Citrus Sinensis ID: 015924

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSAFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPNDNNNWGTIRSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccEEEcccccccccccccccccccEEEcccccccccccccccccccccccccccccccEEcccccEEEEEEEEEEEcccccccccccccEEEccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHccccccEEEEEccccccccccccccHHcccccEEcccccccEcccccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccHHHHccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mddkneidkiddvmlpgfrfhptdeELVGFYLKRkiqhrplpielikqvdiykydpwdlpklatagekewyfycprdrkyrnsarpnrvtgagfwkatgtdrpiyssdgtkciglkKSLVFYRGRaakgiktdwmmhefrlpsltysapqkklldktippndaWAICRIFKKTNSMAQRALshswispfpetaasdilnqgarctqfssenvsCTTEIGSVIQlcgnndlqqasttsfsafdiptykplypplykpslppastgdlrnnfmflppefsgpnectndapsmlpntAIFENIIkgsennievegqqqqsrgfsisvpqdmqgnitmeedetagsrknpndnnnwgtirsvgfpfslplnmpdawksnlpwdsppctsemsttystnncyt
Flexible Loop (DISEMBL)
mddkneidkiddvmlpgfrfhptDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPklatagekewyfycprdrkyrnsarpnrvtgagfwkatgtdrpiyssdgtkciglkksLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSAFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEdetagsrknpndnnnwGTIRSVGFPFSLPLNMPDAWKSNLPWDsppctsemsttystnncyt
Low Complexity Region (SEG)
MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSAFDIptykplypplykpslppASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPNDNNNWGTIRSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT
Disordered region (IsUnstruct)
*********IDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSAFDIPTYKPLYPPLYK**************FMFL********************TAIFENII**************************************************WGTIRSVGFPFSLPLNMPDAWKS************************
Disordered Region (DISOPRED)
****************GFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSL*****************DAWAICRIFK******************************************************************************************************************************************************************************************VGFPFSLPLNMPDAWKSNLPWDSPPCTSE*STTY****C**
Disordered Region (DISEMBL)
MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSAFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITME*********NPNDNNNWGTIRSVGFPFSLPLNMPDAWKSNLPWDSPPCTS*************
Disordered Region (DISPRO)
***********DVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSL***********KTIPPNDAWAICRIFKKTN***************************************************************FSAFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFENI***************************************************WGTIRSVGFPFSLPLNMPDAWKSNLPWDSPPCTSE*ST*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSAFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPNDNNNWGTIRSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	398	2.2.26 [Sep-21-2011]
Q9ZVH0	418	Protein FEZ OS=Arabidopsi	yes	no	0.809	0.770	0.521	5e-86
Q9FIW5	337	Putative NAC domain-conta	no	no	0.472	0.557	0.705	1e-83
Q9SK55	275	Transcription factor JUNG	no	no	0.381	0.552	0.633	2e-59
Q8H4S4	425	NAC transcription factor	no	no	0.417	0.390	0.535	5e-52
A2YMR0	425	NAC transcription factor	N/A	no	0.417	0.390	0.524	4e-51
A0SPJ6	396	NAC transcription factor	N/A	no	0.472	0.474	0.467	4e-51
A0SPJ9	402	NAC transcription factor	N/A	no	0.472	0.467	0.462	9e-51
A0SPJ8	406	NAC transcription factor	N/A	no	0.407	0.399	0.543	4e-50
D2SMN4	406	NAC transcription factor	N/A	no	0.407	0.399	0.543	7e-50
A0SPJ4	405	NAC transcription factor	N/A	no	0.472	0.464	0.459	1e-49

>sp|Q9ZVH0|FEZ_ARATH Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1

 Score =  318 bits (815), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 226/349 (64%), Gaps = 27/349 (7%)

Query: 1   MDDKNEI--DKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWD 58
           M D+N     K++DV+LPGFRFHPTDEELV FYLKRK+QH PL IELI+Q+DIYKYDPWD
Sbjct: 1   MGDRNNDGDQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWD 60

Query: 59  LPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKS 118
           LPK A  GEKEWYFYCPRDRKYRNS+RPNRVTGAGFWKATGTDRPIYSS+G KCIGLKKS
Sbjct: 61  LPKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKS 120

Query: 119 LVFYRGRAAKGIKTDWMMHEFR-LPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMA 177
           LVFY+GRAAKG+KTDWMMHEFR       S P K+  D  + PND+WAICRIFKKTN+  
Sbjct: 121 LVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNTTT 180

Query: 178 QRALSHSWISPF-PETAASDILNQGARCT-QFSSENVSCTTEIGSVIQLCGNNDLQQAST 235
            RALSHS++S   PET+   + NQ    T  FSS+ +    +  S  Q    N +    T
Sbjct: 181 LRALSHSFVSSLPPETSTDTMSNQKQSNTYHFSSDKI---LKPSSHFQFHHEN-MNTPKT 236

Query: 236 TSFSAFDIPTYKPL----YPPLYKPS--LPPASTGD---LRNNFMFLPPEFSGPN----E 282
           ++ +   +PT  P     +    KP+    P S  D   L N  +FL  + + P      
Sbjct: 237 SNSTTPSVPTISPFSYLDFTSYDKPTNVFNPVSCLDQQYLTN--LFLATQETQPQFPRLP 294

Query: 283 CTNDAPSMLPNTAIFENIIKGSENNIEVEG--QQQQSRGFSISVPQDMQ 329
            +N+ PS L NT+     +    ++I++     Q+Q     +S+PQ+ Q
Sbjct: 295 SSNEIPSFLLNTSSDSTFLGEFTSHIDLSAVLAQEQCPPL-VSLPQEYQ 342

Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=4 SV=1

 Score =  310 bits (794), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 144/204 (70%), Positives = 167/204 (81%), Gaps = 16/204 (7%)

Query: 1   MDDK--NEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWD 58
           MDD+  N +++ DDV+LPGFRFHPTDEELV FYLKRK+ H+ LP +LIK+VDIYKYDPWD
Sbjct: 5   MDDEESNNVERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWD 64

Query: 59  LPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKS 118
           LPKLA  GEKEWYFYCPRDRKYRNS RPNRVTG GFWKATGTDRPIYS D T+CIGLKKS
Sbjct: 65  LPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKS 124

Query: 119 LVFYRGRAAKGIKTDWMMHEFRLPSLT---------YSAPQKKLLD----KTIPPNDAWA 165
           LVFYRGRAAKG+KTDWMMHEFRLPSL+         Y+  ++ L +    K +P NDAWA
Sbjct: 125 LVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWA 184

Query: 166 ICRIFKKTNSM-AQRALSHSWISP 188
           ICRIFKKTN++ +QR++  SW+ P
Sbjct: 185 ICRIFKKTNAVSSQRSIPQSWVYP 208

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SK55|NAC42_ARATH Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana GN=JUB1 PE=1 SV=1

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 102/161 (63%), Positives = 127/161 (78%), Gaps = 9/161 (5%)

Query: 15  LPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYC 74
           LPGFRFHPTDEEL+G+YL+RK++++ + +ELIKQ+DIYKYDPWDLP++++ GEKEWYF+C
Sbjct: 19  LPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFC 78

Query: 75  PRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDW 134
            R RKYRNS RPNRVTG+GFWKATG D+P+YS+    C+GLKKSLV+Y G A KG KTDW
Sbjct: 79  MRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSN--LDCVGLKKSLVYYLGSAGKGTKTDW 136

Query: 135 MMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNS 175
           MMHEFRLPS T +       D      + W +CRIFK+  S
Sbjct: 137 MMHEFRLPSTTKT-------DSPAQQAEVWTLCRIFKRVTS 170

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  205 bits (521), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 97/181 (53%), Positives = 124/181 (68%), Gaps = 15/181 (8%)

Query: 16  PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
           PGFRFHPTDEELV  YLK+K    PLP+ +I +VD+YK+DPWDLP+ A  GE+EWYF+ P
Sbjct: 31  PGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFGEQEWYFFSP 90

Query: 76  RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTK-CIGLKKSLVFYRGRAAKGIKTDW 134
           RDRKY N ARPNR   +G+WKATGTD+PI SS  T+  +G+KK+LVFYRG+  KG+KT+W
Sbjct: 91  RDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGVKTNW 150

Query: 135 MMHEFRLPSLTYSAPQKKLLDKTIPPN------------DAWAICRIFKKTN--SMAQRA 180
           +MHE+RL   + SA       +  PP             D W +CRI+KKTN     QR+
Sbjct: 151 IMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTNKAGAGQRS 210

Query: 181 L 181
           +
Sbjct: 211 M 211

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  202 bits (514), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 15/181 (8%)

Query: 16  PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
           PGFRFHPTDEELV  YLK+K    PLP+ +I +VD+YK+DPW+LP+ A  GE+EWYF+ P
Sbjct: 31  PGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQEWYFFSP 90

Query: 76  RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTK-CIGLKKSLVFYRGRAAKGIKTDW 134
           RDRKY N ARPNR   +G+WKATGTD+PI +S  T+  +G+KK+LVFYRG+  KG+KT+W
Sbjct: 91  RDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVKTNW 150

Query: 135 MMHEFRLPSLTYSAPQKKLLDKTIPPN------------DAWAICRIFKKTN--SMAQRA 180
           +MHE+RL   + SA       +  PP             D W +CRI+KKTN     QR+
Sbjct: 151 IMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTNKAGAGQRS 210

Query: 181 L 181
           +
Sbjct: 211 M 211

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  202 bits (513), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 101/216 (46%), Positives = 137/216 (63%), Gaps = 28/216 (12%)

Query: 16  PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
           PGFRFHPTDEELV  YLK+K    PLP+ +I +VD+YK+DPW+LP+ AT GE+EWYF+ P
Sbjct: 30  PGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYFFSP 89

Query: 76  RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSD-GTKCIGLKKSLVFYRGRAAKGIKTDW 134
           RDRKY N ARPNR   +G+WKATGTD+PI +S  G + +G+KK+LVFYRG+  KG+KT+W
Sbjct: 90  RDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKGLKTNW 149

Query: 135 MMHEFRLPSLTYSAPQKKLLDKTIPPN------------DAWAICRIFKKTNSMA----Q 178
           +MHE+RL   + SA   +      PP             D W +CRI+KK N  A    Q
Sbjct: 150 IMHEYRLTDASSSATTSR------PPPVTGGSRSASLRLDDWVLCRIYKKINKAAAGDQQ 203

Query: 179 RALS-----HSWISPFPETAASDILNQGARCTQFSS 209
           R++         ++ +P  A + +   GA  + + S
Sbjct: 204 RSMECEDSVEDAVTAYPLYATAGMTGAGAHGSNYDS 239

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  201 bits (511), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 100/216 (46%), Positives = 138/216 (63%), Gaps = 28/216 (12%)

Query: 16  PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
           PGFRFHPTDEELV  YLK+K    PLP+ +I +VD+YK+DPW+LP+ AT GE+EWYF+ P
Sbjct: 30  PGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYFFSP 89

Query: 76  RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSD-GTKCIGLKKSLVFYRGRAAKGIKTDW 134
           RDRKY N ARPNR   +G+WKATGTD+PI +S  G + +G+K +LVFYRG+  KG+KT+W
Sbjct: 90  RDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPPKGLKTNW 149

Query: 135 MMHEFRLPSLTYSAPQKKLLDKTIPPN------------DAWAICRIFKKTNSMA----Q 178
           +MHE+RL   + SA   +      PP             D W +CRI+KK N  A    Q
Sbjct: 150 IMHEYRLTDASSSAATSR------PPPVTGGSRAASLRLDDWVLCRIYKKINKAAAADQQ 203

Query: 179 RALS-----HSWISPFPETAASDILNQGARCTQFSS 209
           R++         ++ +P  A + +  +GA  + ++S
Sbjct: 204 RSMECEDSVEDAVTAYPPYATACMTGEGAHGSNYAS 239

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  199 bits (505), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 94/173 (54%), Positives = 121/173 (69%), Gaps = 11/173 (6%)

Query: 16  PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
           PGFRFHPTDEELV  YLK+K    PLP+ +I +VD+YK+DPW+LP+ AT GE EWYF+ P
Sbjct: 37  PGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFFSP 96

Query: 76  RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSD---GTKCIGLKKSLVFYRGRAAKGIKT 132
           RDRKY N ARPNR   +G+WKATGTD+PI +S    G + +G+KK+LVFYRG+  +G+KT
Sbjct: 97  RDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGLKT 156

Query: 133 DWMMHEFRLP-----SLTYSAPQKKLLDKTIPPN---DAWAICRIFKKTNSMA 177
           +W+MHE+RL      S T S P         P +   D W +CRI+KKT+  A
Sbjct: 157 NWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAA 209

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  198 bits (503), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 94/173 (54%), Positives = 121/173 (69%), Gaps = 11/173 (6%)

Query: 16  PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
           PGFRFHPTDEELV  YLK+K    PLP+ +I +VD+YK+DPW+LP+ AT GE EWYF+ P
Sbjct: 37  PGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFFSP 96

Query: 76  RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSD---GTKCIGLKKSLVFYRGRAAKGIKT 132
           RDRKY N ARPNR   +G+WKATGTD+PI +S    G + +G+KK+LVFYRG+  +G+KT
Sbjct: 97  RDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGLKT 156

Query: 133 DWMMHEFRLP-----SLTYSAPQKKLLDKTIPPN---DAWAICRIFKKTNSMA 177
           +W+MHE+RL      S T S P         P +   D W +CRI+KKT+  A
Sbjct: 157 NWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAA 209

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score =  197 bits (501), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/222 (45%), Positives = 136/222 (61%), Gaps = 34/222 (15%)

Query: 16  PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
           PGFRFHPTDEELV  YLK+K    PLP+ +I +VD+YK+DPW+LP+ AT GE+EWYF+ P
Sbjct: 36  PGFRFHPTDEELVVHYLKKKADKAPLPVNIIAEVDLYKFDPWELPEKATIGEQEWYFFSP 95

Query: 76  RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKC------IGLKKSLVFYRGRAAKG 129
           RDRKY N ARPNR   +G+WKATGTD+PI +S GT C      +G+KK+LVFYRG+  KG
Sbjct: 96  RDRKYPNGARPNRAATSGYWKATGTDKPILAS-GTGCGLVREKLGVKKALVFYRGKPPKG 154

Query: 130 IKTDWMMHEFRL-------------PSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSM 176
           +KT+W+MHE+RL             P +T  +     L       D W +CRI+KK N  
Sbjct: 155 LKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRL-----DDWVLCRIYKKINKA 209

Query: 177 A----QRALS-----HSWISPFPETAASDILNQGARCTQFSS 209
           A    QR           ++ +P  A + +   GA  + ++S
Sbjct: 210 AAGDQQRNTECEDSVEDAVTAYPLYATAGMTGAGAHGSNYAS 251

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	398
224140975	400	NAC domain protein, IPR003441 [Populus t	0.992	0.987	0.746	1e-168
224118242	400	NAC domain protein, IPR003441 [Populus t	0.994	0.99	0.738	1e-167
359488924	389	PREDICTED: putative NAC domain-containin	0.962	0.984	0.725	1e-160
255588203	399	NAC domain-containing protein, putative	0.959	0.957	0.689	1e-157
296082921	353	unnamed protein product [Vitis vinifera]	0.874	0.985	0.687	1e-150
225425702	401	PREDICTED: protein FEZ-like [Vitis vinif	0.987	0.980	0.650	1e-148
147828747	402	hypothetical protein VITISV_039190 [Viti	0.987	0.977	0.648	1e-146
296086374	385	unnamed protein product [Vitis vinifera]	0.954	0.987	0.632	1e-141
255562844	411	NAC domain-containing protein, putative	0.987	0.956	0.627	1e-131
302399013	382	NAC domain class transcription factor [M	0.934	0.973	0.620	1e-130

>gi|224140975|ref|XP_002323852.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222866854|gb|EEF03985.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 301/403 (74%), Positives = 331/403 (82%), Gaps = 8/403 (1%)

Query: 1   MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLP 60
           M++KN++DKIDDVMLPGFRFHPTDEELVGFYLKRKIQ R LPIELIKQVDIYKYDPWDLP
Sbjct: 1   MEEKNDVDKIDDVMLPGFRFHPTDEELVGFYLKRKIQQRSLPIELIKQVDIYKYDPWDLP 60

Query: 61  K-LATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL 119
           K LAT GEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGT+CIGLKKSL
Sbjct: 61  KELATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTRCIGLKKSL 120

Query: 120 VFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQR 179
           VFYRGRAAKG+KTDWMMHEFRLPSL    P KKLLDK++PPNDAWAICRIFKKTNSMAQR
Sbjct: 121 VFYRGRAAKGMKTDWMMHEFRLPSLAEPPPPKKLLDKSLPPNDAWAICRIFKKTNSMAQR 180

Query: 180 ALSHSWISP-FPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSF 238
           ALSHSW+SP  PET ASD   QGA CTQFSSEN+SCTTEIGS   L  NND QQAS    
Sbjct: 181 ALSHSWVSPVLPETTASDFFAQGAHCTQFSSENMSCTTEIGSNFHLGSNNDFQQASPAGL 240

Query: 239 SAFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFE 298
           S  DIP+Y+P+ P ++   + P S GDL NNF+F P E SGP + T+DAPSML N A+  
Sbjct: 241 SVLDIPSYRPINPIVHTSYIFPVSNGDLPNNFLFSPLENSGPIKSTDDAPSMLLNPALMG 300

Query: 299 NIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPN---DNNNWGTI 355
              K SE+    EG QQQ  GFSI++ Q+MQG+I    DET G RKNP+   DNN +GTI
Sbjct: 301 EAGKASEST-GYEGSQQQFNGFSINLLQEMQGDIGT-GDET-GLRKNPSSIQDNNLFGTI 357

Query: 356 RSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
           RS+GFPFSLP N+PDAWKSNLPWDSP C SEMSTTYSTN C+T
Sbjct: 358 RSIGFPFSLPSNLPDAWKSNLPWDSPSCPSEMSTTYSTNKCHT 400

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118242|ref|XP_002331505.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222873841|gb|EEF10972.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/402 (73%), Positives = 325/402 (80%), Gaps = 6/402 (1%)

Query: 1   MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLP 60
           MD+KN++DKIDDVMLPGFRFHPTDEELVGFYLKRKIQ R LPIELIKQVDIYKYDPWDLP
Sbjct: 1   MDEKNDVDKIDDVMLPGFRFHPTDEELVGFYLKRKIQQRSLPIELIKQVDIYKYDPWDLP 60

Query: 61  K-LATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL 119
           K LAT GEKE YFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL
Sbjct: 61  KELATTGEKELYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL 120

Query: 120 VFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQR 179
           VFYRGRAAKGIKTDWMMHEFRLPSL   +P KKLLDK++P NDAWAICRIFKKTNSMAQR
Sbjct: 121 VFYRGRAAKGIKTDWMMHEFRLPSLAEPSPPKKLLDKSLPANDAWAICRIFKKTNSMAQR 180

Query: 180 ALSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFS 239
           ALSHSW+SP P+T ASD+  QGA   QF SEN+SC TEIGS   +  N+D QQAS  SFS
Sbjct: 181 ALSHSWVSPLPDTTASDLFAQGAHFPQFCSENMSCVTEIGSSFHIGSNSDFQQASPASFS 240

Query: 240 AFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFEN 299
             DIP+YKP+ P +YK  L P S GDL NNF+    E SGP + T+DA SML N A+   
Sbjct: 241 VLDIPSYKPINPAVYKSYLCPVSNGDLSNNFLCSQLEISGPIKSTDDAHSMLLNPALIGE 300

Query: 300 IIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNP---NDNNNWGTIR 356
             K SE +IE EG QQQ  GFSI++ Q+MQGN    +DE AG RKNP   ++NN  GTIR
Sbjct: 301 AGKTSE-SIEYEGSQQQFNGFSINLLQEMQGNTGTGDDE-AGFRKNPSSIHENNLVGTIR 358

Query: 357 SVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
           S+GFPFSLP N+ DAWKSNL WDSP C SEMSTTYSTN C T
Sbjct: 359 SIGFPFSLPSNLADAWKSNLAWDSPSCHSEMSTTYSTNKCNT 400

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488924|ref|XP_002278256.2| PREDICTED: putative NAC domain-containing protein 94-like [Vitis vinifera]

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 293/404 (72%), Positives = 327/404 (80%), Gaps = 21/404 (5%)

Query: 1   MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLP 60
           M ++N+ DK+DDVMLPGFRFHPTDEELVGFYLKRKIQ R LPIELIKQVDIYKYDPWDLP
Sbjct: 1   MAERNDTDKMDDVMLPGFRFHPTDEELVGFYLKRKIQQRSLPIELIKQVDIYKYDPWDLP 60

Query: 61  KLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLV 120
           KLAT GEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGT+CIGLKKSLV
Sbjct: 61  KLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTRCIGLKKSLV 120

Query: 121 FYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRA 180
           FYRGRAAKGIKTDWMMHEFRLPSL  SAP KKLLDK++PPND+WAICRIFKKTNSMAQRA
Sbjct: 121 FYRGRAAKGIKTDWMMHEFRLPSLGDSAPPKKLLDKSLPPNDSWAICRIFKKTNSMAQRA 180

Query: 181 LSHSWIS-PFPETA-ASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSF 238
           LSHSW+S PFP TA  +DIL+ GA CTQFSSEN+SCTTE GS I LC NNDLQQAS  SF
Sbjct: 181 LSHSWVSPPFPATAMTADILSHGAHCTQFSSENISCTTENGSSIDLCCNNDLQQASPASF 240

Query: 239 SAFDIPTYKPLYPPLYKPSL-PPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIF 297
           SA DIP+YK + P   KPS+ P  + GDL+N+ MFLP E  G       +P +L      
Sbjct: 241 SALDIPSYKAINPAACKPSMFPIPNAGDLQNSSMFLPLEVPG------SSPGLL------ 288

Query: 298 ENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPN---DNNNWGT 354
            N+  GS+ +I+  G QQQ  GFSIS+P+D+QGNI   E++T G RK+ +    NN  G 
Sbjct: 289 -NLPLGSD-SIDFGGPQQQFNGFSISLPEDLQGNIHTGEEDT-GFRKSASAGQANNPCGN 345

Query: 355 IRSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
           IRS+GFPFSLP N+ D WK NLPWDSPPC SEMST+YSTN  YT
Sbjct: 346 IRSIGFPFSLPSNVADPWKLNLPWDSPPCPSEMSTSYSTNKGYT 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255588203|ref|XP_002534534.1| NAC domain-containing protein, putative [Ricinus communis] gi|223525097|gb|EEF27849.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 286/415 (68%), Positives = 323/415 (77%), Gaps = 33/415 (7%)

Query: 1   MDDKNEIDK-IDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDL 59
           M++K+++DK IDDVMLPGFRFHPTDEELVGFYLKRKIQ R LPIELIKQVDIYKYDPWDL
Sbjct: 1   MEEKHDVDKNIDDVMLPGFRFHPTDEELVGFYLKRKIQQRSLPIELIKQVDIYKYDPWDL 60

Query: 60  PKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL 119
           PKLAT GEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL
Sbjct: 61  PKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL 120

Query: 120 VFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQR 179
           VFYRGRAAKG+KTDWMMHEFRLPS+   +P KK LDK++PPNDAWAICRIFKKTNSMAQR
Sbjct: 121 VFYRGRAAKGMKTDWMMHEFRLPSVAEPSPPKKFLDKSLPPNDAWAICRIFKKTNSMAQR 180

Query: 180 ALSHSWISPFPETAASDILNQGA----RCTQFSSENVSCTTEIGSVIQLCGNNDLQQAST 235
           AL+HSWI+  PET A DILNQGA     CTQ+SSEN+SCTTEIGSV Q+C N DLQQAS+
Sbjct: 181 ALNHSWITQLPETTAPDILNQGAAAAGHCTQYSSENISCTTEIGSVFQICSNTDLQQASS 240

Query: 236 TSFSAFDIPTYKPLYPPLYKPSLPPASTGDLR-----NNFMFLPPEFSGPNEC--TNDAP 288
           ++FSA DI +YKP+ P + KPSL P S GD       NNFMF P E SG N+C  T DA 
Sbjct: 241 SNFSAIDISSYKPINPAIEKPSLFPVSNGDHHHHLPNNNFMFSPLEMSGQNKCSTTIDAS 300

Query: 289 S-MLPNTAIFENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNP- 346
           + ML N A        SE+    E +  Q  GFSI +PQ+ QG++    DE +  RKN  
Sbjct: 301 NCMLLNPA--------SESIDFQEPEHHQYNGFSIRLPQETQGHMDAGIDEASALRKNQS 352

Query: 347 ---NDNNNWGTIRSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
              +D+N WG +RS+ FPF+LP        +NLPWDSPPC SEMS+ YSTN CYT
Sbjct: 353 GIHHDSNQWGNMRSISFPFNLP--------TNLPWDSPPCPSEMSSAYSTNKCYT 399

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082921|emb|CBI22222.3| unnamed protein product [Vitis vinifera]

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 277/403 (68%), Positives = 303/403 (75%), Gaps = 55/403 (13%)

Query: 1   MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLP 60
           M ++N+ DK+DDVMLPGFRFHPTDEELVGFYLKRKIQ R LPIELIKQVDIYKYDPWDLP
Sbjct: 1   MAERNDTDKMDDVMLPGFRFHPTDEELVGFYLKRKIQQRSLPIELIKQVDIYKYDPWDLP 60

Query: 61  KLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLV 120
           KLAT GEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGT+CIGLKKSLV
Sbjct: 61  KLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTRCIGLKKSLV 120

Query: 121 FYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRA 180
           FYRGRAAKGIKTDWMMHEFRLPSL  SAP KKLLDK++PPND+WAICRIFKKTNSMAQRA
Sbjct: 121 FYRGRAAKGIKTDWMMHEFRLPSLGDSAPPKKLLDKSLPPNDSWAICRIFKKTNSMAQRA 180

Query: 181 LSHSWIS-PFPETA-ASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSF 238
           LSHSW+S PFP TA  +DIL+ GA CTQFSSEN+SCTTE GS I LC NNDLQQAS  SF
Sbjct: 181 LSHSWVSPPFPATAMTADILSHGAHCTQFSSENISCTTENGSSIDLCCNNDLQQASPASF 240

Query: 239 SAFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFE 298
           SA DIP+YK + P   KPS+                                        
Sbjct: 241 SALDIPSYKAINPAACKPSI---------------------------------------- 260

Query: 299 NIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPN---DNNNWGTI 355
                    I+  G QQQ  GFSIS+P+D+QGNI   E++T G RK+ +    NN  G I
Sbjct: 261 ---------IDFGGPQQQFNGFSISLPEDLQGNIHTGEEDT-GFRKSASAGQANNPCGNI 310

Query: 356 RSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
           RS+GFPFSLP N+ D WK NLPWDSPPC SEMST+YSTN  YT
Sbjct: 311 RSIGFPFSLPSNVADPWKLNLPWDSPPCPSEMSTSYSTNKGYT 353

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425702|ref|XP_002270334.1| PREDICTED: protein FEZ-like [Vitis vinifera]

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 262/403 (65%), Positives = 309/403 (76%), Gaps = 10/403 (2%)

Query: 3   DKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKL 62
           ++N+ DK+++VMLPGFRFHPTDEELVGFYLKRKIQ +PL IELIKQ+DIYKYDPWDLPKL
Sbjct: 2   ERNDADKLEEVMLPGFRFHPTDEELVGFYLKRKIQQKPLSIELIKQLDIYKYDPWDLPKL 61

Query: 63  ATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFY 122
           AT GEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS+GTKCIGLKKSLVFY
Sbjct: 62  ATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGTKCIGLKKSLVFY 121

Query: 123 RGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALS 182
           +GRAAKGIKTDWMMHEFRLPSLT SAP K+L+DK++P ND+WAICRIFKKTNSMAQRALS
Sbjct: 122 KGRAAKGIKTDWMMHEFRLPSLTNSAPPKRLMDKSVPANDSWAICRIFKKTNSMAQRALS 181

Query: 183 HSWISPFPETAASDILNQGARCT--QFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSA 240
           HSW+SP PET  SDIL Q AR    QFSSEN+S   +  S    C   DLQQ STT+FS 
Sbjct: 182 HSWVSPLPETTTSDILGQFARNADHQFSSENMSLAAKPSSGFHFCFTEDLQQTSTTTFSP 241

Query: 241 FDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPN--TAIFE 298
             + +YKP+ P   KPS    + GDL  +FM      SGP   T D  SML N  +++  
Sbjct: 242 IHVSSYKPINPIAGKPSQLSTAIGDLHTSFMLSQLGTSGPVTPTVDVSSMLLNMPSSMLG 301

Query: 299 NIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPN---DNNNWGTI 355
           ++ K SE +I+  G +Q   GF +++PQD+QGN+   E+  A   KN N    ++ W ++
Sbjct: 302 DLGKTSE-SIDFSGSEQLCNGFPVTLPQDIQGNVCSGEE--AALLKNLNVIHGDDQWESV 358

Query: 356 RSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
           R++GFPF LPLNM + WK N+ WDS PC SEMST+YSTN CYT
Sbjct: 359 RAMGFPFGLPLNMAEGWKPNMLWDSSPCPSEMSTSYSTNKCYT 401

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147828747|emb|CAN61983.1| hypothetical protein VITISV_039190 [Vitis vinifera]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 262/404 (64%), Positives = 308/404 (76%), Gaps = 11/404 (2%)

Query: 3   DKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPK- 61
           ++N+ DK+++VMLPGFRFHPTDEELVGFYLKRKIQ +PL IELIKQ+DIYKYDPWDLPK 
Sbjct: 2   ERNDADKLEEVMLPGFRFHPTDEELVGFYLKRKIQQKPLSIELIKQLDIYKYDPWDLPKE 61

Query: 62  LATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVF 121
           LAT GEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS+GTKCIGLKKSLVF
Sbjct: 62  LATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGTKCIGLKKSLVF 121

Query: 122 YRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRAL 181
           Y+GRAAKGIKTDWMMHEFRLPSLT SAP K+L+DK++P ND+WAICRIFKKTNSMAQRAL
Sbjct: 122 YKGRAAKGIKTDWMMHEFRLPSLTNSAPPKRLMDKSVPANDSWAICRIFKKTNSMAQRAL 181

Query: 182 SHSWISPFPETAASDILNQGARCT--QFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFS 239
           SHSW+SP PET  SDIL Q AR    QFSSEN+S   +  S    C   DLQQ STT+FS
Sbjct: 182 SHSWVSPLPETTTSDILGQFARNADHQFSSENMSLAAKPSSGFHFCFTEDLQQTSTTTFS 241

Query: 240 AFDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPN--TAIF 297
              + +YKP+ P   KPS    + GDL  +FM      SGP   T D  SML N  +++ 
Sbjct: 242 PIHVSSYKPINPIAGKPSQLSTAIGDLHTSFMLSQLGTSGPVTPTVDVSSMLLNMPSSML 301

Query: 298 ENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPN---DNNNWGT 354
            ++ K SE +I+  G +Q   GF +++PQD+QGN+   E+  A   KN N    ++ W  
Sbjct: 302 GDLGKTSE-SIDFSGSEQLCNGFPVTLPQDIQGNVCSGEE--AALLKNLNVIHGDDQWEX 358

Query: 355 IRSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
           +R++GFPF LPLNM + WK N+ WDS PC SEMST+YSTN CYT
Sbjct: 359 VRAMGFPFGLPLNMAEGWKPNMLWDSSPCPSEMSTSYSTNKCYT 402

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086374|emb|CBI31963.3| unnamed protein product [Vitis vinifera]

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/400 (63%), Positives = 300/400 (75%), Gaps = 20/400 (5%)

Query: 3   DKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKL 62
           ++N+ DK+++VMLPGFRFHPTDEELVGFYLKRKIQ +PL IELIKQ+DIYKYDPWDLPKL
Sbjct: 2   ERNDADKLEEVMLPGFRFHPTDEELVGFYLKRKIQQKPLSIELIKQLDIYKYDPWDLPKL 61

Query: 63  ATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFY 122
           AT GEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS+GTKCIGLKKSLVFY
Sbjct: 62  ATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGTKCIGLKKSLVFY 121

Query: 123 RGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALS 182
           +GRAAKGIKTDWMMHEFRLPSLT SAP K+L+DK++P ND+WAICRIFKKTNSMAQRALS
Sbjct: 122 KGRAAKGIKTDWMMHEFRLPSLTNSAPPKRLMDKSVPANDSWAICRIFKKTNSMAQRALS 181

Query: 183 HSWISPFPETAASDILNQGARCT--QFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSA 240
           HSW+SP PET  SDIL Q AR    QFSSEN+S   +  S    C   DLQQ STT+FS 
Sbjct: 182 HSWVSPLPETTTSDILGQFARNADHQFSSENMSLAAKPSSGFHFCFTEDLQQTSTTTFSP 241

Query: 241 FDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPN--TAIFE 298
             + +YKP+ P   KPS    + GDL  +FM      SGP   T D  SML N  +++  
Sbjct: 242 IHVSSYKPINPIAGKPSQLSTAIGDLHTSFMLSQLGTSGPVTPTVDVSSMLLNMPSSMLG 301

Query: 299 NIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITMEEDETAGSRKNPNDNNNWGTIRSV 358
           ++ K SE +I+  G +Q   GF  ++ +++  N+   +D+             W ++R++
Sbjct: 302 DLGKTSE-SIDFSGSEQLCNGFPAALLKNL--NVIHGDDQ-------------WESVRAM 345

Query: 359 GFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
           GFPF LPLNM + WK N+ WDS PC SEMST+YSTN CYT
Sbjct: 346 GFPFGLPLNMAEGWKPNMLWDSSPCPSEMSTSYSTNKCYT 385

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562844|ref|XP_002522427.1| NAC domain-containing protein, putative [Ricinus communis] gi|223538312|gb|EEF39919.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/416 (62%), Positives = 298/416 (71%), Gaps = 23/416 (5%)

Query: 1   MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLP 60
           MD++NE DK+D+VMLPGFRFHPTDEELVGFYLKRKIQ RPL IELIKQ+DIYKYDPWDLP
Sbjct: 1   MDERNEADKMDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLP 60

Query: 61  KLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLV 120
           KLAT GEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS+G KCIGLKKSLV
Sbjct: 61  KLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLV 120

Query: 121 FYRGRAAKGIKTDWMMHEFRLPSLTYSA-PQKKLLDKTIPPNDAWAICRIFKKTNSMAQR 179
           FY+GRAAKGIKTDWMMHEFRLPSLT SA P K+ LDKTIP ND+WAICRIFKKTNS AQR
Sbjct: 121 FYKGRAAKGIKTDWMMHEFRLPSLTDSASPAKRFLDKTIPVNDSWAICRIFKKTNSTAQR 180

Query: 180 ALSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFS 239
           ALS SW+S  PETA S  L + ++ TQF S+N S TT+I +      NN++QQ+  T+FS
Sbjct: 181 ALSQSWVSSIPETAPSSFLAKASQNTQFCSQNTSLTTDISNYY----NNEIQQSFVTNFS 236

Query: 240 AFDIPTYKPLYPPLYKPSLPP--ASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAI- 296
             D  ++KPL P   K S  P   S GDL  NF F   E   P++CT D  SML N +  
Sbjct: 237 PLDFSSFKPLNPLSSKLSHNPHSISNGDLHGNFFFSHLETLAPSKCTVDVSSMLLNMSSS 296

Query: 297 ----FENIIKGSENNIEVEGQ-QQQSRGFS--ISVPQDMQGNITMEEDETAGSRKNPNDN 349
               F       +++I+  G  Q     FS   S PQ MQ N     DE     KNPN  
Sbjct: 297 VLGDFSKAANDHQSSIDYGGVPQDHCSDFSSLTSFPQAMQVNNASHGDENM-PLKNPNAM 355

Query: 350 NN----WGTIR-SVGFPFSLPLNM-PDAWKSNLPWDSPPCTS-EMSTTYSTNNCYT 398
            N    W T+R SVGFPFSLP++M  DAWK NL WDS  C S ++ST+++T  CYT
Sbjct: 356 TNIDDQWETVRSSVGFPFSLPMSMGTDAWKQNLLWDSSSCPSDQISTSFATAKCYT 411

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399013|gb|ADL36801.1| NAC domain class transcription factor [Malus x domestica]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/408 (62%), Positives = 299/408 (73%), Gaps = 36/408 (8%)

Query: 1   MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLP 60
           M+ KNE++K+DDVMLPGFRFHPTDEELVGFYLKRKIQ R LPIELIKQVDIYKYDPWDLP
Sbjct: 1   MEQKNEMEKVDDVMLPGFRFHPTDEELVGFYLKRKIQQRVLPIELIKQVDIYKYDPWDLP 60

Query: 61  KLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLV 120
           KLA+ GEKEWYFYCPRDRKY+NS RPNRVTGAGFWKATGTDRPIYSS+G+KCIGLKKSLV
Sbjct: 61  KLASTGEKEWYFYCPRDRKYKNSTRPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLV 120

Query: 121 FYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRA 180
           FYRGRAAKGIKTDWMMHEFRLPSL+ S P KKLLDK++P ND+WAICRIFKKTNSMAQRA
Sbjct: 121 FYRGRAAKGIKTDWMMHEFRLPSLSNSVPPKKLLDKSLPANDSWAICRIFKKTNSMAQRA 180

Query: 181 LSHSWISPFPETAASDILNQGARCTQFSSENVSCTTEIGSVIQLCGNNDLQQASTTSFSA 240
           LSHSW S FPE  A+ +  Q     QFSSEN+SCTT++GS +Q   NNDLQQAS T++S+
Sbjct: 181 LSHSWDSQFPEPRAAGLFTQ-----QFSSENMSCTTDMGSTMQFWNNNDLQQASNTNYSS 235

Query: 241 FDIPTYKPLYPPLYKPSLPPASTGDLRNNFMFLPPEFSGPNECTNDAPSMLPNTAIFENI 300
           FD   YKP+ P + KPS+     G+  N+ MF P E SG        P+++ +       
Sbjct: 236 FDTLPYKPINPTVLKPSM---FDGEFPNSLMFSPAELSGTMN-----PALIGD------- 280

Query: 301 IKGSENNIEVEGQQQQSRGFSISVPQ--DMQGNITMEEDETAGSRKN------PNDNNNW 352
           +  +  +I+ +G QQQ   F IS+ Q   MQGN    E+E  G RKN       N  + W
Sbjct: 281 LSNTVGSIDFDGSQQQFTSFLISLQQQNQMQGNTGSSENE-GGFRKNMSRSSSSNSTSQW 339

Query: 353 G--TIRSVGFPFSLPLNMPDAWKSNLPWDSPPCTSEMSTTYSTNNCYT 398
           G  +IR++GFPFSL  +  +AWK  L    P  +    ++YSTN CYT
Sbjct: 340 GSSSIRTIGFPFSLASD-DEAWKPTL----PSYSPPCPSSYSTNKCYT 382

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	398
TAIR|locus:2202820	418	FEZ "FEZ" [Arabidopsis thalian	0.530	0.504	0.725	1e-86
TAIR|locus:2045570	275	NAC042 "NAC domain containing	0.391	0.567	0.618	4.6e-57
TAIR|locus:2089205	303	AT3G12910 [Arabidopsis thalian	0.454	0.597	0.528	5.8e-50
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.412	0.512	0.551	1.4e-48
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.402	0.439	0.552	2.9e-48
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.399	0.492	0.548	1.6e-47
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.547	0.698	0.431	2.3e-46
TAIR|locus:2056266	414	LOV1 "LONG VEGETATIVE PHASE 1"	0.354	0.340	0.587	1e-45
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.379	0.563	0.535	3.4e-45
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.447	0.615	0.476	5.6e-45

TAIR|locus:2202820 FEZ "FEZ" [Arabidopsis thaliana (taxid:3702)]

 Score = 847 (303.2 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
 Identities = 156/215 (72%), Positives = 178/215 (82%)

Query:     2 DDKNEID-KIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLP 60
             D  N+ D K++DV+LPGFRFHPTDEELV FYLKRK+QH PL IELI+Q+DIYKYDPWDLP
Sbjct:     3 DRNNDGDQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLP 62

Query:    61 KLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLV 120
             K A  GEKEWYFYCPRDRKYRNS+RPNRVTGAGFWKATGTDRPIYSS+G KCIGLKKSLV
Sbjct:    63 KFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLV 122

Query:   121 FYRGRAAKGIKTDWMMHEFRLPSLTY-SAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQR 179
             FY+GRAAKG+KTDWMMHEFRLPSL+  S P K+  D  + PND+WAICRIFKKTN+   R
Sbjct:   123 FYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLR 182

Query:   180 ALSHSWISPFP-ETAASDILNQGARCT-QFSSENV 212
             ALSHS++S  P ET+   + NQ    T  FSS+ +
Sbjct:   183 ALSHSFVSSLPPETSTDTMSNQKQSNTYHFSSDKI 217

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0045770 "positive regulation of asymmetric cell division" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2045570 NAC042 "NAC domain containing protein 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 102/165 (61%), Positives = 129/165 (78%)

Query:    11 DDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEW 70
             ++  LPGFRFHPTDEEL+G+YL+RK++++ + +ELIKQ+DIYKYDPWDLP++++ GEKEW
Sbjct:    15 NEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEW 74

Query:    71 YFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGI 130
             YF+C R RKYRNS RPNRVTG+GFWKATG D+P+YS+    C+GLKKSLV+Y G A KG 
Sbjct:    75 YFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSN--LDCVGLKKSLVYYLGSAGKGT 132

Query:   131 KTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNS 175
             KTDWMMHEFRLPS T +       D      + W +CRIFK+  S
Sbjct:   133 KTDWMMHEFRLPSTTKT-------DSPAQQAEVWTLCRIFKRVTS 170

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010120 "camalexin biosynthetic process" evidence=IMP

GO:0005992 "trehalose biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:1900056 "negative regulation of leaf senescence" evidence=IMP

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2089205 AT3G12910 [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 101/191 (52%), Positives = 128/191 (67%)

Query:     2 DDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQ-HRPLPI-ELIKQVDIYKYDPWDL 59
             D+  E +  D + LPGFRFHPTDEELVG+YL +K+   +   I E++ Q+DIYK+DPWDL
Sbjct:     9 DNTRESEDEDALKLPGFRFHPTDEELVGYYLSKKVLLKKTSKIDEIVSQIDIYKFDPWDL 68

Query:    60 PKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKC-IGLKKS 118
             P+     EKE YF+C R RKYRNS RPNRVTG+GFWKATG D+P+YS    K  IGLKK+
Sbjct:    69 PRSRNT-EKESYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSDGSNKAVIGLKKT 127

Query:   119 LVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPN----DAWAICRIFKKTN 174
             LV+Y G A KG KTDWMMHEFRLP+   + P         P +    + W +CRIFK+T 
Sbjct:   128 LVYYLGSAGKGNKTDWMMHEFRLPTANDTIPGGPTHSNPTPTSLLHAEVWTLCRIFKRT- 186

Query:   175 SMAQRALSHSW 185
              ++ R  +  W
Sbjct:   187 -VSSRKYTPDW 196

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 96/174 (55%), Positives = 122/174 (70%)

Query:    16 PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
             PGFRFHPTDEELV  YLKRK    PLP+ +I  VD+YK+DPW+LP  A+ GE+EWYF+ P
Sbjct:    19 PGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSP 78

Query:    76 RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDG--TKCIGLKKSLVFYRGRAAKGIKTD 133
             RDRKY N ARPNR   +G+WKATGTD+P+ S+ G  +K +G+KK+LVFY G+  KG+K+D
Sbjct:    79 RDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSD 138

Query:   134 WMMHEFRLPSLTYSAPQKKLLDKTIPPN----DAWAICRIFKKTNSMAQRALSH 183
             W+MHE+RL   T + P   + D     N    D W +CRI+KK NS A R   H
Sbjct:   139 WIMHEYRL---TDNKPTH-ICDFGNKKNSLRLDDWVLCRIYKKNNSTASRHHHH 188

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 90/163 (55%), Positives = 118/163 (72%)

Query:    16 PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
             PGFRFHPTDEELV  YLKRK    PLP+ +I +VD+YK+DPW+LP  A+ GE+EWYF+ P
Sbjct:    19 PGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSP 78

Query:    76 RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWM 135
             RDRKY N ARPNR   +G+WKATGTD+P+ +SDG + +G+KK+LVFY G+  KG+K+DW+
Sbjct:    79 RDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSDWI 138

Query:   136 MHEFRL-PSLTYSAPQKKLLD--KTIPPNDAWAICRIFKKTNS 175
             MHE+RL  +   + P        K     D W +CRI+KK N+
Sbjct:   139 MHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNA 181

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 90/164 (54%), Positives = 118/164 (71%)

Query:    16 PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
             PGFRFHPTDEELV  YLK+K    PLP+ +I ++D+YK+DPW+LP  A+ GE EWYF+ P
Sbjct:    18 PGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFFSP 77

Query:    76 RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWM 135
             RDRKY N  RPNR   +G+WKATGTD+PI++ +  K +G+KK+LVFY G+  KGIKTDW+
Sbjct:    78 RDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHK-VGVKKALVFYGGKPPKGIKTDWI 136

Query:   136 MHEFRLP--SLTYSA--PQKKLLDKTIPPNDAWAICRIFKKTNS 175
             MHE+RL   +L+ +A  P      K     D W +CRI+KK +S
Sbjct:   137 MHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSS 180

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 101/234 (43%), Positives = 146/234 (62%)

Query:    12 DVMLP-GFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEW 70
             ++ LP GFRFHPTDEELV FYL R+    P+ + +I ++D+YK++PW+LP++A  GEKEW
Sbjct:    47 ELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEW 106

Query:    71 YFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGI 130
             YF+  RDRKY N +RPNR  G G+WKATG D+PI      K +G+KK+LVFY G+A KGI
Sbjct:   107 YFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKP---KTLGIKKALVFYAGKAPKGI 163

Query:   131 KTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALSHSWISPFP 190
             KT+W+MHE+RL ++  SA   K  +  +   D W +CRI+ K  +M ++ L  +   P  
Sbjct:   164 KTNWIMHEYRLANVDRSASTNKKNNLRL---DDWVLCRIYNKKGTM-EKYLPAAAEKPTE 219

Query:   191 ETAASDILNQGARCTQFS-SENVSCTT--EIGSVIQLCGNNDLQQASTTSFSAF 241
             + + SD     +RC+    S +V+C+   E+ S  +     D  +A     S F
Sbjct:   220 KMSTSD-----SRCSSHVISPDVTCSDNWEVESEPKWINLEDALEAFNDDTSMF 268

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2056266 LOV1 "LONG VEGETATIVE PHASE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 84/143 (58%), Positives = 114/143 (79%)

Query:     1 MDDKNEIDKID-DVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDL 59
             + +++E D  D D+++PGFRFHPT+EEL+ FYL+RK++ +   +ELI  +D+Y+YDPW+L
Sbjct:    37 VQNEDEADDHDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWEL 96

Query:    60 PKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL 119
             P +A  GEKEWYFY PRDRKYRN  RPNRVT +G+WKATG DR I  S+ ++ IGLKK+L
Sbjct:    97 PAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI-RSETSRPIGLKKTL 155

Query:   120 VFYRGRAAKGIKTDWMMHEFRLP 142
             VFY G+A KG +T W+M+E+RLP
Sbjct:   156 VFYSGKAPKGTRTSWIMNEYRLP 178

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 84/157 (53%), Positives = 112/157 (71%)

Query:    16 PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
             PGFRFHPTDEEL+ +YL+ +   +P P+ +I +VDIYK+DPW LP+    GE EWYF+ P
Sbjct:    11 PGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSP 70

Query:    76 RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWM 135
             R+RKY N  RPNR   +G+WKATGTD+ I+S  G+  +G+KK+LVFY+GR  KGIKTDW+
Sbjct:    71 RERKYPNGVRPNRAAVSGYWKATGTDKAIHS--GSSNVGVKKALVFYKGRPPKGIKTDWI 128

Query:   136 MHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKK 172
             MHE+RL   +  A  K+     +   D W +CRI+KK
Sbjct:   129 MHEYRLHD-SRKASTKRNGSMRL---DEWVLCRIYKK 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 91/191 (47%), Positives = 125/191 (65%)

Query:    16 PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
             PGFRFHPTDEELV  YL RK   + + + +I ++D+YKYDPW+LP LA  GEKEWYF+ P
Sbjct:     9 PGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSP 68

Query:    76 RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWM 135
             RDRKY N +RPNR  G+G+WKATG D+PI      K +G+KK+LVFY G+A KG KT+W+
Sbjct:    69 RDRKYPNGSRPNRSAGSGYWKATGADKPIGLP---KPVGIKKALVFYAGKAPKGEKTNWI 125

Query:   136 MHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNSMAQRALSHSWISPFPETAAS 195
             MHE+RL  +  S  +KK    ++  +D W +CRI+ K  +  +R        P P     
Sbjct:   126 MHEYRLADVDRSVRKKK---NSLRLDD-WVLCRIYNKKGATERRG------PPPPVVYGD 175

Query:   196 DILNQGARCTQ 206
             +I+ +  + T+
Sbjct:   176 EIMEEKPKVTE 186

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZVH0	FEZ_ARATH	No assigned EC number	0.5214	0.8090	0.7703	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	398
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	9e-77

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  233 bits (596), Expect = 9e-77
 Identities = 81/131 (61%), Positives = 106/131 (80%), Gaps = 3/131 (2%)

Query: 14  MLPGFRFHPTDEELVGFYLKRKIQHRPLPI-ELIKQVDIYKYDPWDLPK-LATAGEKEWY 71
           + PGFRFHPTDEELV +YLKRK+  +PLP+ ++I +VDIYK++PWDLP   A  G++EWY
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 72  FYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIK 131
           F+ PRDRKY N +R NR TG+G+WKATG D+P+ S  G + +G+KK+LVFY+GRA KG K
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGG-EVVGMKKTLVFYKGRAPKGEK 119

Query: 132 TDWMMHEFRLP 142
           TDW+MHE+RL 
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	398
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=5e-43  Score=302.95  Aligned_cols=128  Identities=55%  Similarity=1.141  Sum_probs=97.2

Q ss_pred             CCCCceeCCChHHHHHHHHHHHHhCCCCCc-CceeeccCCCCCCCCCcccccCCCceEEEEecccccccCCCCCceeccc
Q 015924           14 MLPGFRFHPTDEELVGFYLKRKIQHRPLPI-ELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRNSARPNRVTGA   92 (398)
Q Consensus        14 LPPGfRF~PTDEELV~~YL~rKi~g~pLp~-~~I~evDVY~~ePwdLP~~~~~ge~eWYFFspr~rK~~~G~R~nR~tgg   92 (398)
                      |||||||+|||||||.+||++|+.|.+++. .+|+++|||++|||+||+....++++||||+++++++.++.|.+|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            899999999999999999999999999888 7999999999999999964445677999999999999999999999999


Q ss_pred             ceeeccCCCccEEcCCCCeEEEEEEEEEEeecCCCCCCccCceEeeeecC
Q 015924           93 GFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLP  142 (398)
Q Consensus        93 GyWK~tG~~k~I~~~~G~~vIG~KKtLvFY~Grap~g~KT~WvMhEYrL~  142 (398)
                      |+||++|+.++|.+. ++++||+||+|+||.++.+++.||+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDP-GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE--TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeecccccccccc-cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999999999986 4589999999999998888999999999999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	398
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		4e-44
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		6e-44
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		6e-44

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 89/172 (51%), Positives = 118/172 (68%), Gaps = 11/172 (6%)
Query: 5   NEIDKIDDVMLP-GFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLA 63
            E D +  + LP GFRF+PTDEEL+  YL RK       ++LI ++D+YK+DPW LP  A
Sbjct: 7   QETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA 66
Query: 64  TAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYR 123
             GEKEWYF+ PRDRKY N +RPNRV G+G+WKATGTD+ I S++G + +G+KK+LVFY 
Sbjct: 67  LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-IISTEGQR-VGIKKALVFYI 124
Query: 124 GRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNS 175
           G+A KG KT+W+MHE+RL   +      KL        D W +CRI+KK +S
Sbjct: 125 GKAPKGTKTNWIMHEYRLIEPSRRNGSTKL--------DDWVLCRIYKKQSS 168

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 89/172 (51%), Positives = 118/172 (68%), Gaps = 11/172 (6%)
Query: 5   NEIDKIDDVMLP-GFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLA 63
            E D +  + LP GFRF+PTDEEL+  YL RK       ++LI ++D+YK+DPW LP  A
Sbjct: 10  QETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA 69
Query: 64  TAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYR 123
             GEKEWYF+ PRDRKY N +RPNRV G+G+WKATGTD+ I S++G + +G+KK+LVFY 
Sbjct: 70  LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-IISTEGQR-VGIKKALVFYI 127
Query: 124 GRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNS 175
           G+A KG KT+W+MHE+RL   +      KL        D W +CRI+KK +S
Sbjct: 128 GKAPKGTKTNWIMHEYRLIEPSRRNGSTKL--------DDWVLCRIYKKQSS 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 82/160 (51%), Positives = 111/160 (69%), Gaps = 5/160 (3%)
Query: 16  PGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCP 75
           PGFRFHPTD+ELV  YL RK   + LP+ +I +VD+YK+DPWDLP+ A  G +EWYF+ P
Sbjct: 17  PGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTP 76
Query: 76  RDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWM 135
           RDRKY N +RPNR  G G+WKATG D+P+  +   + +G+KK+LVFY G+A +G+KTDW+
Sbjct: 77  RDRKYPNGSRPNRAAGNGYWKATGADKPV--APRGRTLGIKKALVFYAGKAPRGVKTDWI 134
Query: 136 MHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNS 175
           MHE+RL     +A   K     +   D W +CR++ K N 
Sbjct: 135 MHEYRLADAGRAAAGAKKGSLRL---DDWVLCRLYNKKNE 171

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	398
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	4e-98
1ut7_A	171	No apical meristem protein; transcription regulati	6e-96
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  288 bits (740), Expect = 4e-98
 Identities = 87/176 (49%), Positives = 117/176 (66%), Gaps = 6/176 (3%)

Query: 1   MDDKNEIDKIDDVMLP-GFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDL 59
           M  + E D   ++ LP GFRFHPTD+ELV  YL RK   + LP+ +I +VD+YK+DPWDL
Sbjct: 1   MGMRRERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDL 60

Query: 60  PKLATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSL 119
           P+ A  G +EWYF+ PRDRKY N +RPNR  G G+WKATG D+P+      + +G+KK+L
Sbjct: 61  PERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP--RGRTLGIKKAL 118

Query: 120 VFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNS 175
           VFY G+A +G+KTDW+MHE+RL     +A   K   K     D W +CR++ K N 
Sbjct: 119 VFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAK---KGSLRLDDWVLCRLYNKKNE 171

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  283 bits (725), Expect = 6e-96
 Identities = 85/172 (49%), Positives = 112/172 (65%), Gaps = 11/172 (6%)

Query: 5   NEIDKIDDVMLP-GFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLA 63
            E D +  + LP GFRF+PTDEEL+  YL RK       ++LI ++D+YK+DPW LP  A
Sbjct: 7   QETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA 66

Query: 64  TAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYR 123
             GEKEWYF+ PRDRKY N +RPNRV G+G+WKATGTD+ I +    + +G+KK+LVFY 
Sbjct: 67  LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYI 124

Query: 124 GRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKKTNS 175
           G+A KG KT+W+MHE+RL                    D W +CRI+KK +S
Sbjct: 125 GKAPKGTKTNWIMHEYRLIE--------PSRRNGSTKLDDWVLCRIYKKQSS 168

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 8e-04
 Identities = 75/415 (18%), Positives = 113/415 (27%), Gaps = 111/415 (26%)

Query: 1   MD-DKNEID----KIDDVMLPGFR----FHPTDEELVGFYLKRKIQH---RPLPIE---- 44
           MD +  E       I  V    F          +       K +I H       +     
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66

Query: 45  -----LIKQVDIYK----------YDPWDLPKLAT-----AGEKEWYFYCPRDRKYRNS- 83
                L KQ ++ +          Y  + +  + T     +     Y    RDR Y ++ 
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINY-KFLMSPIKTEQRQPSMMTRMYIEQ-RDRLYNDNQ 124

Query: 84  -------ARPNRVTGAGFWKATGTDRP-----IYSSDGTKCIGLKKSLVFYRGRAAKGIK 131
                  +R          +A    RP     I    G    G K  +           K
Sbjct: 125 VFAKYNVSRLQPYLKLR--QALLELRPAKNVLID---GVLGSG-KTWVA---LDVCLSYK 175

Query: 132 TD--------WM-MHEFRLPSLTYSAPQKKLLDKTIPPNDAWA--ICRIFKKTNSMAQRA 180
                     W+ +     P        +KLL +  P   + +     I  + +S  Q  
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVL-EMLQKLLYQIDPNWTSRSDHSSNIKLRIHS-IQAE 233

Query: 181 LSHSWIS-PFPETAASDILN--QGARCTQ-FSSENVSC----TTEIGSVIQLCGNNDLQQ 232
           L     S P+       +L   Q A+    F   N+SC    TT    V      + L  
Sbjct: 234 LRRLLKSKPYEN--CLLVLLNVQNAKAWNAF---NLSCKILLTTRFKQVT-----DFLSA 283

Query: 233 ASTTSFSAFDIPTYKPLYPP-----LYK------PSLPP-ASTGDLRNNFMFLPPEFSGP 280
           A+TT  S         L P      L K        LP    T + R   +    E    
Sbjct: 284 ATTTHISLDHHS--MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII--AESIRD 339

Query: 281 NECTNDAPSMLPNTAIFENIIKGSENNIEVEGQQQQSRGFSISVPQDMQGNITME 335
              T D      N      II+ S N +E    ++     S+  P     +I   
Sbjct: 340 GLATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSA--HIPTI 390

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	398
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.7e-55  Score=401.87  Aligned_cols=167  Identities=49%  Similarity=1.019  Sum_probs=135.6

Q ss_pred             ccccccccCCCCCCCceeCCChHHHHHHHHHHHHhCCCCCcCceeeccCCCCCCCCCcccccCCCceEEEEecccccccC
Q 015924            3 DKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKYRN   82 (398)
Q Consensus         3 e~~~m~k~~~~LPPGfRF~PTDEELV~~YL~rKi~g~pLp~~~I~evDVY~~ePwdLP~~~~~ge~eWYFFspr~rK~~~   82 (398)
                      .+++++ ....|||||||||||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..++.+||||++|++||++
T Consensus         5 ~~~~~~-~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~   83 (174)
T 3ulx_A            5 RERDAE-AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPN   83 (174)
T ss_dssp             ----CC-STTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC----
T ss_pred             cccccc-cccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCC
Confidence            344444 3467999999999999999999999999999999999999999999999999877888999999999999999


Q ss_pred             CCCCceecccceeeccCCCccEEcCCCCeEEEEEEEEEEeecCCCCCCccCceEeeeecCCCCCCCcccccccCCCCCCC
Q 015924           83 SARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPND  162 (398)
Q Consensus        83 G~R~nR~tggGyWK~tG~~k~I~~~~G~~vIG~KKtLvFY~Grap~g~KT~WvMhEYrL~~~~~~s~~~~~~~~~~~~~d  162 (398)
                      |.|++|++++||||++|++++|...  +++||+||+|+||.|+++++.||+|+||||+|......+...   .......+
T Consensus        84 g~R~nR~t~~G~WkatG~dk~I~~~--g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~---~~~~~~~~  158 (174)
T 3ulx_A           84 GSRPNRAAGNGYWKATGADKPVAPR--GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGA---KKGSLRLD  158 (174)
T ss_dssp             -CCSCEEETTEEEEECSCCEEECCS--SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC--------------CCS
T ss_pred             CCCceeecCCceEccCCCCcEEeeC--CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCccccc---ccCCCCCC
Confidence            9999999999999999999999864  489999999999999999999999999999998643221100   11112467


Q ss_pred             ceEEEEEEecCCc
Q 015924          163 AWAICRIFKKTNS  175 (398)
Q Consensus       163 d~VLCRIykK~~s  175 (398)
                      +|||||||+|++.
T Consensus       159 ~wVlCrvf~K~~~  171 (174)
T 3ulx_A          159 DWVLCRLYNKKNE  171 (174)
T ss_dssp             SEEEEEEEESCC-
T ss_pred             CEEEEEEEEcCCC
Confidence            9999999999864

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2.1e-55  Score=400.14  Aligned_cols=166  Identities=50%  Similarity=0.925  Sum_probs=134.5

Q ss_pred             CCccccccccCCCCCCCceeCCChHHHHHHHHHHHHhCCCCCcCceeeccCCCCCCCCCcccccCCCceEEEEecccccc
Q 015924            1 MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKY   80 (398)
Q Consensus         1 M~e~~~m~k~~~~LPPGfRF~PTDEELV~~YL~rKi~g~pLp~~~I~evDVY~~ePwdLP~~~~~ge~eWYFFspr~rK~   80 (398)
                      |+.++.-......|||||||||||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..++.+||||+++++||
T Consensus         4 m~~~~~~~~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~   83 (171)
T 1ut7_A            4 MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKY   83 (171)
T ss_dssp             CCCC----CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC--
T ss_pred             cccccCCcccccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEecccccc
Confidence            66665444455789999999999999999999999999999999999999999999999998778899999999999999


Q ss_pred             cCCCCCceecccceeeccCCCccEEcCCCCeEEEEEEEEEEeecCCCCCCccCceEeeeecCCCCCCCcccccccCCCCC
Q 015924           81 RNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPP  160 (398)
Q Consensus        81 ~~G~R~nR~tggGyWK~tG~~k~I~~~~G~~vIG~KKtLvFY~Grap~g~KT~WvMhEYrL~~~~~~s~~~~~~~~~~~~  160 (398)
                      ++|.|++|++++||||++|++++|...  +++||+||+|+||+|+++++.||+|+||||+|.....        ......
T Consensus        84 ~~g~R~~R~t~~G~Wk~tG~~k~I~~~--~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~--------~~~~~~  153 (171)
T 1ut7_A           84 PNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR--------RNGSTK  153 (171)
T ss_dssp             -----CCEEETTEEEEEEEEEEEEEET--TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC---------------
T ss_pred             CCCCcccccCCCCEEeccCCCceEEec--CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCcc--------ccCccc
Confidence            999999999999999999999999873  4899999999999999999999999999999986421        011234


Q ss_pred             CCceEEEEEEecCCch
Q 015924          161 NDAWAICRIFKKTNSM  176 (398)
Q Consensus       161 ~dd~VLCRIykK~~s~  176 (398)
                      .++|||||||+|+++.
T Consensus       154 ~~~~VlCrv~~k~~~~  169 (171)
T 1ut7_A          154 LDDWVLCRIYKKQSSA  169 (171)
T ss_dssp             -CCEEEEEEEECC---
T ss_pred             CCCEEEEEEEEcCCCC
Confidence            6799999999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	398
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-68

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  212 bits (540), Expect = 1e-68
 Identities = 84/168 (50%), Positives = 110/168 (65%), Gaps = 11/168 (6%)

Query: 6   EIDKIDDVMLP-GFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLAT 64
           E D +  + LP GFRF+PTDEEL+  YL RK       ++LI ++D+YK+DPW LP  A 
Sbjct: 8   ETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL 67

Query: 65  AGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRG 124
            GEKEWYF+ PRDRKY N +RPNRV G+G+WKATGTD+ I +    + +G+KK+LVFY G
Sbjct: 68  FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIG 125

Query: 125 RAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPPNDAWAICRIFKK 172
           +A KG KT+W+MHE+RL                    D W +CRI+KK
Sbjct: 126 KAPKGTKTNWIMHEYRLIE--------PSRRNGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	398
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-52  Score=376.24  Aligned_cols=163  Identities=50%  Similarity=0.935  Sum_probs=132.1

Q ss_pred             CCccccccccCCCCCCCceeCCChHHHHHHHHHHHHhCCCCCcCceeeccCCCCCCCCCcccccCCCceEEEEecccccc
Q 015924            1 MDDKNEIDKIDDVMLPGFRFHPTDEELVGFYLKRKIQHRPLPIELIKQVDIYKYDPWDLPKLATAGEKEWYFYCPRDRKY   80 (398)
Q Consensus         1 M~e~~~m~k~~~~LPPGfRF~PTDEELV~~YL~rKi~g~pLp~~~I~evDVY~~ePwdLP~~~~~ge~eWYFFspr~rK~   80 (398)
                      |+.++.--.....|||||||+|||||||.|||++|+.|.|++.++|+++|||++|||+||+....++++||||+++++++
T Consensus         4 ~~~~~~~~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~   83 (166)
T d1ut7a_           4 MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKY   83 (166)
T ss_dssp             CCCC----CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC--
T ss_pred             ccccccCccccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeecccc
Confidence            66666444444569999999999999999999999999999999999999999999999987777889999999999999


Q ss_pred             cCCCCCceecccceeeccCCCccEEcCCCCeEEEEEEEEEEeecCCCCCCccCceEeeeecCCCCCCCcccccccCCCCC
Q 015924           81 RNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLTYSAPQKKLLDKTIPP  160 (398)
Q Consensus        81 ~~G~R~nR~tggGyWK~tG~~k~I~~~~G~~vIG~KKtLvFY~Grap~g~KT~WvMhEYrL~~~~~~s~~~~~~~~~~~~  160 (398)
                      ++|.|.+|++++|+||++|+++.|.+  ++++||+||+|+||+++++++.||+|+||||+|.+....        .....
T Consensus        84 ~~g~r~~R~~g~G~Wk~~g~~~~i~~--~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~--------~~~~~  153 (166)
T d1ut7a_          84 PNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR--------NGSTK  153 (166)
T ss_dssp             -----CCEEETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC---------------
T ss_pred             CCCCccccccCCCEecccCCCceEec--CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccc--------cCccc
Confidence            99999999999999999999998875  358999999999999999999999999999999864321        12234


Q ss_pred             CCceEEEEEEecC
Q 015924          161 NDAWAICRIFKKT  173 (398)
Q Consensus       161 ~dd~VLCRIykK~  173 (398)
                      .++|||||||+|+
T Consensus       154 ~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         154 LDDWVLCRIYKKQ  166 (166)
T ss_dssp             -CCEEEEEEEECC
T ss_pred             cCCEEEEEEEecC
Confidence            6789999999985