---CCCeEEEEEEcCC---
Confidence                                        0                 000123578999963   4898876641110   


Q ss_pred             cccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccCCC------CCCCCccc
Q 015859          315 DMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNS------KRRPVWYS  387 (399)
Q Consensus       315 ~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~------~~~P~WY~  387 (399)
                                                            .-+.++|+|+||| .||||+.||.+...      ...|+||.
T Consensus       208 --------------------------------------~~~~i~i~A~RdI~~GEELt~dYg~~~~~~~~~~~~ap~W~~  249 (261)
T 2f69_A          208 --------------------------------------FGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAPEWYQ  249 (261)
T ss_dssp             --------------------------------------TEEEEEEEESSCBCTTCEEEECCCCCSCCC-----CSCHHHH
T ss_pred             --------------------------------------CCcEEEEEECcccCCCCEEEEEcCCccccccccCccCccHHH
Confidence                                                  1356799999999 99999999998865      37899998


Q ss_pred             cCCHHH
Q 015859          388 PVDEEE  393 (399)
Q Consensus       388 pvD~eE  393 (399)
                      ..+.+-
T Consensus       250 ~~~~~~  255 (261)
T 2f69_A          250 VELKAF  255 (261)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            766543

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A

Probab=99.13  E-value=1.7e-10  Score=109.77  Aligned_cols=125  Identities=24%  Similarity=0.261  Sum_probs=92.1

Q ss_pred             EEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeeccCCeEEecCCCCCCCCCc
Q 015859          155 TLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTR  234 (399)
Q Consensus       155 sl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~DG~vIDg~pwg~gg~sr  234 (399)
                      .+.+++|.|+  .+|.|||..-.+++|++|+.|.|.|.+........     ...|.|+|..-+..+||+..-+.   + 
T Consensus       164 ~~~v~~S~i~--GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~-----~~~~~~~~~l~~~~~iDa~~~~~---~-  232 (293)
T 1h3i_A          164 RVYVAESLIS--SAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRD-----WALNGNTLSLDEETVIDVPEPYN---H-  232 (293)
T ss_dssp             TEEEEECSSS--SSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSC-----GGGCTTEEECSSSCEEECCTTTT---S-
T ss_pred             eEEEeeeecC--CCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHh-----hhcccCEEecCCCEEEeCccccc---c-
Confidence            4889999997  79999999999999999999999999854433221     12357788888899999977421   0 


Q ss_pred             cccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCcc
Q 015859          235 ELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEK  314 (399)
Q Consensus       235 ~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~~  314 (399)
                             .                                      +...-.+|+|+||--   .||+.+..+..|.   
T Consensus       233 -------~--------------------------------------~~~~gn~ar~iNHsc---~pN~~~~~~~~~~---  261 (293)
T 1h3i_A          233 -------V--------------------------------------SKYCASLGHKANHSF---TPNCIYDMFVHPR---  261 (293)
T ss_dssp             -------T--------------------------------------TTCCSCCGGGSEEES---SCSEEEEEEEETT---
T ss_pred             -------c--------------------------------------ceeeccceeeeccCC---CCCeEEEEEEcCC---
Confidence                   0                                      001123689999953   4898877652211   


Q ss_pred             cccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccCCC
Q 015859          315 DMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNS  379 (399)
Q Consensus       315 ~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~  379 (399)
                                                            ..+.++|+|+||| .+|||+.+|.+...
T Consensus       262 --------------------------------------~~~~~~~~a~r~I~~geElt~~Yg~~~~  289 (293)
T 1h3i_A          262 --------------------------------------FGPIKCIRTLRAVEADEELTVAYGYDHS  289 (293)
T ss_dssp             --------------------------------------TEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred             --------------------------------------CCcEEEEEECCccCCCCEEEEecCCCCC
Confidence                                                  1466789999999 99999999998753

>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*

Probab=99.01  E-value=8.9e-10  Score=97.24  Aligned_cols=72  Identities=17%  Similarity=0.221  Sum_probs=55.0

Q ss_pred             HHHHHHHHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeecc--CC-
Q 015859          143 ELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY--DG-  219 (399)
Q Consensus       143 ~vs~~l~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~--DG-  219 (399)
                      ++-......+--.|.+++|.|+  ++|.|||.+-.+++|+.|+-|.|.+.+..-.          ..+.|++.-+  |+ 
T Consensus        18 ~~~~~~~~~lp~~l~l~~S~i~--~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~----------~~~~Y~f~i~~~~~~   85 (149)
T 2qpw_A           18 EVPEHVLRGLPEEVRLFPSAVD--KTRIGVWATKPILKGKKFGPFVGDKKKRSQV----------KNNVYMWEVYYPNLG   85 (149)
T ss_dssp             GSCHHHHHTCCTTEEEEECSSC--TTSEEEEESSCBCTTCEECCCCCEEECGGGC----------CCSSSEEEEEETTTE
T ss_pred             hhhHHHHhCCCCCeEEEEcCCC--CCceEEEECCccCCCCEEEEEeCEEcCHHHh----------ccCceEEEEecCCCe
Confidence            3334445556566899999997  8999999999999999999999999986432          1467988754  33 


Q ss_pred             -eEEecCC
Q 015859          220 -TVINAQP  226 (399)
Q Consensus       220 -~vIDg~p  226 (399)
                       .+|||..
T Consensus        86 ~~~IDa~~   93 (149)
T 2qpw_A           86 WMCIDATD   93 (149)
T ss_dssp             EEEEECSS
T ss_pred             eEEEeCCC
Confidence             4688876

>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}

Probab=98.92  E-value=3.5e-09  Score=95.71  Aligned_cols=112  Identities=20%  Similarity=0.272  Sum_probs=80.7

Q ss_pred             EeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeecc--CC---eEEecCCCCCC
Q 015859          156 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY--DG---TVINAQPWGSG  230 (399)
Q Consensus       156 l~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~--DG---~vIDg~pwg~g  230 (399)
                      |.+++|+|+  ++|.|||.+-.+++|+.++=|-|.+.+..-...       +.++.|++.-+  ||   .+|||..-.. 
T Consensus        29 l~l~~S~i~--~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~-------~~~~~y~w~i~~~~G~~~~~IDa~~e~~-   98 (170)
T 3ep0_A           29 VIIAQSSIP--GEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDI-------CKNNNLMWEVFNEDGTVRYFIDASQEDH-   98 (170)
T ss_dssp             EEEEECSSS--SCSEEEEESSCBCTTCEEEEECCEEECC-----------------CEEEEECTTSSEEEEEECC-----
T ss_pred             eEEEEcCCC--CCceEEEECcccCCCCEEEecCceecCHHHhcc-------ccCCceEEEEecCCCcEEEEEECCCCCC-
Confidence            788999998  799999999899999999999999998743211       23678988877  47   4799986210 


Q ss_pred             CCCccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCC
Q 015859          231 WDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFP  310 (399)
Q Consensus       231 g~sr~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP  310 (399)
                                                               ..             ..-||||......+|+..+.++  
T Consensus        99 -----------------------------------------~N-------------WmR~Vn~A~~~~eqNl~a~q~~--  122 (170)
T 3ep0_A           99 -----------------------------------------RS-------------WMTYIKCARNEQEQNLEVVQIG--  122 (170)
T ss_dssp             --------------------------------------------------------GGGGCEECSSTTTCCEEEEEET--
T ss_pred             -----------------------------------------cc-------------eeeeEEecCCcccCCeeeEEEC--
Confidence                                                     01             2358899877778999888761  


Q ss_pred             CCcccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccC
Q 015859          311 LTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLS  377 (399)
Q Consensus       311 ~~~~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls  377 (399)
                                                                  +-+.+.|+||| .||||+++|.-+
T Consensus       123 --------------------------------------------~~I~~~a~RdI~pGeELlvwYg~~  146 (170)
T 3ep0_A          123 --------------------------------------------TSIFYKAIEMIPPDQELLVWYGNS  146 (170)
T ss_dssp             --------------------------------------------TEEEEEESSCBCTTCBCEEEECC-
T ss_pred             --------------------------------------------CEEEEEECcCcCCCCEEEEeeCHH
Confidence                                                        13567999999 999999999844

>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*

Probab=98.80  E-value=1e-08  Score=89.51  Aligned_cols=48  Identities=10%  Similarity=0.220  Sum_probs=37.5

Q ss_pred             HHHHHHHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccc
Q 015859          144 LSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPA  195 (399)
Q Consensus       144 vs~~l~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~  195 (399)
                      +...++.-.-..+.+.++  |  ..|.|||..-.+++|++|+-|.|.|.+..
T Consensus        20 ~~~~~q~g~~~~l~v~~~--~--~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~   67 (166)
T 3f9x_A           20 IDELIESGKEEGMKIDLI--D--GKGRGVIATKQFSRGDFVVEYHGDLIEIT   67 (166)
T ss_dssp             HHHHHHHTCCTTEEEEEE--T--TTEEEEEESSCBCTTCEEEECCSEEEEHH
T ss_pred             HHHHHHcCCccCeEEEEC--C--CceeEEEECCCcCCCCEEEEeeceEcCHH
Confidence            334444555566777766  5  79999999999999999999999998743

>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*

Probab=98.72  E-value=1.5e-08  Score=92.66  Aligned_cols=69  Identities=20%  Similarity=0.279  Sum_probs=48.4

Q ss_pred             eEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeecccccccc-CCCCCCCCCCCeeeeccCCeEEecCCC
Q 015859          154 YTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYI-PGYPRVDAQNPYLITRYDGTVINAQPW  227 (399)
Q Consensus       154 fsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~i-pgyP~vd~~N~YLi~r~DG~vIDg~pw  227 (399)
                      ..+.+.+|.+    .|.|||..-.+++|++|+-|.|.|.+......- ..|-. ...+.|++.--++.+||+...
T Consensus        52 ~~l~V~~s~~----~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~-~~~~~Y~f~l~~~~~IDa~~~  121 (192)
T 2w5y_A           52 EAVGVYRSPI----HGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDS-KGIGCYMFRIDDSEVVDATMH  121 (192)
T ss_dssp             HHEEEEECSS----SSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHH-HTCCCCEEECSSSEEEECTTT
T ss_pred             CcEEEEEcCC----ceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhh-cCCceeeeeecCceEEECccc
Confidence            4488888854    899999999999999999999999885432100 00000 012468887667888998764

>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}

Probab=98.70  E-value=1.3e-08  Score=94.97  Aligned_cols=76  Identities=20%  Similarity=0.206  Sum_probs=54.4

Q ss_pred             HHHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccc-cCCCCCCCCCCCeeeeccCCeEEecCC
Q 015859          148 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQNPYLITRYDGTVINAQP  226 (399)
Q Consensus       148 l~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~-ipgyP~vd~~N~YLi~r~DG~vIDg~p  226 (399)
                      ++...-..+.+..|  +  ..|.|||..-.+++|++|+-|.|.|.+..-++. +..+...+..+.|++.--++.+||+..
T Consensus        86 ~q~~~~~~lev~~t--~--~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~  161 (232)
T 3ooi_A           86 FSKRQYPEVEIFRT--L--QRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGP  161 (232)
T ss_dssp             HHHTCCCCEEEEEC--S--SSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEE
T ss_pred             ccCCCCccEEEEEc--C--CceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEeccc
Confidence            45566677888888  3  689999999999999999999999998543221 000001123567888777888888876


Q ss_pred             C
Q 015859          227 W  227 (399)
Q Consensus       227 w  227 (399)
                      .
T Consensus       162 ~  162 (232)
T 3ooi_A          162 K  162 (232)
T ss_dssp             E
T ss_pred             c
Confidence            4

>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}

Probab=98.69  E-value=4.1e-08  Score=86.47  Aligned_cols=112  Identities=18%  Similarity=0.165  Sum_probs=76.8

Q ss_pred             EeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeecc-CC---eEEecCCCCCCC
Q 015859          156 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY-DG---TVINAQPWGSGW  231 (399)
Q Consensus       156 l~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~-DG---~vIDg~pwg~gg  231 (399)
                      |.+++| ++  ++|.|||.+-.+++|+.++=|.|.+.+..-....     .+.++.|++.-+ +|   .+|||.+-..  
T Consensus        25 l~l~~S-~~--~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~-----~~~~~~y~w~i~~~~~~~~~iD~~~~~~--   94 (151)
T 3db5_A           25 LVLRQS-IV--GAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEW-----TDKAVNHIWKIYHNGVLEFCIITTDENE--   94 (151)
T ss_dssp             EEEEEC-C-----CEEEEESSCBCTTCEECCCCCEEEC----------------CCSEEEEEETTEEEEEEECCCTTT--
T ss_pred             eEEEEc-cC--CCceEEEEecccCCCCEEEEeccEEeCHHHhhcc-----cccCCCceEEEEeCCCEEEEEECcCCCC--
Confidence            567788 77  7999999999999999999999999997432211     134678887655 44   3789876310  


Q ss_pred             CCccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCC
Q 015859          232 DTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPL  311 (399)
Q Consensus       232 ~sr~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~  311 (399)
                                                              ..|             .-||||......+|+..+.++   
T Consensus        95 ----------------------------------------~NW-------------mR~Vn~A~~~~eqNl~a~q~~---  118 (151)
T 3db5_A           95 ----------------------------------------CNW-------------MMFVRKARNREEQNLVAYPHD---  118 (151)
T ss_dssp             ----------------------------------------SCG-------------GGGCEECSSTTTCCEEEEEET---
T ss_pred             ----------------------------------------Ccc-------------eeEEEecCCcccCceEEEEEC---
Confidence                                                    012             347899887778999998761   


Q ss_pred             CcccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeeccc
Q 015859          312 TEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRL  376 (399)
Q Consensus       312 ~~~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRl  376 (399)
                                                                 .-+.+.|+||| .||||++.|.-
T Consensus       119 -------------------------------------------~~I~~~a~rdI~pGeELlv~Yg~  141 (151)
T 3db5_A          119 -------------------------------------------GKIFFCTSQDIPPENELLFYYSR  141 (151)
T ss_dssp             -------------------------------------------TEEEEEESSCBCTTCBCEEEECC
T ss_pred             -------------------------------------------CEEEEEEccccCCCCEEEEecCH
Confidence                                                       12567999999 99999999963

>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}

Probab=98.69  E-value=1.9e-08  Score=93.01  Aligned_cols=114  Identities=23%  Similarity=0.360  Sum_probs=83.7

Q ss_pred             EeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccc-c-CCCCCCCCCCCeeeeccCCeEEecCCCCCCCCC
Q 015859          156 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-I-PGYPRVDAQNPYLITRYDGTVINAQPWGSGWDT  233 (399)
Q Consensus       156 l~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~-i-pgyP~vd~~N~YLi~r~DG~vIDg~pwg~gg~s  233 (399)
                      +.+..|  +  ..|.|||..-.+++|++|.-|.|.|.+...++. + ..|.  ...+.|++..-++.+||+...|     
T Consensus        76 lev~~t--~--~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~--~~~~~y~~~l~~~~~IDa~~~G-----  144 (222)
T 3ope_A           76 LERFRA--E--EKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYH--NHSDHYCLNLDSGMVIDSYRMG-----  144 (222)
T ss_dssp             CEEEEC--T--TSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTST--TCCSCCEEEEETTEEEECSSEE-----
T ss_pred             EEEEEc--C--CCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhc--ccCCeEEEecCCCEEEeCcccc-----
Confidence            566666  3  689999999999999999999999998644321 1 1111  1245688887788999988653     


Q ss_pred             ccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCc
Q 015859          234 RELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTE  313 (399)
Q Consensus       234 r~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~  313 (399)
                                                                          .++.|+||-=   .||+.+..+.+.   
T Consensus       145 ----------------------------------------------------n~aRfiNHSC---~PN~~~~~~~~~---  166 (222)
T 3ope_A          145 ----------------------------------------------------NEARFINHSC---DPNCEMQKWSVN---  166 (222)
T ss_dssp             ----------------------------------------------------CGGGGCEECS---SCSEEEEEEEET---
T ss_pred             ----------------------------------------------------ccceeeccCC---CCCeEeEEEEEC---
Confidence                                                                1356899963   688877654221   


Q ss_pred             ccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccC
Q 015859          314 KDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLS  377 (399)
Q Consensus       314 ~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls  377 (399)
                                                            . ...++|+|+||| .||||++||.+.
T Consensus       167 --------------------------------------~-~~~i~~~A~RdI~~GEELT~dY~~~  192 (222)
T 3ope_A          167 --------------------------------------G-VYRIGLYALKDMPAGTELTYDYNFH  192 (222)
T ss_dssp             --------------------------------------T-EEEEEEEESSCBCTTCBCEECTTSS
T ss_pred             --------------------------------------C-eEEEEEEECCccCCCCEEEEECCCc
Confidence                                                  0 356889999999 999999999975

>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*

Probab=98.67  E-value=2.8e-08  Score=83.07  Aligned_cols=48  Identities=19%  Similarity=0.261  Sum_probs=38.3

Q ss_pred             EEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeee
Q 015859          155 TLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLI  214 (399)
Q Consensus       155 sl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi  214 (399)
                      .+.+++|.+    .|.|||..-.+++|++|+-|||.|.+.......        .+.|++
T Consensus         5 ~~~v~~s~~----~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~--------~~~y~f   52 (119)
T 1n3j_A            5 RVIVKKSPL----GGYGVFARKSFEKGELVEECLCIVRHNDDWGTA--------LEDYLF   52 (119)
T ss_dssp             SEEEECSCS----SCCEEEECCCBCSCEEECCCCCEEECSHHHHHH--------SCSEEE
T ss_pred             CEEEEECCC----ceeEEEECCcCCCCCEEEEeeEEEECHHHHhhc--------cCCeEE
Confidence            367888865    499999999999999999999999987544431        356776

>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}

Probab=98.66  E-value=4.6e-08  Score=90.35  Aligned_cols=114  Identities=18%  Similarity=0.254  Sum_probs=86.2

Q ss_pred             hCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeecc-CC---eEEecCCC
Q 015859          152 IGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY-DG---TVINAQPW  227 (399)
Q Consensus       152 lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~-DG---~vIDg~pw  227 (399)
                      |==.|.+++|+||  ++|.|||.+-.+++|+.++=|-|.++...-   +|-    +.++.|++.-+ +|   .+|||.+-
T Consensus        56 LP~~L~lr~S~i~--~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e---~~~----~~~~~y~w~i~~~g~~~~~IDas~e  126 (196)
T 3dal_A           56 LPRNLLFKYATNS--EEVIGVMSKEYIPKGTRFGPLIGEIYTNDT---VPK----NANRKYFWRIYSRGELHHFIDGFNE  126 (196)
T ss_dssp             CCTTEEEEECTTS--CCEEEEEESSCBCTTEEECCCCCEEECTTT---CC-------CCTTEEEEEETTEEEEEEECCCT
T ss_pred             CCCCeEEEECCCC--CceeEEEEccccCCCCEEEeccceEcCHHH---hhh----ccCCcceeeeccCCCEEEEEECCCC
Confidence            4334788999998  899999999999999999999999999743   221    23567888766 45   57998763


Q ss_pred             CCCCCCccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEee
Q 015859          228 GSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPY  307 (399)
Q Consensus       228 g~gg~sr~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~y  307 (399)
                      ..                                          ..             ..-||||......+|+..+.+
T Consensus       127 ~~------------------------------------------gN-------------WmRfVn~A~~~~eqNl~a~q~  151 (196)
T 3dal_A          127 EK------------------------------------------SN-------------WMRYVNPAHSPREQNLAACQN  151 (196)
T ss_dssp             TS------------------------------------------SC-------------GGGGCEECSSTTTCCEEEEEE
T ss_pred             CC------------------------------------------Cc-------------eEEeEEecCCcccCCcEEEEE
Confidence            10                                          01             235889988777899998876


Q ss_pred             cCCCCcccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecc
Q 015859          308 DFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYR  375 (399)
Q Consensus       308 DfP~~~~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYR  375 (399)
                      +                                              .-+.+.|+||| .||||++.|.
T Consensus       152 ~----------------------------------------------~~I~y~a~RdI~pGeELlvwYg  174 (196)
T 3dal_A          152 G----------------------------------------------MNIYFYTIKPIPANQELLVWYC  174 (196)
T ss_dssp             T----------------------------------------------TEEEEEESSCBCTTCBCEEEEC
T ss_pred             C----------------------------------------------CEEEEEECcccCCCCEEEEecC
Confidence            1                                              12567999999 9999999996

>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*

Probab=98.49  E-value=1.5e-07  Score=90.78  Aligned_cols=120  Identities=19%  Similarity=0.282  Sum_probs=83.5

Q ss_pred             HHHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeeccCC----eEEe
Q 015859          148 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDG----TVIN  223 (399)
Q Consensus       148 l~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~DG----~vID  223 (399)
                      ++..+-..|.+..|.    ..|.|||..-.+++|++|+-|.|.|.+.......       ..+.|++.--..    .+||
T Consensus       141 ~q~g~~~~l~v~~t~----~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r-------~~~~Y~f~l~~~~~~~~~ID  209 (287)
T 3hna_A          141 VQNGLRARLQLYRTR----DMGWGVRSLQDIPPGTFVCEYVGELISDSEADVR-------EEDSYLFDLDNKDGEVYCID  209 (287)
T ss_dssp             GGGCCCSCEEEEECS----SSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTC-------SCCTTEEESCCSSSSCEEEE
T ss_pred             cCcCCcccEEEEEcC----CCceEEEeCcccCCCCEEEEeeeEEccHHHHhhh-------cccceEEEeccCCCceEEEe
Confidence            344455668888883    5899999999999999999999999986544332       146677653211    3555


Q ss_pred             cCCCCCCCCCccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeE
Q 015859          224 AQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVM  303 (399)
Q Consensus       224 g~pwg~gg~sr~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~  303 (399)
                      +...                                                         -.++.|+||-=   .||+.
T Consensus       210 a~~~---------------------------------------------------------GN~aRFiNHSC---~PN~~  229 (287)
T 3hna_A          210 ARFY---------------------------------------------------------GNVSRFINHHC---EPNLV  229 (287)
T ss_dssp             EEEE---------------------------------------------------------ECGGGGCEECS---SCSEE
T ss_pred             cccc---------------------------------------------------------CCchheeeecC---CCCce
Confidence            4432                                                         12578999974   68987


Q ss_pred             EEeecCCCCcccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeeccc
Q 015859          304 ICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRL  376 (399)
Q Consensus       304 ~~~yDfP~~~~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRl  376 (399)
                      ++.+-...                                      ...-...++|+|+||| .||||+++|..
T Consensus       230 ~~~v~~~~--------------------------------------~d~~~~~i~~~A~RdI~~GEELT~dYg~  265 (287)
T 3hna_A          230 PVRVFMAH--------------------------------------QDLRFPRIAFFSTRLIEAGEQLGFDYGE  265 (287)
T ss_dssp             EEEEESSC--------------------------------------CCTTCCEEEEEESSCBCTTCBCEECCCH
T ss_pred             eEEEEEec--------------------------------------CCCCceeEEEEEcceeCCCCeEEEeCCC
Confidence            76541110                                      1122557899999999 99999999974

>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A

Probab=98.30  E-value=1.4e-06  Score=84.26  Aligned_cols=73  Identities=21%  Similarity=0.212  Sum_probs=48.5

Q ss_pred             HHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccc-cCCCCCCCCCCCeeeeccC-----CeEE
Q 015859          149 KDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQNPYLITRYD-----GTVI  222 (399)
Q Consensus       149 ~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~-ipgyP~vd~~N~YLi~r~D-----G~vI  222 (399)
                      +.-.-..|.+..|.    ..|-|||..-.+++|++|+-|.|.|.+...... ...|-.  ..+.|+|.--.     ..+|
T Consensus       132 q~g~~~~l~v~~t~----~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~--~~~~Y~f~l~~~~~~~~~~I  205 (299)
T 1mvh_A          132 QRGRTLPLEIFKTK----EKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDD--DGITYLFDLDMFDDASEYTV  205 (299)
T ss_dssp             GGCCCSCEEEEECS----SSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCS--CSCCCEEEECSSCSSSCEEE
T ss_pred             cccccccEEEEEcC----CCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhc--cCceEEEEecCCCCCccEEE
Confidence            33344667788775    589999999999999999999999998543321 112211  23568775321     4566


Q ss_pred             ecCCC
Q 015859          223 NAQPW  227 (399)
Q Consensus       223 Dg~pw  227 (399)
                      ||..+
T Consensus       206 Da~~~  210 (299)
T 1mvh_A          206 DAQNY  210 (299)
T ss_dssp             ECSSE
T ss_pred             eCccc
Confidence            66554

>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}

Probab=98.29  E-value=9.6e-07  Score=85.70  Aligned_cols=122  Identities=24%  Similarity=0.334  Sum_probs=80.0

Q ss_pred             CeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccc-cCCCCCCCCCCCeeeecc---CCeEEecCCCC
Q 015859          153 GYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQNPYLITRY---DGTVINAQPWG  228 (399)
Q Consensus       153 Gfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~-ipgyP~vd~~N~YLi~r~---DG~vIDg~pwg  228 (399)
                      -+.|.+-.++ +  ..|-|||..-.+++|++|+-|.|.|.+...... ..-|-.  ..+.|++.--   +..+|||..+|
T Consensus       139 ~~~l~vfrt~-~--~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~--~~~~Y~f~l~~~~~~~~IDa~~~G  213 (300)
T 2r3a_A          139 QYSLCIFRTS-N--GRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDN--KGITYLFDLDYESDEFTVDAARYG  213 (300)
T ss_dssp             CSCEEEEECS-S--SCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCH--HHHHTEEECCSSCSSEEEECSSEE
T ss_pred             cccEEEEEeC-C--CceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhh--ccccEEEEeecCCceEEEeccccc
Confidence            3556554432 1  589999999999999999999999998543221 101110  1235766432   45677776542


Q ss_pred             CCCCCccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeec
Q 015859          229 SGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYD  308 (399)
Q Consensus       229 ~gg~sr~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yD  308 (399)
                                                                            |   ++.|+||--   .||+.+..+-
T Consensus       214 ------------------------------------------------------N---~aRfiNHSC---~PN~~~~~v~  233 (300)
T 2r3a_A          214 ------------------------------------------------------N---VSHFVNHSC---DPNLQVFNVF  233 (300)
T ss_dssp             ------------------------------------------------------C---GGGGCEECS---SCSEEEEEEE
T ss_pred             ------------------------------------------------------C---hHHheecCC---CCCEEEEEEE
Confidence                                                                  1   567999964   6898776541


Q ss_pred             CCCCcccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccC
Q 015859          309 FPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLS  377 (399)
Q Consensus       309 fP~~~~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls  377 (399)
                      +-                +.                     + .-...++|+|+||| .||||++||...
T Consensus       234 ~~----------------~~---------------------d-~~~~~i~~~A~rdI~~GEELt~dY~~~  265 (300)
T 2r3a_A          234 ID----------------NL---------------------D-TRLPRIALFSTRTINAGEELTFDYQMK  265 (300)
T ss_dssp             SS----------------CC---------------------C-TTSCEEEEEESSCBCTTCEEEECGGGS
T ss_pred             ec----------------cC---------------------C-CCceEEEEEEccCCCCCCEEEEECCCC
Confidence            11                00                     0 11345789999999 999999999987

>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}

Probab=98.12  E-value=3.2e-06  Score=81.50  Aligned_cols=45  Identities=13%  Similarity=0.244  Sum_probs=36.9

Q ss_pred             HHHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeecccc
Q 015859          148 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAY  196 (399)
Q Consensus       148 l~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~  196 (399)
                      +++-.-+.|.+.+|.    ..|-|||..-.+++|++|+-|-|.|.+..-
T Consensus       120 ~q~g~~~~l~V~~s~----~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e  164 (290)
T 3bo5_A          120 VQKGLQFHFQVFKTH----KKGWGLRTLEFIPKGRFVCEYAGEVLGFSE  164 (290)
T ss_dssp             GGGCCCSCEEEEECS----SSSEEEEESSCBCTTCEEEECCEEEECHHH
T ss_pred             cccCCcccEEEEEcC----CCcceEeECCccCCCCEEEEEeeEEeCHHH
Confidence            344445678888883    689999999999999999999999998543

>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*

Probab=98.08  E-value=2.1e-06  Score=82.78  Aligned_cols=45  Identities=16%  Similarity=0.195  Sum_probs=37.3

Q ss_pred             HHHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeecccc
Q 015859          148 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAY  196 (399)
Q Consensus       148 l~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~  196 (399)
                      +++-.-..|.+..|.    ..|-|||..-.+++|++|+-|-|.|.+...
T Consensus       127 ~q~g~~~~l~v~~t~----~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e  171 (302)
T 1ml9_A          127 VERGRTVPLQIFRTK----DRGWGVKCPVNIKRGQFVDRYLGEIITSEE  171 (302)
T ss_dssp             HHHCCCSCEEEEECS----SSCEEEECSSCBCTTCEEEECCCEEECHHH
T ss_pred             cccCCccceEEEEcC----CCceEEEECCeeCCCCEEEEEeeEEeCHHH
Confidence            455556678888875    489999999999999999999999998643

>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}

Probab=97.65  E-value=0.00018  Score=63.68  Aligned_cols=28  Identities=11%  Similarity=-0.007  Sum_probs=25.8

Q ss_pred             CCceEEEeEEecCCcEEEEecCeeeccc
Q 015859          168 AGQGLFLCGEANVGAVIAIYPGIIYSPA  195 (399)
Q Consensus       168 AG~GVFl~G~v~~GtVVa~YPGvVY~p~  195 (399)
                      +|.|||.+-.+++|+.++=|-|-+++..
T Consensus        30 ~g~GVfA~~~IpkGt~fGPy~Ge~~~~~   57 (152)
T 3ihx_A           30 FLGGVFSKRRIPKRTQFGPVEGPLVRGS   57 (152)
T ss_dssp             TTCSEEESSCBCSSCEECCCCSCEECST
T ss_pred             cCCeEEECceecCCCEEEeeccEEcCHH
Confidence            4789999999999999999999999874

>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}

Probab=97.59  E-value=0.00016  Score=68.75  Aligned_cols=114  Identities=12%  Similarity=0.099  Sum_probs=79.2

Q ss_pred             cHHHHHHHHHHHhCeEEeecCCCCCcCCCCceEEE-eEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeecc-
Q 015859          140 TRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFL-CGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY-  217 (399)
Q Consensus       140 ~~~~vs~~l~~~lGfsl~vk~SsIph~~AG~GVFl-~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~-  217 (399)
                      +++.+      .|==.|.+++|+|+    |.|||+ +-.+++|+.++=|-|.+++..           .+.|.|++.-+ 
T Consensus        64 ~RA~l------SLP~~L~vr~S~i~----~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~-----------ea~~~y~wei~~  122 (237)
T 3ray_A           64 DRAAL------TIPQGMEVVKDTSG----ESDVRCVNEVIPKGHIFGPYEGQISTQD-----------KSAGFFSWLIVD  122 (237)
T ss_dssp             THHHH------TCCTTEEEEECTTS----CEEEEECSSCBCTTEEECCCCSEEECC----------------CCEEEEEC
T ss_pred             ChHHh------cCCCCeEEEEcCCC----CcceEEEeCcCCCCCEEEecccEEcChH-----------HccccceEEEEc
Confidence            56655      34333678899874    468998 578999999999999998752           12355766554 


Q ss_pred             -CCe--EEecCCCCCCCCCccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCC
Q 015859          218 -DGT--VINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHP  294 (399)
Q Consensus       218 -DG~--vIDg~pwg~gg~sr~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHp  294 (399)
                       +|.  +|||.+-..                                          ..|             ..||||.
T Consensus       123 ~~g~~~~IDgsde~~------------------------------------------gNW-------------mRfVn~A  147 (237)
T 3ray_A          123 KNNRYKSIDGSDETK------------------------------------------ANW-------------MRYVVIS  147 (237)
T ss_dssp             TTSCEEEEECCCTTT------------------------------------------SCG-------------GGGCEEC
T ss_pred             CCCcEEEEecCCCCC------------------------------------------Ccc-------------eeEEEcC
Confidence             343  788876310                                          012             3588998


Q ss_pred             CCCCCCCeEEEeecCCCCcccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeee
Q 015859          295 AKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLN  373 (399)
Q Consensus       295 p~g~~pNV~~~~yDfP~~~~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflN  373 (399)
                      .....+|+.++.++                                              .-+-+.|+||| .||||++.
T Consensus       148 r~~~EqNL~A~q~~----------------------------------------------~~Iyy~a~RdI~pGeELlVw  181 (237)
T 3ray_A          148 REEREQNLLAFQHS----------------------------------------------ERIYFRACRDIRPGEWLRVW  181 (237)
T ss_dssp             CCTTTCCEEEEEET----------------------------------------------TEEEEEESSCBCTTCBCEEE
T ss_pred             CCcccccceeEEeC----------------------------------------------CEEEEEEccccCCCCEEEEe
Confidence            87778999998762                                              12456899999 99999999


Q ss_pred             cc
Q 015859          374 YR  375 (399)
Q Consensus       374 YR  375 (399)
                      |.
T Consensus       182 Yg  183 (237)
T 3ray_A          182 YS  183 (237)
T ss_dssp             EC
T ss_pred             eC
Confidence            96

>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}

Probab=97.26  E-value=0.0006  Score=64.89  Aligned_cols=41  Identities=15%  Similarity=0.146  Sum_probs=32.7

Q ss_pred             hCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeec
Q 015859          152 IGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYS  193 (399)
Q Consensus       152 lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~  193 (399)
                      -||.+.--.- ......|.|||..-.+++|++|..|.|.+..
T Consensus       103 ~g~eV~~~~R-y~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~  143 (247)
T 3rq4_A          103 SGFTILPCTR-YSMETNGAKIVSTRAWKKNEKLELLVGCIAE  143 (247)
T ss_dssp             GCEEEEECCC-CTTCSSCEEEEESSCBCTTCEEEEEEEEEEE
T ss_pred             CCcEEEeeee-eeecCCcceEEeCCccCCCCEEEEEEeEEEe
Confidence            5998875431 1223679999999999999999999999975

>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}

Probab=96.87  E-value=0.0011  Score=64.09  Aligned_cols=41  Identities=17%  Similarity=0.155  Sum_probs=32.0

Q ss_pred             hCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeec
Q 015859          152 IGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYS  193 (399)
Q Consensus       152 lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~  193 (399)
                      .||.+..-.--. .+..|.|||..-.+++|++|.-|.|.|-.
T Consensus       131 ~gfeV~~~~ry~-~e~~G~GlfA~~~I~kGe~I~EY~Geii~  171 (273)
T 3s8p_A          131 SGFEILPCNRYS-SEQNGAKIVATKEWKRNDKIELLVGCIAE  171 (273)
T ss_dssp             GCEEEEEECCCT-TCSSEEEEEESSCBCTTCEEEEEEEEEEE
T ss_pred             CCceEEecccee-ecCCCceEEECCccCCCCEEEEEEEEEcc
Confidence            388877644211 23679999999999999999999998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	399
d2f69a2	171	Histone H3 K4-specific methyltransferase SET7/9 ca	99.53
d2g46a1	119	Viral histone H3 Lysine 27 Methyltransferase {Para	98.86
d1mvha_	269	SET domain of Clr4 {Fission yeast (Schizosaccharom	98.67
d1ml9a_	284	Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}	98.24
d2h2ja2	261	RuBisCo LSMT catalytic domain {Garden pea (Pisum s	88.54

>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.4e-14  Score=126.87  Aligned_cols=132  Identities=25%  Similarity=0.309  Sum_probs=95.6

Q ss_pred             EeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccccCCCCCCCCCCCeeeeccCCeEEecCCCCCCCCCcc
Q 015859          156 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRE  235 (399)
Q Consensus       156 l~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~ipgyP~vd~~N~YLi~r~DG~vIDg~pwg~gg~sr~  235 (399)
                      +.+++|+||  +||.|||.+-.+++|++|+-|+|.+.+........     ...+.|++.-.++.++|+.....  .   
T Consensus        23 v~v~~S~Ip--~~G~GlFA~~~I~kG~~I~~Y~G~~i~~~e~~~~~-----~~~~~y~~~l~~~~~~d~~~~~~--~---   90 (171)
T d2f69a2          23 VYVAESLIS--SAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRD-----WALNGNTLSLDEETVIDVPEPYN--H---   90 (171)
T ss_dssp             EEEEECSST--TCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSC-----GGGCSSCEECSSSCEEECCTTTT--S---
T ss_pred             EEEEeeccC--CCceehccCcccCCCCEEEEeeeEEECHHHHhhhh-----hhccccEEEeccceeecCCcccc--c---
Confidence            789999998  79999999999999999999999999865433321     12456888878888888876420  0   


Q ss_pred             ccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCccc
Q 015859          236 LWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKD  315 (399)
Q Consensus       236 ~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~~~  315 (399)
                              +                                    ...-..+|.|+||-.   .||+.+.......    
T Consensus        91 --------~------------------------------------~~~~g~~~rfiNHsc---~pN~~~~~~~~~~----  119 (171)
T d2f69a2          91 --------V------------------------------------SKYCASLGHKANHSF---TPNCIYDMFVHPR----  119 (171)
T ss_dssp             --------T------------------------------------TTCCSCCGGGCEECS---SCSEEEEEEEETT----
T ss_pred             --------c------------------------------------cccccCcceeeEccC---CCCceEEEEEecC----
Confidence                    0                                    000123577999964   5898776552111    


Q ss_pred             ccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccCCCC------CCCCccc
Q 015859          316 MRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNSK------RRPVWYS  387 (399)
Q Consensus       316 LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~~------~~P~WY~  387 (399)
                                                           .-+.+.|+|+||| .|||||+||.+.-..      ..|+||.
T Consensus       120 -------------------------------------~~~~i~~~A~RdI~~GEEL~~dYG~~~~~~~~~~p~~p~w~~  161 (171)
T d2f69a2         120 -------------------------------------FGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAPEWYQ  161 (171)
T ss_dssp             -------------------------------------TEEEEEEEESSCBCTTCEEEECCCCCSCCC-----CSCHHHH
T ss_pred             -------------------------------------CCeEEEEEEccCcCCCCEEEEEeCCCCCCcccCCCCCcHHHH
Confidence                                                 1345778999999 999999999976433      5788985

>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Viral histone H3 Lysine 27 Methyltransferase
domain: Viral histone H3 Lysine 27 Methyltransferase
species: Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]

Probab=98.86  E-value=2.5e-09  Score=87.04  Aligned_cols=41  Identities=17%  Similarity=0.169  Sum_probs=34.4

Q ss_pred             EeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeecccccccc
Q 015859          156 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYI  200 (399)
Q Consensus       156 l~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~i  200 (399)
                      +.+++|.    .+|.|||.+-.+++|++|.-|+|++.....+..+
T Consensus         6 v~v~~s~----~~G~GvfA~~~i~~g~~i~~~~g~~~~~~~~~~~   46 (119)
T d2g46a1           6 VIVKKSP----LGGYGVFARKSFEKGELVEECLCIVRHNDDWGTA   46 (119)
T ss_dssp             CEECCCS----SCSSCEEECSCBCTTCCCEEEECEEECSTHHHHH
T ss_pred             EEEEEcC----CCceEEEECchhhCCCEEecccEEEecHHHHhhh
Confidence            6788884    4899999999999999999999999886544433

>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: SET domain of Clr4
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.67  E-value=3e-08  Score=92.36  Aligned_cols=129  Identities=23%  Similarity=0.290  Sum_probs=85.3

Q ss_pred             HHHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccccccc-cCCCCCCCCCCCeeeecc-----CCeE
Q 015859          148 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQNPYLITRY-----DGTV  221 (399)
Q Consensus       148 l~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~~~~~-ipgyP~vd~~N~YLi~r~-----DG~v  221 (399)
                      ++.-.-+.|.|..|.    ..|-|||..-.+++|++|+.|-|.|.+..-... ..-|.  +....|++...     +..+
T Consensus       130 ~q~g~~~~leV~~t~----~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~y~--~~~~~~~~~l~~~~~~~~~~  203 (269)
T d1mvha_         130 VQRGRTLPLEIFKTK----EKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYD--DDGITYLFDLDMFDDASEYT  203 (269)
T ss_dssp             GGGCCCSCEEEEECS----SSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCC--SCSCCCEEEECSSCSSSCEE
T ss_pred             cCCCCccCEEEEEcC----CCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHhHh--hcCCcchhheecccccccce
Confidence            444556678888884    589999998899999999999999988533221 11111  11234554322     2344


Q ss_pred             EecCCCCCCCCCccccCCCCcCcCCCCCCCcCcCchhHHHhhcCCCCCCCCCCCcccccccChhhhhhhhcCCCCCCCCC
Q 015859          222 INAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPN  301 (399)
Q Consensus       222 IDg~pwg~gg~sr~~~~g~~~~~~~~~~~~a~~~~d~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pN  301 (399)
                      ||+..+|                                                         .+++|+||-   -.||
T Consensus       204 iDa~~~G---------------------------------------------------------N~aRFiNHS---C~PN  223 (269)
T d1mvha_         204 VDAQNYG---------------------------------------------------------DVSRFFNHS---CSPN  223 (269)
T ss_dssp             EECSSEE---------------------------------------------------------CGGGGCEEC---SSCS
T ss_pred             eeeeecC---------------------------------------------------------cceEEeecC---CCCC
Confidence            5544431                                                         247899995   3699


Q ss_pred             eEEEeecCCCCcccccccCCccccCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccC-CCceeeeecccCCCC
Q 015859          302 VMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNSK  380 (399)
Q Consensus       302 V~~~~yDfP~~~~~LR~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~~  380 (399)
                      +.+..+-+                ..                      ....+.-|+|+|+||| .||||+.||.++.+.
T Consensus       224 ~~~~~v~~----------------~~----------------------~~~~~~~i~~fA~rdI~~GEELt~DYG~~~d~  265 (269)
T d1mvha_         224 IAIYSAVR----------------NH----------------------GFRTIYDLAFFAIKDIQPLEELTFDYAGAKDF  265 (269)
T ss_dssp             EEEEEEES----------------CT----------------------TCTTSCEEEEEESSCBCTTCBCEECCCTTSSS
T ss_pred             cEEEEEEe----------------cC----------------------CcCccceEEEEECCccCCCCEEEEecCCCcCC
Confidence            98776511                10                      1122456789999999 999999999988654

>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Dim-5
species: Fungus (Neurospora crassa) [TaxId: 5141]

Probab=98.24  E-value=1.5e-07  Score=87.40  Aligned_cols=44  Identities=16%  Similarity=0.204  Sum_probs=37.1

Q ss_pred             HHHHhCeEEeecCCCCCcCCCCceEEEeEEecCCcEEEEecCeeeccc
Q 015859          148 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPA  195 (399)
Q Consensus       148 l~~~lGfsl~vk~SsIph~~AG~GVFl~G~v~~GtVVa~YPGvVY~p~  195 (399)
                      ++.-+-+.|.|..|  +  ..|-|||..-.+++|++|+-|-|.|.+..
T Consensus       119 ~q~g~~~~lev~kt--~--~kG~Gv~a~~~I~kGt~I~eY~Gevi~~~  162 (284)
T d1ml9a_         119 VERGRTVPLQIFRT--K--DRGWGVKCPVNIKRGQFVDRYLGEIITSE  162 (284)
T ss_dssp             HHHCCCSCEEEEEC--S--SSCEEEECSSCBCTTCEEEECCCEEECHH
T ss_pred             ccCCCccCEEEEEc--C--CCceEEeeCCCcCCCCEEEEecCcccCHH
Confidence            45556677889988  3  57999999999999999999999998853

>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.54  E-value=0.074  Score=45.53  Aligned_cols=22  Identities=27%  Similarity=0.357  Sum_probs=19.5

Q ss_pred             CCCceEEEeEEecCCcEEEEec
Q 015859          167 EAGQGLFLCGEANVGAVIAIYP  188 (399)
Q Consensus       167 ~AG~GVFl~G~v~~GtVVa~YP  188 (399)
                      .+|+|||.+..+++|++|.--|
T Consensus        30 ~~GrGl~AtrdI~~Ge~il~vP   51 (261)
T d2h2ja2          30 TEGLGLVALKDISRNDVILQVP   51 (261)
T ss_dssp             TTEEEEECSSCCCTTCEEEEEE
T ss_pred             CceeEEEECCcCCCCCEEEEeC
Confidence            6799999999999999988755